>input_sequence_60304
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-AACTAGTAAAACTGTGAGAAAAAAACTTTTGTTTGCCACCCTCTTCCCATCTGACGTCCGCCAAGTAATTTCTGATAAA
ATAATA---TAGATTGTGAAAAATTACCCTTATTATCGGTAGATTTTTATTGCGGTTCTGAAAAGTGGGGGCAAAATCGG
ATCTACAACGCGAATGTGGTTTTGCAACTCACACCC---ACAAGCGGCGTCAAGGTTCTACTCTTCTTCAGTGCGCAGCC
CTAAGTGTGACTCCATCTCTGCAATCTGCGCTGCGCGTGCGACGTCGAAGACATCGACATGGACGCGCCGAGGGGTACCC
CGCCGGGGCGGGCACGGGCGCCGCCACCCGGATGGATCGGCGATTCTGGGTCCGGGCAGGGCTCTGGACCCGACGGCTCC
TGGAGGTACGGCTGGGAGTGGGCTTCAGGGCCTGGAGGCGGCTGGGGCTACGGCCACAGCTCAGAGCAGAGCCCAGGCGG
CGCCGCGTTTGGGTTCGGCTACGGCAGCGGCGGTGGTGGAGGAGGAGGAGGCGGAGGGGGGAGCGGACGTGGAGGCTTCG
GGTTCGGCAGGCTCGGCGGCCACGCCGGCGGGTTCGGCTGGGGTGTCGGGCCCGGCGGCCATGCTGGCGACTGGAGCGGC
GGCCATGCTGGCGGCTGGGGCAGCGGGAGCGGCGGCTGGGGAGCAGGCGGTGGGGCCTTTGGAGGCGGCCACGGCGGCTG
GGGCGCGCGCGCAGGGTTCCGCGGCGGGAGCCAACGGCCACCGCGCGGAGGACGCGGCGGCGGCAATTGACTTGGGGTCT
GTATGCTACGGCGTGGTGAGATCACTGCTGGAGTATAGTAGGAGCAGTTGATCTGGGTCCTCAGGTCTGGGAGGATGATG
TGGTTTGTTCAACTCTGTCTATCTGCATGTGTTAAAATTTCAGTGCGAGCCGTGATGATCGTAGCACGATCTGGATCCTG
GGTCTTGTAATGATACTGTGGATCACTTTGCATGTACAAGTGTTCAATTTCAGTATAACAGAAATGGTTATGTTTACATA
ATCAACATGTGCTGCTGGTGTGTGATGCTAGATCATGACTGAACATTCATGTAGCTTCATGGCAAAATCACAGCAAGAAA
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>chr2D_1_TraesCS2D01G389000
AACCAAACAAAGAAGGGC-GGGGTGAAGGTCATACAACGACCAA-GTGTCGTTTAATAGTAGAGATTGCGAAAAATCTAA
TGATAATACTACTCATGTATCGGTA-ACACTTTTAGTGGTCTGGAAAAATGATAGCAAAACCAAATCCATTTTAATAAAA
TAGGAGCGCGTTAGCTGGCGAACGTTCGTCAGGAAGAGTGGCAAATTTTAGTTTTTCTTTGCGAGGGAAA----------
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-------------------------------------------------------------------------ATCATGT
TCTTTCATTTAATCAACAGTGGGAGTACAATCATTTGAAATGACAATGCTAATCTCCTGGGGGAA-TTTGCTAACTAACA
AGCCGTACGCTATTGACCACG-CCCA-TCGCTGCTATAGCATGTGCGGCCTTATTCTGCGATCTACCTAT-TTTTATGA-
TTTGCATTGATCTTTCTTGCAACATCTTTGAGACGGACGCCACCTAAAACATATTCCTTGATCTTTCATTTGAACCTGAT
TCAAGGAGCTTCAAACATCTCCGCATAGTCTGCCTTCACCTGGATAGGCAGGGGAGTCCAGTGCAATGTCAGCTTCAGGC
CCTCCTCACAAGCCGATAGCTCCGCCTCCAATGCACCAAGGCAGTTCTGGATTCATCTGCATGCCGCGTAGATAACCGCA
TCCGTGTGATCACGTAGGATTATACCGACACCGA---------C---------TGTTCCATCTACCTGTACAAACGAACC
GTCAAAGTTGAGCTTTGCAACACTGCATGG-GAG--GCGTCCAACTGGGTTGAATGCTAGGCTCTAGTTTATGTTGAGCA
TCATTGTTGGATAATAGAATCGGCTGCTTCCCCCCGAGGACGTCCACCTCTGCCCCTGTTTGA-----T----AGCAAGG
AATCGACATATCTATAGAGAAATTTCTTCGACACCTCGACCGGGATCAGTGGCTTGTCATGGGTGAGTTCAAAATTTTAT
TTGAGGAATGATGATTTCTTATAGTTTCTTCATAGAAGACAAATTGAATTTAAAACCTGTCGCCGTTTGATCTGGCCTAA
CAACTAGTAAAACTGTGAGAAAAAAACTTTTGTTTGCCACCCTCTTCCCATCTGACGTCCGCCAAGTAATTTCTGATAAA
ATAATA---TAGATTGTGAAAAATTACCCTTATTATCGGTAGATTTTTATTGCGGTTCTGAAAAGTGGGGGCAAAATCGG
ATCTACAACGCGAATGTGGTTTTGCAACTCACACCC---ACAAGCGGCGTCAAGGTTCTACTCTTCTTCAGTGCGCAGCC
CTAAGTGTGACTCCATCTCTGCAATCTGCGCTGCGCGTGCGACGTCGAAGACATCGACATGGACGCGCCGAGGGGTACCC
CGCCGGGGCGGGCACGGGCGCCGCCACCCGGATGGATCGGCGATTCTGGGTCCGGGCAGGGCTCTGGACCCGACGGCTCC
TGGAGGTACGGCTGGGAGTGGGCTTCAGGGCCTGGAGGCGGCTGGGGCTACGGCCACAGCTCAGAGCAGAGCCCAGGCGG
CGCCGCGTTTGGGTTCGGCTACGGCAGCGGCGGTGGTGGAGGAGGAGGAGGCGGAGGGGGGAGCGGACGTGGAGGCTTCG
GGTTCGGCAGGCTCGGCGGCCACGCCGGCGGGTTCGGCTGGGGTGTCGGGCCCGGCGGCCATGCTGGCGACTGGAGCGGC
GGCCATGCTGGCGGCTGGGGCAGCGGGAGCGGCGGCTGGGGAGCAGGCGGTGGGGCCTTTGGAGGCGGCCACGGCGGCTG
GGGCGCGCGCGCAGGGTTCCGCGGCGGGAGCCAACGGCCACCGCGCGGAGGACGCGGCGGCGGCAATTGACTTGGGGTCT
GTATGCTACGGCGTGGTGAGATCACTGCTGGAGTATAGTAGGAGCAGTTGATCTGGGTCCTCAGGTCTGGGAGGATGATG
TGGTTTGTTCAACTCTGTCTATCTGCATGTGTTAAAATTTCAGTGCGAGCCGTGATGATCGTAGCACGATCTGGATCCTG
GGTCTTGTAATGATACTGTGGATCACTTTGCATGTACAAGTGTTCAATTTCAGTATAACAGAAATGGTTATGTTTACATA
ATCAACATGTGCTGCTGGTGTGTGATGCTAGATCATGACTGAACATTCATGTAGCTTCATGGCAAAATCACAGCAAGAAA
AACGGAG---CAAACGGGCTCATTCTTCTGTTTGAGGTCACATCTGTCGTGCCCAGGTTACAGGTTCAAGTTATACAAAG
AAATACGAAGAAAA--------------------------------AC--------------------------------
CCGAGATCCTACGCTCTTTGCTCATCAACCATAGAAGACAAACTTGCATACATTCTGTGCAGCTGGCAGTAGCTCAGCAC
TCTGTTGAGCCAAGCTCTGAGTCAACACCTGGATTTTTACATTGACAACGTCGGACTCAGAAACACAAATTATCAGAAGG
TGCATCCTATGCTGAACACGACTCCATGTTGCGCTGCTGCACGAAAATCTTCCATGAGATCATGATCTCAAGAGGCTGAG
TGACGAGGCT-------------TCTTCTAGCCTCCGACCGTTGCTCTACGTCTTTACTAC---ACCCTTCGTCCCTAAA
TGTAAGATGTTTTTGCAGTTCAATTTGAACTGCCGAAACGTCTTACATTTAGAAACATATAGGT----------------
-----------------------------------------AGTATTTAGGAAGTACAGTGACTTCACAGGGTCATATTT
GCTTCATTTTGCAATGATGGAACTTCACTTCCGAAACCATACTAGTGTCTCTGTGAGGCCTGGGGCATCCAGGATCCAAG
CTCAATGGCTTGCAGCTGTAGAGCCAAACATGGATAATCTGCAGGGTAAGAAATTAACGAAATTAGGACACCTGGAGCAG
AAGTATCCAACACAGCAGAACAAGTCATAAATGACATGACCCCTATTTTCCTCACCCACAAGCTTTGCCACCAGAAAGAT
CTTCAGATGGTGTTGC----------------------------------------------------------------
------TTTTCATTACGAGCATATTGGAACAGACTATGAAAGCTTTGGAATTCAAAGGTGTTGTTTATACACAAGCATTA
TATCCTGGACTTCACTGTCCATATGATAGAAACTGAAAGAAAGTACTAGGAAGGAATAGATTATAACTGGCT-TTGGGAC
ACCAACTTGGTTCTGATTTTGCACCTATGCAACGCAAATATATCGATCTGATCATCCAGCTGTAACTGCATTTTTCAACT
ATGAAAACCCA
>chr2B_1
AAACAAACAAATAAGGGCAGGGGTGAAGGTCATACAACGACCAAAGTGTCGTTTAATAGTAGAGATTGCGAAAAATCTAA
TGATAAAACTACTCATGTATCGGTAGACACTTTTAGTGATCTGAAAAAGCGATAGCAAAACCAAATACATTCTAATAAAA
TAGGACAGTGTTAGCTGGCGAACGTTCGTCATGAAGAGTGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCGTGT
TATTTCATTTAATTAATAGTGGGAGTACAATCATTTGAAATAACAATACTAATCTCCTGGGGGAA-TTTGTTAACTAACA
AACCGTACGATATTGACCACG-ACCCGTCACTGCTATAGCATGTGCGGCCTTATTCTGGGATCTACCTAT-TTTTGTGTG
TTTGCATTGATCTTTCTTGCCACATCTTTGAGACGGCTGCCACCTAAAACATATTCCTTGATCTTCCATTTAAACCTGAT
TCAAGGAGTTTCAA-CATCTCTGTATAGTCTGTCTTCACCTGGATAGGTACAGGAGTCCAGTGCAATGTCAGCTTCAGGC
CCTCCTAACAAGCCGATAGCTCCGCCTCCAATGCACCGAGGCAGTTCTGGATCCATCTGCATGTCGCGTAGATAACCGCA
TCTGTGTGATCACGTAGGATCATACCGGCACTGG---------CCGTTCCATCTG---------CCTGTATAAACAAACC
GTCAAAATTGAGCTTTGCAACACTACATGATGAG--GCGTCCAACTCGGTTGAATGCTACGCTCTAGTTTATGTTGAGCA
TCATTGTTGGATAATAGAATCGGTTGCTTCCCCCTGAGGACGTCCACCTATGCCCCTGTTTGA-----TGAGTAGCAAGG
AATCAATGTAGCTACAGAGAAATTTCTTCGACGCCTCGACCGGGATCAATGGCTTGTCATGGGTGAGTTCAAAATTTTAT
TTGAGAAATGACGA----------TTTCTTCCTAGAAGACAAATTACATATAAAACCTGTCGCCGTTTGATCTGGCCTAA
CAACTAAAACTGCCAG----AAAAACCTTTCGTTTGCCACCCTCTTCCAATCTGACGTCCGCCAAGTAATTTCCGATAAA
ATAATAGTATAGATTGTGAAAAATTGCCCTTATTATCGGTAGATTTTTAATGCTGTTCCGAAAAGTGGGGGCAAAATCGG
ATCTACAAAACAAATGTAGTTTTACAACTCACACCC---ACAACCGGCGTCAAGGTTCTACTCTTCTTCAGTGCGCAGCC
CTAAGTGTGATTCCATCTCTGCAATCTGCGCTGCGCGTGCGACGTCGAAGACATCGACATGGACGCACCGAGGGGTACCC
CGCCGGGGCGGCCACGGGCACCGCCGCCCGGATGGATCGGCGATTCTGGGTCCGGGCAGGGCTCCGGCCCCGACGGCTCC
TGGAGGTATGGCTGGGAGTGGGCTTCAGGGCCTGGAGGCGGCTGGGGCTACGGCCACAGCTCAGAGCAGAGCCCAGGCAG
CGCCGCGTTTGGGTTCGGCTACGGCAGCGGCAGTGGTGGTGGAGGAGGAGGCAGAGGGGGGAGCGGACGTGGAGGCTTCG
GGTTCGGCAGGTTCGGCGGCCACGCCGGCGGGTTCGGCTGGGGTGTCGGGCCCGGCGGCCATGCT---------------
------------------------------GGCGGCTGGGGAGCAGGCGGTGGGGCCTTTGGAGGCGACCACGGCGGCTG
GGGCGCGCGCGCAGGGTTCCGCGGCGGGAGCCAACGGCCACCGAGCGGAGGACGCGGCGGCGGCAATTGACTTGGGGTCT
GTATGCTACGGCGTGGTGAGATCACTGCTAGAGTATAGTAGGAGCAGTTGATCT--------AGGTCTGGGAGGATAATG
TGGTTTGTTCAACTCTATCTATCTGCGTGTGTTAAA-TTTCAGTGTGAGCAGTGATGATCGTAGCGCGATCTGGATCTTG
ACTCTT---GTAATATTGTGGCCATCCTTGTATGTTTGAGTGTTCCATTTCAGTATGTAAGAAATGGTTATGTGTACATA
ATCAACATGTGCTGCTGGTGTGCGATGCT---------------------------TCACGGCAAAATCCCATCAAGAAA
AACGGAACAACAAACTGGCTCATTCTTCTGTGTGAGGTCACATCGGTCGTGCC-AGGTTACAGGTTCAAGTTTTAAGAAG
AAATACAAAGAAAA--------------------------------AC--------------------------------
CTGAGATCCTACACTCTTTGCTGATCAACCATAGAAGACAAACTTGCATACATTCTGTGCAGCTAGTAGTAGCTCAGCAC
TCTGTTGAGCCAAGCTCTCAGCCAACACCTGGATTTTTACCTTGACAACGTCGGACTCAGAAACACAAATTATCATAAGT
TGCATCCTATGCTGAGCACAACT--------------TGCACGAAAATCTTCCATGATCTCAA-----------------
----GAGGCT-------------TCTTCTAGCCTCAGACCGTTGCTCTACGTCTTTAATACACGACCCTTCGTCCTTAAA
TGTAAGATGTTTTTGCAGTTCAATTTGAACTACCAAAACGTCTTACATTTAGAAACATATAGGTAGTACTCCCTCCATCC
CAAAATACTAGTCCTGGAAATGGATATTTCCGGACGGAGGGAGTATTTAGGAAGTACAGTGACTTCATAGGGTCATAGTT
GCTTTATTTTGCAATGATGGAACTTCACTTCCGACACCATACTAGTGTCTCTGTGAGGCCTGGAGCTTCCAGGATCCAAG
CTCAGTGGCTCCCAGCTGTAGAGCCAAGCATGGATAATCTGCAGGGTAAGAAATTAACGAAATTAGGACACCTGGAGCAG
AAGTATCCAACACAG-AGAACAAGTCATAAATGACATGACCCCTATTTTCCTCACCCACAAGCTTTGCCACCAGAAAGAT
CTTCAGATGGTGTTGCTTTTCATTACGAGCATATTGGAACAGACTATGAAAGCTTTGCCACCAGAAAGATCTTCAGATGG
TGTTGCTTTTCATTACGAGCATATTGGAACAGACTATGAAAGCTTTGGAATTCAAAGGTGTAC-----ACACAAGCATTA
TATCCTGGACT-CACTGTCCATATGATAGAA-CTGAAAGAAAGGACTAGGAAGGAATACATTTTAACTGGCT-TTGGGAC
ACCAACTTGGTTCTGCTTTTGCACCTATGCAATGCAAATATATCGATCTCATAATCCAGCTGTAACTGCATTTTTCAACT
ATGAAAACCCA
>chr3B_207
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-------------------------------------------------AGTTTTTTTTTGCGGGGGGAA----------
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-------------------------------------------------------------------------AGCATTT
CATTTCATTTAATCAATAGTGAGAGTACAATCATTTGAAATGACAATGCTAATCTCCTAGGGGGAATTTGCTAACCAACA
AGCCGTATGCTGCTGACCACGACCCA-TTGCTGCCATGGCATGTGCAGCCTTATTCTGTGATCTACCTAT-TTTTGTGA-
CTTGCATTGATCTTTCTTGCAACATCTCTGAGACGGCCGCCACCTGAAACATATTCCTTGATCTTCCCTTTGAACCTAAT
TCAAGGAGCTTCAA-GATCTCCGCACAGTCTGTCTCGACCTGGATAGGCAAGGGAGTCCAGTGCAACGCCAGCTTCATGC
CCTCCTCACACGCCGATAGCTCTGCCTCCAGTGCGCCCGGGCAGTTCCGGATCCATCTGCATGCCGCGTAGATAACCGCA
TCTGTGTGATCACGTAGGATCATACCGGCACTGG---------C---------TG---------CCTGTACAAACGAACC
GTCAAAATTGAGCTTTGCAACACCACATGG-GGGAGGAATCCAACTAGGTTGTACGCTAGGCTCCAGCTTATGTTGAGCA
CCATTGTTGGATAAAAGAGCTGGTTGCTTCCCCTTGAGGATGTCCACCTCTGGCCCCTGTTTGATAAGT----AGCAAGG
AATCAACATAGCTACAGAGAAATTTCTTTGATGCCTCGACCGGGATCAGTGGTTTGT-----------------------
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>chrUn_209
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---------------------------------------------------TTTTTTTTTGCGGGGGGAA----------
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-------------------------------------------------------------------------AGCATTT
CATTTCATTTAATCAATAGTGGGAGTACATTCATTTGAAATGACAATGCTAATCTCCTGGGGGAAATTTGCTAACCAACA
AGCCGTACGCTGCTGACCACGACCCA-TCGCTGCCATGGCATGTGCAGCCTTATTCTGTGATCTACCTAT-TTTTGTGA-
CTTGCATTGATCTTTCTTGCAACATCTCCGAGACGGCCGCCACCTGAAACATATTCCTTGATCTTCCCTTTGAACCTAAT
TCAAGGAGCTTCAA-TATCTCCGCACAATCTGTCTCGACCTGGATAGGCAAGGGAGTCCAGTGCAACGCCAGCTTCAGGC
CCTCCTCACACGCCGATAGCTCTGCCTCCAGTGCGCCCGAGCAGTTCCGGATCCATCTGCATGCCGCATAGATAACCGCA
CCTGTGTGATCACGTAGGATCATACCGGCACCAGCTGTTCCATC---------TG---------CCTGTACAAGCGAACC
GTCAAAATTGAGCTTTGCAACACCACATGG-GGGAGGAATCCAACTGGGTTGTACGCTAGGCTCCAACTTATGTTGAGCA
CCATTGTTGGATAAAAGAGCTGGTTGCTTCCCCTTGAGGATGTCCACCTCTGGCCCCTGTTTGATAAGT----AGCAAGG
AATCAACATAGCTACAGAGAAATTTCTTCGATGCCTCGACCGGGATTAGTGGTTTGTCATGGGTAAGTTC----------
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>chrUn_209
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---------------------------------------------------TTTTTTTTTGCGGGGGGAA----------
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-------------------------------------------------------------------------AGCATTT
CATTTCATTTAATCAATAGTGGGAGTACATTCATTTGAAATGACAATGCTAATCTCCTGGGGGAAATTTGCTAACCAACA
AGCCGTACGCTGCTGACCACGACCCA-TCGCTGCCATGGCATGTGCAGCCTTATTCTGTGATCTACCTAT-TTTTGTGA-
CTTGCATTGATCTTTCTTGCAACATCTCCGAGACGGCCGCCACCTGAAACATATTCCTTGATCTTCCCTTTGAACCTAAT
TCAAGGAGCTTCAA-TATCTCCGCACAATCTGTCTCGACCTGGATAGGCAAGGGAGTCCAGTGCAACGCCAGCTTCAGGC
CCTCCTCACACGCCGATAGCTCTGCCTCCAGTGCGCCCGAGCAGTTCCGGATCCATCTGCATGCCGCATAGATAACCGCA
CCTGTGTGATCACGTAGGATCATACCGGCACCAGCTGTTCCATC---------TG---------CCTGTACAAGCGAACC
GTCAAAATTGAGCTTTGCAACACCACATGG-GGGAGGAATCCAACTGGGTTGTACGCTAGGCTCCAACTTATGTTGAGCA
CCATTGTTGGATAAAAGAGCTGGTTGCTTCCCCTTGAGGATGTCCACCTCTGGCCCCTGTTTGATAAGT----AGCAAGG
AATCAACATAGCTACAGAGAAATTTCTTCGATGCCTCGACCGGGATTAGTGGTTTGTCATGGGTAAGTTC----------
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>chr1B_258
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-----------------------AGTACATTCATTTGAAATGACAATGCTAACCTCTTGGGGGGAATTTGCTAACCAACA
AGCCCTACGTTGTTGACCACGACCCA-TCACTGCCATAGCATGTGCAGCCTTATTCTGTGATCTACCTATTTTTTGTGA-
CTTGCATTGATCTTTCGTGCAACATCTCCGACACGGCCGCCACCTGAAACATATTCCTTGATCTTCCCTTTGAACCTAAT
TCAAGAAGCTTCAA-GATCTTCGCATAGTCTGTCTCCACCTGGATAGGCAAGGGAGTCTAGTGCAACGCCAACTTCAGGC
TCTCCTCACACGCCGATAGCTCTGTCTCCAATGCGCCCGGGCAGTTCCGGATCCATCTGCATGCTGCGTAGATAACCGCA
CATGTGTGATCACGAAGGATCATACCGGCATCGT---------CCGTTCCATCTA---------CCTGTACAAACGAACC
GTGAAAATTGAGCTTTGCAACACCGCATGG-GTGAGGAATCCAACCGGGTTGTACGCTAGGCTCCAGCTTATGTTGAGCA
CCACTGTTGGATAAAATAGCTGGTTGCCTCCCCTTGAGGATGTCCACCTCTGGCCCCTGTTTGATGAGT----AGCAAGG
AATCAACATAGCCACAGAGAAATTT-------------------------------------------------------
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>chr3A_361
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-------------------------------------------------CTTATTCTGGGATCTACCTA-TTTTTGTGA-
TTTGCATTGATCTTTCTTGCAACATCTTCGAGACGGCCGCCACCTAAAACATATTCCTTGATATTCCATTTGAACCTAAT
TCCAGGAGCTTCAA-TATTTCTGCACAATCTGTCTCCACCTGGATAGGCAAGGGAGTCCAGTGCAATGCCAGCTTCAGGC
CCTCCTCACACGCTGATAGCTCGGCCTCCAGTGCGCCCGGGCAGTTCTGGATCCATTTGCATGCCAGGTAGATAACCACA
CCCGTGTGATCACGCAGGATCATACCGGCGCTGA---------CTGTTCCATCTG---------CATGTACAAACGAACC
GTCAAAATTGAGCTTTGCAACACCGCCCGC-GAGAGGCATCCAACTGGGTTGTACTCTAGACTCCAGCTTATGTTGAGCA
CCATTGTTGGATAAAAGAGCCGGTTGCTTCCCCTTGAGGACGTCCACCTCCGACCCTTGTTTGATGAGT----AGCAAGG
AATCGATATAGCTACAGAGAAATTTCTTCGATGCCTCGACTGGGATCAGTGGCTTGTCATAGTTAAGTTC----------
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>chr3D_361
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-------------------------------------------------CTTATTCTAGGATCTACCTA-TTTTTGTGA-
TTTGCATTGATCTTTCTTGCAACATCTTCGAGACGGCCGCCACCTGAAACATATTCCTTGATATTCCATTTGAACCTAAT
TCCAGGAGCTTCAA-TATTTCTGCACAGTATGTCTCCACCTAGATAGGCAAGGGAGTCCGGTGCAATGCCAACTTCAGGC
CCTCCTCACACGCTGATAGCTCGGCCTCCAGTGCGTCCGGGCA-------------TTGCATGCCAGGTAGATAACCACA
CCTGTGTGATCACGTAGGATCATACCGGCGCCAGCCGTTCCATC---------TG---------CCTGTAT----GAACC
GTCAAAATTGAGCTTTGCAACACCGCACGG-GAGAGGCATCCAACTGGGTTGTACTCTAGACTCCAGCTTATGTTGAGCA
CAATTGTTGGATAAAAGAGCCGGTTGCTTCCCCTTGAGGACGTCCACCTCTGACCCCTGTTTGATGAGT----AGCAAGG
AATCGACATAGCTACAGAGAAATTTCTTCGACGCCTTGACAGGGATCAGTGGCTTGTCATAGTTAAGTTC----------
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>chr2A_1111
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----------------------------------ATCGGTAGATTTTTATAGCGGTTCTGAAAAGTGGGGGCAAAATCGG
GTCTACAACGCGAATGTGGTTTTGCAATTCACATGGTCAACAAGCGGCGTCAAGGTTCTGTAC-TCTTCAGTGCGCAGCC
CTA-GTGTGATTCCATCTCTGCAATCTGCGCGGCGCAAGCGACGTCGAAGACATCGACATGGACGCACCGAGGGGTACCC
CGCCGGGGCGGGCACGGGCACCGCCACCCGGATGGATCGGCGATTCTGGGTCCGGGCAGGGCTCCGGACCCGACGGCTCC
TGGAGGTACGGCTGGGAGTGGGCTTCAGGGCCTGGAGGCGGCTGGGGTTACGGCCACAGCTCAGAGCAGAGCCCCGGCGG
CACCGCGTTTGGGTTCGGCTACGGCAGCGGCGGTGGC---GGAGGAGGAGGCGGAGGGGGGAGCGGACGTGGAGGCTTCG
GCTTCGGCAGGCTCGGCGGCCACTCTGGCGGGTTCGGCTGGGGTGTCGGGCCCGGCGGCCATGCTG--------------
----------GCGGCTGGGGCAGCGGGAGCGGCGGCTGGGGAGCAGGCGGTGGGGCCTTTGGAGGCGACCACGGCGGCTG
GGACGCGCGCGCAGGGTTCCGCGGCGGGAGCCAACGGCCACCTCCCGGAGGACGCGGCGGCGGCAATTGACTTGGGGTCT
GTATGCTGCGGCGTGGTGAGATCACTGCCAGAGTATAGCAGGAGCAGTTGATCT--------AGGTCTGGGAAGATAACG
TGGTTTATTCGACTCTGTCTATCTGCGTGTGTTAAA-TTTCAGTGTGAGCAGTGATGATCGTAGAACGATCTGGATCTTG
ACTCTT---GTAATATTGTGGCCATCCTTGTATGTTTGAGTGTTCCATTTCAGTATGTAAGAAATGGTTATGTGTACATA
ATCAACATGTGCTGCTGGTGTGTGATGCTAGATCATGACTGAACATTCATGCAGCTTCATGGCAAAATCCCAGAAAGAAA
AACGGAACAA---ACGGGCTCATTCTTCT-------------------------AGGTTACGGGTTCAAGTTTTACAAAG
AAATGCCAGGAGAAACAACTACAGAAAGCCAAGAGTTTCCCCTGGTAC--------------------------------
CAGAGATCCTACGCTCTTTGCGGATCAACCATAGAAGACAAACTTGCATACATTCTGTGCAACTAGTAGTAGCTCAGCAC
TCTGTTGAGCCAAGCTCTCAATCAACACCCGGATTTTTACCTTGACAACGTCGGACTCAGAAACACAAATTATCAGAAGT
TGCGTCCTATGCTGAACACGACTCCATGTTGCGCTGCTGCACGAAAATCTTCCATGATCTCAA-----------------
----GAGGCTGAATGATGAGGCTTCTTCTAGCCTTCGACCGTTGCTCTACATCTTTACTAC---ACCCTTCGTCCCTAAA
CGTAGGATGTTTTTGCAGCTCAATTTGAACTGCCAAAACATCTTACATTTAGAACCAT----------------------
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>chr2A_1653
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-------------------GCAGCGGGAGCGGCGGCTGGGGAGCAGGCGGTGGGGCCTTTGGAGGCGACCACGGTGGCTG
GGGCGCGCGCGCAGGGTTCCGCGGCGGGAGCCAACGGCCACCGCGCGGAGGACGCGGCGGCGGCAATTGACTTGGG-TCT
GTATGCTGCGGCGTGGTGAGATCACTGCCAGAGTATAGTAGGAGCAGTTGATCT--------AGGTCTGGGAGTATAATG
TGGTTTGTTCGACTCCGTCTATCTGCGTGTGTTAAA-TTTCAGTGTGAGCAGTGATGATCGTAGCACGATCTGGATCTTA
C-TCTTGTAGTAATATTGTGGCCATCCTTGTATGTTTGAGTGCTCCATTTCAGTATGTAAGAAATGGCTAA---------
---AACATGTGCTGCTGGTGTGTGATGCTAGATCATAACTCAACATTCATGTAGCTTCATGGCAAAATCCCAGCAAGAAA
ATCGGAACAA---ACGGGCTCATTCTTCTGTTTGAGGTAGCATCGGTCGTGCCCCGGTTACAGGTTCAAGTTTTACAAAG
AAATGCCAAGGGAA--------------------------------ACAACTACCGAAAGCCAAGAGTTTCACATGGTAT
CCGAGATCCTACGCTCTTTGCGGATCAACCATAGAAGACAAACTTGCATACATTCTGTGCAACTAGTAGTAGCTCAGCAC
TCTGTTGAGCCAAGCTCTCAATCAACACCCGGATTTTTACCTTGACAACGTCGGACTCAGAAACACAAATTATCAGAAGT
TGCGTCCTATGCTGAACACGACTCCATGTTGCGCTGCTGCACGAAAATCTTCCATGATCTCAA-----------------
----GATGCTGAATGATGAGGCTTCTTCTAGCCTTCGACCGTTGCTCTACATCTTTACTAC---ACCCTTTGTCCCTAAA
CGTAAGATGTTTTTGCAGCTCAATTTGAACTGCCAAAACATCTTACATTTAGAAACATATAGGT----------------
-----------------------------------------AGTATTTAGGAAGTACAATTACTTCACAGGGTCATAGTT
GCTTCATTTTGCAATGATGGAACTTCACTTCCAAAACCATACTAGTATCTCTGTGAGGCCTGGAGCATCCAGGATCCAAG
CTCAATGGCTCGCAGCTGTAGAGCCAAACATGGATAATCTGCAGGGTAAGAAATTAACGAAATTAGGACACCTGGAGCAG
AAGTATCCAACACAGCAGAACAAGTCATAAATGACATGACCCCTATTTTCCTCACCCACAAGCTTTGCCCCCAGAAAGAT
CTTCAGATGGTGTTGCTTTTCATTACGAGC--------------------------------------------------
--------------------ATATTGGAACAGACTATGAAAGCTTTGGAATTCAAAAGTGTTGTTTATACACAAGCATTA
TATCCTGGACTTCACTGTCCATATGATAGAAACTGAAAGAAAGGACTAGGAAGGAATACATTTTAACTGGCTTTTGGGAC
ACCAACTTGGTTCTGCTTTTGCACCTATGCAATGCAAATATATCGATCTGATAATCCAGCTGTAACTGCATTTTTCAACT
ATGAAAACC--
>SNPs
--S--------S--------------------------------------------------------------------
------S-------------------------------S----S----SS----------------S----S--------
-----SS-S----------------------S----------SSSSSSS-------S------S---S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S--------------S---------------------------------------------------------------
----------------------------------------------------------S----------------S----
------------------------------------S----------------------------S--------------
--------------S-----------------S-----------------S-----------------------------
-------------------------------------S--------------S---------------------------
--------------------S------S---------------------------SSSSSSSSS----------------
------S-------------------------------------------------------------------------
-----------------------S----------S---------------------------------------------
----------S---S-----------------S-----------------------------------------------
-----S-----S--SSSSSSSSSS-------S-------------SS--S------------------------------
------SS-SSS-SSSSSSS-----S----S-----------------S------------------------S------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
----------S-------------------------------------------------------S-------------
-------------------S--------------------------------------------S---------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
------------------------------------------------------------------SSSSSSSSSSSSSS
SSSSSSSSSS---------------------------------------------------------S------------
--------------------------------------------------------------------------------
-----------------------------S------------------------SSSSSSSS--------------S---
--------------------------S---------S--------S----S--------------------------S--
SS-------S-S---S-----SSSS-S---S----SSS-------S----------SSS--------------S------
---------------------------------------------------------------------S----------
------S-------------------------------------S---------------------------S-------
------S-------------------------------------------------------------------------
----------------------S-----------------------------------------S-S-------------
------------------S---------------------S--------------------------------------S
---------------------------------------------------------SS---SSSSSSSSSSSSSSSSSS
SSSS----------------------------------------------------------------------------
----------------------------------S---------------------------------------------
-----------------------------------------------------------------------------S--
---------------------------------------------------------------S----------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S--------------S---S-----------------
---------------S----------------S-------------------S---------------------------
-----------
>forward_539
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CATGTGCGGCCTTATTCTGC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>reverse_2117
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------ATTTCAGTGCGAGCCGTGAT------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>forward_2060
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------GGAGCAGTTGATCTGGGTCC--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
>reverse_3051
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TGCAGCTGTAGAGCCAAACA--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------
