>input_sequence_60369
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-------------------------------------ATGTCGACCCCGGGCGCCGCCTACTACGCTTCCCTCGCGCGCA
AGCAGTACTTCTGCTACCAATGCAACCGCACCGTCCTCATCGCCGCCTCCGCCGCGGCCGCCGGCGAGCTCTCATGCCCC
GACTGCCGCGGCGACTTCCTGGAGGAGGTCACCGTCCCCGCCCCCACCATCCTCCCCTTCCCCTTCGCCTTCCCCCCTAT
GATGCCCACCGCCTCCTCCCCGTCCCGATCCTCCTCCTCCTCCACCGCCGCGCCCCCCTCCAGCGACCTCTCCAACTTCC
TCACCAGCATCCTCGACCTCCAGGAGGGCCGCCGCGTTAGGTCCAGGAGCGGGAGCGGTGCCGCCTCGGCCGCTGGCACG
GCCACGCCTGAGAACGAGCCGGAGTCCTTCGACCCGCTCGTGTTTTTCCAGAACTACATCCACACCCTCATGGAGGGGGG
CGCCAACATCCAGGTGCTCCTCGACGACGCCAGCGTCAACCTCGCCCCCGGCCTAGGCGGCCGTGCCGGTGGGACAAGCT
ACGGGGACTACTTCGTCGGCCCGGGACTGGAGCAACTCATCGAGCAGCTCGCCGAGAACGATCCCAACCGCTATGGCACG
CCGCCGGCTGCCAAGTCCGCCCTGACCACTCTTCCTGACGTCGTTGTCACCGATGCCATGGTTGCGGCGGCAGAGGGCGC
CGAGTGTGCTGTGTGCAAGGAAGATTTCTCACCTGGAGATGGGGCCAAGCAGATGCCCTGCAAGCATATCTACCACGCAG
ATTGCATCGTACCCTGGTTGGAGCTCCACAATTCGTGCCCCATTTGTCGCTTTGAGCTGCCCACCGATGATCCTGATTAT
GAGGGCAATAAGGCCTCAAACGCACAGTCAGCTGTTGGTATCGCTGCT---GCTGCTGCATCTGGGAGCTCTGGTGCTGC
TGAGGAAGGAGGGGAGGAGAGTGGGGAGGCTGCAAGGGTGGTGGAAAGGAGATTCAATGTGTCATTGGCTTGGCCGTTTG
GTGGATTGGCAGGTCAAACACCACAGCAAGATGGGAACAATGCCGGTGCTGGCAGTAGCTCACAGGACAGCGGTTCGCAG
GATGGAGCTGGTGGCAGTAACAAAAATTGA--------------------------------------------------
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>chr1B_1_TraesCS1B01G179000
CCCATAGTACAAGGAAGGAGTCAATCTGTCGATCCTCAGTTTTCTTGTTACAGTATGAGGAGGATCTCCACACATGTGTG
CTTGGGAGTGTACCTGATCCGAAAGGCAAAAATGCTCTAGCCCAGGTAGGACATGATGCAGTTCATGGACCCAGAGTGTG
TATACATGG-GGAGGAGCCTGAGGCGCCTGCATCAGATCAGTGGGATCCCCTAGAGACGGGTACAGTTAAACTTAACACG
GATACATGTTTTTTGGCTGCTAATGGGTCCTCTCAGGTCGGTGCAATCGCTCGCGATCATTGGGGTGTGGTTCTCTTCTC
ACTATCCGAACGAGGGGG-GCATTGTAAATCTGTAGAGGAAGCTGAGGCGCAATCAA-CCTAGCTGGTCTGAATGTGATG
TCGGAGCTGCACAACGGCTCCCTCATACTGGAGACGGATTGCAAAGCCTTGGCCGATAATCTGAATTTGGGCGGCAGATG
TTTGTCAGCGTGCTTTCCAGTGATCGAGGATATCAAACAGGAATTCACTAAATTCAGCAATGTGAAAGTTCAGTACGCCA
ACAGGAAGAAGAATATGATGGCCCATTTACTGGCTGCCCGTGCTAGGACGATGGGAGACCTGCTATGTGTGCCGGGAGTA
CCGGAGGACCTGTTGGGCGACCTGATTGCCGACTTTGGGTTGGCTGAAGAGTAATTTTGTTACTCTTGTACCTCAAAAAA
AAAAAGGAAAGAATACTGGTAGTCAGTTAAATGTTTGACACGAAATCAACCCGATTAACAAAATTCAAACCAAACTCTGA
CACCTGACGTGTTG-----TAATCGAATCAATCGGAAACTAACTAACCTCTT--------GGCCGCAAGGAAACACCGTC
CGGGGTCACCGCCG------------------------------------------------------------------
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---------------------------------------------------------------------------CTCTT
GATAAAATCGGAGAAACCCAGAAAAAAAAGGACTAAACGAGATACTGAGAGCCGAAGACCTAAATTCCGTAGAGAAAACT
CGCATCGCCGCCGCTGCCTAGATCGCCGGGCGCCGCCATGTCGACCCCGGGCGCCGCCTACTACGCTTCCCTCGCGCGCA
AGCAGTACTTCTGCTACCAATGCAACCGCACCGTCCTCATCGCCGCCTCCGCCGCGGCCGCCGGCGAGCTCTCATGCCCC
GACTGCCGCGGCGACTTCCTGGAGGAGGTCACCGTCCCCGCCCCCACCATCCTCCCCTTCCCCTTCGCCTTCCCCCCTAT
GATGCCCACCGCCTCCTCCCCGTCCCGATCCTCCTCCTCCTCCACCGCCGCGCCCCCCTCCAGCGACCTCTCCAACTTCC
TCACCAGCATCCTCGACCTCCAGGAGGGCCGCCGCGTTAGGTCCAGGAGCGGGAGCGGTGCCGCCTCGGCCGCTGGCACG
GCCACGCCTGAGAACGAGCCGGAGTCCTTCGACCCGCTCGTGTTTTTCCAGAACTACATCCACACCCTCATGGAGGGGGG
CGCCAACATCCAGGTGCTCCTCGACGACGCCAGCGTCAACCTCGCCCCCGGCCTAGGCGGCCGTGCCGGTGGGACAAGCT
ACGGGGACTACTTCGTCGGCCCGGGACTGGAGCAACTCATCGAGCAGCTCGCCGAGAACGATCCCAACCGCTATGGCACG
CCGCCGGCTGCCAAGTCCGCCCTGACCACTCTTCCTGACGTCGTTGTCACCGATGCCATGGTTGCGGCGGCAGAGGGCGC
CGAGTGTGCTGTGTGCAAGGAAGATTTCTCACCTGGAGATGGGGCCAAGCAGATGCCCTGCAAGCATATCTACCACGCAG
ATTGCATCGTACCCTGGTTGGAGCTCCACAATTCGTGCCCCATTTGTCGCTTTGAGCTGCCCACCGATGATCCTGATTAT
GAGGGCAATAAGGCCTCAAACGCACAGTCAGCTGTTGGTATCGCTGCT---GCTGCTGCATCTGGGAGCTCTGGTGCTGC
TGAGGAAGGAGGGGAGGAGAGTGGGGAGGCTGCAAGGGTGGTGGAAAGGAGATTCAATGTGTCATTGGCTTGGCCGTTTG
GTGGATTGGCAGGTCAAACACCACAGCAAGATGGGAACAATGCCGGTGCTGGCAGTAGCTCACAGGACAGCGGTTCGCAG
GATGGAGCTGGTGGCAGTAACAAAAATTGAACACAAATCTGTGATCAGTTGGAGGTATTTACATCTTTAAACACAGCCTT
TTGTATC-GGATGCA----ACTTGGTAGACTAGATTATATCCTGTTAATAACTCTTTGATTGTAGCAGAAATTGCTTCAA
TTCCTGTTTACTATTCTTTTCTTGACTAGTGGAGAAAGAACTACCCATGTTTACAGAATAGTTTGCTAAATGCAATTACA
TTTCATAATCATAAACGGTTAGGACTTAAAAGCTGGAGATGCTATAGTACAAACTTGACTGTTCACATCAATTTCAGGCA
TATCTCTGATGTGGTGGTTTTGTGTCATTGTAGTATCAGCA---------------------------------------
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-----------------------------------ACAGTTGCATATGCTCATTAAGACTTGTATATAAGTTTGTAATAA
TAAGCTATTCGTATTAAACAGTAGGAAGGTGTTATCACAATGATACACTACTGAAATTTTATTTGATGACCAAGCCTATC
TTCTACTTATAGAGGTTTGTTGGTTTGCTCGAAACATATCATAACAAATTTCGTAAGAAACAAAAAA---GCTGTCGCTG
CATTTTGATGTCGTTTATCCTCTCCACGTGGATGATTTAGGAAGAGGAACAATATAATTTTTTT--CCCAGAATGATCAC
AACACGCTGATGCAGATCTTAGGCGCAGTCAGGGATGAGCTTTGCCAGTGGTGCGCACTTGGGAGCCCTAGGCATCTAAG
TTCCCATAGTGGCTCCAGTTAATCATCAATGCACAAACCTTATAGGCTAACACATTTTCGTTCTGGCCGTTTTCTCTTTT
ATTTTGACTAGAAGATAGTTGCCTGTGTGTTGCAACGGGGGAATAAATATTATAGTAGAGATTTACCTGCCCATATTTGG
TAAGCACTTATTATCTTACCAAAGAAAACAGAATTTTATTCGGCAAGTCAATAAATGGTGGGGCAGGGAGGTAGTCTTTA
TGGAAAAACCGATAGAAAAACCAGAGACGAGAGGGAAAAAATTAAAA-------AGGGAGAGGAAGGAGGGGATGTACGT
A--
>chr1D_1
CCCATAGTACAGGGAAGGAGTCCATCTGCCGATCCTTAGTTTTCTTGTTACAGTATGAGGAGGATCTCCACAAATGTTTG
GTTGGGAGTGTACCTGATCCCAAAGGCAAAAATGCTCTAGTCCAGGCAGGACATGGTGCAGCTCAGGGACCCAGGATGTG
TATTAATGG-GGAGGAGTCTGAGGCGCCTGCAACCGATCATTGGGATCCCCCAGAGGCAGGTACAGTTAAACTTAACACG
GATGCGGGATTTTTGGCTGCTGATGGGTCCTCTCAGGTCGGTGCAATCGCTCGTGACCATCGGGGTGTGGTACTCTTCAC
TCTATCCGAACGAGGGGG-GCATTGCAAATCTGTGGAGGAAGCTGAGGCGCAATCAATCCTAGCTGGCCTGAATGTGATG
TAGAAATTGCACAATGGTTCCCTCATACTGGAGACGGATTGCAAAGCCATGGCGGATAATCTGAACTTGGGGGGCAGGTG
CTTGTCGGCATGTTTTCCAGTGATCTAGGATATCAAACAGGAATTCACTAAATTCAGCAATGTGAAAGTTCAGCACGCCA
ACAGGAAGAAGAACATGATGGCCCATGTACTGGCTGCCCGTGCTAGGACGAAGGGAGACCTGCTATGTGTGCCGGGAGTA
CCGGACGACCTGTTGGGCGTCCTGAATGCCGACCTTGGGTTGGCTGAAGAGTAATTCTCTTACTCTTGTACCTCAAAAAA
AA------------------------------------------------------------------------------
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---
>chr5D_1
CCCATAGTACAGGGAAGGAGTCCATCTGTCGATCCTCAGTTTTCTTGTTACAGTATGAGGAGGATCTCCACAAATGTTTG
GTTGGGAGTGTACCTGATCCCAAAGGCAAAAATGCTCTAGTCCAGGCAGGACATGGTGCAGCTCAGGGACCCAGGATGTG
TATAAATGG-GGAGGAGTCGGAGGCGCCTGCAACCGATCATTGGGATCTCCCAGAGGCGGGTACAGTTAAACTTAACACG
GATGCGGGATTTTTGGCTGCTGATGGGTCCTCTCAGGTCGGTGCAATCGCTCGTGACCATCGGGGTGTGGTACTCTTCTC
TCTATCCGAACGAGGGGG-GCATTGCAAATCTGTGGAGGAAGTTGAGGCGCAATCAATCCTAGCTGGCCTGAATGTGATG
TCAAAATTGCACAACGGTTCCCTCATACTGGAGACGGATTGCAAAGCCATGGCGGATAATCTGAATTTGGGGGGCAGGTG
CTTGTCGGCATGGTTTCCAGTGATCGAGGATATCAAACAGGAATTCACTAAATTCAGGAATGTGAAAGTTCAGCACGCCA
ACAGGAAGAAGAACATGATGGCCCATGTACTGGCTGCCCGTGCTAGGACGAAGGGAGACCTGCTATGTGTGCCGGGAGTA
CCGGACGACCTGTTGGGCGTCCTGAATGCCGACCTTGGGTTGGC-----AGTAATTCTCTTACTCTTGGACCTCAAAAAA
AAAA----------------------------------------------------------------------------
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---
>chrUn_1
CCCACAATACAGGGAAGGAGTCCATCTGTCGATCCTCAGCATTCTTGTTACAGTATGAGGAGGATCTCCATAAGTGAGAG
GCTGGGAGTGTACCTGATCCTAAAGGCAAAAATGCTCTAGTTCAGGTAGGACGTGAGGCTGCTCATGGACCAAGGGTGGG
TACACA--G-GGGGGAGTCGGAGGCGCCTGCATATGATCAGTGGGATCCCCCAGAGGCGGGCACTGTTAAACTTAACACG
GATGCAGGATTTTTGGCTGCTAATGGGTCCTCTCAGGTTGGTGCAATCGCTCGCAATCATCGGGGTGTGGCTCTCTTCTC
TCTTGCCGAACGAGGGGG-GCACTGCAATTCTGTAGAGGAGGCTGAGGCGCAAGCAATCCTAGCCGGCCTGAAGGTGTTG
TCGGAGCTGCACCATGGTCCCCTCATACTGGAGACGGATTGCAAAGCCTTGGCGGATATGCTGAATTTGGGCAGCAGGTG
TTTGTTGGCGTGCTTTCCAGTGATCGAGGATATCAAACAAGAATTCGCTAATTTCAGCATGGTGAATGTTCAGTACGCCA
ACAGGAAGAAGAACAAGATGGCCCATTTACTGACTGGCCGTGCTAGGACGATGGGAGACCTTCTATGTATGCCAGGAGTA
CCGGACGACCTGTTGGGTGACCTGATCGCCGACTTTGTGTTGGCTGAAGAGTAAACTTGTTACTCTTGTACCTCAAAAAA
GAAA----------------------------------------------------------------------------
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---
>chrUn_1
CCCACAATACAGGGAAGGAGTCCATCTGTCGATCCTCAGCATTCTTGTTACAGTATGAGGAGGATCTCCATAAGTGAGAG
GCTGGGAGTGTACCTGATCCTAAAGGCAAAAATGCTCTAGTTCAGGTAGGACGTGAGGCTGCTCATGGACCAAGGGTGGG
TACACA--G-GGGGGAGTCGGAGGCGCCTGCATATGATCAGTGGGATCCCCCAGAGGCGGGCACTGTTAAACTTAACACG
GATGCAGGATTTTTGGCTGCTAATGGGTCCTCTCAGGTTGGTGCAATCGCTCGCAATCATCGGGGTGTGGCTCTCTTCTC
TCTTGCCGAACGAGGGGG-GCACTGCAATTCTGTAGAGGAGGCTGAGGCGCAAGCAATCCTAGCCGGCCTGAAGGTGTTG
TCGGAGCTGCACCATGGTCCCCTCATACTGGAGACGGATTGCAAAGCCTTGGCGGATATGCTGAATTTGGGCAGCAGGTG
TTTGTTGGCGTGCTTTCCAGTGATCGAGGATATCAAACAAGAATTCGCTAATTTCAGCATGGTGAATGTTCAGTACGCCA
ACAGGAAGAAGAACAAGATGGCCCATTTACTGACTGGCCGTGCTAGGACGATGGGAGACCTTCTATGTATGCCAGGAGTA
CCGGACGACCTGTTGGGTGACCTGATCGCCGACTTTGTGTTGGCTGAAGAGTAAACTTGTTACTCTTGTACCTCAAAAAA
GAAA----------------------------------------------------------------------------
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---
>chrUn_1
CCCACAATACAGGGAAGGAGTCCATCTGTCGATCCTCAGCATTCTTGTTACAGTATGAGGAGGATCTCCATAAGTGAGAG
GCTGGGAGTGTACCTGATCCTAAAGGCAAAAATGCTCTAGTTCAGGTAGGACGTGAGGCTGCTCATGGACCAAGGGTGGG
TACACA--G-GGGGGAGTCGGAGGCGCCTGCATATGATCAGTGGGATCCCCCAGAGGCGGGCACTGTTAAACTTAACACG
GATGCAGGATTTTTGGCTGCTAATGGGTCCTCTCAGGTTGGTGCAATCGCTCGCAATCATCGGGGTGTGGCTCTCTTCTC
TCTTGCCGAACGAGGGGG-GCACTGCAATTCTGTAGAGGAGGCTGAGGCGCAAGCAATCCTAGCCGGCCTGAAGGTGTTG
TCGGAGCTGCACCATGGTCCCCTCATACTGGAGACGGATTGCAAAGCCTTGGCGGATATGCTGAATTTGGGCAGCAGGTG
TTTGTTGGCGTGCTTTCCAGTGATCGAGGATATCAAACAAGAATTCGCTAATTTCAGCATGGTGAATGTTCAGTACGCCA
ACAGGAAGAAGAACAAGATGGCCCATTTACTGACTGGCCGTGCTAGGACGATGGGAGACCTTCTATGTATGCCAGGAGTA
CCGGACGACCTGTTGGGTGACCTGATCGCCGACTTTGTGTTGGCTGAAGAGTAAACTTGTTACTCTTGTACCTCAAAAAA
GAAA----------------------------------------------------------------------------
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>chrUn_1
CCCACAATACAGGGAAGGAGTCCATCTGTCGATCCTCAGCATTCTTGTTACAGTATGAGGAGGATCTCCATAAGTGAGAG
GCTGGGAGTGTACCTGATCCTAAAGGCAAAAATGCTCTAGTTCAGGTAGGACGTGAGGCTGCTCATGGACCAAGGGTGGG
TACACA--G-GGGGGAGTCGGAGGCGCCTGCATATGATCAGTGGGATCCCCCAGAGGCGGGCACTGTTAAACTTAACACG
GATGCAGGATTTTTGGCTGCTAATGGGTCCTCTCAGGTTGGTGCAATCGCTCGCAATCATCGGGGTGTGGCTCTCTTCTC
TCTTGCCGAACGAGGGGG-GCACTGCAATTCTGTAGAGGAGGCTGAGGCGCAAGCAATCCTAGCCGGCCTGAAGGTGTTG
TCGGAGCTGCACCATGGTCCCCTCATACTGGAGACGGATTGCAAAGCCTTGGCGGATATGCTGAATTTGGGCAGCAGGTG
TTTGTTGGCGTGCTTTCCAGTGATCGAGGATATCAAACAAGAATTCGCTAATTTCAGCATGGTGAATGTTCAGTACGCCA
ACAGGAAGAAGAACAAGATGGCCCATTTACTGACTGGCCGTGCTAGGACGATGGGAGACCTTCTATGTATGCCAGGAGTA
CCGGACGACCTGTTGGGTGACCTGATCGCCGACTTTGTGTTGGCTGAAGAGTAAACTTGTTACTCTTGTACCTCAAAAAA
GAAA----------------------------------------------------------------------------
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>chr3A_4
---ATAGTATAGGGAAGGAGTCAATCTGTCGATCCTCAGTTTTCTTATTACAGTATGAGGAGGATCTCCACAAATGTTTG
GTTGGGAGTGCTCCTGATCCCAAAGGAAAAAATGCTCTAGTCCAGGTAGGACATGGTGCAGTTCAGGGACCCAGGATGTG
TATTCAT-G-GGGGGATTCTGAGGCGTCTGCAACCGATCATTGGGACCCCCTAGAGGCGGGTACAGTTAAACTTAACACG
GATGTGGGATTTTTGGCTACTGATAGGTCCTCTCAGGTCAGTGCAATCGCTTGCGACCATCAGGGTGTGGTTCTCTTCTC
TCTATCCGAACGA-GGGG-GCATTGCAAATCTGTAGAGGAAGCTGAGGCGCAATCAATCCTAGCTGGCCTGAGTGTGATG
TCGGAGCTGCACAATGGCCCCCTCATAGTGGAAACGGATTGCAAAGCCATGGAGTTTAATCTGAACTTGGGGGGCAGGTG
TTTGTCGGTATGCTTTCTAGTGATCGAGGATATCAAACAGGAATTCACAAAATTCAGCAATGTGAAAGTTCAGCACGCCA
ACAGGAAGAAGAACATGATGGCCCATTTACTGGCTGCCCGTTCTAGGATGATGGGAGACCTGCTATGTGTGCCGGGAGTA
CCGGACGACCTGTTGGGCGACCTGAGTGCCGACTTTGGGTTGGCTGAAGAGTAATTTTGTTACTCTTGTACCTCAAAAAA
AAGAA---------------------------------------------------------------------------
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>chr1B_8
-------TACAGGAAAGGAGTCCATATGTCGATCCTCAGCATTCTTGTTACAGTATGAGGAGGATCTCCATAAGTGTGAG
GCTGGGAGTGTATCTGATCCTAAAGGCAAAATTGCTCTAGTTCAGGTAGGACGTGAGGCTGCTCATGGGCCAAGGGTGGG
TACACA--GGGGGGGAGTCGAAGGCGCCTGCATCTGTTCAGTGGGATCCCCCAGAGGCGGGCACTGTTAAACTTAACACG
GATGCAGGATTTTTGGCTGCTAATGGGTCCTCTCAGGTCGGTGCAATCGCTCGCAATCATCGGGGTATGGCTCTCTTCTC
TCTTTCCGAACGA-GGGGGGCACTGCAATTCTGTTGAGGAGGCTGAGGCACAAGCAATCCTAGCCGGCCTGAAGGTGTTG
TCGGAGCTGCACCATGGTCCCCTCATACTGGAGACGGATTGCAAAGCCTTGGCGGATATGCTGAATTTGGGTGGCGGGTG
TTTGTCGGCGTGCTTTCCAGTGATCGAGGATATCAAACAGGAATTTGCTAATTTTAGCATGGTGAATGTTCAGTATGCTA
ACAGGAAGAAGAACAAGATGGCCCATTTACTGGCTGGCCGTGCTAGGACGATGGGAGATCTTCTATGTATGCCGGGAGTA
CCGGACGACCTGTTGGGTGACCTGATCGCCGACTTTGTGTTGGCTGAAGAGTAAACTTGTTACTCTTGTACCTCAAAAAC
AAA-----------------------------------------------------------------------------
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>chr3B_25
------------------------TCTGTCGATCCACATTTTTCTTGATACAGTATGAAGAGGACCTCCTCAAGTGCATT
GCTGGAAGTGAACCTGACCCAAAAGGTAAAGAAACAGGAGTCCAGGCAGTACGTGGTGTAGCTAAGGAAGCCAGGCAGTG
TATGCATGG-GGAGGAGGTGGAGGCGTTTGCAACCAATCATTGGGATCCCCGAGAGGCAAGTACAATCAAACACAATATG
GATGCGGCATTTTTAGCTGCTAATGGGACCTCTCAGGTCGGTGCAATCGCTCGCGATCATCGTGGTGTTGTCCTCTTCTC
ACTGCCTGAATGA-GGGGAGCAATGCAAATCTGTAGAGGAAGCGGAGGCGCAGTAACTTCTAGCAGGTCTGAAAGTCCAG
TCGGAGCTGTACAACGGTTATTTGTTACTGGAGACGAACTGCAAAGTCATGCTGGATAATCTGAAGTTGGGGGGCAGGTG
TTTGTCGGCCTGTTTTCCGGTGCTCGAGGATATCAAACATGAATTCACCAAGTTCAGCAATGTGAAAGTTCAGCATGCTA
ACAGGAAGAAGAACATAATTGCACATCTGCTGGCTGCCCGCGCTAGGACGATGGGAAATCTGCAATGTGTGCCAGGACTA
CCAGACGACCTGTTGGATGCTGTGGCTGCCGACTGTGGGTTGGCTGAAGAGTAATTGTTTTACTCTTGTACCTCAAAGAG
AAAA----------------------------------------------------------------------------
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------------------------------GGAGAAAGA-----------------------------------------
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---
>chr1A_714
AAAAAGAAAGG---------------------------------------------------------------------
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---------AGAATACTGGTAGTCAGTTAAATGTTTGACACGAAATCAACCCGATAAACAAAATTCGAACCAAACTCTGA
CGCCTGACGTGTTGTAATCTAATCGAATCAATCGGAAACTAACTAACCTCTCCTCCTCTGGGCCGCAAGGAAACACCGTC
CGGGGTCACCGCCG------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CTCTT
GATAAAATCGGAGAAACCCAGAAAAAA-AGGACTAAACGAGATACTGAGAGCCGAAGACCTAAATTCCATAGAGAAAACT
CGCATCGCCGCCGCTGCCTAGATCGCCGGGCGCCGCCATGTCGACCCCGGGCGCCGCCTACTACGCTTCCCTCGCGCGCA
AGCAGTACTTCTGCTACCAATGCAACCGCACCGTCCTCATCGCCGCCTCCGCCGCGGCCGCCGGCGAGCTCTCATGCCCC
GACTGCCGCGGCGACTTCCTGGAGGAGGTCACCGTCCCTGCCCCCACCATCCTCCCCTTCCCCTTCGCCTTCCCCCCTAT
GATGCCCACCGCCTCCTCCCCGTCCCGATCCTCCTCGTCATCCGCCGCCGCGCCCCCCTCCAGCGACCTCTCCAACTTCC
TCACCAGCATCCTCGACCTCCAGGAGGGCCGCCGCGTTAGGTCCAGGAGCGGGAGCGGGGCCGCCTCGGCCGCTGGCACG
GCCACGCCTGAGAACGAGCCGGAGTCCTTCGACCCGCTCGTGTTTTTCCAGAACTACATCCACACCCTCATGGAGGGGGG
CGCCAACATCCAGGTGCTCCTCGACGACGCCAGCGTCAACCTCGCCCCTGGCCTAGGCGGCCGTGCCGGTGGGACAAGCT
ACGGGGACTACTTCGTCGGCCCGGGACTGGAGCAACTCATCGAGCAGCTCGCCGAGAACGATCCCAACCGCTACGGCACG
CCGCCGGCTGCCAAGTCCGCCCTGACCACTCTTCCTGACGTCGTTGTCACCGATGCCATGGTTGCGGCGGCAGAGGGCGC
CGAGTGCGCTGTGTGCAAGGAAGATTTCTCACCTGGAGATGGGGCCAAGCAGATGCCCTGCAAGCATATCTACCACGCAG
ATTGCATTGTACCCTGGTTGGAGCTCCACAATTCGTGCCCCATTTGTCGCTTTGAGCTGCCCACCGATGATCCTGATTAT
GAGGGCAATAAGGCCTCAAACCCACAGTCAGCTGTTGGTATCGCTGCTGCTGCTGCTGCATCTGGGAGCTCTGGTGCTGC
TGAGGAAGGAGGGGAGGAGAGTGGGGAGACTGCAAGGGTGGTGGAAAGGAGATTCAATGTGTCATTGCCATGGCCGTTTG
GTGGATCGGCAGGTCAAACACCACAGCAAGATGGGAACAATGCCGGTGCTGGCAGTAGCTCACAGGACAGCGGTTCGCAG
GATGGAGCTGGTGGCAGTAACAAAAATTGAACACAAATCTGTGATCACTTGGAGGTATTTACATCATATAACACAGCCTT
TTGTATCAGGATGCAATTTACTTGGTAGACTAGATTATATCCTGTTCATAACTCTTTGATTGTAGCTGAAATTGCTTCAA
TTCCTGTTTACTATTCTTTTCTTGACTAGTAGAGAAA-AACTACTCATTTTTACATAATAGTTTGCTAAATGCAATTACA
TTTCATAATCATAAACGGTTAGGACTTGAAAGCTGGAGATGCTATAGTACAAACTTGACTGCTCGCATCAATTTCAGGCA
TATATCTGATCTGGTGGTTTTGTGTCATTGTAGTATCGGCC---------------------------------------
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-----------------------------------ACAGTTGCATATGCTTGTTAAGACTTGTATATAAGTTCG---TAA
TAAGCTATTCGTATTAAACAGTAGGAAGCTGTTATCACAATGATACACTACTGAAATTTTATTTGATGAGCAAACCTATC
TTCTACTTATAGAGGTTTGTTGGTTTGCTTGAAACATTTCATAACAAATTTCGTAAGAAACAAAAAAAAAGCTGTCGCTG
CATTTTGATGTCGTTTATCCTCTCCACGTGGATGATTTAGGAAGAGGAACAACATAGTTTT-------------------
AACAAGCTGATGCAGATCTTAGGCGTGGTCAGGGATGAGCTTCGCCATTGGTGCGCACCTGGGAGCCCTAGACATCTAAG
TTCCCATGGTGGCTCCAGTTAATCATCAATGCACAAACCTTATAGGCTAACACATTTTCGTTCTGGCCGTTTTCTCTTTT
ATTTTTGACT--AGATAGTTGCCTGTGTGTTGCAACGGTGGAATAAATATTATAGTAGAGATTTACCTGCCCATATTTGG
TAAGAACTTATTAGCTTACCAAAGAAAACAGAATTTTATTCGGCAAGTCAATAAATGGTGGGGCAGGGAGGCGGTCTTCA
GGGAAG-ACCGATAGAAAAACCAGAGATGGGAGGGAAAAAATTAGAA------GAGGGAGAGGAAGGAGCGGATGTACGT
A--
>chr1D_714
AAAAAGAAAGG---------------------------------------------------------------------
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---------AGAATACTGGTAGTCAGTTAAATGTTTGACACGAAATCAACCCGATTAACAAAATTCAAACCAAACTCTGA
CGCCTGACGTGTTGTAATCTAATCGAATCAATCGGAAACTAACTAACCTCT---CCTCTGGGCCGCAAGGAAACACCGTC
CGGGGTCACCGCCGTTAGGAAAAGAATTCTATGAGACCAGGTCTCACGCAAGACCCGTCCTGATGGATGACACATGGCAT
TCACAAATCACAAAGCATCCATCCCACCCCCCACTTAAATCAGGGGAGGAGAGATTAAATGCTTTGAGATTTGTGAATGC
CACGTGTCATCCATCAGGGCGGGTCTCACATGCTAACCGTGAGACCTGGTCTCATATAATTTTTTTTCCCCGCCGCTCTT
GATAAAATCGGAGAAACCCAGAAAAAA-AGGACTAAACGAGATACTGAGAGCCGAAGACCTAAATTCCGTAGAGAAAACT
CGCATCGCCGCCGCTGCCTAGATCGCCGGGCGCCGCCATGTCGACCCCGGGCGCCGCCTACTACGCTTCCCTCGCGCGCA
AGCAGTACTTCTGCTACCAATGCAACCGCACCGTCCTCATCGCCGCCTCCGCCGCGGCCGCCGGCGAGCTCTCATGCCCC
GACTGCCGCGGGGACTTCCTGGAGGAGGTCACCGTCCCCGCCCCCACCATCCTCCCCTTCCCCTTCGCCTTCCCCCCTAT
GATGCCCACCGCCTCCTCCCCGTCCCGATCCTCCTCCTCCTCCACCGCCGCGCCCCCCTCCAGCGACCTCTCCAACTTCC
TCACCAGCATCCTCGACCTCCAGGAGGGCCGCCGCGTTAGGTCCAGGAGCGGGAGCGGTGCCGCCTCGGCCGCTGGCACG
GCCACGCCTGAGAACGAGCCGGAGTCCTTCGACCCGCTCGTGTTTTTCCAGAACTACATCCACACCCTCATGGAGGGGGG
CGCCAACATCCAGGTGCTCCTCGACGACGCCAGCGTCAACCTCGCCCCTGGCCCAGGCGGCCGTGCCGGTGGGACAAGCT
ACGGGGACTACTTCGTCGGCCCGGGACTGGAGCAACTCATCGAGCAGCTCGCCGAGAACGATCCCAACCGCTACGGCACG
CCGCCGGCTGCCAAGTCCGCCCTGACCACTCTTCCTGACGTCGTTGTCACAGATGCCATGGTTGCGGCGGCAGAGGGTGC
CGAGTGTGCTGTGTGCAAGGAAGATTTCTCACCTGGAGATGGGGCCAAGCAGATGCCCTGCAAGCATATCTACCACGCAG
ATTGCATTGTACCCTGGTTGGAGCTCCACAATTCGTGCCCCATTTGTCGCTTTGAGCTGCCCACCGATGATCCTGATTAT
GAGGGCAATAAGGCCTCAAACCCACAGTCAGCTGTTGGTATCGCTGCTGCTGCTGCTGCATCTGGGAGCTCTGGTGCTGC
TGAGGAAGGAGGGGAGGAGAGTGGGGAGACTGCAAGGGTGGTGGAAAGGAGATTCAATGTGTCATTGCCATGGCCGTTTG
GTGGATCGGCAGGTCAAACACCACAGCAAGATGGGAACAATGCCGGTGCTGGCAGTAGCTCACAGGACAGCGGTTCGCAG
GATGGAGCTGGTGGCAGTAACAAAAATTGAACACAAATCTGTGATCACTTGGAGGTATTTACATCATATAGCACAGCCTT
TTGTATC-GGATGCAATTTACTTGGTAGACTAGATTATATGCTGTTCATAACTCTTTGATTGTAGCTGAAATTGCTTCAA
TTCCTGTTTACTATTCTTTTCTTGACTAGTAGAGAAAGAACTACTCATTTTTACAGAATAGTTTGCTAAATGCAATTACA
TTTCATAATCATAAACGGTTAGGACTTGAAAGCTGGAGATGCTATAGTACAAACTTGACTGCTCACATCAATTTCAGGCA
TATATCTGATCTGGTGGTTTTGTGTCATTGTAGTATCAGCAACAGTTTATTTTTTTGCATGGTAATACGTGTCTCATTTA
TATCATAACGACCATAGTATAAGTCACGTACATACCGACCTGACAAAACTGAAAAGACAGTAGAACGCTAGCCTTTGCAC
ATAGGAACATCAGCCAAGAAGTAAAATTACAAACAAGACTGAAGAATCCTCTGAGCTTGACACCAACGCCCGTCACCTGC
CTCTGGCACCACCATAGCAGCCACCAAAGGAGAAAATGACGGATCACCTCCACACCCGAGCTCGACGCGGCTCCATCGCT
GATATGCAGCTTTGCGGACCTCCAAGGTGGCTCGCCAATAAAGGCGAAGCCATTGCCGTTGAACGAATCAGACCAGGGCA
ACACCCCGGACACGCCATCGAACTCCAGATCTGGCACCCCCGCCCAACTAAGATGTTGGAGGAGGAAACCATACCTGCAT
GCCACGAACCACGAACCCAGATCCACCATCTTCCAGATGCCGTCGATGCAGACCACTATCTGCATCCGCTCCTGGACTAC
CTCCCAAGCTCCACGCCGGCGCTGTAGTATCAGCAACAGTTGCATATGCTTGTTAAGACTTGTATATAAGTTCG---TAA
TAAGCTATTCGTATTAAACAGTAGGAAGCTGTTATCACAA-------------AAAAATTATTTGACGAGCAAGCCTAAC
TTCTACTTATAGAGGTTTGTTGGTTCGCTTGAAACATTTCATAACAAAC---------------AAAAAAGCTCTCGCTG
CATTTTGTTGTTGTTTATCCTCTTCACGTGGATGATTTAGAAAGAGGAACAACATAGTTTCCCCCCCCCAGAATGATCAC
AACACGCTGATGCAGATCTTAGGCATGGTCAGGGATGAGCTTCGCCAGTGGTGCACACCTGGTAGCCCTAGGCATCTAAG
TTCCCATGGTGGCTCCAGTTAT-----------------TTATAGGCTTACACATTTTCGTTCTGGCCGTTTTCTCTTTT
ATTTTTGACT--AGATAGTTGCCTGTGTGTTGCAACGGGGGAATAAATATTATAGTAGAGATTTACCTGCCCATATTTGG
TAAGCACTTATTAGCTTACCAAAGAAAACAAAATTTTATTCGGTAAGTCAATAAATGGTGGGGCAGGGAGGCGGTCTTTA
GGGAAAAA-CGATAGAAAAACCAGAGATGAGAGGGAAAAAATAAAAATAAAAAGATGGAGAGGAAGGAGGGGGGATGTAC
GTA
>SNPs
-----------S------------------------------------------------------------S-------
S-------------------S-------------------S---------------------------------S-----
-----------------S----------------S---------------------S-----------------------
---S--S-S---------------------------------------------------S-------------------
-------------------------S------------------------------------------------------
-----------------------------------------------------S-----------------------S--
------S-------------------------------------------------------------------------
-------------S------------------------------------------------------------------
-----S--------------------------------------------------------------------------
-----SSSS-----------------------------------------------------------------------
-S-------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
---------------------S----------------------------------------------------------
----------------------------S--------------------------------------S-S----------
------S-------------------------------------------------------------------------
-----------------------------------------------S-----------------S-SS-----------
----------------------------------------------S-------------------S-------------
--------------------------------------------S---S-------------------------------
---------------------------S---------------------------------S------------------
---S------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------SS--------------------S-SSS---
----------------------------S----------------------------------------S----------
-----------------------------S-------S------------------------------------------
----------------------------------------------------S---S----SSS----------------
-------------------------SS---------------S---------------S---------------------
-------S------------------------------------------------------------------------
-----SSSSSSS--------------------------------------------------------------------
-------------S---------------------------------------------------------SS-------
S--------------------------S----------------------------------------------------
---
>forward_478
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------ATCTGAATTTGGGCGGCAGA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>reverse_2247
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TGGCAGGTCAAACACCACAG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>forward_1834
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GAGAACGATCCCAACCGCTAT------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>reverse_3547
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------AGTCAGGGATGAGCTTTGCC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
