>input_sequence_60239
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--------ATGCCCGACAAGTCAACCCTATCAGCTAACTCCTC------------------GGCGGGGGCGGGGCACAAC
AACAACAAGAAGAAGAAGCCGATG------------------TATATTCGGCCGCCGGCACCGATGGTGAACATGAAACC
ATCGATATGCGCCAAGACTTGGTACGATCGATGGGGCGAGATGAATTGCTTCCCTCTCACTGAAACCAAGCTCTTCTTCA
CCGACAGCTCCGCGCGCATCTTCCGCTTCGATGCCGACACCCACTGCATCGACACCATGCCCAGCCTCCACACGCCCAAG
TCCTCCCCCTTGTCCTTCTCCATCCCTCCAAATCCGACCACCTCCAAGGAAGGCCAAGGCGAAGGCGGAGGCCTC-----
TACATCATGGACAGGATCCTCAGGCCCAACAAGGAGGGTCAGGTCCAGTTTGAGTCTATCTCGTACCGCAGGCGCTGCAA
CCA---CTCCAGCAAGGCCTGGCACTGCGACGCCCTCCCGCCGCCGCCTTTCGTCCACGACCCGGCCT------ACAAAC
AAGCCTCCATCTGCTCCTATGCCCTGGTTGGCGGCCACACCATCTGTATCTCCATCAGGGGCGTCGGCACCTA---CTTT
GACACGCTGGCTTGCGAGTGGAGCAAGGCTGGCAACTGGCTCATGCCGTTTCATGGCAGGGCGGAGTATGACCCGGAGCT
CGGCCTCTGGCTTGGCGTCTCTGAGCGCAACATCCACCTCCCCTGCGTCGCCGACATCTCCGGTGTCCTCAGAGGGGAGG
AGCCGCTGCGGGAGCACACTCGAATCTGGGAGGATACTGACATGCCAGAGGGGTGGTACCCGCACAGTCAG------TGC
CCCACCCAAGTTGTCAGCCTGGGTTCAGGCAGGTTTTGCGTCACCAACTTCGTTGAAACTAAGGACTTCGATGAGCGCTG
CGGCCATTCGTTGGTTGACGACATATTTGCTGTCTTCACCGGCATGGAGCTAGTGTTACCCGGC------------AAT-
-----------GACAATGATGAGGGCAAAGCCAACAGCAACAGCAAG---------------------GGCGACTCCAAA
GGCAATGCCAATGGGAACGGCAACGGGATTGCTGGTGTGCGTATGATTAAGCATAAATCCAGATCTTGCAGGAGTCACGG
CACCAACTTGATCAAGTCTGTGCTCTGA----------------------------------------------------
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>chr3A_1_TraesCS3A01G320000
AGGAAAGTCAATTTGGATAAACATGATTTTCTTAAAAAAA--TCATGAACAAGCAAATTAACATTAGTCTATTCAAAAAA
AGTTCACGAATTAG-AAAACGTTCACATATTCACAAAGTTCATTAATAT-GA-AAAAA---TGACTAA------------
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--------------------------------------------------------------------TTTGAGAACATT
CATCGTTTCAAAAAAC-AGTTCATCAAATTTGGGAAAAATCAT--------------------CAAATTTGAGAAAAGTT
CATCGAATTTT-AAAAAGTTCATCGACTTTG-------------------AAAAAAAGTTCATCGATTCTGAAAAA-GTT
CAAAGAATTTCAAAAAAGTTCATCGAG-TTTGAAAAAAACATTTATCGACTTTGAGAAAAGTTCATC-------------
-------GATTCTGAAAAAAGTTCATTGAATTTTCAAAAAAGTTCATCAA-------------------AATTTGAAAAA
ATGTTCATCAACTTTGAAAAGAGTTCATCGAAA---AGAAAAGTTCATAAAATTTG---AAAAAAAA-G-----TTTGTC
AATTTTGAAAA--------------------AAGTTCACCGAATTTGAGAAAAGTTCATCGAA---TGAAAAAAGAAATT
CATC-------------------AAGTTTGAAAAG---------------------------------------------
-------------AAGTTCATCAATTTTGAT-AAAAGTTCATGGAATTTGA-AAAAAAAAGTTCACGCATTTGAAAAAAC
ATTCGCGGTATTTAAGTAAATAAAATGAAAAGGGAACAAGAAAAAAATAGAAAAAAACAGCCCAGAAATGAGCGAACCAG
TGAGATCGCGACCTAAAAAAAATAAAAGAAAAGAAAGAAATGTTAGACACAAGTTCTTCGTTGTCCTGGTGGTCAGTGTG
CTGCATCCTTAAACAAGGGATCCTATAGGAAGGAAAGAGGATCTTTTTTTTTAAAAGATCCTCTTTCCTTCCTGCGGTTG
GATTGATCGGAGATGAGCGCCCGACGGTTTTTGAACATCCTGGTGTCGGATTGCCAGAAATTCACGTACACGCTGCGGCG
CTTCGACCTGTCCCGCAACCAGTT-TTCTACCCAACACCAGAAGAAGCAGCGGAACATGCCAAAGTGGTGCCTCCATTGA
CA---GGCATGCCCGACAAGTCAACCCTATCAGCTAACTCCTC------------------GGCGGGGGCGGGGCACAAC
AACAACAAGAAGAAGAAGCCGATG------------------TATATTCGGCCGCCGGCACCGATGGTGAACATGAAACC
ATCGATATGCGCCAAGACTTGGTACGATCGATGGGGCGAGATGAATTGCTTCCCTCTCACTGAAACCAAGCTCTTCTTCA
CCGACAGCTCCGCGCGCATCTTCCGCTTCGATGCCGACACCCACTGCATCGACACCATGCCCAGCCTCCACACGCCCAAG
TCCTCCCCCTTGTCCTTCTCCATCCCTCCAAATCCGACCACCTCCAAGGAAGGCCAAGGCGAAGGCGGAGGCCTC-----
TACATCATGGACAGGATCCTCAGGCCCAACAAGGAGGGTCAGGTCCAGTTTGAGTCTATCTCGTACCGCAGGCGCTGCAA
CCA---CTCCAGCAAGGCCTGGCACTGCGACGCCCTCCCGCCGCCGCCTTTCGTCCACGACCCGGCCT------ACAAAC
AAGCCTCCATCTGCTCCTATGCCCTGGTTGGCGGCCACACCATCTGTATCTCCATCAGGGGCGTCGGCACCTA---CTTT
GACACGCTGGCTTGCGAGTGGAGCAAGGCTGGCAACTGGCTCATGCCGTTTCATGGCAGGGCGGAGTATGACCCGGAGCT
CGGCCTCTGGCTTGGCGTCTCTGAGCGCAACATCCACCTCCCCTGCGTCGCCGACATCTCCGGTGTCCTCAGAGGGGAGG
AGCCGCTGCGGGAGCACACTCGAATCTGGGAGGATACTGACATGCCAGAGGGGTGGTACCCGCACAGTCAG------TGC
CCCACCCAAGTTGTCAGCCTGGGTTCAGGCAGGTTTTGCGTCACCAACTTCGTTGAAACTAAGGACTTCGATGAGCGCTG
CGGCCATTCGTTGGTTGACGACATATTTGCTGTCTTCACCGGCATGGAGCTAGTGTTACCCGGC------------AAT-
-----------GACAATGATGAGGGCAAAGCCAACAGCAACAGCAAG---------------------GGCGACTCCAAA
GGCAATGCCAATGGGAACGGCAACGGGATTGCTGGTGTGCGTATGATTAAGCATAAATCCAGATCTTGCAGGAGTCACGG
CACCAACTTGATCAAGTCTGTGCTCTGATGAGGA--ATAATAGTCTGCTGTCAGGCCATGTCCTACTTGGTCTGCCTGCT
TTACCCT------------------ATATGTATTGTAATAAGATACCGT-------------------------------
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--------------------------ATGCTGGATGGCGCCTCATTCACGTCATCATTCGTGCTATGAACACTCGCACTA
GGTTCTGAAACCAACAAAGAGGTT--------------------------------------------------------
--------------------------ATTTCATGCCACCACATTCTAATGATTTATGAGAACTATTGTTAGTTTTCCTAC
TTTTGTAACACTAATAATTTACATATACATGATTTGCAGCTCACACTTCTGTAACAATAAAAAATTATGTATATATAATT
TGCTTTTCTGAAAGTTGATTACATTTTTTTCCTGATCACATTGAAACAAGGAAAACAACACTTCTGTGCAAATATGTTCT
TCAGATCTCTTAGTTTGAGTTCTTGATTTCTTTCTCTCTAATTTATTTCTATTTCGCAGATAGGCCTTCCTTACCCATAC
GATGCATGCCACGACGCCTCCACTATTATTTTATCGGCTTGTGTTGTGTTTAAGTGGTGAAGTGATCGCCGCCCAGGGGT
GTGGTGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTTGCTTGCTGTTTCTTGTC
CTCTCAGACGGTCAGGTTGTCTGGGATTGGGACACCCTCAGAGTTGTTGGGTGTGAATTTAGAGTTGTGGTGTTTTGCCA
GAGATTAGATGCTTCTGACCTTCGGAGGTAGCAATAGATGTCCTGTCAGTCCTAGGCGAGTTCTCCGGTTCCAACGATCG
GTTCTTTAGTACTTCTGTAGTAGTTTATTATTACT---------------------------------------------
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------AACCACCTCGGATTGCTATTTGAAGATTTGAACTAATCTTTTGTTTTCATTGCTTGAGAAAACTAATGGGCAAC
TTATGTTTTTATTCCACATCTATCACCCAAGGACGATA
>chr2A_1
AGGAAAGTCAATTTGGATAAACATGATTTTCTTAAAAAAA--TCATGAACAAGCAAATTAACATTAGTCTATTCAAAAAA
AGTTCACGAATTAG-AAAACGTTCACATATTCACAAAGTTCATTAATAT-GA-AAAAAAA-TGACAAA------------
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--------------------------------------------------------------------TTTGAGAACATT
CATCGTTTCGAAAAAT-AGTTCATCAAATTTGGGAAAAATCAT--------------------CAAATTTGAGAAAAGTT
CATCGAATTTAAAAAAAGTTCATCGACTTTG-------------------AAAAAAAGTTCATCGGTTCTGAAAAA-GTT
CAAAGAATTTCAAAAAAGTTCATCGAG-TTTGAAAAAAACATTTATCGACTTTGAGAAAAGTTCATC-------------
-------GATTCTGAAAAAAGTTCAGTGAATTTTCAAAAAAGTGCATCTA-------------------AATTTGAAAAA
ATGTTCATCAACTTTGAAAAGAGTTCATCAAAA---AGAAAAGTTCATCAAATTTGGAAAAAAAAA--G-----TTTGTC
AATTTTGAAAAAAGTTCATCAAATCTGAAAAAGGTTCACCGAATTTGAGAAAAGTTCCTCGAA---TGAAAAAACG--TT
CATC-------------------AAGTTTGAAAAG---------------------------------------------
-------------AAGTTCATCAATTTTGAT-AAAAGTTCATGGAATTTGA-TAAAAAAAGTTCACATATTTGAAAAAAT
GTTCGC-GTATTTAAGTAAATTAAATGAAAAGGGAACAAGAAAAAAAGAG-AAAAAACAGCCCAGAAATCAGCGAACCAG
TGAGATCGCGACCTAAAAGAAATAAAAGAAAAGAAAGAAATGTTAGACACAAGTTCTTCGTTGTCCTGGTGGTCAGTGTG
CTGCATCCTTAAACGAGGGATCCT--------------------------------------------------------
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>chr6A_1
AGGAAAGTCAATTTGGATAAACATGATTTTCATAAAAAAA--TCATGAACAAGCAAATTAACATTAGTCTATTCAAAAAA
AGTCCATGAATTAG-AAAATGTTCACATATTCACAAAGTTCATTAATAT-GA-AAAAAATTTGACTAA------------
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--------------------------------------------------------------------TTTGAGAACATT
CATCGTTTTGAAAAAC-AGT-------------------TCATCGAATTTGGG-AAAAATCATCGAATTTGAGAAAAGTT
CATCGAATTTAAAAAAAGTTCATTGACTTTG-------------------AAAAAAAGTTCATCGATTCTGAAAAAAGTT
CAAAGAATTTTAAAAAAGTTAATCGAG-TTTGAAAAAA-CATTCATCGACTTTGATAAAAGTTCATCAAATTTGAGAAAA
GTTCATCGATTCTGAAAAAAGTTCATTGAATTTTAAAAAATGTTCATAGA-------------------AATTTGAAAAA
ATATTCATCAACTTTGAAAAAAGTTCATCGAATTTGAGAAAAGTTCATCAAATTCG---AAAAAAA--T-----TGTGTC
AATTTTGAAAAAAATTCATCAAATCAGT-AAAAGTTCACCGAATTTGAGAAAAGTTCATCGAA---TGAAAAAAAG--TT
CATC-------------------GAGTTTGAAAAG---------------------------------------------
-------------AAGTTCGTCTATTTTGAT-AAAAGTTCATGGAATTTGA-AAAAAAAA--TCACGCATTTGAAAAAAT
GTTCGC-GCATTTAAGTAAAT--------AAAGGAACAAGAAAAAAA-----------CGCCCAGAAATCAGCGAACCAG
TGAGATCGCGACCTAAAAGAAATAAAAGAAAAGAAAGAAATGTTAAACACAAGTTCTTCGTTGTCCTGGTGGTCAGTGTG
CTGCATCCTTAAACGAGGGATCCT--------------------------------------------------------
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>chr6D_1
AGGAAAGTCAATTTGGATAAACATGATTTTCGTAAAAAAAAATCATGAACAAGCAAATAAACATTAGTCTACTAAAAAAA
AGTTCACGAATTAG-AAAACGTTCACATATTCACAATGTTCATTAATATGGA-AAAAAAGTTAACTAA------------
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--------------------------------------------------------------------TTTGAGAACATT
CATCGTTTTGAAAAAC-AGT-------------------TCATCGAATTTGGG-AAAAATCATCGAATTTGAGAAAAGTT
CATTGAATTTAAAAAAT-TTCATCGACTTTG-------------------AAAAAAAGTTCATCGATTCTGAAAAAATTT
CAAAGAAATTCAAAAAAGTTCATCCAG-CTTGAAAAG--CATTCATCGACTTTGAGAAAAGTTCATCAAATTTGAGAAAA
GTTCGTCGATTCTGAAAAAAGTTCATTGAATTTCAAAAATTGTTCATCGA-------------------AATTTCAAAAA
ATGTTCATCAACTTTGAAAAAAGTTCATCGAATTTGAGAAAAGTTCATCAAATTCG---AATTTT---T-----TTTGTC
AATTTTGAAAAAAGTTTGTCAAATCTGAAAAAAGTTCACCGAATTTGAGAAAAGTTCATCGAA---TGAAAAAAAG--TT
CATCAAATGAAAAACAATTCATCGAGTTTGAAAAG---------------------------------------------
-------------AAGTTCATCGATTTTGAT-AAAGGTTCATGGAATTTTTTTAAAAAGAGTTCACGCATTTGAAAAAAC
GTTCGC-GCATTTAAGAAAATAAAATGAAAAAGGAACAAGAAAAAAA-AGAAAAAAACCGCCCAGAAATCAGCGAACCAG
TGAGATCGCGACCTAAATGAAATAAAAGAAAGGAAAGAAGTGTTAGACACAAGTTCGTCGTTG-----------------
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>chr7D_1
AGGAAAGTCAATTTGGATAAACATGATTTTCTT--AAAAAAATCATGAACAAGCAAAGAAACATTTGTCTATTCAAAAAA
AGTTCACGAATTAG-AAAACGTTCACATATTCACAAAGTTCATTAATAT-GA-ATTTT-TTTGACTAA------------
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--------------------------------------------------------------------TTTGAGAGCATT
CATCGTTTTGAAAAAC-AGT-------------------TCAT--------------------CGAATTTGAGAAAAGTT
CATCAAATTTAAAAAAAGTTCATCGACTTTG-------------------AAAAGAAGTTCATCGATTCTGAAAAAAGTT
CA--------------------TCGAG-TTTGAAAAAA-CATTCATCGACTTTGAGAAAAGTTCGTCA------------
--------ATTCTGAAAAAAGTTCATTGAATTTCAAAAAA-GTTCATCGA-------------------AATTTGAAAAA
AAATTCATCAACTTTGAAAAAAGTTCAACGAATTTGAGAAAAGTTCATCAAATTCG---AAAAAAAAAG-----TTTCTC
AATTTTGAAAAAAGTTCATCAAATCTGAAAAAAGTTCGCCGAATTTGAGAAAAGTTCGTCGAA---TGAAAAAAAG--TT
CATC-------------------TAGTTTGAAAAG---------------------------------------------
-------------AAGTTCATCGATTTTGAT-AAAAGTTCATGGAATTTGA-AAAAAAAA--T----------------T
GTTCAT-GCATTTAAGAATATAAAATGAAAAAGGAGAAAGAAAAAAAGAGAAAAATACCGCCCAGAAATCAGCCAACCAG
TGAGATCGCGACCTAAAAGAAATAAAAGAAAGGAAAGAAGTGTTAGACGCAAGTGCTTCGTTGTCCTGATGGTCAGTGCG
CTGCATCCTTTAACGAGGGATCCT--------------------------------------------------------
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>chr1D_32
TTAAA--------------------------------AAA--ACATGAACCAGCAAAGAAACATTGGTCTATTAAAAAAA
AGTTCACGAATTAGAAAAACGTTCACATATTCACAAAGTTCATTAACAT-AA-AAAAAGTTCACTAGTTTGAGCAACAAT
TTCAAGAATTTAAAAAATGACCTTGAGTTTGAAACAAAATCATTGATTTGAAAAAAAGTTCATCGAAGCTGAAAAAAGT-
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-----------------------------------------------------------TCATCCATTCTGAGAAAAGTT
CATCGAATCTAAAAAAAGTTCATTGAATGTGACAAAAGTTCATCGCTTCCAAAAAAAGTTCATCGATTCTGAAAAAAGTT
CA--------------------TCAAATTTTGAGAAAA-CGTTCATCGAATTTGAAAAAAGTTCATC-------------
-------GATTCTGAAAAAAGTTCGTTGAATTTGAGAAAATGTTCATC-A-------------------AATTTGAAAAA
AAGTTCATCGACTCTGAAAAA-GTTCATCGGATTAA--AAAAGTTCATCAAATTTG---AAAAAAG--T-----TCATCG
ATTCT--AAAAAAGTTCATCAAATTTGAAAAAAGTTCAGGCAATTTG--------------------GAAAAAAAG--TT
CATC-------------------GATGTTGATGAA---------------------------------------------
-------------AAGTTCATCAATCTTGAAGAAAAGTTCTTCGGTTTTGA-ATAAAAAA--T-----------------
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>chr6A_41
------------------------------------------TCCTGAACAAGCAAAGGAACTA---TCTATTCAAAAAA
AGTTCACGAATTAGAAAAACGTTCACATATTCACAAAGTTCATTAACAT-GGGAAAAAATTCACTAATTTGAGAAACAAT
TTTAAGAATTTGAAAAATGATCATGAGTTTGAAAACAT-TCATTGTTTTAAAAAACAGTTCATCTAATTTGGAAAAAAAT
CATCGAATCTGAGAAAAGTTAATATAATTTGAGAAAAATTGGACGTATTTGAGAAAAGTTCATTGAATTTTAAAAAGTTC
AATGAAAAATCGAAATGTCAAAAAACTCAGAAAAAACCGTTCAAAAAGCCGAAAACATGTAAGGAAAAAAAATAAAAATA
AAATCCGGGGAGAGCGCGCCTTCTGGAGTTTCTGGCGCCCACGCGCTTCCTAATACGGGCCGGCCCATTACGTGGCAAAA
ACCGAAGTGCTCGCTGCTCACAAAAAAATTGCTCAAAACAAAAGCTTTAGGTTGCATTCGGTTCACAGGGAATTGAAGAG
GTTTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTCTCCTACAAGTCTCCCCCCAAATCCCCTCCAATCCCTGTGGGAAGAGGTGTAACCGAACAAAGCCTT
ATGAGGAATCGAACCCGCACGCTAGATCCCTCTGTGCATCTTGCGAACCACTGGACTATCCACATACTCGTGACTCAATT
TAGCATGAACAATAACAATAGTCGCGTTATTAGTGTATCAATTTTTTTTGGAATTATTTGATAACAATTTGGATAAATGT
GATTTTCTTTTAAAAAAGGAAAGTCAATTTGGATAAACAGGATTTTCTTAAAAAAAGACAAAGTTCAGAGATTTCAAAAA
GAGTTCATGAACAAGCAAAGGAACATTGGTCTAATAAAAAAAAATTCACGGATTAAAAAAATGTTCACATATTCACAAAG
TTCATTAACATGGAAAAAAGTTCACTAATTCGAGAAAAAATTATAAGAATTTGAAAAATGATCATGAGTTTGAAAACATT
CATCGTTTTGAAAAAAAAGT-------------------TCATCAAATTTGAAAAAAAATCATCAAATTTGAGAAAAGTT
CATCTAATTTGAGAAAA---------------------------------------------------------------
----------------------------------------ATTCATCGACTTTGAGAAAGTTCGTTGAATTTT-------
---------------AAAAAGTTTGTTGACTTTGAAAAAAGGTTCATCGAATTTGAGAAAAGTTTATAGAATTTGAAAAA
ATGTTCATCGACTTTGAAAAAAGTTCATTGAATTTGAGAAAAGTTCATAAAATTTG---AAAAAAAA-GAAAAATCATCT
ATTCT--AAAAAAGTTCATTAAATTTCAAAAAATATCATTGAATTTGACAAAAATTCATCTTAATTTGAGAAAACG--TT
CATC-------------------GACTTTGAAAAAAATTCATCGAATTTTAGAAAATTTCACCGATTTTGAAAAAAGATA
ATCAAATCCAAAGAAGTCCATCGAATTTGAAAAAAAGTTCATCGAATTTGG-AAA-------------------------
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>chr3B_833
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----------------------------------------------------------------------------GTTG
GATTGATCGGAGATGAGCGCCCGGCGGTTTTTGAACATCCTGGTGTCGGATTGCCAGAAATTCACGTACATGCTGCGGCG
CTTCGACCTATCCCACAACCAGTTCTTCTACCCAACACCAGAAGAAGCAGCGGAACATGCCAAAGTGGTGCCTCCATTGA
CA---GGCATGCCCGACAAGTCAACCCTATCAGCTAACTCCTC------------------GGCGGGGGCGGGGCACAAC
AA------GAAGAAGAAGCCGATG------------------TATATTCGGCCACCGGCACCGATGGTGAACATGAAACC
ATAGAAATGCGCCAAGACTCGGTACGATCGATGGGGCGAGATGGATTGCTTCCCTCTCACTGAAACCAAGCTCTTGTTCA
CCGACAGCTCCGCGAGCATCTTCCGCTTCGATGCCGACACCCACTGCATCGACACCATGCCCAGCCTCCACACGCCCAAG
TCCGACCCCTTGTCCTTCTCCATCCCTCCAAATCCGACCACCTCCAAGGAAGGCGAAGGCGAAGGCGGAGGCCTC-----
TACATCATGGACAGGATCCTCAGGCCCAACAAGGAGGGTCAGGTCCAGTTTGAGTCTATCTCGTACCGCAGGCGCTGCAA
CCA---CTCCAGCAAGGCCTGGCACTGCGACGCCCTCCCGCCGCCGCCTTTCGTCCACGACCCGGCCT------ACAAAC
AAGCCTCCATCTCCTCCTATGCCCTGGTTGGTGGCCACACCATCTGTATCTCCATCAGGGGCGTCGGCACCTACTGCTTT
GACACGCTGGCTTGCGAGTGGAGCAAGGCTGGCAACTGGCTCATGCCGTTTCATGGCAGGGCGGAGTATGACCCGGAGCT
CGGCCTCTGTCTTGGCGTCTCTGAGCGCAACATCCACCTCCCCTGCGTCGCCGACATCTCCGGTGTCCTCAGAGGGGAGG
AGCCGCTGCCGGAGCACACTCGAATTTGGGAGGATACTGACATGCCAGAGGGGTGGTACCCGCACAGTCAG------TGC
TCCACCGAAGTTGTCAGCCTGGGTTCAGGCAGGTTTTGCGTCACCAACTTCGTTGAAACTAAGGACTTCGATGAGCGCTG
CGGCCATTCGTTGGTTGACGACATATTTGCTGTCTTCACCGGCATGGAGCTAGTGTTACCCGGC------------AAT-
-----------GACAATGATGAGGGCAAAGCCAACAGCAACAGCAAG---------------------GGCGACTCCAAA
GGCAATGCCAATGGGAACAGCAACGGGATTGCTGGTGTGCGTATGATTAAGCATAAATCCAGATCTTGCAGGAGTCATGG
AACCAACTTGATCAAGTCTGTGCTCTGATGAGAGCCATAATAGTCTGCTCTCAGGCCATGTCCTACTTGGTCTGCCTGCT
TTACCCTCTCTATCTCTACTCTGATATATGTATTGTAATAAGATACTGTATGTATGTTGAGG------------------
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------------------------------------------------------------------------------CT
TCATTTGCGATATAGTCATGCTGCTCTTTTGTATCTTGCTTTCCCAGTTAGCAATCAAACTTTGAATAATCTTGGGGCAA
AGTGACTGGCGTGCTTTGCCTCTGATGTTATTGTGGAGCAAATCCAGCCTGTATCTAGATTTGCAGTTGAGCAACTGGTT
CAGACACCTGTTTGCTACTCTTAAAATGTCTGTTTGCTACTCTTAAAGTGCTTACTAAAGAGTCTATAACGAAGAAGAGC
TTGTATATGGTGGGAGTGCAAGCTTAAGGTGCCGGCTCCAAATCCAAATGTTTGTTGTGAATCTACGAGTCATGCCTTTG
GCGCCGGCCTTCCTGGCGATGCAATAGATGCCTTTGGCGCCGGCCTTCCTTCCTGGCGATGCAATAGATGCCTTTGGCGC
CGGCCTTCCTGGCGATGCAATAGAGCAAGAACAAGGGCGGGCCTATTCGGCGCCGAACCAGATGGAGACGAACTGCACAA
ATCCGGCTGTCCATTTGTCAAAAAATATGCTGGATGGCGCCTCATTCACATCATCATTCGTGCTATGAACACTCGCACTA
GCTTCTGAAACCAACAAAGAGGTT--------------------------------------------------------
--------------------------ATTTGATGCCACCACATTCTAATGATTTATGAGAACTATTGTTAGTTTTCCAAC
TTCTGTAACACTAATAATTTACATATACATGATTTGCAGCTCACACTTCTGTAACAATAAACATTTATGTACATATAATT
TTCTTTTCTGAAAGTTGATTACAGTTTTTTCCTGATCACATTGAAATAAGGAAAACAACACTTCTATGCAAATATGTTCT
TCAGATCTCTTAATTTGAGCTCCTGATTTCTTTCTCTCTAATTTATTTCTATGTCGCAGATAGGCCTTCCTTACCCATAC
TATGCATGCCACGACGCCTCCACTATTATTTTCTCGGCTTGTGTTGTGTTTAAGTGGTGAAGTGATCGCCGCCAA--GGG
ATGGTGGAGGGGGGGTTCTTTTGTTCTG----------------------------------------------------
-----------------------------------------------------------GGTTGCTTGTTGTTTCTTGGC
CTCTCAGACGAGCAGGTTCTCTAGGATTGGGACACCCTCAGAGTTGTTGGGTGTGAATTTAGACTTGTGGTGTTTTGCCA
GATATTAGATGCTTCTGACCTTCGGAGGTAGCAATGGATGTTCTCTCAGTCCTAGGCGAGTTCTCCGGTTCCAACGATTG
GTTCTTTAGTACTTTC---GTAGTTTATTATTACTTCCAAGGAAATGAGAACAATGTCATGTTGCACTCCTGTTGTTTTA
TTTTAGGAGAGTGGAATTGGATAAGAGAATATTTTGGTGTCGTCCTATTACCATTTGTGATAGCAGATGTCGCGAAGTTA
TTAGTTTGATCGACATTTTCATGTATTGTCCGAGCATGAAATATTGCAATTTGATACGATCCATTAATCTTTTCATGAGA
TTTATTCATCTTCTCATTCCATCTTTCAGTTTTTTTGGGGTACCATCATCTAATGTGTTGATTACTTATGATTACACACT
CTGCGCACCATCATCTAATGTGTTGATTACTTATGATTGCACACTCGGCGCACCATCATCTAATGTGTTGATTACTTATG
ATTACACACTCTGCGCAATCATCAGTTAGGATGAATATGGTTATGTCCGATTACTGATTTTTTTCCTCCTCTTTTGGCCA
GTGTAAAATGTGATGACATGTTGATACAGAGGGAAGGTGCACACTCTTGCTCAACATGAACTATAGTGAGTGAGACCACC
TCGATTTGCATTCAGTAGAGGATAATCAGGAAGAGGTGATCTTATAATCCCCTCAATTATTTGAAGTCTGCTATTTGAGC
TCTACTAACCACCTCATACGGCTATTTGAATATTTGAACTAATTTTTTGTTTTCATTGCTTGAGAAAACTAATGG-CAAC
CTATGTTTTTAATCCACC---ATCACCCAAGTACAATA
>chr3B_833
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----------------------------------------------------------------------------GTTG
GATTGATCGGAGATGAGCGCCCGGCGGTTTTTGAACATCCTGGTGTCGGATTGCCAGAAATTCACGTACATGCTGCGGCG
CTTCGACCTATCCCACAACCAGTTCTTCTACCCAACACCAGAAGAAGCAGCGGAACATGCCAAAGTGGTGCCTCCATTGA
CA---GGCATGCCCGACAAGTCAACCCTATCAGCTAACTCCTC------------------GGCGGGGGCGGGGCACAAC
AA------GAAGAAGAAGCCGATG------------------TATATTCGGCCGCCGGCACCGATGGTGAACATGAAACC
ATCGATATGCGCCAAGACTCGGTACGATCGATGGGGCGAGATGGATTGCTTCCCTCTCACTGAAACCAAGCTCTTCTTCA
CCGACAGCTCCGCGCGCATCTTCCGCTTCGATGCCGACACCCACTGCATCGACACCATGCCCAGCCTCCACACGCCCAAG
TCCGACCCCTTGTCCTTCTCCATCCCTCCAAATCCGACCACCTCCAAGGAAGGCGAAGGCGAAGGCGGAGGCCTC-----
TACATCATGGACAGGATCCTCAGGCCCAACAAGGAGGGTCAGGTCCAGTTTGAGTCTATCTCGTACCGCAGGCGCTGCAA
CCA---CTCCAGCAAGGCCTGGCACTGCGACGCCCTCCCGCCGCCGCCTTTCGTCCACGACCCGGCCT------ACAAAC
AAGCCTCCATCTGCTCCTATGCCCTGGTTGGCGGCCACACCATCTGTATCTCCATCAGGGGCGTCGGCACCTACTGCTTT
GACACGCTGGCTTGCGAGTGGAGCAAGGCTGGCAACTGGCTCATGCCGTTTCATGGCAGGGCGGAGTATGACCCGGAGCT
CGGCCTCTGGCTTGGCGTCTCTGAGCGCAACATCCACCTCCCCTGCGTCGCCGACATCTCCGGTGTCCTCAGAGGGGAGG
AGCCGCTGCCGGAGCACACTCGAATCTGGGAGGATACTGACATGCCAGAGGGGTGGTACCCGCACAGTCAG------TGC
CCCACCGAAGTTGTCAGCCTGGGTTCAGGCAGGTTTTGCGTCACCAACTTCGTTGAAACTAAGGAGTTCGATGAGCGCTG
CGGCGATTCGGTGGTTGACGACATATTTGCTGTCTTCACCGGCATGGAGCTAGTGTTACCCGGC------------AAT-
-----------GACAATGATGAGGGCAAAGCCAACAGCAACAGCAAG---------------------GGCGACTCCAAA
GGCAATGCCAATGGGAACGGCAACGGGATTGCTGGTGTGCGTATGATTAAGCATAAATCCAGATCTTGCAGGAGTCGCGG
CACCAACTTGATCAAGTCTGTGCTCTGATGAGAGCCATAATAGTCTGCTCTCAGGCCATGTCCTACTTGGTCTGCCTGCT
TTACCCTCTCTATCTCTACTCTGATATATGTATTGTAATAAGATACCGTATGTATGTTGAGG------------------
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------------------------------------------------------------------------------CT
TCATTTGCGATATATTCATGCTGCTCTTTTGTATCTCGCTTTCCCAGTTAGCAATCAAACTTTGAATAATCTTGGGGCAA
AGTGACTGGCGTGCTTTGCCTCTGATGTTATTGTGGAGCAAATCCAGCCTGTATCCAGATTTGCTGTTGAGCAACTGGTT
CAGACACCTGTTTGCTACTCTTAAAGTGTCTGTTTGCTACTCTTAAAGTGCTTACTAAAGAGTCTGTAACGAAGAAGAGC
TTGTATATGGTGGGAGTGCAAGCTTAAGGTGCCGGCTCCAAATCCAAATGTTTGTTGTGAATCTACGAGTCATGCCTTTG
GCGCCGGCCTTCCTGGCGATGCAATAGATGCCTTTGGCGCCGGCCTTCCTTCCTGGCGATGCAATAGATGCCTTTGGCGC
CGGCCTTCCTCGCGACGCAATAGAGCAAGAACAAGGGCGGGCCTATTCGGCGCCGAACCAGATGGAGACGAACTGCACAA
ATCCGGCTGCCCATTTGTCAAAAAATATGCTGGATGGCGCCTCATTCACGTCATCATTCGTGCTATGAACACTCGCACTA
GGTTCTGAAACCAACAAAGAGGTT--------------------------------------------------------
--------------------------ATTTCATGCCACCACATTCTAATGATTTATGAGAACTATTGTTAGTTTTCCTAC
TTTTGTAACACTAATAATTTACATATACATGATTTGCAGCTCACACTTCTGTAACAATAAACATTTATGTATATATAATT
TGCTTTTCTGAAAGTTGATTACATTTTTTTCCTGATCACATTAAAACAAGAAAAACAACACTTCTATGCAAATATGTTCT
TCAGATCTCTTAGTTTGAGCTCCTGATTTCTTTCTCTCTAATTTATTTCTATCTCGCAGACAGGGCTTCCTTACCCCTAC
GATGCATGCCACGACGCCTGAACTATTATTTTCTCGGCTTGTGTTGTGTTTAAGTGGTGAAGTGATCGCCGCACAGGGGG
GTGGAGGGGAGGGGGTTCTTCTGTCCTG----------------------------------------------------
-----------------------------------------------------------GGTTGCTTGCTGTTTCTTGGC
CTCTCAGACGAGCAGGTTGTCTAGGATTGGGACACCCTCAGAGTTGTTGGGTGTGAATTTAG------------------
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>chr2A_839
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--TTGATCGGAGATGAGCGCCCGGCGGTTTGTGAACCTGCTGGTGTCGGATTGCCAGAAATTCACCTACACGCTGCGGCG
CTTCGACCTGTCCCGCAACCAGCTCTTCTACCCGACACCGGAAGAAGCGGCGGAACATGCCAAGGTGGTGCCTCCATTGA
CG---GCCCTGCCCAACAGGCCAGACCTAATAAACAACCCCTCGGCGGTGGCGGGGGCGGGGGCGGGGGCCAAGGGAAAG
AA------GAAGAAGATGATGATGATGATGAAGAAGCCGGTTTACATTCGGCTGCCGGCGGCCACGGTCACCATGAAACC
GTCGATATGCGCGATGACCCCGTACGATCGATGGGGCAGGATGTACTGCTTCCCTCTCACCGAAACCAAGCTCTTCTTCG
GCGACAGCTCCACGCGCATCTTCCGCTTCGACGCCGAGACCCACTGCATCGACACCATGCCCAGCCTCCACACGCCCAAG
CGCCCCCCCTTGGCCCTCTCCATCCCTCAGTATCCGGCCATCTCGAAGGAAGGCCAAGGT------GGAGCCCTCTACAA
TACATCATGGATAGCATCCTCAGGCCGCACAGCGAGGGCCAGGTCCAGTTCGAGGCTATCGTGTACCGCAGGCGCTACCA
CCCCACCTCCAGCAAGGCGTGGCACTGCGACGCCCTCCCGCCGCCGCCTTTCGTCCATGACCTGCAGGTTGGTAACAAAC
CGGCCTCCGTCTGCTCGTACGCCTTGGTTGGCGGACACACCATCTGCATCTCTGTCACGGGAGTCGGCATCTATTGCTTC
GACACGGTGACTCGCGAGTGGAGCAAGGCCGGCGACTGGCTCATGCCGTTCCACGGCAGGGCGGGGCACGACCCGGAGCT
CGGCCTCTGGTTTGGTGCCTCTCACAGCAACTCCCACCTCCCCTGCGCCGCAGACATCTCCGGCGTCCTGAGAGGGGAGG
GGCCGCTGCCGGAGCACACACGAATCTGGGCGGACACTGACGTGCCAGAGGGATGGTACCCACCCCGTTACGGTGGCTGC
CCCACCAAACTCGTCAACCTGGGTTCCGGCAGGTTTTGCGTCACCAACTTCTACGAAACTATGGCATATGATGAGCGCTG
CGGCCACTGGTTGGTTAATGACATATTGGCTGTCTTCACGGGCATGGAGGTAGTGTTACCTACCGATGGCAATGGGAAT-
-----------GACAATGATGAGGGTGATTTCAAAGGCAACAACAATGGGAACGACAATAATGGCAATGGCGATTGCAAA
GGCAATGCCAATGGGAACGACAACGTGTCACCTGGTGTCCGTATGATTAAGCATAAATCCAGATTTTGTGGGAGTCACGG
CACCAACATGATCATGTCGGTGCTCTG-----------------------------------------------------
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>chr2B_839
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--TTGATCGGAGATGAGCGCCCGGCGGTTTGTGAACCTGCTGGTGTCGGATTGCCAAAAATTCACGTCCACGCTGCGGCG
CTTCGACCTGTCCCGCAACCAGCTCTTCTACCCAACACCAGAAGAAGCAGTGGAACATGCCAAGGTGGTGCCTCCATTGA
CGCCGGGCATGTCCAACAAGCCAGCCCTAACAACCAGCCCCTCGGCGGTGGCCGTGGCCGGGGCGGGGGCGGAGCGAAAG
AA------GAAGAACAAGATGATGA---TGAAGAAGCCGGTTTACATTCGGCTGCCGGCGGCCACGGTCACCATGAAACC
ATCGATATGTGCGATGACCCCTTACGATCAATGGGGCAGGATGTACTGCTTCCCTCTCACCGAAACCAAGCTCTTCTTCG
GCGACAGCTCCACGCGCATCTTCCGCTTCGACGTCGAGACCCACTGCATCGACACCATGCCCAGCCTCCACACGCCCAAG
CGCTCCCCCTTGGCCCTTTCCATCCCTCAGGATCCGACCACCTCGAAGGAAGGCGAAGGT------GGAGCCCTT-----
TACATCATGGACAGCATCCTCGGGCCTTACAATGAGGGTCAGGTCCAGTTCGAGGCTATCGTGTACCGCAGGCGGTTCCA
CCCCTGCTCCAGCAAGGCGTGGCACTGCGACGCCCTCCCGCCGCCGCCTTTCGTCCACGACCTGCAGGTTGGTAACAAAC
CGGCGTCCATCTGCTCCTACGCCTTGGTTGGCGGCCACACCATCTGCATCTCCGTCACGGGAGTCGGCACCTATTGCTTC
GACACGGTGACTCGCGAGTGGTGCAAGGCCGGCGACTGGCTCATGCCGTTCCACAGCAAGGCAGAGCACGACCCGGAGCT
CGGCCTCTGGTTTGGCGTCTCTCACAGCAACTTCCACCTCCCGTGCGCCGCAGACATCTCCGGTGTCGTCCGAGGGGAGG
AGCCGCTGCCGGAGCACACACGAATCTGGGCGGACACTGATGTGCCAGAGGGATGGTACCCGCACTACC---------GC
CCTGCCGAAGTCGTCAGCCTCGGTTCGGGCAGATTTTGCGTCACCAACTTCTTCGAAACTAAGGACTACGATTGCCGCTG
CGGCCACTGGTTGGTTGATGACATATTGGCTGTCTTCACGGGCATGGAGGTAGTGTTACCCGGC------------AATG
GCAATGGGAATGACAACGACGAGGGTGATTTCAAAGGCAACAACAATGGGAACGACAATAATGACAATGGCGATTGCAAA
GGCAATGTCAATGGGAACAGCAACGGGTCACCTGGTGTCCGTATGATTAAGCATAAATCCAGATTTTGTGGGACTCACGG
CACCAACATGATCATGTCAGTGCTCTGATTCACATATTTTGAGGCATAAGAGCA--------------------------
--------TCTAGCTCTCCCATCAAATCTGTTTTAACTCCCTAATTAAATTTGAGGGGTTAAACCCCTTCCGGCCCTTCC
CTCAAATTTGCCTCTCCATGCTTAAATTTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCCTCCTAAATTATTTTTCCTTCCAGACACTATTTTTCCTTTGGCAGTCACCCAACAAACCGCCGTCCATCACTGCCC
ATCTCCACACCGGTGGCGCAATACCCTCACTGCCATGCACCGCAACCCTAACAGCTGACCCCTCGGCGGTGGCCGAGGCG
GGGGCGGAGCGAAAGAAGAAGAAGATGATGAAGATGAAGAAGCTGGTTTACATTCGGCTGCCGGCGGCCACGGTCACCAT
GAAACCATCGATATGCGCGATGACCCCGTACGATCGATGGGGCAGAATGTACTGCTTCCCTCTCACCGAAACCAAGCTCT
TCTTCGGCGATAGCTCCACGCGCATCTTTCGCTTCGATGCCGAGACCCACTGCGTGGACACGATGCCCAGCCTCCACATG
CCCAAGCGCTCACCCTTGGCCCTCTCCATCCCTCCCAATCCGGCCACCTCGGAGAAAGGCGAAGGTGGGGCCCTCTACAT
CATGGATAGCATCCTCAAGCCCGACAGCGAGGGTCAGGTCCAGTTCGAGACTATCATGTACCGCAGGCGCTACGACATGT
CCCTACCCAACTCCAGCATGGCGTGGCACTGCGACGCCCTCCCGCCGCCGCCTTTCGTCCACGACCAACAGGTTGGTAAC
AAACCGGCATCCATCTGCTCCTACGCCTTGGTTGGCGGACACACCATCTGCATCTCCGTCACGGGAGTCGGCACCTATTG
CTTCGACACGGTGACTCGCGAGTGGTGCAAGGCCGGCGACTGGCTCATGCCGTTCCACGGCAAGGCAGAGCACACCCGGA
GCTCGGCCTCTGGTTTGGCGTCTCTCACAGCAACTTCCACCTCCCGTGCGCCGCAGACATCTCCGGCGTCGTCAGAGGGG
AGGAGCCGCTGCGGGAGCACACACGAATCTGGGCGGACACCGACGTGCCAGAGGGATGGTACCCGCACTACCGCCCGGCC
AAAGTCGTCCGCCTTGGTTCGGGCAGATTTTGCGTCACCAACTTCTTGAAACTAAGGACTACGATTGCCGCTGCGGCCAC
TGGTTGGT------------------------------------------------------------------------
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----------TGATGACATATTGGCTGTCTTCACGGGCATGGAGGTAGTGTTACCCGGCAATGACAATG-----------
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>SNPs
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---------S----------------------------------------------------------------------
----------S---------------------------------------------------------------------
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------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------SSSS--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-----S----------------------------------------S---------------------S----------
------------------S-------------------------------------------------------------
--------------S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
-----------------------S--------------------------------------------------------
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--SSSSSS------------------------------------------------------------------------
-------------------S-----------------------S------------------------------------
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---------S----------------------------------------------------------------------
------S-------------------------------------------------------------------------
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--------------------------------S-----------------------------------------------
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-------------------------------------------------------------S-S----------------
-----------------------------------------------------------------S--------------
-------------------S--S-----------------------------S---------------------------
--------------------------------S----------------------------------------------S
--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S-
----------SS----------S----------------------------------------S----------------
--S--------------------------------S-----S--S---------------------------------S-
--------------SSSSS-------------------------------------------------------------
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---------------SS-SS----------S------------S-------------------------------S----
S----------S-----SSSS----------S--S---
>forward_2076
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-------------------------------------------------------AGATCCTCTTTCCTTCCTGCG----
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>reverse_5439
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------------------------------------------------------------------------------TC
CTCTCAGACGGTCAGGTT--------------------------------------------------------------
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--------------------------------------
