>input_sequence_60151
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----------------------------------------------------------------------------GTAT
ATATGAGCAGCTTGGTGAGCAGAGGAGCAGGAGCACCACAATGACCATCGCATTCTTTTCCATCCTCCTAGTCCTAGTCC
TATCAGCCATTTCTGTAGCT---------GCTTCCTCTCCCAACCGCAATGGCAGTGACACAGACCTTGCCACTCTGCTG
GCTTTCAAAGCCCAGTTCTCCGACCCTCTTGGTGTCCTTGCCGGCAACTGGACAACCAGCACATCATTCTGCCACTGGGT
CGGCATCAGATGCAGCCGGCGGAGGCAGCGAGTCACAGCTCTGTCGCTGCCGGATACACCTCTCTATGGACCCATCACAC
CTCACCTCGGTAACCTCTCTTTCCTCTCTGTCCTCAGTCTCAACAACACCAACATCACGGGTTCCATCCCACATGATTTA
GGTAGACTACATCGCCTTGAATTCCTGAGACTTGGCTACAATGGCCTGTCAGATAGCATCCCTCCTACTATAGGAAACCT
CTCAAGGCTTCAAGTTCTTGACCTAAAACTGAACCTCCTATCTGGTTCAATCCCGCTAGAGCTACGTAACCTGTACAATC
TTGCCTAT--ATAAATCTCATGAAAAATTCCATTAGTGGATCTATACCGACCGACATGTTTAACAATACCCCTATGTTAA
CTTATTTAAACTTCGCCAACAATAGCCTGTCAGGGTCAATACCATCCTGCGTTGGCTCCTTGCCACTGCTCCGCAACCTT
ATTATGCATTACAATCATCTCACCGGCCTAGTGCCTCCTTCCATTTTTAACATGTCTAAACTGCAGGGTATCTATCTCAC
CCATAACT---ACTTAACTGGTTCTTTCCCTACAAATGCAAGTTTCAATCTCCCGATGCTACAGATTATTGCCATAGGAC
AGAACAATTTCACAAGCCATGTTCCATTGGGCCTTGCGTCTTGTCAATACCTCAAAGTTATTTCCTTCTCCCTTAATTCA
TTTGAGGGTGTTGTGCCAACATGGCTAGGCAAGTTGACTCGTCTCATTTGGTTGGCCATGGGCGAGAATGGCCTTTTCGG
GTCAATTC--------------------------CTAGAGCTCCTTGACCTCGGATCCTGCAACCTAACAGGAGCCATTC
CAACAGAACTCGAACAGTTAAGTCAACTGTCACAA---------------------------------------------
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--------------------------------------------
>chr3A_1_TraesCS3A01G446000
GCAAGAGGGATTAAACTTATCCGGTTTTCAAAGTTGAGGGACTAAGTTTTACTGGTTTTGAAGTTGAGGGATTATTTTAT
ATTCTTGAAAGAATTGAGGGACAAAAAATATAGTTTCCCCTTTATTTTATGTTTACGCACGGAAGCAGATGAGCTCAAGC
GCCGTTTCATCGCGTCCATGCATTCTTTCTTTCTCTGCTTTCTCTCTCCAGATCACGCTCTTTTTCCCGAGGATACCCGG
TTCCTGTGCAGGCTACACCTCATCTCTGCAAGCGGCTGCCTTTTCCATCTCTCTCCTCCACGGCTGCCTTTTCCATCTCT
CTCCTCCACGGCTGGTCACCTTCACCGTGGACCTGCGGGGCAACGGTCCACACTAGAGCGTTGGCCTTGCCTAATGAATC
ACTGCCAGTGCAGAGTTCC-------------------------------------------------------------
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----------------------------------------------------------ATATATCTAAGAGGTTTATCTT
CACAAACTTAT---------------------------------------------------------------------
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-------------------------------------------------------------TTATCTTAACATGCAAAC-
------------ATACAATTATGAATGGGATAAAACCCACCTCAACATGTAATTATGCATAAAAAAACCACCACAACAAT
TGACCATGCATGGGAAAATATTTTTATGTAATTTTTCTACTTATATTCAATAAATATTTTACAATTATAGATAATCAAAT
ATAAT---------------------------------------------------------------------------
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---------------------------------------------------------------------------AAGTC
ATATGTATTTTTAATTTTGGTTCTGATATCAATCAAAAAA-TTGTCAACTAATTCCCTCAGCACAGCACA---CACGGGT
ATCCT----------CATTCGGATATTAGATTCTTCCTGCCACTGGTTCATTGTCTAGACGAGATATGCCCC-ACTCC--
-TCATAGGTACCAAAGT------------------TGCGTTTGATAATCACGACATGTTGAACAGGTTCGATGTTTCCGC
GTGCAATACAAACAGCCAGAGAGCCACTTGGTACAA--------------------------------------------
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---AGTGCCAGAGAAAAAGGCA-----CACTTGATAGAGCTTTCTTTGT----------------AAGCTCCTTCCTTCC
AAGAAAAAGGCAGCTTGGATTCCCATTAGCAGCCCCACTTGAGCGAAAGTTCGTCTGAACCACACTTGAAATGTGTGTAT
ATATGAGCAGCTTGGTGAGCAGAGGAGCAGGAGCACCACAATGACCATCGCATTCTTTTCCATCCTCCTAGTCCTAGTCC
TATCAGCCATTTCTGTAGCT---------GCTTCCTCTCCCAACCGCAATGGCAGTGACACAGACCTTGCCACTCTGCTG
GCTTTCAAAGCCCAGTTCTCCGACCCTCTTGGTGTCCTTGCCGGCAACTGGACAACCAGCACATCATTCTGCCACTGGGT
CGGCATCAGATGCAGCCGGCGGAGGCAGCGAGTCACAGCTCTGTCGCTGCCGGATACACCTCTCTATGGACCCATCACAC
CTCACCTCGGTAACCTCTCTTTCCTCTCTGTCCTCAGTCTCAACAACACCAACATCACGGGTTCCATCCCACATGATTTA
GGTAGACTACATCGCCTTGAATTCCTGAGACTTGGCTACAATGGCCTGTCAGATAGCATCCCTCCTACTATAGGAAACCT
CTCAAGGCTTCAAGTTCTTGACCTAAAACTGAACCTCCTATCTGGTTCAATCCCGCTAGAGCTACGTAACCTGTACAATC
TTGCCTAT--ATAAATCTCATGAAAAATTCCATTAGTGGATCTATACCGACCGACATGTTTAACAATACCCCTATGTTAA
CTTATTTAAACTTCGCCAACAATAGCCTGTCAGGGTCAATACCATCCTGCGTTGGCTCCTTGCCACTGCTCCGCAACCTT
ATTATGCATTACAATCATCTCACCGGCCTAGTGCCTCCTTCCATTTTTAACATGTCTAAACTGCAGGGTATCTATCTCAC
CCATAACT---ACTTAACTGGTTCTTTCCCTACAAATGCAAGTTTCAATCTCCCGATGCTACAGATTATTGCCATAGGAC
AGAACAATTTCACAAGCCATGTTCCATTGGGCCTTGCGTCTTGTCAATACCTCAAAGTTATTTCCTTCTCCCTTAATTCA
TTTGAGGGTGTTGTGCCAACATGGCTAGGCAAGTTGACTCGTCTCATTTGGTTGGCCATGGGCGAGAATGGCCTTTTCGG
GTCAATTC--------------------------CTAGAGCTCCTTGACCTCGGATCCTGCAACCTAACAGGAGCCATTC
CAACAGAACTCGAACAGTTAAGTCAACTGTCACAATTGAATCTTTCGGAGAACGAGCTAATAGGACCCATTCCCGCTTCT
CTTGATAATGCAACTGAATTAGCAATCCTATTGTTGGACCAAAACATGTTGACTGGACCAGTACCTAGAACTATCGGTAA
CATGAACTCTTTGATAATCCTTGATATTTCAACTAACTACCTACATGGGGATGTCAACTTCTTACCCGTTTTCTCTGATC
TTCCAAATCTCCAATACCTTAGCATCAAGTCAAATAATTTCACGGGTAGCCTCCCTAACAATGTAGGGAACGGCAAGCTA
CTGCCGGAGACTGGAGGAGACCCCCTCTCCCTCCCCCACCCCCTC-CCCCTCCCCCGCGCCGCCCCTAGCGGGTGTCTCG
GGGGTTGATTCCCCTCCCGCCGGCGTAACCTCCCTCTCTCTCCATCTCTCCTCGCCGCCGCACGAGGCTGG---------
--------GGTGCGGTCTGGGA------------------------------CTGCGGCGGCGGGTCTCGGATCCGGGCG
GCGGCCCCTGGCGAGGCTCCCTGTCTCCTGCGGCGGGCAGTGGGGTTGGCGTGGTGCCGGCGATCTTGTCGGGTGGTCGA
CGGATCTCCGGTGGCCTGGGGCCTCGCGTGGCTGCCTTGGCGGCTGGCGGCGCCAGATCTGGCTGCTGGCCTTCTTCCCT
GCTCGGTGCGCTTCTCCTGCGAGGGTCCCTGGGTGTGTTGTATGGCCTGCCTATGGGATGCGGGCGATTCTGGTGGTCAG
GATCCAGATCGGGGGAAACCCGGGTCGGCTCCGGCCGGCCGCGACGACGACGACGCCCGCGGGCG-CGATTTCTTCATGG
AGACGTCTGTCAAGGTCTGCGTCTGCCCTTCTACTCCCCACCACCTAGCTTCTCGGGTGAAAACCTAACTCCGGTGGGCG
GCGGCAGCGTCTTTGGCGCCGCGACCTTCTTGAAGGCGCCGCCTTGAGGGTTGGGTGGTGGCGGGCGCTGTTTGGGGTCG
GTGACAGCTGCCGACGGCGTGCCCTTCTTGGCCCAAGCCTCCGC
>chr3D_119
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--------------------------------------CCTTTATTTTATGTTTACGCACGGGAGCAGATGAGTTCAGGA
GCCGTTTTATCGCGTCCATACATTCTTTCTTTCTCTGCTTTCTCTCTCCAGATCGTGCTCTTCTTCCGGAGGAGA-CCGG
TTCCTGTACAGGCCACACCTCATCTTTGCAAGAGGG----------------------------TGCCTTTTTCATCTCT
CTCCTCCACGCCTGCTCACTTTCGACGTGGACCTGCAGGGCAACGGTCCACACTGGAGCGTTGGCCTTGCCTTAGAGCAT
CTTCAACAGCCGCGTCAAAAGACGCGCGCGTGATAAACAAGCATTTTAGCGCGCGCGGGACGTTTTCGCGTGCTCCAGCG
GAGGCGGGAAACTAGCGCGCGCGGGAAAAAGCCGCAGCTCGCGCGCTAGATTTAGCGCACCGTGTCCGGCGCGCCTATAA
AATTGCAGCGCCCTCTGTCGCTCTCTTGTCGCTACCTCTACCGCTTTCTCTCCTCGCTGCTGATACGCCACCACCGCGCC
ACCATGCTGCCTCGCGTGCGTCCGTCCGACACCTACTCCGCCGAGATTCGGTCGGGCGACGTGCGCCTCGGCCTCGGAAC
CTTCGACACCGCCCAGGAGGGCGCCCGCGCGTACGGACGCTGTGGCGTGGCGCCTCCGGCGGTCCCGTTGGGACATGAAC
TTCACGGACGTGGCGACGCGGGAGCGGGCACAGGAGTTGGCGCCTCTCCCGCGGCTTATCACCGACGAGGATCGTTGCGA
GAACCGGAGGCGGGAGCCGTATCAGCCTGGCCGAGATGGACGAGGAAGCCATGGCGCTGTGGTGCCAACGCTTCCCGCAA
GACATCATCAACGAGCAACAGTTCTTCGCCGAGAGGAGGGCGGAGAGGGATGAGAGGAGGGAGGAGCGAGCCGCCTACCG
CGAGGACAAGCGAACGCGGAAGGCGGTCGCTAAATTCAACATCGCGCTAGGAGATGCGTCGTCCTGGGACTCCAACGACG
AGCGGTTCCTTGACGCCTACGCTCAGACGTCGGAGGAGGACATCACCGAGGCAGAGTCTGAGTCAGAGAATGACGAGTAG
TAGTAGTTTTTCGTTTTATCTATCTATCGTAGAAGAAGACTATGAACTATCTATGCACTATTTTGTATCGTAGAAGCAGG
CTATGTGACGAACTATCTCACATTTTTACTATCGGAACCAAATGTGTACCGAATCGTAGTTCAAATAGTAGGCGTCAAGA
AAAAAAAGATGAAATATAGCGTGCGAGCGGTTCGGACGCGCTTTATTTTGCGGCGGCCGCTGTAGTCAGCGCACCGCCGC
GCGTAAAAGCTGCGCTGTATTATGATTTTTAGCGCGCCGCGCGTTGGGTGTCTGTTGGAGATGCTCTTATGAATTACTGT
ATATTACGTACTTTGTATTATACTTTCTCCGTTCCTAGATATAAGTTTTTTAGAGATTCCACTACGAAGTACACACTGAT
GTATATAGACATACTTTAAAGTGTAGATTCACTTATTTTGCTCCGTATGTAGTTTGTAGTACAATCTCTAAAAAGACTTA
TATTTAGGAACGGAGGGAG--------------------------------------TATATATCTAAGAGGTTTATCCA
CGCTAACTTATTTATCT---------------------------------------------------------------
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-------------------------------------------------------------------TAAGATGCAAACA
TACCACATCATCATACAGTTATGAATGGGATAAAACCCATCCCAACATGTAATTATGCATAAAAAAACTACCACAACAAT
TAACCATCCATGGAAAAATATCTTCGTTCAAATTTTGCACTTATATTCAATAAATATTTTACAATTATAAATAATCAAAT
ATAAT---------------------------------------------------------------------------
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---------------------------------------------------------------------------AAGTC
ATATATATTTTTAATTTTGGTTCTGATATCAATCAAAAAAACTGTCAACTAATTCCCGCAGCA----GCAACACACGGGT
ATCCTCTAGTTTATACATTCGGGTATTAGATTCTTCCTGCACCTGGTTCATTGTCTAGACGAGATATGCCCC-AGTCCCC
ACCATAGGTACCGAAGTTTGACTAACCTTTCTGCATGCGTTTGATAATCACGACATGTTGAACAGGTTCGATGTTTCCGC
GTGCAATACAAACAGCCAGTGAGCCACTTGGTACAA--------------------------------------------
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---AGTGCCAGAGAAAAAGGCT-----CACTTGATAGAGCTTTCTTTGTCATCGTCACGTGTGCGAAGCTCCTTCCTTCC
AAGAAAAATGCAGCTTGGATTCCCATTAGCAGCCCCACTTGAGCGGAAGTTCGGCCGGACCACACTTGAAATGTGTATAT
ATATGAGCAGCTTGGTGAGCAGAGGAGCCGGAGCACCACAATGACCACCGCCTTCTTTTCCATCCTCCTAGTCCTAGTCC
TATCAGCCATTTCTGTAGCT---------GCTTCCTCTCCCAACCGCAATGGCAGTGACACAGACCTTGCCACTCTGCTG
GCTTTCAAAGCCCAGCTCTCCGACCCTCTTGGTGTCCTTGCCGGCAACTGGACAACCAGCACATCATTCTGCCACTGGGT
CGGCATCAGATGCAGCCGGCGGAGGCAGCGCGTCACCGCTCTGTCGCTGCCGGATACACCTCTCTATGGACCTATCACAC
CTCACCTCGGTAACCTCTCTTTCCTCTCTGTCCTCAATCTCAACAACACCAACATCACGGGCTCTATCCCACATGATTTA
GGTAGACTACATCGCCTTGAATTCCTGAGACTTGGCTACAATGGCCTGTCAGATAGCATCCCTCCTACTATAGGAAACCT
CTCAAGGCTTCAAGTTCTTGACCTAAAACTGAACCTCCTATCTGGTTCAATCCCGCTAGAGCTAAGTAACCTGTATAATC
TTGCCTAT--ATAAATCTCATGAAAAATTCCATTAGTGGATCTATACCGACCGACATGTTTAACAATACCCCTATGTTAA
CTTATTTAAACTTCGCCAACAATAGCCTGTCAGGGTCAATACCATCCTGCGTTGGCTCCTTGCCACTGCTCCGCAACCTT
ATTATGCATTACAATCATCTCACCGGCCTAGTGCCTCCTTCCATTTTTAACATGTCTAAACTACAGGGTATCTATCTCAC
CCATAACT---ACTTAACTGGTTCTTTCCCTACAAATGCAAGTTTCAATCTCCCGATGCTACAGATTATCGCCATAGGAC
AGAACAATTTCACAGGCCATGTTCCATTGGGCCTTGCGTCTTGTCAATACCTCAAAGTTATTTCCTTCTCCCTTAACTCA
TTTGAGGGTGTTGTGCCAACATGGCTAGGCAAGTTGACTCGTCTCATTTGGTTGGCCATGGGCGAGAATGGCCTTTTCGG
GTCAATCCCTAGCACGCTTAGCAACCTCACTTCGCTAGAGCTCCTTGACCTTGGATCCTGCAACCTAACAGGAGCCATTC
CAACAGAACTCGAACAGTTAAGTCAACTGTCACAATTGAATCTTTCGGAGAACGAGCTAATAGGACCCATTCCTGCTTCT
CTTGATAATGCAACTGAATTAGCAATCCTATTGTTGGACCAAAACATGT-GACTGGACCAATACCTGGAACTATCGGTAA
CATGAACTCTTTGATGATCCTTGATATTTCAACTAACGACCTACATGGGGATGTCAACTTCTTACCCGTTTTCTCTAATC
TTCCAAATCTCCAATACCTTAGCATCAAGTCAAATAGTTTCACGGGTAGTCTCCCTAACAATGTAGGGAA----------
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>chr3B_304
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---------------------------------------------------------------CTGTCTTTTCCATCTCT
CTCCTCCACAGCTACTCACTTTCGACGTGGTCTTACCGGGCAACGGTCCACACTAGAGCGTTGGCCTTGCCTAATGAATC
ACTGCGAGTTTCA-------------------------------------------------------------------
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-------------------------------------------------------------------------------T
CTATTATGTATACTGTATTATCAATAATGCTAAACATACAAAGAGTTACACGCAATTACACGCTGACTAGGATTTTTTTC
ATCTACTAATCAATCACAAACTTACCCCACCTGATTTTCAAGGGGGTGGGCCGCCTCCCAATCTATCGACCAATCAAATT
AACTCTCTTTGTAAAACCTTGTAACTCGTTTGTACGTGTAGCATTACTCCTGTATTATATATGTCTAAGACATTTATCCT
TACTAACTTATTTATCTTTTTTTTGCATGATAATACGTGTCTCACTCATATCATAAAGAACAAAGTACAAGTCACGTAAA
AACCGACATGATAAATCTGAAAAGATAGCAGAACATCTTCGAGCTTGACACTAACGCCCGTCACCTGCCTCCGGCACCAC
CATAGCAACCACCAAAAAAAAGAATGACAGATCACCTCCTCACCCGAGCTCGACGCGGCTCCATCGCTGATATGCAGCTT
TGCGGACCTCCAAGGTGGCTCACCAAAAGTGAAGCCATTGCCGTTGAACGAATCAGACCAGGGCAACATCCCAGACAGGC
CATCGAACTCCAGATCTGGCACCCCACCACGACTAAGACGCCGAAGGAGGAAACCATACCTGCCATCCACGAACCACGAA
CCCAGCACACATTTCGTCTTCCAGGTGCCGTCGATGCAGACCACAATCTGCATCCGCTCCTGGACTACCTCCCAAGCTCC
ACGCCAACGCTGGAGCAAATGTCGTCACAACGGCGGAGCCCGAGGGCACATGTCCACCATGAGGATGCCGCCGCCGCCAT
GCCATCCTTGTTTGAACAGACTGATTTCCAAATCCATCCCCAACCACAAGACCGATGGCCTCATCAGGGAAGGATCTGAA
GAATCTTTATTCAGCGTCGTCATCGTTGCCGCCGAAGCAAAGACGATGAACAGCCAAGAAACCTAGACTACACAGGAGTA
AAAATGATCCACGCGCGTGGATTTGGCGACCCCCCTCACCACCGACAACCGAGATCGCCGGCGGAGGGGAGCCGCCGGAG
GACGGCGCTAAAGTTGGCCTCTCCTGGCGGCGGCTAGGATGCACGCACGTCTTCCGTTCCCTTATCTTAACATGCAAAT-
------------ATACAATTATAAATGGGATAAGACCCACCTCAACATGTAATTATGCATTAAAAAAC-ACCACAACAAT
TAACCATGCATGGGAAAATATTTTCATTCAATTATTCTACTTATATTCAATAAATATTTTACAATTATACATAAGCAAAT
ATAATTTTTAGAGAAAAGGCACGAAGGCCCGACATCAAATTAATGAAGCCATCAACCGGCTAGGATACAATGGTGCTGAA
TTACATAGGCAAAGACTTGACCAAAAACTGAAAAATACATGCCAAATTCACTACGACCCGGAGCAGCAGCACACAGAGCA
TCAAGAGAAACTGCGATCAAGCCGCCAGAGATCTTGTGCAGATAGAACGGCAGGGCCGAAGCCACCCTGCGTCGACAATT
GCCGTGGACATGAAGGCCCAAACCGCTTGAAGGAAACCATCGACTCCGCCGCCCGCTGCCTCGGGCCACTCCCGGAGGGG
AGACCACTATCTCCCCTTCGTCTAGACCATGCCGAACACGCGAACACCCACCACTGGCCGGCAACCAACCAACAAACAAG
GCGGGGAGCCACTGACAGATGCGGAAGAACCCACACGCCACCACCAATGCCGACAACCAGGGGAACCGAGCACCGCTGCC
TCCACCCACCACCAAGCACCACCCCCAACCGCCAACCACCCCTTGAACGACGCCTCCAGGAGGACCGAGACGCCAGAACG
CCTCCGCCGTCTGGACAAAAGGCCAAGACTTTCGCCCAAAGCAGGAAGGGGAAAGAGGGGGACGATCTGGAAGCTCGACC
CGCCCTCAAGAGAGGAACAACACCGGAGCGCCGCCGACGTCGAGGTCGACGCGAAATCGACCAGGGGTTTCCCCCGTTCC
AAGAATTCACCACCCCATCCCTCGGCCAGATCTGACGGGCCAGCCACCAAATCAGGAGAGGAAGCCATCGCGAGGGGAAG
GGGCCGAGAGGAAGAAGAGCCGCCAGATGGGAAAACCAGCACCGGCACGCGCCATCCACCGGAAAGATCGACGCCGCCAT
CTCCACCCAGGGCCGCCACCCTAGCTTCCAGAGCCCCTCACAGCGGCGTGCTGCAGCAGATCCTCGCCGCCACCTTCACC
GGAACACGCGCAATAGCCGGCAGGATCCTCAGGTGGCGGCGGGGCGGGAGGGGGGGGAGGAGGAGAGGTGGCGACGACTA
GGGTTTGGGGTCGCTCCCGAGTCGCCCAAGAGGGGCGACACGAGAGCGGGAGGGGGGGCTCTGAGATGAGGCTTTTGATC
CGTAATCAAATATGAGAAATGATTAACATTAACCGATTGATTATCATGCTCGCGTCCGCCATCCTGGTTGCGCGACATGT
GGCCTACTGGACTACCCACGTTTCTCTCCCTAATCTTATCTCTTCCTCAACCTTTTCCCGTGCGCAGCCACCACCATCTC
CTTCAGCAACGCTCGCCATGGCCGCCACCATCTTAAGCTCCTGCTGCAACGCCAGCTTCGGTCATGCCCACGACCACCTC
AAGCTCCTGCGGCAACGCCCGGCTCGGCCATGGATCTTCCTGCCGTCAGAACCAACTCCTTCATGTCATGGTCTCTATTT
GAAAAAAGAAACTCCAATATGAACTCTGTTGCAAAAAATAATCTGCAACTTGACCCTTGTTGCAAAAAGATTTTTGCAGT
CGATATTTAAAATTTCTGCAATAAGACCTTTGTTACGAAAAATTTCCGCAATAAGACCTTTGTTGCAAAAAAAATGCAAC
AAGATTTTTATTGCAAAAAAATTCTGCAACAAGAACCCTGTTGCAAAAATAAATAAATAAATAAGTTATGCAACAAGACC
TTTATTGCGATAAATTTCCGCAACACGACCTCTGTTGCAAAAAAATAAAGAAGTACATGCTCGTGTGATTGCAACAAGCT
AGCTATTGCGGAGGGCCTTCTACGACACCCCTCCAAAGAGATGGCTGCTTTCGGGTACTCCTAGATCGGACATCCGTTAA
CGTTACATCCAATGGTTAGCGAGCCGACAGATCTCTCTAATTATCCGCCAGTCGTACGCGTCGACCATCAAATACAAGTC
ATATGTATTTTTAATTTTGGTTCCGATGTCAAT-AAAATAATTGTCAACTAATTCCGGCAACA----ACA---CATGGGT
ATCCTGTAGTTTATACATTCGGATATTAGATTCTACCTGCAGCTGGTTCATTGTCTAGACGAGATATGCCCCCACTCC--
-CCATAGGTGCCGAAGTTTGACTAACTTTTCTGTATGCGTTTGATAATCACGACACGTTGAACAGGTTCGATGTTTCCGC
GTGCAATACAAACAGCCAGAGAGCCACTTGGTACTCGCTCTGGTTCAATATACAGTGCGCATGGTCTGTAGCTTCAAGTG
GAGCTGTACTTTTGGACCATAGTAACCCTGCATGCACACACTCTGTACACATGCATGTGGATGTGGCCGCACCTCCGGTG
AACAGTCTAGGGTATTTTCTGTCCAAAGTAGCTCACGGGCACTACATTGTGGAATTCTAGCAAAAAACTAATACCCACTA
CATACTGACAGAGAAAAAGGCACACTCCACTTGAAAGAGCTTCCTTTGTCATCGTCACGGGTGTGAAGCTCCTTCCTTCC
AAGAAAAGGGCAGCTTGG----CCATTAGCAGCCCCACTTGAGCGAAAGTTCGGC-GAACCACACTTGGA--GTGTGTAT
ATATGAGCAGCTTGGTGAGCAGACGAGCAGGAGCACCACAATGACCATCGCATTCCTTTCCATCC------TCCTAGTCC
TATCAGCCATTTCTGTAGCTTGTTCCGGCGCTTCCTCTCCCAACCGCAATGGCAGTGACACAGACCTTGCCAGTCTGCTG
GCTTTCAAAGCCCAGCTCTCCGACCCTCTTGGTGTCCTCGCCGGCAACTGGACAACCAGCACATCATTCTGCCACTGGGT
CGGCATCGAATGCAGCCGGCGGAGGCAGCGCGTCACAGCTCTGTCGCTGCCGGATACACCTCTCTATGGACCCATCACAC
CTCACCTCGGTAACCTCTCTTTCCTCTCTGTCCTCAATCTCAACAACACCAACATCACGGGCTCTATCCCACATGATTTA
GGTAGACTTCATCGCCTTGAATTCCTGAGACTTGGCTACAATGGCCTCTCAGATAGCATCCCTCCTACTATAGGAAACCT
CTCAAGGCTTCAAGTTCTTGATCTAAAACTGAACCTTCTATCTGGTTCAATCCCGCTAGAGCTACGCAACCTGTACAATC
TTGCCTAT--ATAAATCTCATGAAAAATTCCATTAGTGGATCTATACCGACCGACATGTTTAACAATACCCCTATGTTAA
CTTATTTAAACTTCGCCAACAATAGCCTGTCAGGGTCAATACCATCTTGCGTTGGCTCCTTGCCACTGCTCCGCAACCTT
ATTATGCATTACAATCATCTCACCGGCCTAGTGCCTCCTTCCATTTTTAACATGTCTAAACTGCAGGGTATCTATCTCAC
CCATAACT---ACTTAACTGGTTCTTTCCCTACAAATGCAAGTTTCAATCTCCCGATGCTACAGATTATCGCCATAGGAC
AGAACAATTTCACAGGCCATGTTCCATTGGGCCTTGCGTCTTGTCAATACCTCAAAGTTATTTCCTTCTCCCTTAATTCA
TTTGAGGGTGTTGTGCCAACATGGCTAGGCAAGTTGACTCGTCTCATTTGGTTGGCCATGGGCGAGAATGGCCTTTTCGG
GTCAATCCCTAGCACGCTTAGCAACCTCACTTCGCTAGAGCTCCTTGACCTTGGATCCTGCAACCTAACAGGAGCCATTC
CAACAGAACTCGAACAGTTAAGTCAACTGTCACAATTGAATCTTTCGGAGAACGAGCTAATAGGACCCATTCCTGCTTCT
CTTGATAATGCAACTGAATTAGCAATCCTATTGTTGGACCAAAACATGTTGACTGGATCAATACCTGGATCTATCGGTAA
CATGAACTCTTTGATGATCCTTGATATTTCAACTAACTACCTACATGGGGATGTCAACTTCTTACCCGTTTTCTCTAATC
TTCCAAATCTCCAATACCTTAGCATCAAGTCAAATAATTTCACGGGTAGTCTCCCTAACAATGTAGGGAA----------
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>chr5D_1121
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---------------------------------------------GCAACGGCAGTGACACTGATCTCGCAGCGTTGCTG
GCTTTCAAAGCCAGCTTCTCCGACCCTGATGGTGTCCTTTCTAGCAACTGGACAAGCAGTGCATCGTTCTGCCACTGGGT
CGGTGTCTCGTGCAGTCAGCGCAGGCAGCGAGTCACTGCTATTGAGCTGCCAGGCGTACCACTCTATGGATCACTCGCTC
CTCACATTGGTAACCTCTCCTTCCTCTCTATCCTAAATCTCAACAACACCAACCTCACCAGCTCAATTCCAGACGACCTG
GGAAGATTGCACCGCCTAAAATTTCTATATCTTGGCTACAATGCCTTGTCAGGTAGCATCCCTCCTAGCATAGGAAACAT
GACAAGCCTTCAAGTTCTTTCCCTACGTCTTAACAATCTCTCGGGCACAATTCCAGCGCAGCTGCATAACCTACACAATG
CTGGGGCAAAATAAATCTCTATGCGAATCGCCTCACTGGCTCAATACCAACTAATTTATTCAACAATACTCATTTGTTAA
GTCATTTGGACATAGGCAACAACAGCTTGACAGGACCAATACCATCTTGCATTGGCTCCTTGACTATGCTGGAGTTCCTT
AACCTACAAGTCAATCATCTTGCTGGCCCAGTGCCCCAGGCAATCTTCAACATGTCTAAGCTACATATCATGTCTTTTGT
TGCCAACCTAAACCTAACTGGTTCTATCCCTAGCAATAAAAGTTTTAGACTCCCGATGCTGGAAGTAATTGCCATCGCTG
AAAACTATTTCACAGGTCACATTCCATTAGGGTTTGTATCTTGTCGGTACCTCCAAGTTATTTCACTAGACACTAATTCA
TTTGGGGGTGTTGTGCCAACATGGCTAGGCAAGCTGACTAATCTCAT---------------------------------
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>chr7A_2427
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----------------------CCCTCCCCCTCCCCCTCCCCCT-CCCCCTTCCCCGCGCCGCCCCTAGCGGGCGTCTCG
TGGGTTGATTCCCCTCCCGCCGGCGTAACCCCCCTCTCTCTCCATCTCTCCTCGCCGCCGCACGAGGCTGGCGCCGGGCC
ATGCCTGAGGCGCGGTCTGGGACTGCGGCGGCCGGGCCGGCTCCGCTTCGATCTGCATCGGAGGGTCTCGGATCCGGGCG
GCGGCCCCTGGCGAGGCTCCCTGTCTCCTGCGGCGGGCAGTGGGGTTGGCGTGGTGCCGGCGATCTGGTCGGGTGGCCGA
CGGATCTCCGGTGGCCTGGGGCCTCGCGTGGCTGCCTTGGCGGCTGGCGGCGCCAGATCTGGCTGCTGGCCTTCTTCTAT
GCTCGGTGCGCTTCTCCTGCGAGGGTCCCTGGGTGTGCTGTATGGCCTGCCTATGGGATGCGGGCGATTCTGGTGGTTGG
GATCCAGATCGGGGGAAACCCGGGTCAGCTCCGGCAGGCCGCGACGACGCCGACGCCCGCGGGCGCCGATTTCTTCATGG
AGACGTCTGTCAAGGTCTGC------CCTTCCACTCCCCACCACCTAGCTTCTCGGGTGAAAACCTAACTCTGGTGGGCA
GTGGCGGCGTCTTTGGCGCCGCGACCTTCTTGAAGGCGCTGCCTTGAGGGCTGGGTGGTGGCGGGCGCTGTTTGGGGACG
GTGACAGCTGCCGACGGCGTGCCCTTCTTCGCCCAAGCCTCCGC
>chrUn_2434
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-----------------------------CCTCCCCTCCCCCCGCCCCCCGCCCCCGCGCCGCCCCTAGCGGGCGTCTCG
GGGGGTGACTCCCCTCCCGCCGGCGTAACCTCCCTCTCTCTCCATATCTCCTCGCCGCCGCACGAGGCTGGCGCCGGGCC
ATGCCTGGGGCGCGGTCTGGGACTGCGGCGGCGGGGCCGGCTCCGCTCCGATCTGCATCGGAGGGTCTCGGATCCGGGCG
GCGGCCCCTGGCCAGGCTCCCTGTCTCCTGCGGCGGGCAGTGGGGTTGGCGTGGTGCCGGCGATCTGGTCGGGTGGCCGA
CGGATCTCCGGTGGCCTGGGGCCTCGCGTGGCTGCCTTGGCGGCTGGCGGCGCCAGATCTGGCTGCTGGCCTTCTTCCCT
GATCGGTGCGCTTCTCCTGCAAAGGTCCCTGGGTGTGCTGGATGGCCTGCCTATGAGATGCGGGCGATTTTGGTGGTCGG
GATCCAGATCGGGGGAAACCCGGGTCGGCTCCGGCCGGCCGCGACGACGACGACGCCCGCGGGCGTCGATTTCTTCATGG
AGACGTCTGTCAAGGTCTGC------CCTTCCACTCCCCACCACCTAGCTTCTCGGGTGAAAACCTAACTCCGGTGGGCG
TCGGCGGCGTCTTTGGCGCCACGACCTTCTTGAAGGCGCCGCTTTGAGGGCTGGGTGGTGGCGGGCGCTGTTTGGGGTCG
GTGACAGCTGCCGACGGCGTGCCCTTCTTCGCCCAAGCCTC---
>chr2B_2443
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--------------------------------------CCCCCGCCCCCCGCCCCCGCGCCGCCCCTAGCGGGCGTCTCG
GGGGGTGATTCCCCTCCCGCCGGCGTAACCTCCCTCTCTCTTCATCTCTCCTCGCCGCCGCACGAGGCTGGCGCCGGGCC
ATGCCTGGGGCGCGGTCTGGGACTGCGGCGGCGGGGTCGGCTCCGCTCCGATCTGCATCGGAGGGTCTCGGATCCGGGC-
GCGGCCCCTGGCGAGGCTCCCTGTCTCCTGCGGCGGGCAGTGGGGTGGGCGTGGTGCCGGCGATCTGGTCGGGTGGCCGA
CGGATCTCCGGTGGCCTGGGGCCTCGCGTGGCTGCCTTGGCGGCTGGCGACGCCAGATCTGGCTGCTGGCCTTCTTCCCT
GCTCGGTGCGCTTCTCCTGCGAAGGTCCCTGGGTGTGCTGGATGGCATGCCTATGGGATGCGGGCGATTTTGGTGGTCGG
GATCCAGATCGGGGGAAACCCGGGTCGGCTCCGGCCGGCCGCGACGACAACGACGTCCGCGGGCGCCGATTTCTTCATGG
AGACGTCTGTCAAGGTCTGC------CCTTTCACTCCCCACCACCTAGCTTCTCGGGTGAAAACCTAACTCCGGTGGGCG
GCGGCGGCGTCTTTGGCGCCGCGACCTTCTTGAAGGCACCGCCTTGAGGGCTGGGTGGTGGCGGGCGCTGTTTGGGGTCG
ATGACAGCTGCCGACGGCGTGCCCTTCTTCGCCCAAGCCTCCGC
>chr5A_2443
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--------------------------------------CCCCCTCCCCCCGCCCCCGCGCCGCCCCTAGCGGGCGTCTCG
GGGGGTGATTCCCCTCCCGCCGGCGTAACCTCCCTCTCTCTCCATCTCTCCTCGCCGCCGCGCGAGGCTGGCGCCGGGCC
ATGCCTGAGGCGCGGTCTGGGACTGCGGCGGCGGGGCCGACTCCGCTCCAATCTGCATCGGAGGGTCTCGGATCCGGGCG
GCGGCCCCTGGCGAGGCTCTCTGTCTCCTGCGGCGGGCAGTGGGGCTGGCGTGGTGCCGGCGATCTGGTCGGGTGGCCGA
CGGATCTCCGGTGGCCTGGGGCCTCGCGTGGCTGCCTTGGCGGCTGGCGGCGCCAGATCTGGCTGCTGGCCTTCTTCCCT
GCCCAGTGCGCTTCTCCTGCGAGGGTCCCTGGGTGTGCTGGATGGCCTGCCTATGGGATGCCGGCGATTTCGGTGGTCGG
GATCCAGATCGGGGGAAACCCGGGTCGGCTCCTGCCGGCCGCGACGACGACGACGCCCGCGGGCACCGATTTCTTCATGG
AGACATCTGTCAAGGTCTGC------CCTTCCACTCCCCACCACCTAGCTTCTCGGGTGAAAACCTAACTCCGGTG---G
GCGGCGGCGTCTTTGGCGCCGCGACCTTCTTGAAGGCGCCGCCTTGAGGGCTGGGTGGTGGCGGGCGCTGTTTGGGGTCG
GTGACAGCTGCCGACGGCGTGCCCTTCTTCGCCCAAGCCTCCGC
>chr5B_2445
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----------------------------------------CCCTCCCCCCGCCCCCGCGCCGCCCCTAGCGGGCATCTCG
GGGGGTGATTCCCCTCCCGCCGGCGTAACCTCCCTCTCTCCATCT-TCTCCTCGCCGCCGCACGAGGCTGGCGCCGGGCC
ATGCCTGGGGCGCGGTCTGGGACTGCGGCGGCGGGGCCGGCTCCGCTCCGATCTGCATCGGAGGGTCTTGGATTCGGGCG
GCGGCCCCTGGCGAGGCTCCCTGTCTCCTGCGGCGGGCAGTGGGGTGGGCGTGGTGCCGGCGATCTGCTCGGGTGGCCGA
CGGATCTCCGGTGGCCTGGGGCCTCGTGTGGCTGCCTTGGCGGCTGGCGGCGCCAAATCTGGCTGCTGGCCTTCTTCCCT
GCTCGGTGCACTTCTCCTGCGAAGGTCCCTGGGTGTGCTGGATGGCCTGCCTATGGGATGCGGGCGATTTTGGTGGTCGG
GATCCAGATCGGGGGAAACCCGGGTCGGCTCCGGCCGGCCGCGATGACGACGATGCCCGCGGGCGCCGATTTCTTCATGG
AGACGTCTGTCAAGGTCTGC------CCTTCCACTCCCCACCACCTAGCTTCTCGGGTGAAAACCTAACTCCGGTGGGCG
GCGGCGGCGTCTTTGGCGCCGCGACCTTCTTGAAGGCGCCGCCTTGAGGGCTGGGTGGTGGCGGGCGCTGTTTGGGGTCG
GTGATAGCTGCCGACGGCGTGCCCTTCTTCGCCCAAGCCTCCGC
>chr7B_2569
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----------------------------------------------------CTGCATCGGAGGGTCTTGGATCCGGGCG
GCGGCCCCTGGCGAGGCTCCCTGTCTCCTGCGGCGGGCAGTGGGGTGGGCGTGGTGCCGGAGATCTGGTCGGGTGGCCGA
CGGATCTCCGGTGGCCTGGGGCCTCGCGTGGCTGCCTTGGCGGCTGGCGGCGCCAGATCTGGCTGCTGGCCTTCTTCCCT
GCTCAGTGCACTTCTCCTGCGAAGGTCCCTGGGTGTGCTGGATGGCCTGCCTATGGGATGCGGGCGATTTTGGTGGTCAG
GATCCAGATCGGGGGAAACTCGGGTCGGCTCCGGCCGGCCGCGACGACGACGACG-CCGCGGGCGCCGATTTCTTCATGG
AGACGTCTGTCAAGGTCTGC------CCTTCCACTCCTCACCACCTAGCTTCTCGGGTGAAAACCTAACTCCGGTGGGCG
GCGGCGGCGTCTTTGGCGCCGCGACCTTCTTGAAGGCGCCGCCTTGAGGGCTGGGTGGTGGCGGGCGCTGTTTGGGGTCG
GTGACAGCTGCCGATGGCGTGCCCATCTTCGCCCAAGCCTCCGC
>chr7B_2569
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----------------------------------------------------CTGCATCGGAGGGTCTTGGATCCGGGCG
GCGGCCCCTGGCGAGGCTCCCTGTCTGCTGCGGCGGGCAGTGGGGTGGGCGTGGTGCCGGCGATCTGGTCGGGTGGCCGA
CGGATCTCCGGTGGCCTGGGGCCTCGCGTGGCTGCCTTGGCGGCTGGCGGCGCCAGATCTGGCTGCTGGCCTTCTTCCCT
GCTCGGTATACTTCTCCTGCGAAGGTTCCTGGGTGTGCTGGATGGCCTGCCTATGGGATGCGGGCGATTTTGGTGGTCGG
GATCCAGATCGGGGGAAACCTGGGTCGGCTCCGGCTGGCCGCGACGACGACGACGCCCGCGGGCGCCGATTTCTTTATGG
AGACGTCTGTCAAGGTCTGC------CCTTCCACTCCCCACCACCTAGCTTCTCGGGTGAAAACCTAACTCCGGTGGGCG
GCGGCGGCGTCTTTGGCGCCGCGACCTTCTTGAAGGCGCCGCCTTGAGGGCTGGGTGGTGGCGGGCGCTGTTTGGGGTCG
GTGACAGCTGCCGACGGCGTGCCCTTCTTCGCCCAAGCCTCCGC
>chr2B_2575
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----------------------------------------------------------CGGAGGGTCTTGGATCCGGGCG
GCGGCCCATGGCGAGGCTCCCTGTCTCCTGCGGCGGGCAGTGGGGTGGGCGTGGTGCCGGCGATCTGGTCGGGTGGCCGA
CGGATCTCCGGTGGCCTGGGGCCTCGCGTGGCTGCCTTGGCGGCTGGCGGCGCCAGATCTGGCTGCTGGCCTTCTTCCCT
GCTCGGTGCACTTCTCCTGCGAAGGTTCCTGGGTGTGCTGGATGGCCTGCCTATGGGATGCGGGCGATTTTGGTGGTCGG
GATCCAGATCGGGGGAAACCTGGGCCGGCTTCGGCTGGCCGCGACGACGACGACGCCCGCGGGCGCCGATTTCTTCATGG
AGACGTCTGTCAAGGTCTGC------CCTTCCACTCCCCACCACCTAGCTTCTCGGGTGAAAACCTAACTCCGGTGGGCG
GCGGCGGCGTCTTTGGCGCCGCGACCTTCTTGAAGGCGCCGCCTTGAGGGCTGGGTGGTGGCGGGCGCTGTTTGGGGTCG
GTGACAGCTGCCGACGGCGTGCCCTTCTTCGCCCAAGCCTCCGC
>chr6A_2575
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----------------------------------------------------------CGGAGGGTCTCGGATCCGGGCG
GCGGCCCCTGGCGAGGCTCCCTGTCTCCTGCGGCGGGCAGTGGGGTTGTCATGGTGCCGGCGATCTGGTCGGGTGGCCGA
CGGATCTCCGGTGGCCTGGGGCCTCGCGTGGCTGCCTTGGCGGCTGGCGGCGCCAGATCTGGATGCTGACCTTCTTCCCT
GATCGGTGCGCTTCTCCTGCGAGGGTCCCTAGGTGTGCTGGATGGCCTGCCTATGGGATGCGGGCGATTTTGGTGGTCGG
GATCCAGATCGGGGGAAACCCGGGTCGGCTCCGGCCGGCCGCGACGACGACGACGCCCGCGGGCGCCGATTTCTTCATGG
AGACGTCTGTCAAGGTCTGC------CCTTCCACTCCCCACCACCAAGCTTCTCGGGTGAAAACCTAACTCCGGTGGGCG
GCGGCGGCGTCTTTGGCGCCGCGACCTTCTTGAAGGCGCCGCTTTGAGGGCTGGGTGGTGGCGGGCGCTGTTTGGGGTCG
GTGTCAGCTGCCGACGGCGTGCCCTTTTCCGCCCAAGCCTCCGC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------S----------S---S-S
-------S-----------S----------------------------------SS------S----S-----S-S----
-------S-----S-----------S------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------
--------------S----S---SS-----------S-------------------------------------------
-----S---S-SSSSSSSS-------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------S-
---S----------------------------------------------------------------------------
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--------------------------------------------------------------------S-----------
-S----------------------S--SS----------------------------------------S----------
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---------------------------------------------------------S-----SSSS-------------
----------------------------------------SS--------------------------------------
-S----------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------S-S------------------------
--------------------------------------------------------------------------------
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------------------------------------S------------------------S--S---------------
--------------------------------------------------------------------------------
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--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
------S--------------------------------------------S----------------------------
-------------------------------------------------------------------------S------
------------------------------------------------------------S-----S-------------
---------------S------------------------------------------------------------S---
-------------------------------------------------S--------------------SSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS-----S---------S-----------------------------------S------
--------------------------------------------------------------------------------
----------S---------------------------------------------SS---S------------------
------------------------------------------------------------------S---------S---
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
--------------------SSSSSS-----S------------------------------------------------
-----S--------------------------------------------S-----------------------------
-----------------------------S--------------
>forward_4882
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--------------------------------------------------------------ACGAGATATGCCCCACTC
CT------------------------------------------------------------------------------
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>reverse_6794
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-------------------------------------------------------------------------CAAGCTA
CTGCCGGAGACTG-------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------
