>input_sequence_60263
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-----------------------------------------------------------ATGGGAGAAGAGTGCAAGGGC
GCGGGGGCGGACGTGAACGCCGGCGTCGACCCGGCGGCGATCGAGAAGCTGTACGAGGACGTGCCGCCGATGCCGCTGAT
GGCGCTGAACCACATCTCGCGCCTCTGCAAGTCCGTCGACGCCTCCGTCCGGTTCTACGTCAAGGCGCTCGGCTTCGTCC
TCATCCACCGCCCTCCCGCGCTCGACTTCTCCGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCGTTCATCTCCGGCGCCTGG-------TACGTGCACCATGACGTGTTAACTGCTAAGAAAATACGT
ACGTAAG-------------------------------------------------------------------------
------AGAAAATGGCTTCTTGCATGGCATGGCGCCGTGATGTTTGAAACTTTGTGCGTCACGTAAACGTTGGTGTTTGA
---TCAGGCTGTTCAACTACGGCATCGGGATCCATCTCGTCCAGAGAGACGACGCGCGACGGGCCGCCGACGTCAACCCC
GGTGAGCTCGACCCCATGGACAACCACATATCGTTCCAGGTAATTATACTATGTATGTTTGCTAAGGTTCAGA------G
TCACGTCAGTTGCGCAGCATGCGGTGAATAGTAATTAAGCTTTTGGATCGTCTTGGTGTGCAGTGCGAGGACATGGGCGC
GATGGAGAGGAGGCTGAAAGAGATGGGGATCAGGTACATGAAGAGGACTATCAACGAGGAGGAGGGTTCGCCGATCGACC
AGCTCTTCTTCAAGGACCCCGATGGCTTCATGATCGAGATCTGCAACTGCGAGAACCTCGAGCTCGTCCCCGCCGGCGCG
CTCGGCCGCCTCAGGCTGCCGCGCGACCGCCACAACCCGCCGCTCCGGATGGACGGCGCCGACGAGTAG-----------
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>chr2A_1_TraesCS2A01G133100
TGCCAGGGTGCGGTTTGGAAGAAGAGGAACAGCAGCGGCAGTGTGTCGGGACAGAGACGGTAACTACTTGGGTAGTTCAG
CTCTAGTTATCAACGGTGTTTCTGATCCATCGACTCTTGAAGTCATCGCATGCAGAGAGGCGCTTGCCTTAGCAGCAGAC
TTACAGGTACAAGTAGAACAGCTTGTTATCTCATCAGATTCGAAATGAGCTGTTGGTGACATCAACAAGGGAGCTAGAGG
AGACTACGGAGCCATTATCAAAAAGATAAAACTTAATACGTCCTTACTTGTACTTTTATCTATGAACATCGTGAAGCACA
TAGTTTACCCAAATTCTCTCATAGAACGCCACGTGTGATATAGTCAACCCATGATTTAAATTGTATCCCACATTCTGTGG
TTTTTGATGAATAAACTTTGATTAAACCTTAGAAAAAATCCAGTCTATCTTTAGCTCAAAAAATAAATCCGGTTTATCCA
GCCGCCCTCTCAGACGCTTGGTTGTCAGGATGCAAGCGGGCATCCCGCATAAGCCCGCAAAATCGACAGATCTGAAGTTC
TGAACCGGAAAATTATAACAGACATGATATACTTTCACTTGGAAGCGGGTCGGATCGGGCGCCGCTCTGCACCCCATGTC
ACTGCCTCACCGCTCAGATGGTCCAAGGACTTCGTACTCCATCACCGGGCAGGGGCATCATG--------GCATGGTCCC
GGCCTGCCGCACGGTGCCGACCTGACGCAACAAACGAGTCCCGAGGCCACCGTGGCAACCCTCGCCGTCGACACATCTGC
CTGAGCCGCACTCGTGCCGAGCAGCCCGTGCGCGCACGCAAAACCACACGGAGCTACGTGTTGCCGCCTCAACACGACGC
GTATGGCTGGCGCCATGCATGACCCGAAGCTCGGTGCT-------CGGGTTAAAACGCCGCGCGCACACCCTCCACCTCC
ATCGCTCGCTCGC----TCGCTCGCTTCTAGGACGTCGTCAAGAAACTCGCGGGGCAAGATGGGAGAAGAGTGCAAGGGC
GCGGGGGCGGACGTGAACGCCGGCGTCGACCCGGCGGCGATCGAGAAGCTGTACGAGGACGTGCCGCCGATGCCGCTGAT
GGCGCTGAACCACATCTCGCGCCTCTGCAAGTCCGTCGACGCCTCCGTCCGGTTCTACGTCAAGGCGCTCGGCTTCGTCC
TCATCCACCGCCCTCCCGCGCTCGACTTCTCCGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCGTTCATCTCCGGCGCCTGG-------TACGTGCACCATGACGTGTTAACTGCTAAGAAAATACGT
ACGTAAG-------------------------------------------------------------------------
------AGAAAATGGCTTCTTGCATGGCATGGCGCCGTGATGTTTGAAACTTTGTGCGTCACGTAAACGTTGGTGTTTGA
---TCAGGCTGTTCAACTACGGCATCGGGATCCATCTCGTCCAGAGAGACGACGCGCGACGGGCCGCCGACGTCAACCCC
GGTGAGCTCGACCCCATGGACAACCACATATCGTTCCAGGTAATTATACTATGTATGTTTGCTAAGGTTCAGA------G
TCACGTCAGTTGCGCAGCATGCGGTGAATAGTAATTAAGCTTTTGGATCGTCTTGGTGTGCAGTGCGAGGACATGGGCGC
GATGGAGAGGAGGCTGAAAGAGATGGGGATCAGGTACATGAAGAGGACTATCAACGAGGAGGAGGGTTCGCCGATCGACC
AGCTCTTCTTCAAGGACCCCGATGGCTTCATGATCGAGATCTGCAACTGCGAGAACCTCGAGCTCGTCCCCGCCGGCGCG
CTCGGCCGCCTCAGGCTGCCGCGCGACCGCCACAACCCGCCGCTCCGGATGGACGGCGCCGACGAGTAGCACCAAGCCAG
ACGTAGCACGGGGCTTGCGCGCGCGTGCGTAGCTAAGCAAGTTAGCTAGTGGAAGTGGTGTAACGAACTGCTGTTGCGTT
TAAATTTTGGCTAGTG------CCAAGTTTCTCTTTACTC-TATGTTGCGCCGTGTGTGCTTCCCAATCAGCTGGTAGCT
GCACCCTGATTTTTTGCTGGCCAGTGTTTGGTTCCGCTTAGCACAAAAAACATATCATGCTTTTCCGTGAAAAAAATAAA
AAAATAAAAATATTATGCTACGAGAGCTTTCACAGTGCTCCAGGAAAAAATTCTGCTCTCTGGTTATTTTACTTTAGGAT
CACGAAGAAATTACTTGCTCTATGGTTTGCGTTCACCCACTAAAATCTCAGACAAATCTTTGCATTTACAATGACTAAAT
TGACCATCTTGTGACATGACATATCATTTTCTTTTTATGTTTTGAAATCGTGCCAATAAGATCTATCCAACATGTGTTTT
GGGGTTAGAGATAGAATGCATGACAGAAATTATTTCATCTTGATGTAGTACACAATCTGAGATGAACGATTTACTTGCTC
TGCGGCATATCAAAAACCAAAATATCAAAATAGACACTAAGGTGAAAAGAACAATCAAGACACTAAGATTGCTGCCAAAA
TAATTACAAAGAAAATCATAGATGTAACAATAACCTTGCAATCCCCACATCTTGGCATGAAGATCATTAGATATTCAGAA
CAAAATTCTAGCCAAAGCCGCATACGAAAAGTATGGTATGCAAAAAAATTGTTAGGGTATGACCAATTGTAACCTTCATG
AGCAAACCAAGATGTGGAGGAACTTAAGAAAACAAATAAAAATGTAAATACAAAAAGACCAAAGCAGGAGAAGAGCATAA
TTAAATAAATTGTTGTAGCATCACAGAAATTTCCCGGCATGGATAAGAATAGTCGGAATGTATGGACCCAATTTATCAAA
GGCATGTCATAGGAATTAGCCTAAGACTATTCATAA
>chr2B_637
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----------------------------------------------------------------------------TGTC
ACTGCCTCACCGCTCACATGGTCCAGGGACTTCGGACTGCATCACCCCAGTGGGGCATCATGGCATATTGGCATGGTCCC
GGCCTGCCGCACGGTGCCGACCTGACGCAACAAACGAGTCCCGAGGCCACCGTGGCAAGCCTCGTCGTAGACACATCCAC
CTGAGCGGCACTCGTGCCGAGCAGCCCGTGCGCGCACGCAAAACCATACGGAGCTACGTGCTGCCGCCTCAACACGACGC
GTATGGCTGGCGCCATGCATGACCCGAAG-------CT-------CGGGTTAAAACGCCGCGCGCACACCCTCCGCCTCC
ATC--------GC----TCGCTCGCTTCTAGCACAGCGTCCAGAAACTCGCGGGACAGGATGGGAGAGGAGTGCAAGGGC
GCGGGGGCGGATGTGAACGCCGGCGTCGACCCGGCGGAAATCGAGAAGCTGTACGAGGACGTGCCGCCGATGCCGCTGAT
GGCGCTGAACCACATCTCCCGCCTCTGCAAGTCCGTCGACGCCTCCGTCCAGTTCTACGTCAAGGCGCTCGGCTTCGTCC
TCATCCACCGCCCTCCCGCGCTCGACTTCTCCGGCG--------------------------------------------
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-----------------------------CCTGG-------TACGTGCACCTTGACGTGATAACTGTTGAGAAAATACGT
ACTCGTTCCAAAATAGATGACTCAAATTTGTACTAACTTTAATATAAAGTTGGGTCATCTATTTTGAAACGGAGAGAGTA
CGTGACAGAAAATGGCTTCTTGCATGGCATGGCGCCGTGATCTTTGAAACTTTGTGCGTCACGTGAACGTTCGTGTTTGA
---TCAGGCTGTTCAACTACGGCATCGGGATCCATCTCGTCCAGAGAGACGACGCGCGACGGGCCGCCGACGTCAATCCC
GGCAAGCTCGACCCCATGGACAACCACATCTCGTTCCAGGTAATTTTTCTA--TATATCAGCCAAGGTTCAGCGAGTGGG
TCACGTCAGTAGCGTACCATGCCATGAATCAG---TAAGC-TTTGGATC------GTGTGCAGTGCGAGGACATGGGCGC
GATGGAGAAGAGGCTGAAGGAGATGGGGATCAGGTACATGAAGAGGACCATCAACGAGGAGGAGGGTTCGCCGATCGACC
AGCTCTTCTTCAAGGACCCCGACGGCTTCATGATCGAGATCTGCAACTGCGAGAACCTCGAGCTCGTCCCCGCCGGCGCG
CTCGGCCGCCTCAGGCTCCCCCGCGACCGCCACAACCCGCCTCTCCGGATGGACGGCGCCGACGAGTAGCACCAAGCCAG
ACGTAGCAAGGGGCCTGCGCGCGCGTGCGTAGCTAAGTAAGTTAGCTAGTGG------TGTAACGAACTGCTGTTACGTT
TTAATTCTGGGCAGTACTC---CCAGGTTCCTCTTTACTAGTATGTTGCGTCGTGTGTGTTTCCCAATCAGCTGGTAGCT
GCACCCTGATTTTTTGCTGGCCAGTGCTCGGTCCCGCTT-----------------------------------------
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>chr2D_639
TCACCGCTCACAGC------------------------------------------------------------------
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------------CTCACATGGTCCAAGGACTTCGGAGTCCATCACCCCAGTGGGGCATCATG--------GCATGGTCCC
GGCCTGTCGCACGGTGCCGACCTGACGAAACAAACGAGTCCCGAGGCCACCGTGGCAAGCCACTCCGTCGACACATCCAC
CTGAGCCGCACTCGTGCCGAGCAGCCCGTGCGCGCACGCAAAACCATACGGAGCTACGTGCTGCCGCCTCGACACGACGC
GTATGGCTGGCGCCATGCATGACCCGAAG-------CTCGGTGCTCGGGTTAAAACGCCGCGCGCACACCCTCCGCCTCC
ATC--------GCTCGCTCGCTCGCTTCTAGGACGGCGTCAAGAAGCTCGCGGGGCAGGATGGGGGAGGAGTGCAAGGGC
GCGGGGGCGGACGTGAACGCCGGCGTCGACCCGGCGGTGATCGAGAAGCTGTACGAGGACGTGCCGCCGATGCCGCTGAT
GGCGCTGAACCACATCTCCCGCCTCTGCAAGTCCGTCGACGCCTCCGTCCGGTTCTACGTCAAGGCTCTCGGCTTCGTCC
TCATCCACCGCCCTCCCGCGCTCGACTTCTCCGGCG--------------------------------------------
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-----------------------------CCTGGTACGTACTACGTGCACCTTGACGTGTTAG-----------------
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-------GAAAATGGCTTCTTGCATGGCGCCGTA-CGTGATCTTTGAAACTTTGTGCGCGACGTCAATAACCTACGTGCT
TGGTCAGGCTGTTCAACTACGGCATCGGGATCCATCTCGTCCAGAGAGACGACGCGCGACGGGCCGCCGACGTCAACCCC
GGCGAGCTGGACCCCATGGACAATCACATCTCGTTCCAGGTAATTATACTA--CGTGTTTGCTAAGGTTCAGA------G
TCACGTCAGTTGCGCAGCATGCGGTGAGTAGTAACTAAGC-TTTGGATCGTCTTGGTGTGCAGTGTGAGGACATGGGCGC
GATGGAGAGGAGGCTGAAGGAGATGGGGATCAGGTACATGAAGAGGACCATCAACGAGGAGGAGGGTTCGCCGATCGACC
AGCTCTTCTTCAAGGACCCAGACGGCTTCATGATCGAGATCTGCAACTGCGAGAACCTCGAGCTTGTCCCCGCCGGCGCG
CTCGGTCGCCTCAGGCTGCCCCGCGACCGCCACAACCCGCCTCTCCGGATGGACGGCGCCGACGAGTAGCACCAAGCCAA
ACGTAGCACGGGGCCTGCGCGCGCGTGCGTAGCTAAGCAAGTTAGCTAGTGG------TGTAACGCACTGCCGTTACGTT
TTAATTCTGGGTAGTACTACTACCAAGTTTCTCTTTAC---TATGTTGCGTCGTGTGTGTTTCCCAATCAGCTGGTAGCT
GCACCCTGATTTTTTGCTGGCCAGTGCTCGGTTCCCGCTTCGCACAA---------------------------------
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>SNPs
-SS-S-SSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
----------------S-----------------S-----------SSSSS-----------------------------
----------------------------------------------------------S------------------SS-
----------------------------------------------S-------------S-------------------
-----------------------------SSSSSSS--------------------------------------S-----
---SSSSSSSS------------------------S---------------------S---------S------------
-------------------------------------S------------------------------------------
------------------S-------------------------------------------------------------
------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------S--------------S-S-----------
--SSSSS-------------------------------------------------------------------------
-----------------------------------------S----------------------S------S--------
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--S--------------------------S---------------------SS---------------------------
----------------------------------S-----S---------------------------------------
------------------S-----------------------------S-------------------------------
----------------------S---------------------------------------------------------
--------------------S--------------------S--------------------------------------
--------------S-------------------------------------SSSSSS-----------------S----
-S----S---S----S-----------------------S----------S--------S--------------------
--------------------------S-S----------SSSSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_552
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----------------------------------------------------GCCCGCAAAATCGACAGATC--------
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>reverse_2583
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----------------------TGGTTTGCGTTCACCCACTA--------------------------------------
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