>input_sequence_60092
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-------------------------------------------ATGAAGCTTCTTCCGGCCGCCCTCGGCCTCGTCGTC-
--CTCCTCATCCTCGTTCTAAATCTCAATAGTGTGGAGGCCCGGCCAGCCCCTGCCGGCGGCCATCAGAACAAGTCGTCC
AGCAACACCTTCTTCGTCTTCGGGGACGACTTCGCCGACAACGGGAACC----TCCCACCGAACCC----GTCACCAAGA
TGTCGCGGCAATGGGCCTACCCCTACGGCTCCGTGTATACCGATGCCCATGGGTTTCCGCGACCAAATACTCCGTCTGGC
CGCTTCTCCAACTGCAAAATCCAGTCAGATTTCATTGGTAAGGC--ACTACCTTATATTACCACAAAAAAA-GTACTGTT
AT------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------------AT
TATGCAAGCACGAGCGTGATTGGCC-------------------------TAAGTAGCCCCAGTGATGTGAGTATCATAT
CAACGGAGAATGTATATATATCCATAC-------------ACTAATTTGTTTGTGCATCTTACTAACTTAA---TTTC-A
TGTATGTGATGCAGATTAATGCTTATATTGGAAAGGTGACAAAAGAGGTTGCGGCTAATGTGGAGCAATTGTTGAAGCTC
GGGGTGAAAAAAGTTCTTGTCAACAACTTGCACCCTATCGGTTGCACGCCGTCACAAACCCGAACCAATAACTACACCGC
GTGCGATATTTT-TGGAAATTTGGGTGCATCAATTCACAACGATAACCTGAAACAAGTCATGACAGTAAAGAAGAATGTC
CAGATCATCGACCTATACACCTCATTTACTAGTATTGTGGATCATGCGCCAGGTATGTATGTATTTTTCATGCAAAGTGT
CTCATTATTTTAGAAGTTCCTAACA-TAATTAGATGG--A-GTTTGATTGTGTGCTTGTACTACTTCTTATGAAC-TTTT
TTATTTTTATCTACATTAAT-GTAGGTAAAGGCTCGGATCTATCTAAGCAATTCAAGCGCAAACTGTCGCCCTGTTGCGA
GAGTTTGGATTCGAATGGCTATTGCGGACAACAAGGCGAGTCGTCCTCAGAGCTTCTATACACCGTGTGCGACAAGTCCG
ACAAATTTTTCTATTGGGACGACATGCACCCCACACATGCAGGATGGGAGGCTATCATGAAACAGTTGGAAAAGCCCTTG
AAGGAGTTTGTAGATCAAGAGTAG--------------------------------------------------------
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-----------------
>chr5D_1_TraesCS5D01G424800
AATAGCTCACCAAGAAAGGTGCCCAATCAGAACAGTCACATTTGGAACTACTGGGCAAGATACAACACGTTGAATGATGC
AAACAAATTACGCAATAACAAGATTCCAGAAANNNNNNNNNN-----------------AACAAATAAACGAACCATAAA
AAGGACACCTGGAACAGTTTTCCCTACTACAGCAATGGTGGATGTATCTGAATATGGTTGATGAGTTATTTTGTTT----
---ATAGCACACATCGATATGATGTACTCCCTCCGTTTCATAATATATAAGAGCGTATTTTACACTACGCTAGTGTCAAA
AACGAACGCAACA-------------CCTTAACTT------ATCAAATTCAGAAAAGTTCAGTACAAGACACGCGGCAAC
CGGAAGAACAAACCAGGAAAATCAGGAAGATCCAAGTGCCCGACACAACACCGAGG----------------C-------
-----------CAAGATGGCCGAAGGAGAAGAAGCTCCAACGCGCCCCCAGCCGGTTAAGCATCCTCGCTGTCCGATGCA
GCCCGCTGCGAAAGGCTGGCCCTTCCTGATGCAGTACCGA---------------------GGTGACGAGCGACATCAAC
GACGGAGAACACAAGCTACGCTGATTCCGGAAGAACTTCGCCAACGCCATCAAAGACGGCACCCACCGGCAAATTATTTA
CAT------------------------CTACTGCAGCGTCAAGGTGCGCAGCCACTGCAGCGTCGTAAGCGAGAGGCTCC
ATTGGTCCCTCCGTGACGTAACTTTTGAGATGAAGAGCGGTTGGCGCCTGCTGGATGAACGACGTCAGCTCCAGCCTCCA
TGACGCATA------TCCGTGTCCGACCTCCGACGATGCTGGGGCTCCGACTCCG----ATCGAGGTA-------GCAGG
CCCGATTTCGACTTGTTTTCCTGCTGGTCCATAGCAGTAGTTCTATAAATTGAAGCGAGAGGGTCAGGCCATGGCGTACG
TGCATCGCAGACAAGCCCTTTGTG-TCCCTGATTTTCATCGGCGAAAGAGTAGCGGT-----------------------
TAGCAGCCGCAGAAACCAGCCGTTCTCGTACGACCCTTCCACGATGAAGCTTCTTCCGGCCGCCCTCGGCCTCGTCGTC-
--CTCCTCATCCTCGTTCTAAATCTCAATAGTGTGGAGGCCCGGCCAGCCCCTGCCGGCGGCCATCAGAACAAGTCGTCC
AGCAACACCTTCTTCGTCTTCGGGGACGACTTCGCCGACAACGGGAACC----TCCCACCGAACCC----GTCACCAAGA
TGTCGCGGCAATGGGCCTACCCCTACGGCTCCGTGTATACCGATGCCCATGGGTTTCCGCGACCAAATACTCCGTCTGGC
CGCTTCTCCAACTGCAAAATCCAGTCAGATTTCATTGGTAAGGC--ACTACCTTATATTACCACAAAAAAA-GTACTGTT
AT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AT
TATGCAAGCACGAGCGTGATTGGCC-------------------------TAAGTAGCCCCAGTGATGTGAGTATCATAT
CAACGGAGAATGTATATATATCCATAC-------------ACTAATTTGTTTGTGCATCTTACTAACTTAA---TTTC-A
TGTATGTGATGCAGATTAATGCTTATATTGGAAAGGTGACAAAAGAGGTTGCGGCTAATGTGGAGCAATTGTTGAAGCTC
GGGGTGAAAAAAGTTCTTGTCAACAACTTGCACCCTATCGGTTGCACGCCGTCACAAACCCGAACCAATAACTACACCGC
GTGCGATATTTT-TGGAAATTTGGGTGCATCAATTCACAACGATAACCTGAAACAAGTCATGACAGTAAAGAAGAATGTC
CAGATCATCGACCTATACACCTCATTTACTAGTATTGTGGATCATGCGCCAGGTATGTATGTATTTTTCATGCAAAGTGT
CTCATTATTTTAGAAGTTCCTAACA-TAATTAGATGG--A-GTTTGATTGTGTGCTTGTACTACTTCTTATGAAC-TTTT
TTATTTTTATCTACATTAAT-GTAGGTAAAGGCTCGGATCTATCTAAGCAATTCAAGCGCAAACTGTCGCCCTGTTGCGA
GAGTTTGGATTCGAATGGCTATTGCGGACAACAAGGCGAGTCGTCCTCAGAGCTTCTATACACCGTGTGCGACAAGTCCG
ACAAATTTTTCTATTGGGACGACATGCACCCCACACATGCAGGATGGGAGGCTATCATGAAACAGTTGGAAAAGCCCTTG
AAGGAGTTTGTAGATCAAGAGTAGGTAGCTAGGTTTTAAATAAGTTATCT-ATGTATGCATCCATGATGACAATCTTCTG
ATTGTATTTGTTTG----ATAGTTTCAAGTATTTCAAAGACTGG-ATTTTCT-------AGGATGAATATTAAATTGCAT
TTGCATCTTCTTTTGTGAAAACTATATTTATAAGATGTAATTAATGTATACCATA----TGCCACATTTACAGTAAAGAT
GTGTTCTAGCTATACAAGTTGAGTACTTGC---ATATATACGGCTCTATAAGCTCAACGCGATT-CCACGTCGATTGA-T
TTT-TGTTGTCAGC---ATGATCTATCGAGGCAACGTGTTCTAAG---GGTGACGGGTGCCTTGTCGGCGGTAGTGGTTG
TTCGGTCATCCAGAGCTCTCGATGTATTTATTTTATTTGGGCTGATTTGTACTAATGGTGAACCTTATAACCGATCAAAG
TCCTTTTTCAACAAAAAAGGTAAATATGATAGAAAAACTAAAGCCAATCATTCGAGCTTGATCACCCATTCTCACAAGAT
TAGAGGATGTTCAGATAAGGATAAGGTTTATTTTTGAAGATCTTCGGCATTTAATTAGTTCATCAGAAGTACACCATCCA
AATACACCTTTATGCTCTTCGAGATTAACTTGTTGGCTTACAAAAAACTACCACCGAGATGCTTGTTTGCTTTTAAGACA
GAACTCCCTGAAGGGCTGCTGCTTTTCCATTAAGAATGAA--TAGTTACAGTAGACTTCCGAATTAAATAACTGGAACTT
GGGCATGTGTTGCAACTTGACAATAGACTCCACCCCATCAAAATTGTCGACTTC-GCATGCATTGTGACACTGTACATGG
ATATCTCTTGTGCAGTCAACGCTTTTCTTGATTCAGGTAAGGATATATAGATTTGAAACTATTTTTAAAATGGTGTTGTA
TTTAATTTTTAGGGGGTGCACAAGTACTTCCATGATCGTCCAGCCGGCAATCGAGTGTAAAAAAATACGATATCAATATG
GAGAAA-GAAACATCAC
>chr5A_1
AATAGCTCACCAAGAAAGGTGCCCAATCAGAACAGCCACATTTGTAAGTACTGGGCAAGATACAACACGTTGAATCATGC
AAACAAATTACGCAATAACAAGATTCCAGAAAGAAAGAAAAAAGAACAACCGTAGTCATAACAAATAAAGGAACCATAAA
AAAGACACCTGGAACAGTTTTTCCTACTACAGCAATGGCGGATGTTTCTGAATATGGTTGATCAGTTA-TTAGTTTAC--
--AATAGCGGACACCGATATACC--------------------------------------------------------A
AAAAAACGGAACAACTAACAGAGTAACCTTTTTATAACTTAATCAAATTCAGAAAAGTTGAGTACAAGACACGCAGCAAC
C----------------------------------------GACAGAACACCGAGGCTAGCTACCTGACGGAC-------
-----------CAAGATTGCCCAAGGAGAAGAAGCTCCAACGCGCCCTTAGCCGGTTAAGCGTCCGCGCTGTTAGATT--
GCCCGCTGGGAATGGCTCGTCAGCCGAGCCAAACAGCGTAGTGCCGATGTCGCTAACTCTTGGTGACAAGTGACATCAAC
GAGGGAGATGACAAGCTACGCTGATTCCTCAAGAACTTTGCCAACGCCGTCAAAGACGGCACCCACCGGCAAATCATTGA
CAT------------------------C------------------------CACTGCAGCGTCGTAAGCGAGACGCTCC
ATCGATCCT---------------------------------------------------------G---------TCCG
TGACGCATATCCGTGTCCGTGTCCGACCTCCGACGATGCTGGGGCTCCGACTCCGATCGATCGAGGTC-------GCAGG
CCCGATTTCGATTTGTTTTCCTGCTGGTCCATACCAGTAGTTCTATAAATTGAAGCGAGAGGGCCAGGCCATGGCGTACG
TGCATCGCAGACAAGCCCTTTGTG-TCCCTGATTTTCATCGGCGAAAGAGTAGCGGT-----------------------
TAGAAGCCGCAGAAACCAGCAGTTCTCGTAGGATCCTCCCTCGATGAAGCTTCTTCCGGCCGCCCTCGGCCTCGTCCTC-
--CTCCTCCTCCTCGTTCTAAATCCCAATGGCGTGGAGGCCCGGCCAGCCCCTGCCGGCGGCCATCAGAAGAAGTCGTCG
AGCAACACTTTCTTCGTCTTCGGGGACGACTTCTCCGACAACGGGAACCTCCCTCTCACCGACCCC----GTCACGAAGA
TGTCGCGGCGATGGGCCTACCCCTACGGCTCCGTGTATACCGATGCCCATGGGTTTCCGCGACCAAATACTCCGTCTGGC
CGCTTCTCCAACTACAAAATCCAGTCAGATTTCATCGGTAAGGC--ACTACCTTATGTTACCACAAAAAAA-GTAATCCC
TG---------------CCCC----------TGGTGAATCACAATTAT--CCCTACTAACTGCTTTATTAATAAATTGCA
GCGACAATGTTGGGGTTGGAGGAGGCCCCTCCTGCGCATGCCCTCACAGCAGACAAAACCTGCGACCCGTCCGGCATGAC
CTTCGCCTATGGTGGTGCAGGTGTGCTGGAAAGTACATCACACGGGGTTCACACCCTCCGCAAGCAGGTCGACGCTTTCA
GGAAGATGGTCAAGGATGGGACCATCTCTGAGAAGCAGTTGAGTCACTCGGTAGCGCTCGTGGCCATCTCCGGCAACGAT
TATGCAAGCACAGGCGTGATTGGCC-------------------------TAAGTAACCCCAGTGATGTGAGTATCATAT
CAACGCAGAATGTATATATATCCATAC-------------ACTAATTTGTTTGTGCATCTTACTAACTTAA---TTTC-A
TGTATGTGATGCTGATTACTGCTTATATTGGAAAGGTGACAGAAGAGATCGCGGCTAATGTGGAGCAATTGTTGAAGCTC
GGAGTGAAAAAAGTTCTTGTCAACAACTTGCACCCTATCGGTCGCACGCCGTCACAAACCCGAACCAATAACTACACCGC
GTGCGATA-TTT-TGGAAATTTGGGTGCATCAATTCACAACGATAACCTGAAACAAGTCATGACAGTAAAGAAGAATGTC
CACATCATCGACCTATACACCGCATTTACTAGTATTGTGGATCATGCGCCAGGTACGTATGTATTTT-CATGCAAAGTTT
CTCATTATTTTAAAAGTTCCTAACA-TTATTAGATGG--A-GTTTGATTGTATGCTTGTACTACTTCTTATGAAC-TTTT
TTATTTTTATCGGCATTAAT-GTAGGTAAAGGCTCAGATCTATCTAAGCAATTCAAGCGCAAACTATCGCCATGTTGCGA
GAGTTTGGATTCGAATGGCTATTGCGGACAACAAGGTGAGTCGTCCTTGGAGCTTCTATACACCGTGTGCGACAAGTCCG
ACAAATTTTTCTATTGGGACGACATGCACCCCACATATGCAGGATGGGAGGCTATCATGAAGCAGTTGGAAAAGCCCTTG
AAGGAGTTTGTAGATCAAGACTAGGTAGCTAGGTTCTAAATAAATTATCT-ACGTATGCATCCACGATGACAATCTTCTG
ATTGTATTTGTTTG----ATAGTTTCAAGTATTTCAAAGACTGG-ATTTTCT-------AGGATGAATATTAAATTGTAT
TTGCATCTAGTTTTGCGAAAACTATATTCATAAGATGTAACTATTGTATATCATA----TGCCACATTTACAATAAAGAT
GTGTTCTAGCTATACAAGTCGAGTACTTGC---CTATATATGGCTCAATAAGCTCAATGCAATT-CCACATCGATTGA-T
TTT-TGCTGTCAGC---ATGGTCTACCGGGACAACGTGTTCTAAGGGTGATGACGGGTGCTTTGTCGACGGTAGTGGTTG
TTCGGTCAGCCAGAGCCCTCAATGTATTTATTTTATTTGGGCTGCTTTGTACTTATGATGAACCTTATAATAGAT-AAAG
TCTTTTTTCACCCAAAA----AAATATGATAGAAAAACTAAAGCCAATCATTCGAGCTTGATCACCCATTCTCACAAGAT
CAGAGGATGTTCAGATAAGAATAAGGTTTATTTTTGAGGATCTTTGGGATTTAATTAGTTCATCAGAAATACACCATCCA
AATACACCTTTATGATCTTCGAGATTAACTTGCTGGCTTACAAAAAACTAGCACCGAGATGCTTGTTTATTTTTAAGACG
GAACT-CCTGAAGGGCTGCTGCTTTTCCATTAAGAATGAAGATAGTTACAGTAGACTTCCGAATTAAATAACTGCAACTT
GGGCATGTGTTGCAACTTGACAATAGAG---ACTCCATCAAAATTGTCGACTTGGGCATGCATTGTGACACTGTAGATGG
ATGTCTCTTGTGCAGTCAACGCTTTTCTTGATTCAGGCAAGGATATATAGATTTGAAATTATTTTAAAAATGGTGTTGTA
TTCAATTTTTAGGGGGTGCACAAGTACTTCCATGACCGTCCAGCCGACAATCGAGTGTAACAAAATATGATATTAATATG
GAAAAAAGAAACATCAC
>chr5B_123
--------------------------------------------------------------------------------
-----------------------------------------------------------AACAAGTAAAGGAACCATAAA
AAGGACACCTGGAACAGTTTTCCCGACTACAGCAATGGTGGATGTATCTGAATATGGGTGATCAGTTATTTAGTTTACAA
AAAATAGCGCACATCGATACGATGTACTCCCTCCGCCCCATAATATAAGAGTGTT--TTTTACACTACGCTAGTGTCAAA
AACGAACGCAACAACTAATAGAGTTACCTTAACTT------ATCAAATTCAGAAAAGTTCAGTACAAGACACGCAGCAAC
CGGAAGAACAAACCAGGAAAATCAGGGAGATCCAAGTGCCCGACAGAACACTGAGG----------------CTGGCAAC
CTGACCTCCGTCAAGATGGCCGAAGGAGAAGAAGCTCCAACGCGCCCTCAGCCGGTTAAGCATCCTGGCTGTCCGATGCA
GCCCGCTGGGAAAGGCTGGCCCTTCCTGATGCAGTACCGA---------------------GGTGACGAGCGACATCAAC
GAGGGAGAACACAAGCTACGCTGATTCCGGAAGAACTTCGCCAACGCCGTCAAAGACGGAACCCACCGGCAAATCGTTTA
CATCCACTGCAGCGTCAAGGTGTGCAGC------------------------CACTGCAGCGTCGTAAGCGAGACGCTCC
GTCGGTCCCTCCGTGACGTAACTTTTGACATGACGAGCGGCTGGCGCCTGCTGGAGGCCCGGTCCGG---------TCCG
TGACGCATA------TCCGTGTCCGACCTCCGACAATACTGGGGCTCCGACTCCGATCGA----GGTA-------ACAGG
CCCGATTTCGACTTGTTTTCCTGCTGGTCCATAGCAGTAGTTCTATAAATTGAAGCAAGAGG---------------ACG
TGCATCGCAG-CAAGCGATTTGTG-TCCCTGATTTTCGTCGGCGAAAAGAGTAGCGATTTTCTGATCCTCGGGACAGCGG
TAGCAGCCGCAGAAACCAGTAGTTCTCGTACGACCCTCCCACGATGAGGCTTCTTCCGGCCGCCCTCGGCCTCGTTGTC-
--CTCCTCCTCCTCGTTCTAAATCCCAATGGCGTGGAGGCCCGGCCAGCCCCTGCCGGCGGCCATCAGAAGAAGTCGTCG
AGCAACACCTTCTTCGTCTTCGGGGACGACTTCGCGGACAACGGGAACCTCCCACCCACCGAGCCT----GTCACGGAGA
TGTCGCGGCAATGGGCCTATCCCTACGGCTCCGTGTATGCCGACGC----------CCGCGACCAAATACTCCGTCTGGC
CGGTTCTCCAACTACAAAATCCAGCCAGATTTCATCGGTAAGGC--ACTACGTTATATTACCCCAAAAAAAAGTACTGTT
ATATTGTAATCCTTGCCCCCC----------TGGTGCATCACAATTAT--CCCTACTCACTGTTTTATGAATAACTTGCA
GCAACAATGTTGGGGTTGGAGGAGGCCCCTCCTGCGCATGCCCTCACAGCTGAGAAAACTTGCGACCCGTCCGGCATGAC
CTTCGCCTATGGTGGTGCAGGTGTGCTAGAAAGTACATCACACGGAGTTCACACCCTCCGCAAGCAGGTTGACGCTTTTA
GGAAGATGGTCAAGGATGGGACCATCTCTGAGAAGCAGTTGAGTCACTCGGTAGCCCTCGTGGCCATCTCCGGCAATGAT
TATGCAAGCGCAAGCGTGATTGGTC-------------------------TAAGTAGGCCCAGTGATGTGAGTATCATAT
CAACGCAGATTGTATATACATCAATACAGTAATTTGAAGAACTAATTTGTTTGTGCATCTTTCTAACTTAA---TTTTAA
TGTATGTGATGCAGATTAAAGCTTATATTGGAAAGGTGACAAAAGAGATCGCAGCAAATGTGGAGCAATTGTTGAAGCTT
GGAGTGACAAAAGTTCTTGTCAACAACTTGCACCCTATCGGTTGCACGCCATCACAAACACGAACCAATAACTACACTGT
GTGCGATATTTT-TGGAAATTTAGGTGCATCAATCCATAACGATAACCTAAAACAAGTCATGACAGTAAAGAAGAATGTT
CACATCGTCGACCTATACGCCGCCTTTAGTAGCATTGTGGATCATGCGCCAGGTATGTATGTATTTT-CGTGCAAAGTGT
CTCATTATTTTAAAAGTTCCTAACA-TAATTAGATGG--A-GTTTGATTGTGTGCTTGCACTACTTCTTATGAACTTTTT
TTTATTTTATCTACATTAAT-GTAGGTAAAGGCTCAGATCTATCTAAGCAATTCAAGCGCAAACTATCGCCCTGTTGCGA
GAGTTTGGATTCGAATGGCTATTGCGGACAACAAGGCGAGTCGTCCTCAGAGCTTCTATACACCGTATGCGACAAGTCCG
GCAAATTTTTCTATTGGGACGACAAGCACCCCACACATGCAGGATGGGAGGCTATCATGAAACAGTTGGAAAAGCCCTTG
AAGGAGTTTGTAGATCAAGACTAGGTAGCTAGGTTTTAAATAAATTATTT-ACGTATGCATCCACGATGACAATCTTCTG
ATTGTATTTGTTTG----ATAGTTTCAAGTATTTCAAAGATTGG-ATTTTCT-------AGGATGAATATTAAATTGTAT
TTGCATCTTCTTTTGTGAAAACTATATTCATAAGATGTAATTAATATATATCATA----TGCCACATTTACAATAAAGAT
GTGTTCTAGCTATACAAGTCGAATACTTGC---CTATATACGTCCGAATAAGCTCAACGCAATT-CCACATCGATCGA-T
TTT-TGTTGTCAGC---ATGGTCTACCGGGGCAACATGTTCTAAGTGTGATGACGGGTGCCTTGTCGACGGTAGTGGTTG
TACGGTCATCCAGAGCCCTCGATGTATTTATTTTATTTGGGCTGCTTTGTATTTATGATGAACCTTATAATAGATCAAAG
TCCTTTTTCACCAAAAAC---AAATATGATAGAAAAACTAAAGCCAATCATTCGAGCTTGATCACCCATTCTCACAAGAT
TAGAGGATGTTCAAATAAGGATAAGGTTTATTTTTGAGGATCTTCAGCATTTAATTAGTTGATCAGAAATACACCATCCA
AATACACCTTTATGCTCTTCGAGATTAACTTGTTGGCTTACAAAAAACTAGCACCGAGATGCTTGTTTGCTTTTAGGACG
GAACTCCCTGAAGGGCCGCTGCTTTTCCATTAAGAATGTAGATAGTTACAGTAGACTTCCGAATTAAATAACTGCAACTT
GGGCATGTGTTGCAACTTGACAATAGACTCCACTCCATCAAAACTGTCGACTTGGGCATGCATTGTGACACTGTACATGG
ATGTCTCTTGTGCAGTCAACGCTTTTCTTGATTCAG-CAAGGATATATAGATTTGAAACAATTTTAAAAATGGTGTTGTA
TTTAATTTTTAGGGGGAGCACAAGTACTTCCATGACAGTCCAACCGGCACTCAAGTGTAGCAAAATATGATATCAATATG
GAAAAA-GAAACGTCAC
>chr7B_781
--------------------------------------------------------------------------------
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----------------------------TCCGACTGTGCCGTGGCTCCGACTCCGGTCGA----GGTCGCAACTGGCAAG
CCCGATATCGACTTGTTGTGCTGGTCC---------GTGGTTCCATAAATTGAT--GAGAGGGCCAGGCCATGATGTACG
AGCATCGCAGACAAGCACTTCACGTTCCTGGTTTTTCGTTGGCGAAAGAGTAGAACGACCGGCCTCCGCGACGCAAAAGC
GCCGCCGGGATT------------------------------GATGAAGCTTCTTCCGGCCGCCCTCGGCCTCGTCCTC-
--CTCT---TGCTCGTTCTGAATCCCAATGGCGTGGAGGCCCGGCCAGCCCCGTCCGGCAGCCATCAGAAGAAGGCGTCG
AGCGCTACCTTCTTCGTCTTCGGGGATGACTTCGCCGACAATGGGAACC----TCCCTCCGACCGAACCAGTCACGGAGA
TGTCGCGGCAATGGGCCTACCCCTACGGCTCCAACTACGTCGATGCCGATGGGTTTCCGCGGCCGAATACTCCGTCCGGC
CGCTTCTCAAACTACAAAATTCAGTCCGATTTCATCGGTAAGTACTA---TGTTATATTACTAGAAAAATA-CTCAG---
---TTATACTGTAATTTCATCCAGTAATTCATGGTGCATCACAATTAA--CCCTACTCGTTGTTTTATTAATAACTTGCA
GCAACAATGTTGGGATTGGAGGAAGCCCCTCCGGCGCATGCCCGCACGGCAGACAAAACATGCAATCCATCCGGCATGAC
CTTTGCTACCGGTGGTGCAGGCGTGTTGGACAGTACATCGCACGAGGTCCCCGTCCTAGCCAAGCAGGTCGAAACTTTTA
GGAAGATGATCAAGGACGGGACCATCACAAAGAATCAACTAAGTCGCTCCGTAGCACTCGTGGCCTTCTCCGGACACGAC
TATGCAGGCACCGGTGTTATTGGCC-------------------------TTAGTAGCCCCAATGATGTGAGTATCATAT
CAACGCACAATGTATATATGC--ATGCACTAGTTTGAACAACTAATTCGTTTGTGCATCTTACTAACTTATAATTTTC-A
TGTACGCGATGTAGATTAATGCTTATATTGAAAAGGTGACAAAAGAGATTGCAGCTAATGTGAATCAATTGTTGAAGCTT
GGGGTGACAAAGGTTCTTGTCAATAACTTGCACCCTATCGGTTGCACGCCATCACACACCCGAACCAACAACTACACCAC
GTGTGATA-TTTTTGGAAACTTGGGTGCATCCATCCACAACGATAATCTGAAACAAGTTATGACATCAAAGAAGAATATC
TACATCGTCGACGTGTACACCGCCTTTGCTAGTATTGTGGATCATGCGGCAGGTATGTATCTACATGCATTCAAAAGTGT
CTTATTATTTTATAATTATCTTAATCTAATTAGATGG--G--TTTGATTGTGTACTTGCAATAATTTATCTAAAC-ATTT
TAAATTTCATGTGCATTAAT-GTAGGTAAAGGCTCCGACTTGTCTAAACAATTCAAGCGCAAACTATCGCCGTGCTGCGA
GAGTTTGAATTCGAAGGGTTACTGCGGACGGCAAGACGAGTCATCCGCGGAGCTACTGTACACTGTGTGCGACAAATCGA
ACAAATTTTTCTATTGGGACGACATGCATCCGACCCATGCAGGATGGGAGGCTGTCATGAAACAGTTAGAAAAGCCCTTG
AGGGAGTTTGTAAATCGAGCCTAGGTAGCTGGGCTTTCTGTATCTGTGTAGATCTTTGTATCCATGATGCCAGCCTTCTG
ATTGTA----TTTA----ATAGTTTCATGTATTTTAAAGACTGGGATTTTCCCGATTCCATGATGAATATTATACTGTAT
TTGCATCTACTTTTGTGAAGAC----------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>chr7A_999
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------CGATGAAGCTTCTTCCGGCCGCCCTCGGCCTCGTCCTC-
--CTCC---TGCTCGTTCTGAATCCCAATGGCGTGGAGGCCCGGCCAGCCCCGGCTGGTGGCCATCAGAAGAAGGCGTCG
AGCGCTACCTTCTTCGTCTTCGGGGATGACTTCGCCGACAACGGGAACC----TTCCTCTGACCGACCCAGTCACCAGGA
TGTCGAGGCAATGGGCCTACCCCTACGGCTCCAACTACATCGATGCCGATGGGTTTCCGCGGCCGAATACTCCGTCCGGC
CGCTTCTCAAACTATAAAATCCAGTCGGATTTCATCGGTAAGTACTACTCATA---------------------------
---TTATAATCTCATGTTATGCTGTAATCTATGGTGCATCACAATTATAACCATACTCGTTG-TTTATTGATAACTTGCA
GCAACAATGCTGGGATTGGAGGAAGCCCCTCCGGCGCATGCCCGCACGGCAGAGAAAACCTGCGACCCATCCGGCATGAC
CTTTGCTACCGGTGGTGCAGGCGTGTTGGACAGTACATCACACGAGGTCCCCGCCCTCGCCAAGCAGGTCGACACTTTTA
GGAAGATGGTCAAGGACGGGACCATCATGGAGAATCAATTGAGTCGCTCCGTAGCGCTCGTGGCCTTCTTTGGCAATGAC
TATGCAGGCACTGGCGTCATTGGCATAAGTAGGCACTGGCGTCATTGGCATAAGTAGCCCCAGCGATGTGAGTATCATAT
CAACGCACAATGTATATATGC--ATACACTAATTTGA----------------TGTATCTTACTAACTTACAATTTTC-A
TATATGCGATGTAGATTAATGCTTATATTGGAAAGGTGACAAAAGAGATTGCAGCTAATGTGGATCAATTGTTGAAGCTT
GGGGTGACAAAGGTTCTTGTCAATAACTTGCACCCTATCGGTTGCACGCCATCACACACCCGAACCAACAACTACACCAC
GTGTGATA-TTCTTGAAAACTTGGGTGCATCAATCCACAACGATAATCTGAAACAAGTTATGGCATCAAAGAAGAATGTC
TACATCATCGACGTGTACACGGCCTTTGCCAATATTGTGGATCATGCAGCAGGTATGTATCTACAAGCATTCACAAGGGT
CTCATTATTTTAGAATTATCTTAATCTAATTAGATGG--G-GTTTGATTGTGTACTTAAAATACTTTATCTGAAC-ATTT
TCAATTTCATGTGCATTAAT-GTAGGCAAAGGCTCAGAGATGTCCAAACAATTCAAGCGCAAACAATCGCCGTGCTGCGA
GACTTTGAATTCGAATGGTTACTGCGGACAGCAGGGCGAGTCATCCGCGGAGCTTCTGTACACAGTGTGTGACAAGTCGA
GCAAATTCTTCTATTGGGACGACATGCACCCAACACATGCAGGATGGGAAGCTGTCATGAAACAGTTGGAAAAACCCTTG
AGGGAGTTTGTAAACCGAGCGTAGGCAGCTAGGCTTTATGTATTTGCGTAGATCTTTGTATCTATGATGACAACCTTTTG
ATTGTA----TTTG----ATAGTTTCATGTATTTCAAAGACTGGGATTTTCCCGATTCCATGATGAATATTATACTGTAT
TTGCATCTT-TTTTGTGAAGACTATATTTATAAGAAGTAACTAATG----TCATA----TGCCACATCTACAATAAAGAT
GTGTTCTAGCTATACAAATCGAGTACTTGC---CTATATACAGCTCAATAAGCTCAAGGCAATTTTCACACCGGTTGATT
CTTGTGTTGTCGGCTTGGTAGTATACCGGGTCGGCATCTTCTACG---GGTGACAGGTGCCTT-----------------
--------------------------------------------------------------------------------
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-----------------
>chr3A_1001
--------------------------------------------------------------------------------
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-------------------------------------------ATGAAGCTTCTTCCGGCCGCCCTCGGCCTCGTCCTCA
TCCTCC---TCCTCGTTCTGAATCTCAATGGTGTGGAGGCCCGGCCTGCGCCTACCGGCGGCCATCAGAAGAAGGCGTCG
AGCTACACCTTCTTTGTGTTTGGGGATGACTTCGCCGACAATGGGAACC----TCCCTCCGACCAACCCCGTCACTGAGA
TGTCGCGGCAATGGGCCTACCCCTACGGCTCCAACTACGTTGATGCCGATGGGTTTCCGCGGCCGAATACTCCGTCCGGC
CGCTTCTCAAACTACAAAATCCAGTCGGATTTCATCGGTAAGTACTAGTATGTTATATTACCCTAAAAAGGTACTCTGTT
ATATTGTAATCTCATGTTATGCTGTAATCTATGGTGCATCACAATCAA--TCCTACTCGTTGTTTTATTGATAACTTGCA
GCAAAAATGCTGGGATTGGAGGAAGCCCCTCCGGCGCATGCCCGCACAGCAGAGAAAACCTGCGACCCGTCCGGCATGAC
CTTTGCTACCGGTGGTGCATGCGTGTTGGACAGTACATCGCACGAGGTCCCTGCCCTCGCCAAGCAGATTTACACTTTCA
AGAAGATGCTCAAGGATGGGACCATCACGGAGAATCAACTGAGTCGCTCTGTAGCGCTCGTGGCCTACTCCGGCAACGAC
TATGCAGGCACCGGCGTCATTGGGC-------------------------TAGGTAGCCCCAACGATGTGAGTATCATAT
CAACGCACAATGTATATATGC--ATACACTAATTTGAACAATTAATTCGTTTGTGAATCTTACTAACGTATAATTTTC-A
TGTATGCAATGTAGATTAATGCTTATATTGGAAAGGTGACAAAAGAGATTGCAGCTAATGTGGATCAATTGTTGGAGCTT
GGGGTGACAAAGGTTCTTGTCAATAACTTGCACCCTATCGGTTGCACGCCATCACACACCCGAACCAACAACTACACCAC
GTGTGATA-TTTTTGGAAACTTGGGTGCATCTATCCACAACGATAATCTGAAACAAGTTATGACATCAAAGAAGAATGTC
TACATCATTGACGTGTACACCGCATTCGCTAATATTGTGGATCATGCGGCAGGTATGTATCTACATTCATTCAAAAGTGT
CTCATTATTTTAGAATTATCTTAATCTAATTAGATGG--G--TTTGATTGTGTACTTGAAATACTTTATTTGAAC-ATTT
TAAATTTCATATGCATTAAT-GTAGGTAAAGGCTCAGAGTTGTCCAAACAATTCAAGCGCAAACTATCGCCGTGCTGCGA
GAGTTTGAATTCGAAGGGTTACTGCGGACAGCAAAACGAGTCATCCGGGGAGCTTCTGTACACTGTGTGTGACAAGTCAA
GTAAATTTTTCTATTGGGACGATATGCACCCGACCCATGCAGGATGGGAGGTTGTGATAAAACAATTGGAAAAGCCCTTG
AGAGAGTTTGTAAATCAAGCCTAGGTAGCTGGTTTT-ATATATCTGTGTAGAGCTTTGCATCCATGATGACAACCTTCTG
ATT-TA----TTTC----ATAGTTTCAAGTATTTGGAAGACGGG-ATTTTCCCGATTCCATGATGAATATTATATTGTAT
TTGCATATTCTTTTGTGAACAC----------------------------------------------------------
--------------------------------------------------------------------------------
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>chr7A_1348
--------------------------------------------------------------------------------
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TATGCAGGCACCGGCGTCATTGGCC-------------------------TAAGTAGCCCCAATGATGTGAGTAACATAT
CAACACACAATGTATATATGC--GTACACTAATTTGAACAATTAATTTGTTTGTGCATCTTACTAACTTATGATTTTC-A
TGTATGTGATGTAGATTAATGCTTATATTGGGAAGGTGACAAAAGAGATTGCGGCTAATGTGGATCAATTGTTGAAGCTC
GGTGTGACAAAGGTTCTTGTCAATAACTTGCACCCTATCGGTTGCACGCCATCACACACCCGAACCAACAACTACACCAC
GTGTGATA-TTTTTGAAAACTTGGGTGCATCAATCCATAACGATAATCTGAAACAAGTTATGACATCAAAGAAGAATGTC
TACATCGTGGACGTATACACCGCCTTTACCAATATTGTGGATCATGCGGCAGGTATGTATCTACATGCATTCAAAACTGT
CTCATTATTTTAGAATTATCTTAATCTAATTCGATGGGGG--TTTGATTGTGTACTTGAACTACTTTATCTGAAC-ATTC
TTAATTTCATGTGCATTAAT-GTAGGTAAAGGCTCAGAGCTGTCTAAACAATTCAAGCACAAACTATCGCCGTGCTGCGA
GAGTTTGGATTCGGATGGTTATTGCGGACAGCAAGGCGAATCATCCGCAGAGCTTTTGTACGCTGTGTGCGACAATTCAA
ATAGATTTTTCTATTGGGATGACATGCACCCGACCCATGCACGATGGGAGGCTGTCATGAAACAGTTGGAAAAACCCTTG
AGGGAGTTTGTAAATCAAGCCTAGGTAGCTAGGCTTTATGTATTTGTTTAGATCTTTGTATCCATGATGACAACTTCCTG
ATTGTA----TTTG----ATAGTTTCATGTATTTCGAAGACTAGGATTTTC-----------------------------
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>chr7D_1348
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TATGCAAGCACCGGTGTCATTGGCC-------------------------TAAGTAGCCCCAATGATGTGAGTATCATAT
CAACACACAATGTATATATGC--ATACACTGATTTGAACAATTAATTTGTTTGTGCATCTTACTAACTTATAATTTCC-A
CGCATGCGATGTAGATTAATGCTTATATTGGAAAGGTGACAAAAGAGATTGCAGCTAATGTGGATCAATTGTTGAAGCTT
GGGGTGACAAAGGTTCTTGTCAATAACTTGCACCCTATCGGTTGCACGCCATCACACACCCGAACCAACAACTACACCAC
GTGTGATA-TTTTTGGAAACTTGGGTGCATCCATCCACAATGATAATCTGAAACAAGTTATGACATCAAAGAAGAATGTC
TACATCATCGACGTGTACACCGCCTTCACAAATATTGTGGATCATGCGGCAGGTATGTATCTACATGCATTCAAAAGCGT
CTCATTATTTTATAATTATCTTAATCTAATTTGAT--GGG--TTTGATTGTGTACTTGAAATACTTTATCTGAAC-ATTT
TAAATTTCATGTGCATTAAT-ATAGGTAAAGGCTCAGAGTTGTCTAAACAATTCAAGCGCAAACTATCGCCGTGCTGCGA
GAGTTTGAATTCGAAGGGTTACTGCGGACAGCAGGACGAGTCATCCGCGGAGCTTCTGTACACTGTGTGCGACAAATCGA
GCAAAATTTTCTATTGGGACGACATGCACCCAACACACGCAGGATGGGAAGCTGTCATGAAACAGGTGGAAAAACCCTTG
AAGGTGTTTGTAGATCAAGACTAGGTAGCCAGGTTTCATATGTCGTTGTAGCGCTTTTCGTACATGATGACAATATTCTG
ATTGTA----TTTGTTCGATAGTTTTAAGCATTTCAAAGACTGT-ACTTTC------------------------TGGAT
TTGAGTCTTCTTTTGTAGAAACTATATTCATAAGAAGTAATTAATG----TATTTCATATCGCACATCTACAATAAAGAT
GTGTTCTAGCTATACAAACCGAGTGTTTACCCTATATATGCGGTTCAATAAGGTCAAGGCAATT-TCACGCCGGTTGATT
TTT-TGTTGTCGAC---GTGGTCTACCGGGCCGGCATGTTCTAGG---GGTGACGGGTATCTTGTC--------------
--------------------------------------------------------------------------------
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>chr7D_1348
--------------------------------------------------------------------------------
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TATGCAGGCACCGGCGTCATCGGCC-------------------------TAAGTAGCCCCAACGATGTGAGTATCATAT
CAACGCACAATGTATATATGC--GTACACTAATTTGAACAATTAATTTGTTTGTGCATCTTACTAACTTATGATTTTC-A
TGTATGCGATGTAGATTAATGCTTATATTGGGAAGGTGACAAAAGAGATTGCGGCTAATGTGGATCAATTGTTGAAGCTC
GGGGTGACAAAGGTTCTTGTCAATTACTTGCACCCTATCGGTTGCACGCCATCATACACCCGAACCAACAACTACACCAC
GTGTGATA-TTTTTGAAAACTTGGGTGCATCACTCCATAACGATAATCTAAAACAAGTTATGACATCAAAGAAGAATGTC
TACATCGTGGACGTGTACACCGCCTTCACCAATATTGTGGATCATGTGGCAGGTATGTATCTACATGCATTCAAAACTGT
CTCATTATTTTAGAATTATCTTAATCTAATTCGAT--GGGGGTTTGATTGTATACTTGAACTACTTTATCTGAAC-ATTC
TTAATTTCATGTGCATTAATCGTAGGTAAAGGCTCAGAGTTGTCTAAACAATTCAAGCGCAAACTATCGCCGTGCTGCGA
GAGTTTGGATTCGGATGGTTACTGCGGACAGCAAGGCGAGTCATCTGCGGAGCTTTTGTACACTGTGTGCGACAATTCAA
ATAGATTTTTCTATTGGGATGACATGCACCCGACCCATGCAGGATGGGAGGCTGTCATGAAACAGTTGGAAAAACCCTTG
AGGGAGTTTGTAAATCAAGCCTAGGTAGCTAGGCTTTATGTATTTGTGTAGATCTTTGTATCCATGATGACAACTTTCTG
ATTGTA----TTTG----ATAGTTTCATGTATTTCAAAGACTGGGATTTTC-----------------------------
--------------------------------------------------------------------------------
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>chr7B_1348
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TATGCAGGCACCGGCGTCATTGGCC-------------------------TAAGTAGCCCCAACGATGTGAGTATCATAT
CAATGCACAATGTATATATGT--GTACACTAATTTGAACAATTAATTTGTTTGTGCATCTTACTAACTTATAATTTCC-A
TGTATGCGATGTAGATTAATGCTTATATTGGGAAGGTGACAAAAGAGATTGCAGCTAATGTGGATCAATTGTTCAAGCTC
GGGGTGACAAAGGTTATTGTCAATAACATGCACCCTATCAGTTGCACACCATCACACACCCGAACCAACAACTACACCAC
ATGTGATA-TTTTTGGAAACTTGGGGGCATCAGTTCATAACGATAATCTGAAACGAGTTATGACATCAAAGAAGAATGTC
TACATCATCGACGTGTACACCGCCTTTGCTAATATTGTGGATCATGGGGCAGGTATGTATCTACATGCATTCAAAAGTGT
CTCATTGTTTTAGAATTATCTTAATCTAATTAGAT-GGGG--TTTGATTGTGTACTTGAACTACTTTGTCTGAAC-ATTT
TTAATTTCATGTGCATTAAT-GTAGGTAAAGGCTCAAAACTGTCCAAACAATTCAAGGGCAAACTATCGCCGTGTTGCGA
GAGTTTGGACTCGAAGGGTTACTGCGGACAGCAAGGCGAGTCATCCGCGGAGCTTCTATACACTGTGTGCGACAAGTCGA
GAAATTTTTTCTATTGAGACGACGTGCACCCAACCCATGCAGGATGGGAGGTTGTGATGAAATAATTGGAAAAGCCCTTG
AAGGAGTTTGTAAATCAAGCCTAGGTAGCTGGTTAT-ATATATGTGTGTAGAGCTTTGCATCCATGATGAGAACCTTCTG
ATTGCA----TTTC----ATAGTTTCAAGTATTTCAAAGACAGG-ATTTTCCCGATTCCATGATGAATATTATATTGTAT
TTGCATATTCTTTTGTGAA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------
>chr3D_1871
--------------------------------------------------------------------------------
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-----------TACATTGAT-GTAGGTAAAGGCTCAGAGCTATCGAAGCAATTCAAGCGCAAACTATCGCCGTGTTGCAA
GAGTTTAGATTCGAAGGGTTACTGTGGACAGCAAGGCGTGTTGTCCACAGAGCTTCTTTACGCCGTGTGCGACAAGTCCA
ATAAATTTTTCTATTGGAACGACATGCATCCAACGCATGCGGGATGGGAGGCTGTCATGAAACAATTGGAAAAGCCCTTG
AGGGAGTTTTTAGATCAAGACTAGGTAGTCAGCTTTCATATGTCGTTGTAGCGCTTTTCATCCATGATGACAATATTCTG
ATTGTATTTGTTTG----ATAGTTTCAAGCGTTTCAAAGACTGT-ATTTTCTGGATTCCAGGATGAATATTATATTGCAT
TTGCGTCTTCTTTTATGAAAACTATATTCCTAAGAAGTAATTAGTG----TATTTCATTTGGCACATCTACAATAAAGAT
GTGTTCTAGCTATACAAACCGAATGCTTGC---CTATATGCGGCTCAATAAGCTCAAGGCATTT-CCACACCGTTTGATT
ATT-TGTTGTCGAC---GTGATCTACCGGGTCGGCATGTTCTAGG---GGTGACGGGTGCCTTGTC--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------
>SNPs
-----------------------------------S--------S--S---------------------------S----
--------------------------------SSSSSSSSSS---------------------------S----------
--------------------------------------------------------------S--------S--------
--------S--------------------------SSS---------SS--S-SSSS-----------------------
--------------------------------------------------------------------------S-----
--------------------------S------------------S----------------------------------
-----------------------------------------------S--------------------------------
--------S-----------------------------------------------------------------------
--S---------------------------------------------S-------------------------S-----
----------------------------SSSSSSSSSSSSSSSSSSSSSSSS----------------------S-----
--S-------------------------S----S------S--------------S-SS--SSSSSSSSSSSSSSS---S
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
--------------------S----------------S------------------------------------------
--------S--------------------S----------------------------------------S--------S
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
-------------S---------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
-----S--------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S------------------S---------------------------------------------S------------
--------------------------------------------------------------------------------
-----------------------------------S-----------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S---------------------S-------
-------------------S--------------------------S-------------S-------------------
-------------------------S--S--------------------------------------S------------
----------------S---------------------------S--------S---S------------SS--------
----------S------SSSS-----------------------------------------------------------
-------------------------------------S------------------------------S-----------
--------------------------------------------------S----------------------------S
--------------------------------------------------------------------------S-----
---------------------------------S-------------------S--------------------------
--S----------------------------------S---------------------------S--------------
-----------------------------------S------------------------S------S------------
--S--------------
>forward_870
--------------------------------------------------------------------------------
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--------------------------------------------------CTGGATGAACGACGTCAGCT----------
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-----------------
>reverse_2989
--------------------------------------------------------------------------------
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----------------------------AGGCAACGTGTTCTAAGGGT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------
