>input_sequence_60123
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-----------------------------------------------ATGAGGATTACGGGGTGCGGAAGCAAAGCTCGC
AGGAGGAAA---GAGGAGGCAGCTCAGGCAAGTTAACTTTCGGTTCAATCTTGGGTGCTTCCCCTGATCTAC-AGGAGTA
CAGACCAATTCTTCGTCTCCCCTCAAAAAACTAAATCTTCCAAGTCTCGG--TAACCGAAGCAACTAACCCGCCAAATTA
CACCGCGGATCGCTCTCCACTTGGTCTTGACGTCCC------------CTCGCGCCATCCTGCCTATTCTTTCGCTCCTC
CCCTCACGCCATCATGCACATCCTCATCTTTCG-TACTCCCTCCCCCTATAAACCATGGCTCAGCTCTGCAC--ATCCAC
GTCGCGCCCGCAAACAGTGTAG-TGATCAGTCGCAAGCCATACCCAGTGTTCAC-TAAATTTTGATCAATCGATGGCTCA
GCTGTTCAGCTTCTTCTTCGTACTACTCATCGCTGCTGCCGAGTCCGTGCAGGGCGCTGGCGCTGGTGTTGGGCTCGTTC
CGCCGGTTCCAATTGGTAAGAGGTACATCGTCGGT--------GGCGCGGACGGGTGGCGCGTGCCGCCGAAGGAGAATA
AGGACATGTACATCAAGTGGGCCTCCAGCATTCAGTTCTTTGTCGAGGACTCTATTGGTAAGGAGGACTAACTAGCAAAA
AAGAAAAACCGATTAATCTACCTGCGTGCATTTTG--TTTTTATTAATCGATATGAACTCTCGTTCGTTTTCGTTTTCTG
AAGAATTCATGTACAAGAACGACTCGGTCGGGAAGGTGAACAAGTACGCGTACTACCACTGCAACTGGACGACACTGGCC
CCGACACCGCCCGTCAAGGACGGCAGCTCGCTCTTCCTCTTAGACGCCCCGGGGTTTGCCTACTTCGCGAGCGCCGACGT
CAAGCACTGCAAGAAGGGCCAGCGCCTCATGCTCAACGTCAAGGCCCT-GCCAGCGCCGGTTCCGTCAACTGATATTTCA
AGCCCTCCTAGCCCTGCTCCGCCTGCGATTGCACCTGGACCGGCCCC---TGGAGAGCCCGTAATGGACAGCGGCACCGC
AGTAGTGGCCTCGTCACATGGGCG-CGCCTTGATGTTGGTGGTTTCTAGCACAACACTTGCATTGATGGGGACGATTCGG
GCCTGA--------------------------------------------------------------------------
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>chr7D_1_TraesCS7D01G367400
AAGAAAGAATTATCACGAGACCGAATGAATCGGGACGCTACACCCTCTGTACAGCTTCTTAAATTTCATACAGTAT----
GAACTGCCGTAACGAGTTCCTCTATCCGCCACACGGAGCCCCGTCCTCGACCTGCATGTCCACCGCGTCGTTCTCCTCGT
GCATGTACGCCGACAGGTTCATGTACTGCTGCTGGTCCTGCTCCCGGTCCCGGCTCGGCTTCCGCCACCTCGCGCGGCAC
ACGACGCACGTCGCCGCCCGCCGCGCCCGGCTGCGCTTCCACCGCGCGAAGCACTCGGCGTGCACCGAGTTCCGGCACGT
GCCGCACGTCAGCAGCGGCGCCGGCCCCGTTGCCGCCGCGCCGCCTTGTGCCTCTGCCGAC---GGCGCCATCTCCTCGA
GGCACACCGGGCATGCGGCGCCGTCGAGGCGGCCCGACGACGGGCCGGCGGAATCCTGCCGGCGCTGGTCGGCGGCCTTT
GCGGCTGCGGCCGCCACGTGGGCCGCCCACAGCTGGTGGAACCTCTCCCGGGCGCGAGGGCCGGCGAGCACCTCCGGGTA
AGTCGGCGCGGCGACGAGCCGAGCGACCTGGCACGGCCGCAGCGACTGCCTCCACACGCAGGCCTCGTCGAGGGACAGGC
CGAGGACGCGGAGCAGCACGAAGAGGATGTGCTTGCAGGGCGCGCCGGGGTCGGGGCACGTGCACGCCGGCGTGGTCGCC
AGCGTCACCGTGTACACGTTGCCCGTGGCGCCCAGCACGAAGAAGTCCGCGCCGGCGCGGTGCAGCAGCAGGAGGTGGTG
CTGCAGCGCGCGGATGATGCGGTTGGCCACGCGCCGGGTCGACGCCTCCTCGGTGGTCGCGGAGTTGGACCCGAACGACG
GCTCCATCGGCAGGTCGCTCCGCGTTTCTGGCATGGGAGCTGGCGAGAGCCCGGGGGCGAGCGGCTATGTAAGGCCGGGG
CGCCATGCCATGAGATGCGTTGAGTGCCGTGGGAGAAGACTGCGGCGATGAGGATTACGGGGTGCGGAAGCAAAGCTCGC
AGGAGGAAA---GAGGAGGCAGCTCAGGCAAGTTAACTTTCGGTTCAATCTTGGGTGCTTCCCCTGATCTAC-AGGAGTA
CAGACCAATTCTTCGTCTCCCCTCAAAAAACTAAATCTTCCAAGTCTCGG--TAACCGAAGCAACTAACCCGCCAAATTA
CACCGCGGATCGCTCTCCACTTGGTCTTGACGTCCC------------CTCGCGCCATCCTGCCTATTCTTTCGCTCCTC
CCCTCACGCCATCATGCACATCCTCATCTTTCG-TACTCCCTCCCCCTATAAACCATGGCTCAGCTCTGCAC--ATCCAC
GTCGCGCCCGCAAACAGTGTAG-TGATCAGTCGCAAGCCATACCCAGTGTTCAC-TAAATTTTGATCAATCGATGGCTCA
GCTGTTCAGCTTCTTCTTCGTACTACTCATCGCTGCTGCCGAGTCCGTGCAGGGCGCTGGCGCTGGTGTTGGGCTCGTTC
CGCCGGTTCCAATTGGTAAGAGGTACATCGTCGGT--------GGCGCGGACGGGTGGCGCGTGCCGCCGAAGGAGAATA
AGGACATGTACATCAAGTGGGCCTCCAGCATTCAGTTCTTTGTCGAGGACTCTATTGGTAAGGAGGACTAACTAGCAAAA
AAGAAAAACCGATTAATCTACCTGCGTGCATTTTG--TTTTTATTAATCGATATGAACTCTCGTTCGTTTTCGTTTTCTG
AAGAATTCATGTACAAGAACGACTCGGTCGGGAAGGTGAACAAGTACGCGTACTACCACTGCAACTGGACGACACTGGCC
CCGACACCGCCCGTCAAGGACGGCAGCTCGCTCTTCCTCTTAGACGCCCCGGGGTTTGCCTACTTCGCGAGCGCCGACGT
CAAGCACTGCAAGAAGGGCCAGCGCCTCATGCTCAACGTCAAGGCCCT-GCCAGCGCCGGTTCCGTCAACTGATATTTCA
AGCCCTCCTAGCCCTGCTCCGCCTGCGATTGCACCTGGACCGGCCCC---TGGAGAGCCCGTAATGGACAGCGGCACCGC
AGTAGTGGCCTCGTCACATGGGCG-CGCCTTGATGTTGGTGGTTTCTAGCACAACACTTGCATTGATGGGGACGATTCGG
GCCTGAATGCGTGCGTGAGACACAATGCGGCGTGGCATTGTAGGTCGTCTAGTTCAGATTCTTTAGCATGGTTAATTTCT
TAGTTGCAGATCGAGCCGTACGGTATGATAGTTAGAGAATGTGTGCAGTTTGAGTTTCTTATTGGTGAACACAATAAATA
TTTTTCAAGACAATTATTG--CTTGCTCCAGAGTAAAAGAAATTACATCAG-------------CCGTTTCTTGCAATAC
GGTGTAGATAGTCTCTGATTATTGAGTTGATTTTGTTTCTATATGCACTAGAAGACGGCCAAACAAGATTATCAAAGTAT
ATCTTGCAAAAGAAAAAATCATTGCGCC------AAGGGAAAATATTGTTGAAATTAGCCAAATTAACAATTGAGGAGGT
CTTAGCAAGGGGCGGGATTACCTCCCAAAAAAAATCATTGAAGCATAAGCAAAATTGGCTAGCCATTGGCACGGGCCGTT
AGCATATAGGTCTTTTTCTATGTTTTAGAATATCTTACAAACCACTTCAAAAAAATAAAGATAGTGACCACTTTAATAAA
AATATATATTAGATCCTACTTTGACTAATCAAAGATTGTTTCTTATCTTTTGTTCATACAACTGATGAGATTTATTCACA
ATATACTAAATAGAAAATTATGTCACTAGAGAACAATATCCCGCGAGATAAAACAAGCAA-GGTTTTTTAGATTGTTTTG
TGTTACAGTTAGAACTATGTTTCATTTTGGTTTGAAAATATATCTATTTCAAAATAAACGTCTATGACTATAATAACGAT
TCCACATATCTCAAAATAGGTGTTGATGCATTTAGAAAATCATATGTATGAAATCAAATGTCTTGAGCTAAAAAATCTAA
CGTAGTTAAAAAAGTTCATGTGTAACTGTACAAAGATTAATAAAATACATAAATAACGACGGTCAAAAAACAAGGTGATT
TAAAGCAAAAATAGTAAGAATAAAAAAACATGAAGTAAAAAAAAGGAAAATGAAAAGATAAACAAAAA
>chr7B_1
AAGAAAGAAATGTCACGAGTCCGAATGAATTGGGATGCTACTCCCTCTGTACAGCTTCTTAAATTTCATACAGTAT--AT
GAACCGCCGTAACAAGTTCCTCTATCCGCCACACGGAGCCCCGTCCTCGACCTGCATGTCCACCACGTCGTTCTCCTCGT
TCATGTACGCCGACAGGTTCATGTACTGCTGCTGGTCCTGCTCCCGGTCCCGGCTCGGCTTCCGCCACCTCGCGCGGCAC
ACGACGCACGTCGCCGCCCGCCTCGCGCGGCTGCGCTTCCACCGCGCGAAGCACTCGGCGTGCACCGAGTTCCGGCAGGT
GCCGCACGTCAGCAGCGGCGCCGGCCCCGTTGCCGCCGCGCCGCCTTGTGCCTCTGCCGAC---GGCGCCATCTCCTCGA
GGCACACCGGGCAGGCGGCGCCGTCGAGGCGGCCCAACGACGGACCGGCGGACTCCTGCCGGCGCTGGTCAGCGGCCTTT
GCGGCTGCAGCCGCCGCGTGGGCCGCCCACTGCTGGTGGAACCTCTCCCGGGCGCGAGGGCCGGCGAGCACCTCCGGGTA
CGTGGGCGCGGCGACGAGCCGCGCGACCTGGCACGGCCGCAGCGACTGCCTCCACACGCAGGCCTCGTCGAGGGACAGGC
CGAGGACGCGGAGCAGCACGAAGAGGATGTGCTTGCAGGGCGCGCCGGGGTCGGGGCACGTGCACGCCGGCGTGGTCGCC
AGCGTCACCGTGTACACGTTGCCCGTGGCGCCCAGCACGAAGAAGTCCGCGCCGGCGCGGTGCAGCAGCTGGAGGTGGTG
CTGCAGCGCGCGGATGATGCGGTTGGCCACGCGCCGGGTCGACGCCTCCTCGGTGCTCGCGGAGTTGGACCCGAACGACG
GCTCCATCGGCAGGTCGTTCCGCGTTTCTGGCATGGGATTTGGCGAGAGCCCGCGGGCGAGCGGCTATGTAAGGCCGGGG
CGCCATGCCATAAGATGCGTTGAGTGCCGTGGGAGAAGACTGCAGCGATGAGGATTACGGGGGGAGGAAGCAAAGCTCGC
AGGAGGAAA---GAGGAGGCAGCTCCGTCAAGTTAACTTTCGTTTCAATCTTGGGTGCCTGATCTGCAGG---AGTACTA
CAGACCATTTCTTCCGAGTCTCCGCTAAAGAAAATTCTTCCGGTGACAGGGTTAACCGAAGCAACGAAACCGCCAAAGTC
CACCGCGGATCGGTCTCCACTTGATCTCGACGTAACAAACTAAGCCCGCTCGCGCCATCCTGCCTATTCTTTCGCTCATC
CGCTCACA-----------ATCCTCTTCTTTCGCTACTCCCTCACCCTATAAACCATGACGCCGTTGTGCAC--ATCCAC
GTCGTGCCCGCAAACATTGTAG-TAATCAGTCATAAGCCACCA--AGTGTTCAT-TAAGTTCTGATTGATCGATGGCTCA
GCTGCTCACTTTCTTCTTCTTCCTACTCGTCACTGTTGCCGAGTCCGTGCGGGGCGCTGGCGCGGGTGTCGGGCTCGTTC
CGCCGGTGCCGATCGGTAAGAGGTACATCGTCGGCGCT--------GCGGACGGGTGGCGCGTGCCGCCGCAGGAGAACA
AGGACATGTACATCAAGTGGGCCTCCACCATTCAGTTCTTCGTCGAGGACTCCATTGGTAAGGAAGACTAACTAGGCAAA
AAGAAACT--GATTAATCTACCTGCGTGCATTTCGTTTTTTTATTAATCGTTAAAAACTCCAGTTTGTTTCCATTTTCTG
AAGAATTCATGTACAAGAACGACTCAGTCGGGGAGGTGAACAAGTACGCGTACTACCACTGCAACTGGACGGCACTGGCC
CCGACACCGCCCGTCAAGGACGGTAGCTCGCTCTTCCTCTTAGACGCCCCGGGGTTTGCCTACTTCGCGAGCGCCGACGT
CAAGCACTGCAAGAAGGGCCAGCGCCTCATGCTCAACGTCAAGGCTAG-GTCAGCGCCAGTTCCGTCAACTGATATTTCA
AGCCCTCCTAGCCCTGCGTCGCCTGCGATTGCACCTGGACCGGCCCC---TGGAGAGCCGGTAATGGACAGCGCCACCGC
AGCACTAGCCTCGTCACATGGGCG-CGCCTTCATGTTGGTGGTTTCTGGCACAACACTTGCATTGATGGGGACGATTCGG
GCCTGAATGCATGCGTGACACACAATGCGGCTTGGCATTGTAGGTCGTCTAGTTTAGATTCTTTGACATGGTTAATTTCT
TAGTCGCACATCGAGCCGTACAGTATGGTAGTTAGAGAATGTGTGCAGTTTGAGTTTCTTATTGGTGAACACAATAAATA
TTTTTCACGACAATTATTG--CTTGCTCCAGAGTAAAAGAAATTACATC-------------GTCCGTTTCTTGCAATAC
GGTGTAGATAGTCTCTGATTACTGAGTTGATTTTGTTTCTATATGCACTAGAAGACGGCCAAACAAGATTACCAAAGTAT
TTCTTGCAAAAGAAAAAATCATTGCGCCAAAAAAAAGGAAAAATATTACTCAAATTAGCCAAATTAAC-ATTGAGGAGGT
CTTAGCGAAGGGCGGGATTACCTCCCAATAAAATCG-TTGAAGCATAAGCAAAATTGGCTAGCCATTGGCACGGGCTATT
AGCATATAGGTCTTTTTCTGTTTTCTAGAATATCTTACATACCACTTAAAATAAATA--------------------AAA
AATATATATTAGATCCTACTTTGACTAATCAAAGATTGTTTCTTATCTTTTGTTCATACAACTGATGAGATTTATTCACA
ATATACTAAATAGAAAATTATGTCACTAGAGAACAATATCCCGCGAGATAAAGCAAGCAAAGGTTTTTTAGATTGTTTTG
TGTTACAACTAGAACTATGTTTCATTTCGGTTTCAAAATACATCTATTTCAAAACAAACATCCATGACTATAATAAAGAT
TCCACATATCTCAAAATAGGTG--GATGCATTTAGAAAATCATATGTATGAAATCAAATGTCACGAGCTAAAAAATCTAA
CGTACTTAAAAAAGTTCATGTACAACTGTACAAACAATAATAAAAAATATAAATAACGACAGTCAAAAACCAAGGTGATT
TAAAGCAAAAATAGTAAGAATAAATAAACATGAAGTAAAAAAAGGGAAAATGGGAAAATAAACAAAAA
>chr7A_1
AAGAAAGAATTGTCACGAGACCGAATGAATCGGGAAGCTACTCCCTCTGTACAGCTTCTTAGATTTCATACAGTATCTAT
GAACTGCCGTAGCAAGTTCCTCTATCCGCCACAGGGAGCTCCGTCCTCGACCTGCATGTCCGCCACGTCGTTCCCCTCGT
TCATGTACGCCGACAGGTTCAGGTACTGCTGCTGGTCCTGCTCCCGGTCCCGGCTCGGCTTCCGCCACCTCGCGCGGCAC
ACGACGCACGTCGCCGCCCGCCTCGCGCGGCTGCGCTTCCACCGCGCGAAGCACTCGGCGTGCACCGAGTTCCGGCACGT
GCCGCACGTCAGCAGCGGC------------GCCGCCGCGCCGCCTTGTGCCTCTGCCGCCGGAGGCGCCATCTCCTCGA
GGCACACCGGGCAGGCGGCGCCGTCGAGGCGCCCCGACGGCGGCGCGGCGGACTCCTGCCGGCGCTGGTCGGCGGCCTTG
GCGGCCGCGGCCGCCGCGTGAGCCGACCACAGCTGGTGGAACCTCGCCCGGGCGCGAGGGCCGGCGAGCACCTCCGGGTA
AGTCGGCGCGGCGACGAGCCGCGCGACCTGGCACGGCCGCAGCGATTGCCTCCACACGCAGGCCTCGTCGAGGGACAGGC
CGAGGACGCGGAGCAGCACGAAGAGGATGTGCTTGCAGGGCGCGCCGGGGTCGGGGCACGTGCACGCCGGCGTGGTCGCC
AGGGTCACCGTGTACACGTTGCCCGTGGCGCCCAGCACGAAGAAGTCGGCGCCGGCGCGGTGCAGCAGCAGGAGGTGGTG
CTGCAGCGCGCGGATGATGCGGTTGGCGACGCGCCGCGTCGACGCCTCCTCGGTGCCCGCCGAGCTGGACCCAAACGACG
GCTCCATGGACACGTCT---CGCGTTTCTGGCATGGGAT--GGCGGGAGCCCGGGGGCGCGCGGCTATGTAAGGCCGGGG
CGCCATGCCATGAGATGCGTTGAGTGCCGTGGGAGAAGACTGCGGCGATGGGGATTACGGGGGCCGGAAGCAAAGCTCAC
ACGAGGGAAGAGGAGGAGGCAGCTCCGGCAAGTTAACTTTGGGCTCAATCTTGGGCACCTGACCTGCAGCTGTAGGAGTA
CAGACCAATTCTTC------------------------------------------------------------------
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>chr7A_1292
TCCGCT--------------------------------------------------------------------------
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------------------------------------------CCTCCTATAAGCCAAGGCACCACTCATGCACAATCCAC
ATCACGCCGGCAAGCAGTGTATTTGATTAGTCACAAGCCATAATCAGTTTTTTTCTAAGTTCTGATCCATCAATGGCTCA
TCCACTCAACTTCTTCTTCCTCCTGTTCGTCTCCGCTGTTGTATCTGTGCGTGGTGCTGGCC------TTGGGCTTGTTT
TGCCGGTGCCTATCGGTAAGAGGTACATCGTCGGCGCCTCGGCGGGGCGGACGGGTGGCACGTGCCACCACGGGAGAACA
AGGACCTGTACTTGAAGTGGGCCTCCACCATTGAGTTCTTCGTTGAGGACTCCATTGGTAAGAAGGACCAACTAAGAAAA
GAAGTA-T--GATCGATCAAGCTGCATGCATTTTG--TTTCATCGAT--------AACTCTCGTTCTTTC-----TTGTG
AAAAATTCATGTACAAGAACGACTCAGTCGGAAAGGTGAACAAGTACGCGTACTACCACTGCAACTGGACGACACCGACC
TCCGCACTGCCCGCCAAGGATGGCAGCTCACTCTTCCTCCTCGACGCCCCCGGCATCGCGTACTTCGCCAGCGCCGACAT
CAAACATTGCAAGAAGGGCCAGCGCCTCATGCTCAACGTCAAAGGGCAGGCCAACCCTGGCTCCGTCAGCTGATATTTCA
AGCCCTCCTGCCCCTGTGTCGCCCACACCTGCACCGGGACCGGCGGTGCTTGGAGAGCCGGTAATGGACAGCGGTGCCAC
AACACTGGCCTCGTCGGTCTAGTCACGCCTTGGCGCTGGTGGTTTCTGTCACAACACTTGCCTTGATGGGGAGGATGAGG
ACCTGAATGCCCGC----GACACGATGAGGCGCAGCATTGTAGGTGC-CTAGTTCAGATTCTCTCGCGTGGTTAATTTCT
TAATCGCGGGCCGAACCGTTCGGCATGGTAGTGAGAGTGTGTGTTGTGTGAGTATT--TTATCGGTCGACACAATAAATA
TTTTTGACGACCATTATTGATCTTGCTGCAGAATGAAAGAAATTAACTTCTGTATTTTATCGGTCGTTTTCTTGCAATAT
TGTGCAGATAGTCTCTAACTTCTGTGTTGATTCTGTTTCTATATGCACAAGAATACGACCAAACTAGATCACCAAAGTAT
TTCTTGCGAAA--AAAAATCATTGCGCC------AAGGAAAAATACTGTTGAAATTAGCTGAATTAACGATT--------
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>SNPs
-----------S-----------------------S-----S--------------------------------------
-------------S--------------------------------------------------S---------------
S-------------------------------------------------------------------------------
----------------------S---S-----------------------------------------------------
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-------------S-----------------------------S--------S---------------------------
---------------S----------------------------------------------------------------
---------------------S----------------------------------------------------------
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-------------------------------------------------------S------------------------
-----------------S--------------------SS----------------------------------------
--------------------------------------------------------------S-----------------
-------------------------S--------------------------------S-SS----SSSSSS--------
--------------SSSSS-S-SSSS---SSS--S------SSSSSSS-----------------S--S--------S-S
------------S----------S---S-----SS------------------------------------------S--
-S-----SSSSSSSSSSSS------S----------------------------------S-S-----------------
--------------------------------S---------SS---------S----S--S-----S------------
----S---S----------S-S------S--S------------------S------------S----------------
-------S--S--S--------------------S----------S------------------------S-------S-
---------------------------S------------S-----------S----------------------S----
------SSSS----------------------------------------S--SS---------------S-S-------
-------------------------S------------------------------------------------------
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---------------------------------------------S-S--------------------------------
-----------------SS----------------------------------------S--------------------
--S-S------------------------------------------S--------------------------------
----------S-----------------------------------------------------S---------------
----S----------------------S----------------------------------------------------
-------S-----------------------------------------SS-----------------------------
---------------------S-------------------------------------------------S--------
S-------------------------------------S-----------------------------S-----------
------S-S-------------------S----SSSS---------------------------------------SS--
-------------------S-S--S--------------S-------S---S-----SSSSSSSSSSSSSSSSSSSS---
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----------------------------------------------------S---------------------------
-------SS------------------S-----S------S-------------S----S--S-------------S---
----------------------SS--------------------------------------SS----------------
----S----------------SS-----------S-S--------S-S------------S--------S----------
------------------------S------------------S--------SS--S-----------
>forward_919
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--------------------CGCGTTTCTGGCATGGGAG-----------------------------------------
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>reverse_1786
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-------------------------GGTCGGGAAGGTGAACAAGT-----------------------------------
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>forward_1449
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---------------------------------------------------------------------TCGATGGCTCA
GCTGTTCAG-----------------------------------------------------------------------
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>reverse_2567
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------AAGGGGCGGGATTACCTCC-------------------------------------------------------
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