>input_sequence_60374
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----------------------------ATGTCAGAGCTTCGCGATCTTCCCGCAGTCCTTGCAGCGGGGTCTGACGAAA
GGTCATATGTGATCGAGGTAGACGGCTATTCAAGAATCAAGGGG---ATGATCGGGCATGGCGACAAAGTGAAATCTGCC
CCTTTCAGTGTTGGAGGCTACGTCTACGACTGGGTTTTGTGGTTCTACCCAAACGGCAGCGACATCACACATTATGAAGC
CGGTTACGTATCTGTTTTTCTGGCTCTTGATTCTGGTTTTGCCACGGACGTGAGGGCGAAATTTAGAATTACTTTGCTT-
-----GACAAGAATGGGGAACCAGACATTACAAGAAGCAAGACCAATCCCGAACGCATCTTCTCTAGCAAAGGTTCATGC
AAGGGTTTCAGTGATTTTGTCGGCAGAGCTTATCTTGAGAA-TCCAAGGACTCTAAGCAACGATAGTGTCAGCATCATGT
GCCATGTTACTGTCGTGAAGAATATCCACAAAGGTGATCGGCTTATCGTGGTTACTTCAAGAAACTTGCATCAACATCTT
GGAGACCTACTAAAGAGCATGGATGGAGCCGACGTGACCTTTCATGTCGGCGGGGAGAGTTTCTCGGCTCATAGGGTCGT
GCTCG----CCGCTCGGTCATCCGTATTCAGAGCGGAGCTCTTTGGCGGCATGAAGGAGAAAGCCGGTGGTCCGATTGAA
ATTAGTGACATGGAAAGTGATGTGTTCAAGGCCTTGCTCCACTTTATATACACAGACGAG-TATGAGCCTGTTCCTGAGA
TGACCGATGGATGTGAAGCACGGAGAAAAGCGGTGATGGCTGGCCATCTACTTGTTGCAGCAGAAAGATACAATATCGAG
AGGCTGAAGCTGATATGCGAAGAGAGGATGTGCAACCTCATCAACCCTGACATCGTGGCGACTAGTTTGGCTCTAGCTGA
GCAGCACGGCTTCCATACATTCAAGGATGCCTGCTTTGAGTTCCTCGCTTCGCCTTCCAATCCAGAGGCGATGATGGCAA
GTGATGGTTACGAGCATCTGAAGAATAGCTGCCCATCAGTTCTCAAGGAGCTGGCTGCTAGCTTCCTGCCTGCCGAACTG
AAAGCGGCCAAAGATATTATCATGACAATTTAG-----------------------------------------------
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>chr1D_1_TraesCS1D01G073200
GTTTTTTTTTTCTTTTTGTAAAATATTTTAAATATGAACGAACTCACTGGAGTTTGGTTTAATTTGCGCCGTGTTTGTGA
CAAAATTTAAGTTTTAAAAAAAAAGTGGGCGCCGCAACTGGAGGGCATCACGCCCCCAGCACACGGTTTAGCGCCGGTGC
GCCCCCAGGGGCGATTTTTAGCTCCTCCTGGGGGGCAACGGCGGGAGATGCTCTAACACCCACACGTCGCTGGGTGCTTA
GGTGACTCTTCACCCAGATGTCAACTGCTTCAAAATTCGTGCAAATGGATAAAACAGCATCGAGTGCGTGTGGGCGTGTT
GATAAGTGCCACATGCGTGAGCGTTATCACTTGGGTATAT----------------------------------------
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------------------------------------------------------------------------------TT
TAGCTCATGAACATTTTGAATTTTTACCAACATTTTCTAAGATCCATGTACTATATTTTTAATGTAGTGAATGTTTTTTC
ATGAAACGTGAAAAAATTGCAACATCAATTCCCCTGTTCTTCTTAGTACAAATTT-GTTAATCAATTACGTAGAAAACAA
ACCTTCAAAGAAAAAAACTTGGTAGTACGCACTCAGGAGTCCAGGCTCAGCCTGTTGCACTTGCACGCTCCGAGCGCCC-
-----CTGTGTGCTTATACGGCCGGGTCATCCGCCCGCCCCACGCCAACGGCCGCCGGTGACACTGTG--CCGCTCCACT
GAGCTCTCCGCGCTAGCTGGTTACAGGATCGGGAACGACAGCAGTCTTCGGAGTAGACGCCATGAAGGCGTCGTGCATTG
GCTGGACTCGACCGCGCCCAGGAGATCAGCGTTGATACGCATCTGAAGATAGCTATCCCAATCTTCCTTGGTTAGGATTC
TTATTTGGCATGTTATCTGTTCGGTTTAAATGGCAGAAAACTATGCCGACCCCAAGATCTATTAGAGATCTTATTTGGCA
TGTATATATATCTGCCTTGTAT------------------------------------------AG--------------
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---------------------------------------------ACGCAGGGAATCTCTCATTGTCGCCGTTCTTCCAT
CGGAGAGCAAATCTAAGAGACGGCAAGAATGTCAGAGCTTCGCGATCTTCCCGCAGTCCTTGCAGCGGGGTCTGACGAAA
GGTCATATGTGATCGAGGTAGACGGCTATTCAAGAATCAAGGGG---ATGATCGGGCATGGCGACAAAGTGAAATCTGCC
CCTTTCAGTGTTGGAGGCTACGTCTACGACTGGGTTTTGTGGTTCTACCCAAACGGCAGCGACATCACACATTATGAAGC
CGGTTACGTATCTGTTTTTCTGGCTCTTGATTCTGGTTTTGCCACGGACGTGAGGGCGAAATTTAGAATTACTTTGCTT-
-----GACAAGAATGGGGAACCAGACATTACAAGAAGCAAGACCAATCCCGAACGCATCTTCTCTAGCAAAGGTTCATGC
AAGGGTTTCAGTGATTTTGTCGGCAGAGCTTATCTTGAGAA-TCCAAGGACTCTAAGCAACGATAGTGTCAGCATCATGT
GCCATGTTACTGTCGTGAAGAATATCCACAAAGGTGATCGGCTTATCGTGGTTACTTCAAGAAACTTGCATCAACATCTT
GGAGACCTACTAAAGAGCATGGATGGAGCCGACGTGACCTTTCATGTCGGCGGGGAGAGTTTCTCGGCTCATAGGGTCGT
GCTCG----CCGCTCGGTCATCCGTATTCAGAGCGGAGCTCTTTGGCGGCATGAAGGAGAAAGCCGGTGGTCCGATTGAA
ATTAGTGACATGGAAAGTGATGTGTTCAAGGCCTTGCTCCACTTTATATACACAGACGAG-TATGAGCCTGTTCCTGAGA
TGACCGATGGATGTGAAGCACGGAGAAAAGCGGTGATGGCTGGCCATCTACTTGTTGCAGCAGAAAGATACAATATCGAG
AGGCTGAAGCTGATATGCGAAGAGAGGATGTGCAACCTCATCAACCCTGACATCGTGGCGACTAGTTTGGCTCTAGCTGA
GCAGCACGGCTTCCATACATTCAAGGATGCCTGCTTTGAGTTCCTCGCTTCGCCTTCCAATCCAGAGGCGATGATGGCAA
GTGATGGTTACGAGCATCTGAAGAATAGCTGCCCATCAGTTCTCAAGGAGCTGGCTGCTAGCTTCCTGCCTGCCGAACTG
AAAGCGGCCAAAGATATTATCATGACAATTTAGTGTTGTGGCTAATCATCGTTGCATCTAATCTAATTTAGTATCTATGG
TCTTACCTATTTCTCTATATTGATTGCATGTATACTTCTTGCACTCGTCGCTGCACCTATTTCTCA--------------
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----------------------------------------------------------------------AGGAACATGC
ATACTTCTTGCACCTGCAGCCTGAATTTCAATTTGCCGTGATCACTCTTCGCTGACTTTACAGCTTCCAAACTCATGTAA
TCGTCGGTAACGAAACTCATGTA--------------------------ATCTCATGTCCGTTTCGTCTTCTGCAGTATC
CTGCTATATATACACCCAACTGTACTTTCCAGACATTAGCAGTTCTCCCTTATTAATAGTAAAGCACTGATAATACTGTC
ATTTACGGCCTGAGACTAGTGACTGGCATCGCAATGATAAATGAAACATTTTTCTTGTGAGCTTGAATTTGAGCCAGATA
ATTATTTAATGTTTGTTAAAAGGAATTAAGCTATGAGTTCCGCTTCGGTAAACCCCCCCTACAAACCGTATAAAGGGTAA
TATGGACTTTTCACACTTTGGTATGTATAATGAGTTGTCCATAGGTATGTATATACGTATATATGCCAGTACGTTTACTT
AAAGTTTCACATTTAATGGACTTTTCACACTTTGGTATGTATAATGAGTTGTCCGTAGGTATGTATATACGTATAGGCCA
GTACGTTTACTTAAAGTTTCACATTTTTTTAAACGTAAAAATAATGCACACATGAAGGTTCAAACTAGAGACCTCCCGTT
AGACCATACAACAAGGTAACCAACAGACCACGTTAGTAGTTGTGACAATTATAGGTATGCCAGCTATCTTAGTTCTAATA
CGCAGTGGGTTTCCATTTTTTTTGGCCGAGTTTTCATCTGCTTTTTTTTTCTAATTTTTCCATTTTCTTTTCTTTTTAAA
AATCGTGAACTTTTATTAAATTTATGAATTTTTTTCCAAATCTGTGAACTTTATTTGAATCCTTATTTAAAAAAAAATCA
GTGAACCCTTCTTCAAAACATGT
>chr1A_197
AAA-----------------------------------------------------------------------------
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---------------------------------------GGCTGGAGATGCTCTAACACCCACACAACGCTGGGTGCTTA
GGTGACTCTTCACCCAAATGGCAACTGCTTCAAAATTCATGCAAACGGATAAAACAATATCGAATGCGTGTGGACGTGTT
GATAAGTGCTACATGTGTGAGCGTTATCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTAGGGGCCCTCATTTTGGGCCGAACTTTTAT
TGGATCCTGAAGCTTCTTCAGTCGGGCCCTATTGGCCTGTTCTCTGCTGGCGCTCCGAATTTTGGGCCTCGAACTCTAAT
CGATCGATGGACTTCTTTTTTGATCGATTGAAGGACCTCTTTCCAGCCAATCGTTTACGATTCTGTTAGCTGCTGCAGTC
GTTCCTCTTTCCAGCCAATCGTTTACGATTCTGTTGCTTGGCGGCTCGACGAATCACTTCAGGCAGCCGCACGGATCCAC
GGCAGCCGGCAAACCCCATATCATTTGCCACGCAGCGGCTTTGCCCTAGGTAGCCAACGCCACAAGGTTGAAGGCTTGAA
GCAGTAGGTGGCCGAGCAGGCGAGCACCAAGGCATCGATCAATTTACCACTTCATCAGGTACGCTTAAGCCAAAAGCATA
GATTGAATAATTTTCTAGTGCTTCATGACCCCAATCAGGGCATCACAGATCAGCTTAATTTAGGTTGTTTTTTCTACTGA
ATAATTATATCAATGTGTCTATATATTTATCTTGGTAAACACTGTATATTAAATAATTACATTTTCTTATTTCTTAATCT
CGGCAAACACTATATTGAATAATTTTATATTAATATTGTTAGTTTCATATTTTTGCACATATGCATCAGTCTAGTACTAT
ATTCACTACTTTTGTCGCGTTGATATTTCATATATTTTGCACTACTGTACGAGATAACTCATATTCAAATTTATATGATT
AACTGAATATATACTTTAAAATTTAGGGCCCCATTTTATATATCGCACCGGGCCCCCGAATTTCTGGAGACGGCCCTGTT
TAGCTCATGAACATTTTGAATTTTTACCAACATTTTCTCAGATCCATGTATTATATTTTTAATGTAGTGAATGTTTTTTC
ATGAAACGTGAAAAAATTGGAACATCAATTCCCCTGTTCTTCTTAGTACAAATTTTGTTAATCAATTGCGTAGAAAACAA
ACCTTCAAAGAGAAAAACTTGGTAGTACGCACTCAGGAGTCCAGGCTCAGCCTGTTGCACTTGCACGCTCCGAGCGCCCT
TGCCCCTGTGTGCTTAT------------------------------ACGGCCGCCGGTGACACTGTGTGCCGCTCCACT
GAGCTCTCCGCGCTAGCTGGTTACAGGATCGGGAACGACAGCAGTCTTCGGAGTAGACGCCATGAAGGCGTCGTGCATTG
GCCGGACTCGACCGCGCCCAGGAGATCAGCGTTGATACGCATCTGAAGATAGCTATCCCAATCTTCCTTCGTTAGGATTC
TTATTTGACATGTTATCTGTTCGGTTTAAATAGCAGAAAACTATGCCGACCCCAAGATCTATTAGAGATCTTATTTGGCA
TGTATATATATCTGCCTTGTAT------------------------------------------AG--------------
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---------------------------------------------ACGCAGGGAATCTCTCATTGTCGCCGTTCTTCCAT
CGGAGTGCAAATCTAAGAGACGACAAGAATGTCAGAGCTTCGTGATCTTCCCGCTGACCTTGCAGCGGGGTCTGACAAAA
GGTCATATGTGATCAAGGTAGACGGCTATTCAAGAGTCAAGGGG---ATGATCGGGCATGGCGACAAAGTGAAATCTGCC
CCTTTCAGTGTTGGAGGC------TACGACTGGGTTTTGTGGTTCTACCCAAACGGCAGCGACATCACACATTATGAAGC
CGGTTATGTATCTGTTTTTCTGGCTCTTGATTCTGGTTTTGCCACGGACGTGAGGGCGAAATTTAGAATTAGTTTGCTT-
-----GACAAGAATGGAGAACCAGACATTACAAGAAGCAAGACCAATCCCGAATGCATCTTCTCTAGCAAAGGTTCATTC
AAGGGTTTCCGTGATTTTATCGGCAGAGCTTATCTTGAGAA-TCCAAGGAATCTAAGCAACGACAGTGTCAGCATCATGT
GCCATGTTACTGTCGTGAAGAATATCCACAAAGGTAATCGGTCTGGCTTGATTCCTCCAAGAAACTTGCAGCAACATCTT
GGAGACCTACTGAAGAGCATGGATGGAGCCGACGTGACCTTTCATGTCGGCGGGGAGAGTTTCTTGGCTCATAGGGCCGT
GCTCG----CCGCTCGGTCATCCGTATTCAGAGCGGAGCTCTTTGGCGGCATGAAGGAGAAAGCTGGCGGTCCGATTGAA
ATTAGTGACATGGAAAGTGACGTGTTCAAAGCCTTGCTCCACTTCATATACACAGACGAG-TATGAGCCTGTTCCTGAGA
TGACCGATGGATGTGAAGCACGGAGAGAAGCGGTGATGGCTGGCCATCTACTTGTTGCAGCAGACAGGTACAATATCGAG
GGGCTGAAGCTGATATGCGAAGAGAGGGTGTGCAACCTCATCAACCCTGACATCGTGGCGACTAGTTTGGCTCTAGCTGA
GCAGCACGGCTTCCATGGAATCAAGGATGCCTGCTTTGAGTTCCTCGCTTCGCCTTCCAATTTGGAGGCGATGAT-----
-----------GAGCATCTCAAGAATAGCTGCCCATCAGTTCTCAAGGAGCTGGCTGCTAGCTTCCTGCCCGCCGAACTG
AAAGCGGCCAAAGATATTATCATGACAATTTAGTATTGTGGCTAGTCATCGTTGCATCTAATCTAATTTAGTATCTATGG
TCTTACCTATTTCTCTATGTTGATTGCATGTACTATCTAGATCCAATTTAGCAATCAGAATGCGAATTGATTGGTGATTC
CTGTGTCTTGTATTTGCTGGCATGCATGACTAGTGTCGAACTGAATTTCTTGTGCTTGCTGCAGTTTTCTTTATGGTTTG
TA------------------------------------------------------------------------------
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-------------------------------------------------------------------------------A
GGACTTCTAAGTTTCTGCAGTTTCTGTTTTTCCCATGCATGGTTAATGTGGAATTGGCAAGGCTTTTTTATAGACTGAAA
TTTTCATCGTCTACCTTGCTTATAACAAAGATATCTTCTTAGTGATTCCAAGAATAT--TTTTTTTGCCATTATTACTTT
GCAATACGCGAAAAAACCTTGAATATT-ATTTCCCAATCAATCCCGAGGCTTCAGTTTGTTTGTCAATACAGGAACATGC
ATACTTCTTGCACCTGCAGCCTGAATTTCTA-TTTCCGTGATCACTCGTCGCTGACTTTACGGCGTCCAAACTCATGTAA
TCGTCGGTAACGAAA-----------------------------------------------------------------
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>chr1B_730
ACGCCCATGA----------------------------------------------------------------------
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----------------------------------------------------------------AAGCCGTCGTGCATGG
GCCGGACTCGAACCCGTCCCGGAGATCAGCGTTGATACGCATCCGAAGATAGCTATCCCAATCTTCCTTGGTTAGGATTC
TTATTTGGCATATAATCTGTTCGGTTTGAATGGTAGAAAACAATGCCGACCCAAAGATC---TAGAGTTCTTATTTGGCA
TGTGTATATATCTGCCTTTTATTTGCTTCGAGACAGACCGATCGAACTTCCCACGGTAGTATATAG--------------
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---------------------------------------------ACGCAGGGAATCTCTCATTGTCGCCGTTCTTCCAT
CGGAGTGC-AATCCAAGAGACGACAAGAATGTCAGAGCTTCCCGATCTTCCCGCTGACCTTGCAGCGGGGTCTGATAAAA
GGTCATATGTGATCAAGGTAGACGACTACTCAAGAATCAAGTTG---ATGATCGGGCCTGGCAACTGCGTGAAATCTGCC
CCTTTCAGTGTTGGAGGC------TACGACTGGGTTTTGCGGTTCTACCCAAACGGCTGCGACATCACACAGTATGAAGC
CGGTTGCGTATCTGTTCTTCTGGCTCTTGATTCTGGTTTTGCCACGGACGTGAGGGCGAAATTTAAAATTACTTTGCTT-
-----GACAAGGATGGGGTACCAGCGCATACAAGAAGCAAGATCACTCGCGAACGCATCTTCTCTAGCAAAGGCTCATGC
AAGGGTTTCAGTGATTTTGTCGGCAGAGCTTATCTTGAGAA-TCCAAGTAGACTAAGCAACGACAGTGTCAGCATCATGT
GCCATGTTACTGTCGTGAAGAATATCCACAGAGGTGATCGGCTTATCTTGGTTCCTTCAAGAAACTTGCATCAACATCTT
GGAGACCTACTGAAGAGCATGGATGGAGCCGACGTGACCTTTCATGTCGGCGGGGAGAGTTTCTCGGCTCATAGGGTCGT
GCTCGATCGCCGCTCGGTCATCCGTATTCAGAGCGGAGCTCTTTGGCGGCACGAAGGAGAAAGCCGGCGGTCCGATAGAA
ATTAGTGACATGGAAAGTGACGTGTTCAAGGCCTTGCTCCACTTCATATACACAGACGAG-TATGAGCCTGTTGCTGAGA
TGACCGATGGATGTGAAGCACGGAGAGAAGCGGTGATGGCTGGCCATCTACTTGTTGCAGCAGACAGGTACAATATCGAG
GGGCTGAAGGTGATATGCGAAGAGAGGATGTGCAACCTCATCAACCCTGACATTGTGGCGACTAGTTTGGCTCTAGCAGA
GCAGCACGGCTTCCGTAGCATCAAGGATGCCTGCTTTGATTTCCTCGCTTCTCCTTCCAATTTGGAGGCGATGATGGCAA
GTGATGGTTACGAGCATCTCAAGAATAGCTGCCCATCAGTTCTCAAGGAGCTGGCTGCTAGCTTCCTGCCTGCCGAACTG
AAAGCGGCCAAAGATATTATCATGACAATTTAGTATTGTGGCTAATCATCGTTGCATCTAATCTAATTTAGTATCTATCG
TCTTACCTATTTCTCTATGTTGATTGCATGTACTATGTAGATCCAATTTTGCAATGAGAATGCGAATTGGTTGGTGATTC
CTGTGTCTTTTATCTGCTGGCATGCATGACTGGTGTCGAACTGAA---------CTTGCTGCAGTTTTCCTTATGGTTTG
TATCTTTCGAAGGGCCTTTCCTTAGGCGCATGCTAGAAATCATCCGGCTGATCTGCGCGTGGGATCAGCCGGGTCGGCAG
CCACTCGATCGTCCTGGCAGCCCGTATTATAAGCCGTTCGATCCACGTCTCAAGCCTGTTCGATTCATTTCTTTTCGAGA
GTGCGGGTCGCGAGTACTGCTTTCACAAACAGCCACGCACACATGCATGACAGGCGAAGTGCTTCTTGTTCAGCTAAGCA
GCAAAGTCATCTAGTATTTGTTACGTAGCAAGTCACCCATTTTTTAATAGAAAAATAGCAAGTCATCCATGCTCGTGCAC
CACCACGAGCTAATTCAAATACAATCGGCAGAGTTTTTTTTTTAGAGTACGCCAAAGGCTTGAAAGCCTACAAGAAAATG
TTGTAGGTGGATTTATATAGAAGGGGAGAAAATGTTGTACAAGACTTCGCGATGAGACTAGAAAGCCTACACGGAAACTC
CGACTCAAAAAAAAAAGTCTACTCTCTCACGAAAGGATCTAAACCCTCAACTCCTAGACCCGCTTTCTTCCAAAGCTTGA
TCTCCTCATGGATGAGCTGAACAAGGTTAGTGTCCGAGCGCACTTGGTCATTGCAGTTGAACACCCGAGCGTTCCTCTGC
TTCCATAGGTGCCACGCGGTCAAGATGACGAGCGAATCAAACCCTCTCTTGAGCTTTCCATGGAAGGACTTCCGCGCTTG
TCCCACCACACCATGAATGTATCCTCGAGGCTTGGGATTTGGATGTTGATTTGAAGCAACTGGAAGCAACCACTCCAAAC
TTGCCTCGCGTAAACGCATCTAGCGAGGATATGGTCTGTTGTGTCCTCCTCTCAGCAAGTGTAGCATGCCGAAGTCGTAT
CTTGGAGACCATGCCTCGCACGTCGGTCCGAATTCCATAGCCGGTATCGAGAGGCAAGCCACGCAAAAATTTTGCACTTG
AGAGGCGCCCAACTGCTCCAAATGCATTGAGCGGTGGCGAACCGAGTCATGCCCTGGCATAGCATACTGTAGGTGGATTT
TGCGCTATATGAACCCGTGACACTCCAGGGCCAGTAGAAGACATCATCCTCCGATACATTCCTTTGGATCGTCGCCAAGG
CATGTTGCAAGTGTATGAGTTGCAGGTGAGCCGTGAAGGATAGCTCACCCGTGATGTCATTGACCCAAGAGCCCTCGAAA
CAATCGGCAGAGTGGCTGCTGCATATGCTGCATACGAGGGTAGACGCGCTGGAAGACGAGACGACAGTGTCGCAAAGGGT
TGTTCGACTGTTGCGGGCCTAGAGTAAGGGCGCTAGCAGTGCTGCGACGCTGGACGACCATCTCTGCAATGGCAGCCTGG
GGTGATGCTACGAGGAGGGCTTCGACGAAAACCTAGCACATGCTTCGATAGCCGTGGTGATGGCGCGATGACGTGCTTCG
GCGGTCGCGGCGATTCTGCGACGGTAGCCTGTCTGCTTCGACGATGTTGCGACAACATGCTTTGACACTTGCAGCGATAC
TATGACGACAAATTGTCTGCTTCAATGATGTTGTGACGGCATGCTTCGGCCACACAATGGTGGGTGCTTCAACAACCGCG
GTGATGCTACGACGGCAACCCGGGATACTTCGGTGATGTTGCATCGGCGTGCTTTGACGGCCGCGATGGGTGCTTCGACA
GTCACAACGATGCTACGATGGCGAGCCAGCTGCTTCCATGATGTTACGACAACATGCTTCCAACACCCACGACTATGTCG
TGACGAACCGTGACGGCGACGTTCTTTCAATGACCATGGCGATGCTGCGACGAAGCCCTGATTGCTTCGACGGCATGCTT
CCCGGCCGTTGCAGTGCTGCCACAATGGCACGATTGTTTCAATGATGCTACGACAACAACTCGGCTAATCCGATGATGTT
GCGGTAGTATATATGTTTCGACAGCCACGACGCTTGCAGAGGTGTCAAGGACCCTACTCTAAGCATTGCTATATCTAAGC
AAATCATGACTCCATTGTGCTTGCGAGTACCATAATCCAACAAAGACCCACAATCAACGTAAATAATATGATGTTCTAAA
ATCCTGGTTTAGTTCTTGCTGTGTGCTTTCTCTTGGGATGTCACGGTTACTGTAGCTTACGTGACATCCCTTTTGGATGT
TAGAGGATCCGCTTCCCACGTACATATGTAGGGACGTGCTAAGCACAAGGTGAGAAGTGCAAGTAAAAAGAATCTGTTAA
TTAACAATCATAGCTTCAGGGGTCACTATGGACGTCACATGAAGAACACAGGCGCCGCACCACACGATGGCGTGCGATCG
CACGGTGCCGGACGCGGCTGACCAAGCCACAAAATCATCCGGCTGTTTTTGAACATTTTCCCTTTCCTTATGGTTTGTAA
GGACTTCCAATTTTCTTCAGTTTCTCTTTTTCCCATT----GTTAATGTGGAATTGGCAAGTCTTTTTTATAGACTGAAA
TAT---TCATCTACCTTGCT--TAATAAAGATATTTTCTCAGTGATTCCAAGGATATTGTTTTTTTGACATTATTACTTT
GCA-TACGCGAGAAAACCTTGAATATTTATTTCCCAATCAATCCCGAGGCTTTAGTATGTTTGTCAATACAGGAACATGC
ATACTTCTTTCACCTGCAGCCTGAATTTCTATTTGCCGTGATCACTCGTCGCTGACTTTACAGCGTCCAAACTCATGTAA
TCGTCGGTAACCAAAAGCATGCAAGAGTCACAACAGATAACCGTAGCTGATCTCATGTTCGTTGTGTCTTCTGCACT---
------------CACCCAACTGTACTTTCCAGACATTAGCACTTCTCCCTTAATAATAGTA-------------------
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>chr1A_933
AGAATGGCAGAGATTTGCGATCTCCGTGCTGCCAATATAGCGTCATCCGAGGAAAGTTTGTACGTGATCAAGATAGACGA
ATACTCCAGGATCAAGCGGCAAACCGAGCGTGGAAAATACGTGAAATCGACCCCTTTCAGTGTTGGAGGTCACGACTGGG
TTGTGTGGTATTTCCCGAACGGTTGCCACACCGAAAAGTACGAAGCCGGTTTCATATCTGTTTTTCTAGCTCTTGATTCC
GCTGCGTCGAAGAATGTGAGGGCCAATGTTGGATTTAGTCTGTTTCCTGTTGGCAAGGAGGGGGAACCAGTGGGGTCATA
TAACAAGACCACCGAACATATCTTCCCTAGCAAAGGTTCAGACTGGGGTTTCCCTAACTTTATCAAGAAGGCAGATCTTG
AGGGATCAGTGTATCTAAGGAAAGACAGACTCAGAATCATGTGCGATGTTACTGTCGTGAAGTATGGCCACAATGCTAAT
CGGCTTAGCTTGGTTCCTCCAAGCAACTTGCATCAGCATCTCGGCGACCTCCTAAAGAGCATGGATGGAGCGGACGTCAC
CTTTCATGTTGGCGGGGAGAGTTTCTTGTCTCATAGGTCCATTCTCGCCGCTCGGTCGTCTGTCTTCAGAGCGGAGCTCT
TCGGTGCTATGAAGGAGGACGCCGGTCGCCCAATTGAAATCAGTGATATGGAACCTGATGTATTCAGATCGTTGCTTCAC
TTCATATACACCGACTCACCACCCATTCGTATGATGACCAATGGAGGTCAAGCACGTAGAGATGTGGCGATGGCTGGCCA
TCTTCTTGTTGCAGCTGACAGGTATAACATTGAGAGGCTGAAGCTGATTTGTGAAGAGAAGTTATGCAAGCTCATCGACT
CCGACATCGTGGCGACCAGTCTGGCTCTAGCTGAGCAGCACAACTCCCGCAGACTCAAGGAAGCTTGCTTTCAGTTCCTC
ATTTCTCTTTCCAATTTGGAGGCGATGATGGCAAGTGATGGTTACGAGCATCTGAAGAATAGTTGCCCATCAGTTCTCAA
GGAGCTGGCTGTTAGCTTCCTGCCTGCTGAGCTGAAAGTGGTCAAAGATATTATCATGACAACTTAGTAGCATGGCAATG
ATCATAGCATCTTATCTATTTTAGTATCCATATCTTCTACCATAGTACCTGCAAAAGAGCTTATCTCTATAAATATCTGC
ATATCCACTTTGCAATCAGAATGCGAATTGATTGCGCGATTCCTGTGTTCTTTTATTTGCTGGGATGCAATATTAACGTC
GAACTGGATTTGATGTCCTTGCTGCATGCATTTTTTGTTACGGCTTTTAATGATTTCCAAGGTTCTGCCGTTAGCTCACT
CCATAGAAACACAAATGTGCTAGATATTTTTATGATGGAAGGGATTTCTCCATGATTTTTTTGATAGAAGGGATTCTATG
TAAAATCTGGGTTCCGGCGTTAGCTCATCTTATATATGCAGTTTTTGTTACTGTTTTTAATGATTTCCAAGGTTCTGCAG
TTTGTGCTCCATCCATAGTCCTGTTTTCCCCTTTTTTAGTGTGGCACTGCCAAGTTTTTGATGGACTGAAAAATTCACCT
ACCTTGCTTAATGAATATATTGGCTCAGTGATTCCAAGCATAAAGTTCTTGACATGATTAATTTGCGTATGGAGAACTGC
TCAATCTCGAGGCTTCAGTAGGCTTATCACTCTGGGAACATGCGTATACAGGTGTACTTGGGCCCACTTTTCTTCATAAT
CAAGTCGTCGGTAATAAGCACCTTGGCGGCGTGTGAGGCCGTGATCTTCAGTAGCTGGTTCTGTAATAAGTAGACAGCTC
TTTTGTAGTTGCTCTAGTCTTTTCTTATGCTGTTAAGTGTGGTTGGTTCCGTCAGTTGATATAGGATGGTTAATGTGTCG
ACCTCAGTCTATGGATTTGTTACCTGGGGTAAAGGGTCGTTGGTGATGTGCTGCGGCTGTAACCTGGGGGTAAAGGTCTT
CCCCTTCACTCAAACTGATCCTAGGTTCGTTTATCAGTTCCATATGAATGAAATTACAGGCAAATATGCTCCTTTCCTTA
CAAAAATAGTGTCGGTAATTAAACACATCCAGGTGGAGGCTGGACAACAGATGGCAGCATATGTAAGTCGGGCGGCGCGA
AGTCGAGCTGAATGCGAGAGAAGCACGGCGACAGCAGCGTGACAGCAATGCCGGGTTAGGCCAAGGTCACCATGGACGAG
AGCGGGATCGAGAGGGGTGTCGGGCTAAAGTGACAAGTGAGTCCAGCAGGGCGAGTCGCGCAAGGGCATCTGCCCAGTAA
ATTTTGACCCGTAGCTAATCGCGAGCCATTTTCACCAATCAGTGGCATTCGGCCTGTGATTTCTTCAAATTCCTCGTGTG
GGTAAATCTGGGTTCTGGCATTAAAAATACAGACGTTCGGTGCGGCTCCACGCCCATGAAGGCGTCGTGCAGTGCATGGG
CCGGACTCGACCGTGTCCAAGAGGTCAGCGTTGATACGCATCCGAAGCTAGTTATCCCAGTGTTCCTAGATTAGGATTCT
TATTTGGCATGTAATCTGCTCAGTTTAAATGGCAGCAAAGACCTAGAGTTCTTATTTGGCATGTATCTGCGTTTGATTTG
CTTCGAGACAGATCGATCGAACTTCCCACGGTACGTACTATATAGACGCAGGGAATTTCACGTTGTTGCCGTTATTCCAT
CCGGGTGC-AATCTAAGGGACGACAAGAATGTCAGAGCGTCACGATCTTGCTGCTGCCATTGTAGGGGGATCGGAGCAAA
GGTCATGTGTGATCAAGATAGACAGCTACTCAAGAATCATGGGG---ATGGA---GCGTGGCAAGTGCGTGCAATCTGTC
CCATTCAGCGTTGGGGGT------CACGACTGGGTTCTCCGGTACTACCCAAACGGCTGCGACAGCAAACATTATGAAGC
CGGTTCCATATCTGTTTTCCTAGCTCTTGATTCTGATTCCTCCAAGGATGTGAGGGCAAAATTTAGATTCGCTTTGCTC-
-----GACAAGGACGGGGAACCAGTGCGTTCAAAAGGCAAGACCGCCCGCGAACGCATCTTCTCTAGCAAAGGTTCTGAT
AAAGGTTTCAGTAATTTTATCAAGAAATATTTTCTTGAGAA-TTCAGGGCATATAAGAAACGACAGTTTCAACATCCAGT
GCGATGTTACCGTCATGAAGTCTACCCGCAAAGGTAGTCGGTTTAGCTTGGTTCCTCCAAGCAACTTGCGTCAACAACTT
GGTGACCTAGTGAAGAGCATGGATGGAGCCGACGTGACCTTTCATGTCGGCGGGGAGAGTTTCTTGGCTCATAGGGCCGT
GCTCG----CCGCTCGGCCATCCGTGTTCAGGGCGGAGCTCTTTGGCGGCATGAAGGAGAATGCCGGCGGTCCAATTGAA
ATTTGTGATATGGAAAGTGACGTGTTCAAGGCCTTGCGCCACTTCATATACACAGACTGACTATGTGCCTGTTCCCGAGA
TGACTGATGGATGTGGAGCACGAAGAGAAGCGGTGATGGCTGGCCATCTGCTTGTTGCAGCGGACAGGTACAACATTGAG
AGGCTGAAGCTGATATGCGAAGAGAAGTTGTGCGAGCTCATCAACTCTGACATCGTGGCGCCAAGTTTGGCTCTAGCTGA
GCAGCACAGTTTCGATACAATTAAGAAAGCTTGCTTTAAGTTCCTCGCTTCCCCTTCTAATTTGAAGGCGATGATGGCAA
GCGATGGTTACGAGCATCTGAAGAATAGCTGCCCATATGTTCTCAAGGAGCTGGCTGCTAGCTTCCTGCCTGACGAGCTG
AAAGCGGCCAAAGATATTATCATGACAATTTAGTAGTGTGGCTAATCATCACCGCATCTAATC-----------------
--------------------------------------------------------------------------------
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>chr1B_1000
--------------------------------------------------------------------------------
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---------------------------AATGGCAGAGATTTGCAATCTTCCTGCTGCCAATGTAGTGTCATCTCAGGGAA
GTTCATATGTGATCAAGATAGACGAATACTCCAGAATCAAGGGGCAAAGCGA---GCGTGGAAAATATGTGAAATCGACC
CCTTTCAGTGTTGGAGGT------CACGATTGGGTTGTGTGGTATTTCCCAAACGGTTGCCACACCAAAAAGTACGAAGC
CGGTTTCATATATGTTTTTCTAGCTCTTGATTCTGCTGCGTCGAAGAATGTGAGGGCCAATGTTGGATTTAGTTTGTTTC
CTATTGGCAATGAGGTAGAACCAGTGGGTTCATATAACAAGACCG---CCGAACATATCTTCCCTAGCAAAGGTTCAGAT
TGGGGTTTCTCTAACTTTATCAAGAAGGCAAATCTGAGGGA-T-CAATGTATCTAAGGAAAGACAGTCTCAGAATCATGT
GCGATGTTACTGTCGTGAAGTATGGCCACAAGGCTAATCGGCTTAGCTTGGTTCCTCCAAGCAACTTGCATCAACATCTC
GGTGAGCTCCTAAAGAGTAGGGATGGAGCGGATGTGACCTTTCATGTTGGCGGGGAGAGTTTCTTGGCTCATAGGGCCGT
GCTCG----CCGCTCGATCATCTGTCTTCAAAGCGGAGCTCTTCGGTGCTATGAAGGAGGACGCCGATCGCCCAACTGAA
ATCAGTGATATGGAACCTGATGTATTCAGGTCGTTGCTTCACTTCATATACACAGACTCAC----CACCCATTCGTCTGA
TGACCAATGGTGGTAAAGCACGAAGAGATGCGGTCATGGCTGGCCATCTACTTGTTGTAGCTGACAGGTATTACATTGAG
AGGCTGAAGGTGTTTTGTGAAGAGAAGTTATGCAAGCTCCTCGACTCTGACATTGTGGCAACTAGTCTGGCTCTAGCTGA
GCAGCACAAGTCCCGCAGACTCAAGGAAGCTTGCTTTCAGTTCCTCGCTTCTCTTTCCAATTTGAAGGCGATGATGGCAA
GTGATGGTTACGAGCATCTGAAGAATAGTTGCCCATCTGTTCTCAAAGAGCTGGCTGTTAGCTTCCTACCTGCTGAGCTG
AAAGCAGTCAAAGATCATT-------------------------------------------------------------
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>chr1A_1051
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------AA
GTTCATATGTGATCAAGATAGACGGATACTCAAGACTCAAGGGGCAAATCGA---GCATGGAAACTACGTGCAATCTACC
CCTTTCACTGTTGGAGGT------CACGATTGGGCCGTGGAGTATTACCCAAACGGTTGCTACGCCGAAAAGTATGAAGC
CGGTTTCATATCTGTTTTTCTAGCTCTGTATTCTGATGTTTCTAACGATGTGAAAGCGAAAGTTGGATTTAGTCTGCTT-
-----GACAAAGATGGAGAACCACTGGAATCAAAAAGCATGATCACCCATGAGCATATCTTCGATAGCAAAGGTTCAGAC
TGGGGTTTCTCTAATTTTATCAAGGTTGCTGATCTCGAGAGCT-CAGTGTATCTAAGAGACGACAGTTTCAGCATCAGGT
GTGATGTTACGGTTATGAAGCCTGTCCATAAAGTTAATCGGTTTATTGTGGTTCCTCCAAGTAACTTGCACCAGCATCTC
GGTGACCTCCTCATCAGCTTGGATGGAGCGGATGTGACCTTTCGGGTTGGCGGGGAAAGCTTCTTGGCCCATAGGTCCGT
GCTT----GCTGCTCGGTCATTAGTATTCAGGGCGGAGCTCTTTGGCCCCATGAAGGAGAGTGGGAACAGTTTGATTGAA
ATTAGCGATATGGAAAGTGACGTGTTCAAGTCTTTGCTCCACTTCATTTACACTGACTCGC----TGCCTGTTCCTGAGA
CAACTGATGAGGGTGAAACAGGAAGAGAGATGGTGATAGCTGGTCATCTACTTGTTGCGGCAGACAGGTACAACATTGAG
AGGCTCAAGCTGATATGCGAAGAGAAGTTGTGCAACCTCATTGACTCTGACGTCGTGGCGACTAGTTTGGCTCTAGCTGA
GCAGCACGGCTTGCATAGAATCAAGGAGGCCTGTTTTGAGTTCCTCGCTTCGCCTTCCAATTTGGAGACGATGATGGCAA
GTGATGGTTACGAGCATCTGAAGAATAGCTGCCCATCTGTTCTCAGGGAGCTGGCTGCTAGCTTCCTGCCGGCCGAGCTG
AAAGCGGTCAAAGATATTATCATGACAACTTAGTAGTGTAGCTAATGATCACTGCATCTTATCATATTTAGTATCTATGT
TGTTACCTATT---------------------------------------------------------------------
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>chr1D_1414
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---------------------------------------------------TCTAAGAGACGACAGTTTCAGCATCAGGT
GTGATGTTACGGTTATGAAGCCTGTACGTAAAGTTAATCGGTTTATTGCGGTTCCTCCAAGTAACTTGCACCAGCATCTC
GGTGACCTCCTCATCAGCATTGATGGAGCTGATGTGACCTTTCGGGTTGGCGGGGAAAGCTTCTTGGCCCATAGGTCCGT
GCTC----GCTGCTTGGTCATCAGTATTCAGAGCGGAGCTCTTTGGCCCCATGAAGGAGAGTGGGAACAGTCTGATTGAA
ATTAGCGATATGGAAAGTCACGTGTTCAAGTCTTTGCTCCACTTCATTTACACGGACTCAC----TGCCTGTTCCTGAGA
CAACTGATGTGGGTGAAACAGGAAGAGACGTGGCGATGGCTGGTCATCTACTTGTTGCGGCAGACAGGTACAATATTGAG
AGGCTCAAGCTGATATGCGAAGAGAAGTTGTGCAACCTCATTGACTCTGACGTCGTGGCGACTAGTTTGGCTCTAGCTGA
GCAGCACGGCTTGCATAGAATCAAGGAGGCCTGTTTTGAGTTCCTCGCTTCGCCTTCCAATTTGGAGGCG-TGATGGCAA
GTGATGGTTACGAGCATGTGAAGAATAGCTGCCCATCTGTTCTCAGGGAGCTGGCTGCTAGCTTCCTGCCGGCCGAGCTG
AAAGCGGTCAAAGATATTATCAT---------------------------------------------------------
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-----------------------
>SNPs
SSSS-SS-SSSSS---SSS-SSSSSS-SSSSSS-SS-SS-SSSSSS-S-SS-SSS-S--SS-SS--SS-SSSS-SSSS--
SS-SSSSSSSS-SSSSSSSS---SSSS-SSSSSSS--SSS-S-SSSSSS--S--SSSSSSSSSS--SSSSSSSSSSSS-S
SSSSSSS-SSSSSSSSSSSS-S-SSS-SSSSS-SSS-SS---S----------------------S--------------
----------------S---S-----------------S------S-----------S----------------------
---------------S-------------SSSSS-SS-SS----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------S-----------------------------------------
-------------------------------------------------------------------S------------
-----------S--------------------------------------------------------------------
-----------------SSS-S-SSS---SS-SSSSSS-SSS--SSS---------------------------------
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-----S----------------S-------------------------------S-S-----------------------
--------------S-----------------------------------------------------------------
------------------SSSSSS--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S------------S----------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------------S-------------------------------------S--S------------
--------------------------------------------------------------------------------
-------------------S-----------------------------------------SSS----------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
------------------S-------------SSS-SSSSSSS-SSS-SSSSSSS-SS-S-S-SS---------------
--------------------------------------------------------------------------------
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-----------------------------S-----------------S----------------S---------------
---------------SS----S------------------------------------S----SS----------S-SSS
SSSSSSSSSSSS-----------------------------S----------S--------SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS
>forward_81
-------------------------------------------------------------ATTTGCGCCGTGTTTGTGA
C-------------------------------------------------------------------------------
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-----------------------
>reverse_3743
--------------------------------------------------------------------------------
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--------------------------------------------------------------CAGAGGCGATGATGGCAA
GT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------
>forward_2899
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------C
CCTTTCAGTGTTGGAGGCT-------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------
>reverse_6978
--------------------------------------------------------------------------------
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-----------------AGTGACTGGCATCGCAATGA-------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------
