>input_sequence_60378
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-----------------------------------------------------ATGGGCGTCGGCCCTTCCGT---CG--
-ACGGCGGCGACACCACGGCGGTGACGGGATCCATCAGCGAGGTGCCCAAGGTGTCCGGCACCCACGAGTTCACGATCCG
CGAGTACAGCCGCACCAAGGGCATGGGCGTGGGCAAGTCGATCCTGTCTCAGTACTTCTCCGTCGACGGCCGCCGCTGGT
ACATCCGCTTCTACCCGGACGGCTACAGCACGGCCGACGGCGCCTGGGTCGCCTTCTACGCGCAGACGCTCTACAAGCCG
CAGTTCCGCCCCGTGCGCGCCGAGTTCACCTTCCAGCTCCTCGGCCCCAACGGCGACGTCCGCCACACGCGCCGGTCCGA
TCGCGCCTGCAAGTACGACACCTTCTGCAACAGCTGGGGCATCCGCCGCTACATCACCCGGGAGCAGCTTGAGAGCGCCG
CGCTCGGCGCCATCCACGCCGACTCCATCACCGTCCGCTGCACCGTCACGATCCACCTGGCGCGGAGGAGGAGCCTCGCC
ATCAACCGCCCGGGCCCCGTCCAGATGCCGCCGCCGCCGCCGTCCAACCACGGGGAGAACGCCCTCAGGTTCCTCGCCGG
CGGGAAGGCCCCCTTCGACGTGCGCTTCGACGTGGACGGCGAGATCTTCGAGGCGCACCGGATGGTGGTGGCCGCGCAGT
CGGCATGGTTCGAGAGCCTCCTCTACGGCCACGGCCGCGAGGCGG------GCAAGGACGTC---CTCGAGGTCGGCGGC
GGCATTGTCACCCCGGAGGCGTTCCGGGGCGTGCTCCACTTCATCTACACCGACGAGCTGCCTCCCGAGGCCGCC-----
-------AAGGGGAGGGGGTCGTACGACCTGACGCTGCGGCTGTTCGAGGCGGCCGACTACTACCTCATCGAGAGGCTGA
AGCTGATGTGCGCGTGCAGGCTGGGCGACTTCATCAAGGACTCCACCGTGGACGCGCTCATGGAGATCGCGGAGGACTAC
TCGTGCAAGGACCTCGCGCAGGCGTGCCGGAACTTCGCGGCGCGCAGGGGCCTGAGTTTGGCA-----------------
-------GCGATAAAGAGGAGATTATTGTCCA---GCGGCGCTGCTCCGGCGACGAGGAGGATCATGGACGTGCCGGCGC
CGTCGACGAGCG--GCTGA-------------------------------------------------------------
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---
>chr2A_1_TraesCS2A01G500000
CGGCAACTTTGGCATTGATTCGCCGCGGGAAACGAGGCGATGAGGACAATGAAGGGGCGAGAAGAGGGTAGAGTCGCTGA
CGCGGCGGGCCCGCGGCTGTTTCGCGCCAAAACAGTTCGCCCCGGCGCCCCCGGGCGCCCCCCAGCGCGCCGGGTTCGGC
CTGGGTCCGCCGGCGCTGTTTTCGGCCCAAGCCGGCGAAAATCGGGCTCCTGGGGGCGCGACTGGGCCGATTTTTCGGCG
CCGGTGCAAAAACAAACGCCTGGGGAGGCCTTCCTAGGGGCGCGGCTGGAGATGCCCTTACCCGGCGAGTGCGAGATCGG
CGGCGACCTTAGGCCTGGTACAATGGGAGATATTTAGGGGAGATACTTAGAAAAATAAACTAGGCTTTTTTTAAGCGTCG
GCGTTTATTTGTACAAGATAAACGCTTAATTAAGCATTTTTTTTATAAAAATGTGCACCGGTAGAAAAACTCGATTTATT
TTTCTAAGCACCTCTCATTGTATAAGGACGTTTTGTACTTGCATGATGCACCATGCACGGTCGGCGTAGCCGTGACTGTA
GAGGCATCAGTCACGTAAACACTCTTTTTAGGGAGATTCACGTAAAGATAAAGACTTTAGAAAATAATAATTCACGTAAA
GACTTGATGCACACAC--AAAAAAAGTAAAGACTTGATGCGCGTGTGATATAGCTAGGCTTTTAATAAA-TTTTATTCGA
ACTGGGAAACAGGTACA----TACACGGCGATCGCATACACGGCTCCTGATTTACGTAGGAAACCAACCGAACTCGTCAT
GCAAGCGAAGTTGTAACGTGATT-ATCTCCTAAAAGAAAAAAAGTTGTAACGTGATTATATTATCGCGTA-----GTACG
GGTTAGAGACCCACCCGAATTAGATTAATCACCTGGGCCCTCTTATATACTCAACCCTTAGTTAACAACCTCCTAATCTA
ATCTGATCAAAACCTCGACAGCTTTTTCTAAACCCTAGACAGATCCGTTCGACATGGGCGTCGGCCCTTCCGT---CG--
-ACGGCGGCGACACCACGGCGGTGACGGGATCCATCAGCGAGGTGCCCAAGGTGTCCGGCACCCACGAGTTCACGATCCG
CGAGTACAGCCGCACCAAGGGCATGGGCGTGGGCAAGTCGATCCTGTCTCAGTACTTCTCCGTCGACGGCCGCCGCTGGT
ACATCCGCTTCTACCCGGACGGCTACAGCACGGCCGACGGCGCCTGGGTCGCCTTCTACGCGCAGACGCTCTACAAGCCG
CAGTTCCGCCCCGTGCGCGCCGAGTTCACCTTCCAGCTCCTCGGCCCCAACGGCGACGTCCGCCACACGCGCCGGTCCGA
TCGCGCCTGCAAGTACGACACCTTCTGCAACAGCTGGGGCATCCGCCGCTACATCACCCGGGAGCAGCTTGAGAGCGCCG
CGCTCGGCGCCATCCACGCCGACTCCATCACCGTCCGCTGCACCGTCACGATCCACCTGGCGCGGAGGAGGAGCCTCGCC
ATCAACCGCCCGGGCCCCGTCCAGATGCCGCCGCCGCCGCCGTCCAACCACGGGGAGAACGCCCTCAGGTTCCTCGCCGG
CGGGAAGGCCCCCTTCGACGTGCGCTTCGACGTGGACGGCGAGATCTTCGAGGCGCACCGGATGGTGGTGGCCGCGCAGT
CGGCATGGTTCGAGAGCCTCCTCTACGGCCACGGCCGCGAGGCGG------GCAAGGACGTC---CTCGAGGTCGGCGGC
GGCATTGTCACCCCGGAGGCGTTCCGGGGCGTGCTCCACTTCATCTACACCGACGAGCTGCCTCCCGAGGCCGCC-----
-------AAGGGGAGGGGGTCGTACGACCTGACGCTGCGGCTGTTCGAGGCGGCCGACTACTACCTCATCGAGAGGCTGA
AGCTGATGTGCGCGTGCAGGCTGGGCGACTTCATCAAGGACTCCACCGTGGACGCGCTCATGGAGATCGCGGAGGACTAC
TCGTGCAAGGACCTCGCGCAGGCGTGCCGGAACTTCGCGGCGCGCAGGGGCCTGAGTTTGGCA-----------------
-------GCGATAAAGAGGAGATTATTGTCCA---GCGGCGCTGCTCCGGCGACGAGGAGGATCATGGACGTGCCGGCGC
CGTCGACGAGCG--GCTGAGTGAAATTTTCTTGTGCATGCA----TGCA--TGTGGTACGTATACTTAGTATCTAGGGTA
ATCTCTCGGACTACATATATATTATAGCGTGGGTTGTATAATGCTGATCGATATAGC----TTTGTTTTCTGCTGGAAGG
TCGAATTTTA-TAGTTTATTAGGTTATTGGTGTGCTGAAGTACTGTTTATACTCCATACTCCATAGTACTATTTAAGCAA
GAGTCCAGTTTATGATAGACGCCTCTC--------TCATCGTCGTGAGAAAGAATTTGATATACCTT-TGTAGTTAGGTT
ATTGGTCATATCCACAAAATTTGATTGCCTTGAGTTTGCACTTTACACTACCCATGATATAGGGCTGGAAAAAAAGCTCG
AAGCTCGCGAGCTAAACGAGTAGCTCGTGACTCGGCTCGAATCGACTCAAACTCGAAGAATAATGAGTCGAGCCAAGCTT
TAGTTTAAGATCGTTTATAGACCAAGTTAAACGAGCCAATCTCACGAGTACTCGTGTAACTCGTTAGGCTCGGTACAAAA
GATCAGCCACTCTCAATACAAAAAAAGATAAGCCACTCAGCATCCTACGTTCCAGACGCACAACACAAGGCCCAGCCATT
GAAGACCCACCCGCCTAGGAGACTCATGCATTACAAGGAAATTACAATTGTTTAGTGATATATATGTTTAATATATACAT
AATCA-TTTTTTATCATTTTGAGGGTTTTATGTTCATATCTTTAACGAGCTTAACAAGCTAAACGAACCAGCTCGCGAGT
TATACGAGTCGAGTCAATCCTGGGTTTAAGCTCGTTATAATAACGAGTCGAGTCGAGCTAGCTCGTTAGCGAAACGAGCT
CTAGCGAGTCGAGCCGAGCTGGCTCGACTCGGCTCGAATTCCAGCCCTACATGATATGTAAGAATTTGCTTT---CATGT
TCTTGGTTTTCGTCGGCGTTTTCGCTGGGTTATGAACTTTGCTCTATTGTTCTTTTCAAAACCTGTCACTATTTGTCGCT
TAA
>chr2B_567
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------TCAGTCACGTAAACACTCTTTTTAGG-AGATTCACGTAAAGA------CTTTAAAAAATAATAATTCACGTAAA
GACTTGATGCACACAAAAAAAAAGAGTAAAGACTTGATGCATGTGATA------TAGGCTTTTAATAATTTTTTATTTAA
ACTGGAAAACAGGTACATGCATACACGGCGATCGCATACACGGCTCCTGATTTACGTAGGAGACCAACCGAAC-------
GCAAGCGAAGTTGTAACGTGATTTATCCACT-----AAAAGAAATTGTAACGTGATTATT-----GCGTAGTACGGTACG
AGTTAGAGACCCACCCGAATTAGATTAATCACCTGGGCCCTCTTATATACTCAACCCTTAGTTAACAACCTCCTAATCTA
ATCTGATCAAAACCTCAACAGCCTTTTCTAAACCCTAGACAGATCCGTTCGATATGGGCGTCGGCCCTTCCGT---CGCC
GACGGCGGCGACACCACGGCGGTGACGGGGTCCATCAGCGAGGTGCCCAAGATATCCGGCACCCACGAGTTCACGATCCG
CGAGTACAGCCGCACCAAGGGCATGGGCGTGGGCAAGTCGATCCTGTCGCAGTACTTCTCCGTCGACGGCCGCCGGTGGT
ACATCCGCTTCTACCCGGACGGCTACAGCACGGCCGACGGCGCCTGGATCGCCTTCTACGCGCAGACGCTCTACAAGCCG
CAGTTCCGCCCCGTGCGCGCCGAGTTCACGTTCCAGCTCCTCGGCCCCAACGGCGACGTCCGCCACACGCGCCGATCCGA
TCGGGCCTGCAAGTACGACACCTTCTGCAACAGCTGGGGCATCCGCCGCTACATCACCCGGGAGCAGCTCGAGAGCGCGG
CGCTCGGCGCCATCCACGCCGACTCCATCACCGTGCGCTGCACCGTCACGATCCACCTAGCGCGGAGGAGGAGCCTCGCG
ATCAACCGCCCGGGCCTCGTCCAGATGCCGCCGCCACCGCCGTCGAACCACGGGGAGAACTCCCTCAGGTTCCTCGCCGG
CGGGAAGGCCCCCTTTGACGTGCGCTTCGACGTGGACGGCGAGATCTTCGAGGCGCACCGGATGGTGGTGGCCGCGCAGT
CGGCGTGGTTCGAGAGCCTCCTCTACGGCCACGGCCGCGAGGCCG------GGAAGGACGTC---TTCGAAGTCGGCGGC
GGCATTGTCACCGCGGAGGCGTTCCGTGGCGTGCTCCACTTCATCTACACCGACGAGCTGCCCCCAGAGGCCGCC-----
-------AAGGGGAGGGGGTCGTACGACCTGACGCTGCGGCTGTTCGAGGCGGCCGACTACTACCTCATCGAGAGGCTGA
AGCTGATGTGCGCGTGCAGGCTGGGCGACTTCATCAAGGACTCCACCGTGGACGCGCTCATGGTGATCGCGGAGGACTAC
TCGTGCAAGGACCTCGCGCAGGCGTGCCGGAACTTCGCGGCGCGCAGGGGCCTGAGTTTGGCA-----------------
-------GCGATAAAGAGGAGATTAGTGTCCA------GCGCTGCTCCGGCGACGAGGAGGATCATGGACGTGCCGGCTC
CGTCGACGAGCG--GCTGAGTGAAATTTTCTTGTGCGTGCATGCATGCATGTGGGGTACGTATACTTAGTA----GGGTA
ATCTATCGGACTAC--ATATATTATAGCGTGGGTTGTATAATGCTGATCGATATAGCTAGTTTTGTTTTCTGTTGGAAGG
TCGAA-TTTA-TAGTTAATTAGGTTATTGGTGTGCTGAAGTACTGTTCATACTCCATACTCCATAGTATA--TTAAGCAA
GAGTCCAGTTTATGACAGTTGCCTCTGTTATCGTGTCATCGTCGTGAGAAAGAATTTGATACC---T-TGTAGTTAGGCT
ATTGGTCATATCCACAA--TTTGATTGCCTTGAGTTTGCACTTTACACTACCCATGATA---------------------
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--------------------------------------------------------TGTAAGAATTTGCTTT---GATGT
TCTTGGATTTCGTGGATGTGTTT------TTATGAAC-TTGCTCTATTGTTCTTTTCAAAACCTGTCACTATTTTTCGCT
AAA
>chr2D_792
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------------------------------------------------------------------------------AT
GCAAGCGAAGTTGTAACGTGATT-ATCCCTA-----AAAAAAAGTTGTAACGTAATTATT-----GCGTA-----GTACG
GGTTAGAGACCCGCCCGAATTAGATTAATCACCTGGGCCCTCTTATATACTCAACCCTTAGTTAACAACCTCCTAATCTA
ATCTGATCAAAACCTCAACAGCCTTTTCTAAACCCTAGACAGATCCGTTCGACATGGGCGTCGGCCCTTCCGT---CGCC
GACGGCGGCGACACCACGGCGGTGACGGGGTCCATCAGCGAGGTGCCCAAGGTGTCCGGCACCCACGAGTTCACGATCCG
CGAGTACAGCCGCACCAAGGGCATGGGCGTGGGCAAGTCGATCCTGTCGCAGTACTTCTCCGTCGACGGCCGCCGCTGGT
ACATCCGCTTCTACCCGGACGGCTACAGCACGGCCGACGGCGCGTGGGTCGCCTTCTACGCGCAGACGCTCTACAAGCCG
CAGTTCCGCCCCGTGCGCGCCGAGTTCACCTTCCAGCTCCTCGGCCCCAACGGCGACGTCCGCCACACGCGCCGCTCAGA
TCGCGCCTGCAAGTACGACACCTTCTGCAACAGCTGGGGCATCCGCCGCTACATCACCCGGGAGCAGCTCGAGAGCGCGG
CGCTCGGCGCCATCCACGCCGACTCCATCACCGTGCGCTGCACCGTCACGATCCACCTGGCGCGGAGGAGGAGCCTCGCG
ATCAACCGCCCGGGCCTCGTCCAGATGCCGCCGCCGCCGCCGTCCAACCACGGGGAGAACGCCCTCAGGTTCCTCGCCGG
CGGGAAGGCCCCCTTCGACGTGCGCTTCGACGTGGACGGCGAGATCTTCGAGGCGCACCGGATGGTGGTGGCCGCGCAGT
CGGCGTGGTTCGAGAGCCTCCTCTACGGCCACGGCCGCGAGGCGG------GCAAGGACGTC---CTCGAGGTCGGCGGC
GGCATTGTCACCGCGGAGGCGTTCCGGGGCGTGCTCCACTTCATCTACACCGACGAGCTGCCCCCCGAGGCCGCC-----
-------AAGGGGAGGGGGTCGTACGACCTGACGCTGCGGCTGTTCGAGGCGGCCGACTACTACCTCATCGAGAGGCTGA
AGCTGATGTGCGCGTGCAGGCTGGGCGACTTCATCAAGGACTCCACCGTGGACGAGCTCATGGAGATCGCGGAGGACTAC
TCGTGCAAGGACCTCGGGCAGGCGTGCCGGAACTTCGCGGCGCGCAGGGGCCTGAGTTTGGCA-----------------
-------GCGATAAAGAGGAGATTATTGTCCA---GCGGCGCTGCTCCGGCGACGAGGAGGATCATGGACGTGCCGGCTC
CGTCGACGAGCG--GCTGAGTGAAATTTTCTTGTGCATGCATGCATGCA--TGTGGTACGTATACTTAGTA----GGGTA
ATCTGTCGGACTAC--ATATATTATAGCGTGGGTTGTATAATGCTGATCGCGATA--TAGCTTTGTTTTCTGTTCGAAGG
TCGAA-TTTTGTAGTTAATTAGGTTATTGGTGTGCTGAATTTCTGTTTATACTCCATACTCCATAGTATA--TTAAGCAA
GGGTCCAGTTTATGATAGTTGCCTCGGTCGTCGTGTCATCGTCGTGAGAAAGAATTTGATACC---TGTGTAGTTAGGCT
ATTGGTCATGTCTACAA--TTTGATTGCCTTGAGTTTGCACTTTACACTACGCGTGATA---------------------
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--------------------------------------------------------TGTAAGAATTTGCTTTCACGTTGT
TCTTGGTTTTCGTTGTTCTTTTCGCTGGGTTATGAAC-TTGCTCTATTGTTCTTTTCAAAACCTGTCCTTATTTGTCGCT
TAA
>chr2B_981
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---------------------------------CCTAAACAGCCCGGATCGATATGGCAGCCGCCCCTTCCGTTGCCG--
-ACGGCCGCGATCTCACGGCGGTGACGGGCTCGCTGAGCGAGGTGCCAAAGGTGACGGGCACGCACGAGTTCACGATTCG
CGAGTACAGCCGTACCAAGGGCATGGGCGTGGGCAAGTCGGTCGTGTCGCAGCACTTCTCCGTCGATGGCCGGCGGTGGC
ACATCCGGTTCTACCCGGACGGCTACAGCACGGCGGACGGCGGATGGATCGCCTTGTACGCGCAGACGCTCCACAAGCCG
CAGCTCCGCCCCGTGAGCGCCGAGTTCACCTTCCAGCTCCTCGGCCCCGACGGCGACGTCCGGCACACGCGCCGGTCCGA
CCGGGCCTGCAAGTACGACACCATGTGCAACAGCTGGGGCATCCGGCGCTACATCACCCGGGCGCACCTCGAGAGCGCGG
CGCTTGGCGCCATCCACGCCGACTCCATCACCGTGTGCTGCACCGTGACGATCCACAAGGCGCGGAGGAGGAGCCTCGCC
GTGAACCGCCCGGGGCTCGTGAAGATGCCGCCGCCGCCGCCGTCGAGCCACGGGGAGAACGCCATCAGGTTCCTCGCCCG
CGGGAAGGTCCCCTTCGACGTGCGGTTCGAGGTGGAGGGCGAGGTGTTCGAGGCGCACCGGATGGTGGTGGCCGCGCAGT
CGCCGTGGTTCGAGGGCCTCCTCTACGGCCACGGCCGCGAGGCGGCCACGGGGAAGGACGTGCTGCTCCAAGTAGGCGGC
GGCATCGTCACGGCGGAGGCGTTCAGGGGCGTGCTCCACTTCATCTACACCGACGAGCTCCCCGGCGAGGCCACCGCCAA
GGGGAGGAAGGGGAGGGGGTCGTACGACGTGACGCTGCGGCTGTTGGAGGCCGCCGACTACTACCTGATGGAGAGGCTGA
AGCTGATGTGCGCGTGCAGGCTGGGCGACTTGATCAAGGACTCCACCGTGGAGACTCTGATGGAGACCGCGGAGGTCTAC
TCGTGCAAAGACCTCGAGCAGGCGTGCCGGAACTACGCGGCTCGCAGGGGGCTGAGATTGCTGCCAAACCTAGAAAACAT
ACAGAGCGCCATAAGGAAGAGATTAACGTCCA---GCGCCGTTGCTCCGGCGACGAGGAGGATCATGGACGTGGCA----
--TCGACGAGTGGCGCTGAGTGAAGTTTTTGTGTGTGTGCATGCAT----------------------------------
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>chr2D_1021
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----------------------------------------------------------------------------CG--
-ACGGCCGCAATGTCACGGCGGTGACGGGGGCGGTGAGCGAGGTGCCGATGGTGACGGGCACGCATGAGTTCACGATTCG
CGAGTACAGCCGTACCAAGGGCATGGGCGTCGGCAAGTCGATCCTGTCGCAGCACTTCTCCGTCGATGGCCGCCGGTGGC
ACATCCGCTTCTACCCGGACGGCTACAGCACGGCGGATGGCGGGTGGATCGCCTTGTACGCGCAGACGCTCCACAAGCCG
CAGTTCCGGCCCGTGAGCGCCGAGTTCACCTTCCAGCTCCTCGGCCCCGACGGCGACGTCCGCCACACGCGGCGGTCCGA
CCGGGCCTGCAAGTACGACACCTTGTGCAGCAGCTGGGGCATCCGGCGCTACATCACCCGGGCGCACCTCGAGAGCGCGG
CGCTGGGCGCCATCCACGCCGACTCCATCACCGTGCGCTGCACCGTGACGATCCACAAGGCGCGGAGGAGGAGCCTCGCC
GTCAACCGCCCGGGCCTCGTCAAGATGCCACCGCCGCCGCCGTCGAACCACGGGGAGAACGCCATCCGGTTCCTCGCCGG
CAGGAAGGCCCCCTTCGACGTGCGGTTCGAGGTGGACGGCGAGGTGTTCGAGGCGCACCGGATGGTGGTGGCCGCGCAGT
CGTCGTGGTTGGAGGGCCTCCTCTACGGCCACGGCCGCGAGGCGG------GGAAAGATCTACTGCTCGAAGTAGGCGGC
GGCATTGTCACCGCGGAGGCGTTCAGGGGCGTGCTCCACTTCATCTACACCGACGAGCTCCCCGGCGATGCGACC-----
-------AAGGGGCGGGGGTCGTACGATGTGACGCTGCGGCTGTTCGAGGCCGCCGACTACTACCTGATCGACAGGCTGA
AGCTGATGTGCGCGTGCAGGCTGGGCGACTTCATCAAGGACTCCACCGTGGATACGCTCATGGAGATCGCGGAGGCCTAC
TCGTGCAAGGACCTCCAGGAGGCGTGCCGGAACTTCGCGGCGTGCAGGGGGTTGAGATTGCTGCCTAACCTAGGAAACAT
ACAGAGCGCGATAAGGAAGAGGTTAACGTCCAGCGGCGCCGCTGCTCCGGCGACGAGGAGGATCATGGAC----------
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>chr2A_1030
CGACGG--------------------------------------------------------------------------
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--------------CACGGCGGTGACGGGGTCGGTGAGCGAGGTGCCCAAGGTGACGGGCACGCATGACTTCACGATCTG
CGAGTACAGCCGTACCAAGGGCATTGGCGTCGGCAAGTCGATCCTGTCGCAGCACTTCTCCGTCGATGGCCGGCGGTGGC
ACATCCGCTTCTATCCGGACGGCTACAGCACGGCGGACGGCGGGTGGATCGCCTTGTACGCGCAGACGCTCCACAAGCCG
CAGTTCCTTCCCGTGAGCGCCGAGTTCACCTTCCAGCTCCTCGGCCCCGACGGCGACGTCCGCCCCACGCGGCGGTCCGA
CCGGGCCTGCAAGTACGACACCTTGTGCAACAGCTGGGGCATCCGGCGCTACATCACCCGGGCGCACCTCGAGAGCGCGG
CGCTGGGCGCCATCC--------------------------------ACGATCCACAAGGCGCGGAGGAGGAGCCTCTCC
GTCAACCGCCCGGGGCTCGTCAAGATGCCGCCGCCGCCGCTGTCGAACCACGGGGAGAACGCCATCCGGTTCCTGGCCAG
CGGGAAGGCCCCGTTCGACGTGCGGATCGAGGTGGACGGCGAGGTGTTCGAGGCGCACCGGATGGTGGTGGCCGCGCAGT
CGGCGTGGTTCGAAGGCCTCCTCTACGGCCACGGCCGCGAGGCGG------GGAAAGATCTACTGCTCGAAGTAGGCGGC
GGCATCGTCACCGCGGAGGCGTTCAGGGGCGTGCTCCACTTCATCTACACGGACGAGATCCCCGGCGAGGCCGCC-----
-------AAGGGGAGGGGGTCGTACGACGTGACGCTGCGGCTGTTGGTGGCCGCCGAATACTACCTCATCGACAGGCTGA
AGCTGATGTGCGCGTGCAGGCTGGGCGACTTCATCAAGGACTCCACCGTGGGCACGCTCATGGAGATCGCGGAGGCCTAC
TCGTGCAAGGACCTCGAGCAGGCGTGCCGGAACTTCGCGGCGCGCAGAGGGCTGAGATTGCTGCCTAACCTAGCAAACAT
ACAGAGCGCGATAAGGAAGAGGTTAACGTCCAGCGGCGCCGCTGCTCCGGCGACGAGGAGGATCATGGACGTG-------
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>chr1B_2446
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------------------------------------------------------TGAAATAGGGCTGGAAAAAAAGCTCG
AAGCTCGCGAGCTAAACGAGTAGCTCGTGACTCGGCTCGAATTGACTCGAACTCGAAGAATAACGAGTCGAGCCGAGCTT
TAGTTTAAGATCGTTTATAGACCAAGTTAAATGAGCCAATCTCACGAGTACTCGTGTAACTCGTTAGGCTCGGTACAAAA
GATTAGCCACTCCCAATACAAAAAAAGATCAGCCACTCAACACCCTATGTCCCAAGCGCACAACACAAGGCCTAGCCGTT
GAAGGCCCAACCGCCTAGGAGACTCATGCGTTACAAGGAAATTACTATTGTTTAGTGATATATATGGTTAATATATACAT
AATCA-TTTTATAATATA-TGAGGGTTTTATGTTCATATCTTTAACGAGCTTAACAAGCTAAACGAGCCAGCTCGCGAGT
TATACGAGTCGAGCCAATCTTGGATTTGAGCTCATTATAATAACGAGTCGAGTCGAGCTAGCTCGTTAACGAAACGAGCT
CTAGCGAGTCGAGCCGAGCTGGCTCGACTCGGCTCGAATTCCAGCCCTA-------------------------------
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>chr6A_2449
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---------------------------------------------------------TATACGGCTGGAAAAAAAGCTCG
AAGCTCGCGAGCTAAACGAGTAGCTCGTGACTCGGCTCGAATCGACTCAGACTCGAAGAATAACGAGTCAAACCAAGCTT
TAGTTTAAGATCATTTATAGACCAAGTTAAACGAGCCAATCTCAGGAATACTCGTGTAACTCGTTAGGCTCGGTACAAAA
GATCAGCCACTCCCAATACAAAAAAAGATAAGCCACTCAGCACCCTACGTTCCAGGCGCACAACACAAGGCCCAGTTGTT
GAAGGCCCAGCCGCCTAGGAGACTCATGCGTTACAAGGAAATTACAATTGTTTAGTGATATATATGTTTAATATATACAT
AATCA-TTTTT-ATCATTTT--GGGTCTTATGTTCATATCTTTAACGAGCTTAACAAGCTAAACGAGCCAGCTCGCGAGT
TATACGAGTCAAGCCAATCTTGGGTTTAAGCTCGTTATAGTAACGAGTCGAGTCGAGCTAGCTCGTTAACGAAACGAGCT
CTAGCGAGTCGAGCCGAGCTGGCTCAACTCGGCTCGAATTCCAGCCCT--------------------------------
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>chr5A_2451
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-----------------------------------------------------------TAGGGCTGG-AAAAAAGCTCG
AAGCTCGCGAGCTAAATGAGTAGCTTGTGACTCGGCTCGAATCAACTCGAACTCGAAGAATAACGAGTCGAGCCAAGCTT
TAGTTTAAGATCGTTTATAGACCAAGTTAAATGAGCCAATCTCACGAGTACTCGTGTAACTCGTTAGGCTCGTTACAAAA
GATCAGCCACTCTCAATACAAAAAAAGATAAGCCACTCAGCACCCTACGTTCCAGACGCACAACACAAGGCCCAGCCATT
GAAGACCCACCCGCCTAGGAGACTCATGCATTACAAGGAAATTACAATTGTTTAGTGATATATATGTTTAATATATACAT
AATCA-TTTTTTATCATT-TGAGGGTTTTATGTTCATATCTTTAACGAGCTTAACAAGCTAAACGAGCCAGCTCGCGAGT
TATATGAGTCGAGTTAATCTTGGGTTTAAGCTCGTTATAGTAACGAGTCGAGTCGAGCTAGCTCATTAACGAAACGAGCT
CTAGCGAGTCGAGCCGAGCTGGCTCGACTCAGCTCGAATTCCAGCCCTA-------------------------------
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>chr3A_2451
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-----------------------------------------------------------TAGGGCTGG-AAAAAAGCTCG
AAGCTCGCGAGCTAAACGAGTAGCTCGTGACTCGGCTCGAATCTACTCGAACTCGAAGAATAACGAGTCGAGCCAAGCTT
TAGTTTAAGATCGCTTATAGACCAAGTTAAACGAGCCAATCTCACGAGTACTCGTGTAACTCGTTAGGCTTGGTACAAAA
GATCAGCCACTCTCAATACAAAAAAAGATAAGCCACTCAGCACCCTACGTTCCAGATGCACAACACAAGGCCCAACCATT
GAAGACCCACCCGCCTAGGAGACTCATGCATTACAAGGAAATTACAATTGTTTAGTAATATATATGTTTAATATATACAT
AACCA-TTTTTTATCATTTTGAGGGTTTTATGTTCATATCTTTAACGAGCTTAACAAGCTAAACGAGCCAGCTCGCTAGT
TATACGAGTCGAGTCAATCTTGGATTTAAGCTCGTTATAGTAACGAGTCGAGTTGAGCTAGCTCGTTAACGAAACGAGCT
CTAGCGAGTCGAGCCGAGCTGGCTCGACTCGGCTCGAATTCCAGCCCTA-------------------------------
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>chr3A_2451
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-----------------------------------------------------------TAGGGCTGGAAAAAAAGCTCG
AAGCTCGCGAGCTAAATGAGTAGCTCGTGACTCGGCTTGAATCGAATCTAACTCGAAGAATAACGAGTCGAGCCAAGCTT
TAGTTTAAGATCGTTTATAGACCAAGTTAAACGAGCCAATCTCACGAGTACTCGTGTAACTCGTTAGGCTCAATACAAAA
GATCAGCCACTCCCAATACAAAAAA-TATAAGCCACTCAGCACCCTACATCCCGGACGCACAACACAAGGCCCAGCCATT
GAAGACCCACCCGCCTAGGAGACTCATGCATTACAAGGAAATTACAATTGTTTAGTGATATATATGTTTAATATATACAT
AATCA-TCTTTTATCATTTTGAGGGTTTTATGTTCATATCTTTAACGAGCTTAACAAGCTAAATGAGCCAGCTCGCGAGT
TATACGAGTCGAGTCAATCTTGGGTTTAAGCTCGTTATAGTAACGAGTCGAGTCGAGCTAGCTCGCTAAAGAAACGAGCT
CTAGCGAGTCGAGCCGAGCTAGCTCTCCTCGGCTCGAATTCCAGCCCTAGATG---------------------------
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>chr3A_2451
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-----------------------------------------------------------TAGGGCTGGAAAAAAAGCTCG
AAGCTCGCGAGCTAAACGAGTAGCTCGTGACTCGGCTCGAATCGACTCGAACTCGAAGAATAACGAGTCGAGCCAAGCAT
TAGTTTAAGATCATTTATAGACCTAGTTAAACGAGCCAATCTCACGAGTACTCGTCTAACTCGTTAGGCTCGGTACAAAA
GATCAGCCACTCCCAATACAAAAAAAGATAAGCCACTCAGCACCCAACGTTCCAGGCGCACAACACAAGGCCCAACCGTT
GAAGTCCCATCCGCCTAGGAGACTCATGCATTACAAGGAAATTACAATTGTTTAGTGATATATATGTTTAATATATACAT
AATCA-ATTTT-ACCATTTTGAGGGTTTCATGTTCATAACTTTAACGAGCTTAACAAGCTAAACGAGCCAGCTCACGAGT
TATACGAGTCGAGCCAATCTTGGGTTTAAGCTCGTTATAGTAACGAGTCGAGTCAAGCTATCTCGGTAACGAAATGAGCT
CTAGCGAGTCGAGCCGAGCTGGCTCGACTCGGCTCGAATTCCAGCCCTAC------------------------------
--------------------------------------------------------------------------------
---
>chr6A_2451
--------------------------------------------------------------------------------
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-----------------------------------------------------------TAGGGCTGGAAAAAAAGCTCG
AAGCTCGCGAGCTAAACGAGTAGCTCGTGACTCGGCTCGAATCGACTCGAACTCGAAGAATAATGAGTCGAGCCAAGCTT
TAGTTTAAGATCGTTTATAGACCAAGTTAAACCAGCCAATCTCACGAGTACTCGTGTAACTCGTTAGGCTCGGTACAAAA
GATCAGCCACTCCCAATACAAAAAAAGATAAGCCACTCAGCACCCTACGTTCCAGGCGCACAACACAAGGCCCAACCGTT
GAAGGCCCATCCGCCTAGAAGACTCATGCGTTACAAGGAAATTACAATTGTTTAGTGATATATATGTTTAATATATACAT
AATCA-ATTTT-ACCATTTTGAGGGTTTTATGTTCATATCTTTAACGAGCTTAACAAGCTAAACGAGCCAGCTCGCGAGT
TATACGAGTCGAGCCAATCTTGGGTTTAAGCTCGTTATAGTAACGAGTCAAGTCGAGCTAGCTCGGTAACTAAACGAGCT
CTAGCGAGTCAAGCCGAGCTGGCTCGACTCGGCTCGAATTCCAGCCCTA-------------------------------
--------------------------------------------------------------------------------
---
>chr6B_2451
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-----------------------------------------------------------TAGGGCTGGAAAAAAAGCTCG
AAGCTCGCGAGCTAAACGAGTAGCTCGTGACTCGGCTCGAATCGACTCGAACTCGAAGAATAACGAGTCGAGCCGAGCTT
TAGTTTAAGATCGTTTATAGACCAAGTTAAACGAGCCAATCTCACAAGTACTCGTGTAACTCGTTAGGCTCGGTACAAAA
GATCAGCCACTCCCAATACAAAAAAAGTTCAGCCACTCAGCACCCTATGTCCCAGGCGCACAACACAAGGCCTAGCCGTT
GAAGGCCCAACCGCCTAGGAGACTCATGCATTACAAGGAAATTACTATTCTTTAGTGATATATATGTTTAATATATACAT
AATCA-TTTTATAATATA-TGAGGGTTTTATGTTCATATCTTTAACGAGCTTAACAAGCTAAACGAGCCAGCTCGCGAGT
TATACGAGTCGAGCCAATCTTGGA-TTGAGCTCGTTATAATAACGAGTCGAGTCGAGCTAGCTCGTTAACGAAACGAGCT
CTAGCGAGTCGAGCCGAGCTGGCTCGACTCGGCTCGAATTCCAGCCCTAC------------------------------
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---
>chr7B_2451
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-----------------------------------------------------------TAGGGCTGGAAAAATAGCTCG
AAGCTCGCGAGCTAAACGAGTAGCTCGTGACTCGGCTCGAATCGACTCGAACTCGAAGAATAACGAGTCGAGCCGAGCTT
TAGTTTAAGATCGTTTATAGACTAAGTTAAACGAGCCAATCTCACGAGTACTCATGTAACTCGTTAGGCTCGGTACAAAA
GATCAGCCACTCCCAATACAAAAAA-GATCAGTCACTCAGCACCCTATGTCCCAGGCGCACAACACAAGGCCTAGCCGTT
GAAGGCCCAACCGCCTAGGAGACTCATGCATTACAAGGAAATTATTATTGTTTAGTGATATATATGTTTAATATATACAT
AATCATTTTTATAATATA-TGAGGGTTTTATGTTCATATCTTTAATGAGCTTAACAAGCTAAACGAGCCAACTCGCGAGT
TATACGAGTCGAGTCAATCTTGGATTTGAGCTCGTTATAATAACGAGTCGAATCGAGCTAGCTCGTTAACGAAACGAGCT
CTAGCGAGTCGAGCCGAGCTGGCTCGACTCGGCTCGAATTCCAGCCCTAC------------------------------
--------------------------------------------------------------------------------
---
>SNPs
--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS--------------------------S---------------SSSSSS-----S--------------------
---------------S-------S----------------SS---SS-SSSSSS--------------S--------SS-
-----S-------------------------------------------------------S-----------SSSSS--
---------------------------S---SSSSS-----------------------SSSSSS---------------
--------------------------------------------------------------------------------
----------------S-----S---------------------------------------------------------
-----------------------------S--------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S--------S-
----------------------------------S---------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
------------S-------------------------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
-----------------------------------------------------------------------SSSS-----
----S---------SS--------------------------------------------------------S-------
-----S----------S---------------------------------------------------SSSS--------
------------------SS------S----------------------------------SSSSS------------S-
-----------------SS-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
-------------------S------------------------------------------------S-----------
-----------------------------------------------------SSS-------------------S----
-------------S-SS--------------------S------------------------------------------
---
>forward_63
-------------------------------------------GGACAATGAAGGGGCGAGAA-----------------
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---
>reverse_1685
--------------------------------------------------------------------------------
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----ATGGTTCGAGAGCCTCCTCT--------------------------------------------------------
--------------------------------------------------------------------------------
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---
>forward_117
--------------------------------------------------------------------------------
-----------------TGTTTCGCGCCAAAACAGTT-------------------------------------------
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---
>reverse_2235
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------AGGGTA
ATCTCTCGGACTACA-----------------------------------------------------------------
--------------------------------------------------------------------------------
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---
