>input_sequence_60081
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----------------------------------------ATGGCCTTGCAGCGCCCCGCCCCGGCTACTCCCCTCCCCA
CATGCCATCACCGCCAGAACGCCGGCGTGCTCCTCCAGCGGCCATCCCGGCGCCGTTTCCGGCCGAACGCGCAGAAAAAA
CCCGGGTCC----------GCGAGCCCGCGCACCGGCACGCCGTCCGGCTCCGAGTCGGACAACGTGGTCCTCAAGGCCG
CCTGGTACGGCTCCGAGGCCCTCGGCATCGCTGCGTCCTTCTTCCGGCCGCCGTCTCCTGAGGCCGACGCCGGTGCTACA
GACGACGGCCCGTCGGAGTTCCAGCCCGTTGGCCGCGCGCAGGTCGCCGAGGCCATCAAGGATGACTTCGCGCGGTCATA
CTTCGTCACAGGTCAGGAATTGAGCTCTACACGT----TTAT-------------ACTGCTGCACGTTTGCGGTTT-GTT
CACGTTCGCACTGCAGGAAACCTCACGCTCGGGGCCTACGAAGACGACTGCGAGTTCGCCGACCCGGCGGGTTCATTCAG
AGGCCTGCAACGCTTCAAGAGGAACTGCACCAACTTCGGGTCACTGCTGGAGAAGTCCAACATGAAGCTAACGAGATGGG
AGGATGTCGAGGTAC------ATTTCCCGTGTCAGTCAGTCGATCTT-----TACAGCAGCAAAGTGGTGAGTTGTTT-C
-GCCAATTCATCGGG-TCTG------CTGGGTGCAGGACAAATCGATCGGGCACTGGCGTTTCAGCTGCGTCATGTCGTT
CCCGTGGAGGCCCATTCTCTCCGGTAAGTTCGTGAGGACGCGCTCTGTATCTGTATCAGCAGATCGACACCTCGTTCGGC
CCGGCCGGTGCAAAACTGCAAAATGCATCGCTCCTGTACCGAA----------------CATGTTTTTGGTCTCACAGTA
CTATTTTTCAC-TTTTCAGCAACCGGGTACACGGAGTACTACTTCGATGCCGAGTCGGGGAAGGTGTGCAGGTACTCACT
CACTCGGTTGTTCCATGAGCTTATCGTGTGCACGAGATCCATGTGTTGCGAGTCTGGTGAGTGGTGATTGACAGATACAG
TTGGGTTGTTGTTCAGGCATGTCGAAAACTGGAACGTCCCCAAGATGGCGCTCCTGCGGCAGATATTCAGGCCCAGCAGA
TGGGTATGGGAGAAAGAGAAACGCTAG-----------------------------------------------------
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>chr2D_1_TraesCS2D01G394100
GCTGATGTCGCATCCGTTGCCTCCGTCGCTTGCGCAGATCTGAGTCGTCGCCGCCGCCGCCGTCGGTGGTGAGACTAGAG
GAAGTGGCTGTCCTAGTGGTAGTGGTGACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTAAATTGGGGGGGGGGGGAGGGGGGGCTAGATTTGGCGCCGCACCGCGCCGCCGCGTCCGATTTCCACCTCCCG
CCATCCCCACTATCTTGCGCCGCACTTAGCCTGGTTCGCTGAAAATTGCCAATTTGAGGGTTTCCAGCAAACCAGACTTT
GGGCTGCTTTAAGGTTCGTGCCGATGCGAGCTAACCCATCCCGTATATAACCAAACACACTTTTCTTGGTCCAACTTAGC
CTGGTTGTACCTAATGCAGGCAACCTAACACGCCCAAAAACTCCTACACATACTACGAACATGACGTCGACCGAGACTTT
GCTAAATCTTAGTCAGACTCAGATCTAGGAAAGCTGATTATCTTTTGAGCTGGGGCGTTGTTGCAATAAATATCGAGAGC
GTGGTCTGAATTTTGCGCGCTTGTGTTGGTTGCTATTCGACGAATGTGTGAGCTTCAAAACTCGGTGTAGTAACTGTCCA
GATCTTCTATGTCATTGTAACCACACATTCGAGAGTGAAGAAAATCCATCTCTCCCGCGTTTAATCCCAACCTCACACTC
GAATGGTAAGAGAGTCTAGCAGGTAAGAACAGAAGATGCCAAGGCCAAACAAGTGGCTGTGCGCCTGTGCCACTCCTCTG
CCCCTAGACTGTTGGCCCGGCCGGAGCTCCGGCAAAAGGAATGGCCTTGCAGCGCCCCGCCCCGGCTACTCCCCTCCCCA
CATGCCATCACCGCCAGAACGCCGGCGTGCTCCTCCAGCGGCCATCCCGGCGCCGTTTCCGGCCGAACGCGCAGAAAAAA
CCCGGGTCC----------GCGAGCCCGCGCACCGGCACGCCGTCCGGCTCCGAGTCGGACAACGTGGTCCTCAAGGCCG
CCTGGTACGGCTCCGAGGCCCTCGGCATCGCTGCGTCCTTCTTCCGGCCGCCGTCTCCTGAGGCCGACGCCGGTGCTACA
GACGACGGCCCGTCGGAGTTCCAGCCCGTTGGCCGCGCGCAGGTCGCCGAGGCCATCAAGGATGACTTCGCGCGGTCATA
CTTCGTCACAGGTCAGGAATTGAGCTCTACACGT----TTAT-------------ACTGCTGCACGTTTGCGGTTT-GTT
CACGTTCGCACTGCAGGAAACCTCACGCTCGGGGCCTACGAAGACGACTGCGAGTTCGCCGACCCGGCGGGTTCATTCAG
AGGCCTGCAACGCTTCAAGAGGAACTGCACCAACTTCGGGTCACTGCTGGAGAAGTCCAACATGAAGCTAACGAGATGGG
AGGATGTCGAGGTAC------ATTTCCCGTGTCAGTCAGTCGATCTT-----TACAGCAGCAAAGTGGTGAGTTGTTT-C
-GCCAATTCATCGGG-TCTG------CTGGGTGCAGGACAAATCGATCGGGCACTGGCGTTTCAGCTGCGTCATGTCGTT
CCCGTGGAGGCCCATTCTCTCCGGTAAGTTCGTGAGGACGCGCTCTGTATCTGTATCAGCAGATCGACACCTCGTTCGGC
CCGGCCGGTGCAAAACTGCAAAATGCATCGCTCCTGTACCGAA----------------CATGTTTTTGGTCTCACAGTA
CTATTTTTCAC-TTTTCAGCAACCGGGTACACGGAGTACTACTTCGATGCCGAGTCGGGGAAGGTGTGCAGGTACTCACT
CACTCGGTTGTTCCATGAGCTTATCGTGTGCACGAGATCCATGTGTTGCGAGTCTGGTGAGTGGTGATTGACAGATACAG
TTGGGTTGTTGTTCAGGCATGTCGAAAACTGGAACGTCCCCAAGATGGCGCTCCTGCGGCAGATATTCAGGCCCAGCAGA
TGGGTATGGGAGAAAGAGAAACGCTAGAACGTGACCGAAGATCCGTCCACCTATGCTCAGGTTACGTTAGGAGGGCAAAC
GGGCGTGACGAGTTTGTTGCTTCCTTTGTTGCTCGCTTGGTACCGCAGCGCCCAGTTTGTAAACTATAGCGTGCACTCTG
AGAGTACATGGAAGTTTTTCCGGACAACATACGAGTGTAACTTGTTCGAGTTCCGTATGATCATCAAAACTCAAAAGGGG
TCTATCAGCAAATCGCTTAGTGCAACTTCAACGGGGCAACTCATTTCGTCCGCTGGCGTCCGTTTGGGTCGGCGGAGACA
CAAAAGTCGGCCCAACGCGCCGACCCAAAC-GGACGCGCGTCCGCTTGGCGTCCGCCTGCCGACCCATTCCCGG-CCCAT
TTTTGAGCCAG--TTTGCGTCGGCACACACACGAGACGGACGCGCGCGCAC--GC----CTTCTACT-CCCCCCGGGCCC
GCTGGTTGGTGGCAGCCTCCACCATTTCCCTCCATTTCTCCC--AAAAATCCTCCTGCC--CGCA-CGCTCCCC-----C
CCGCCCCCGTCATGGACGACG------------------ACCTCACC------GCCGC---------CGCCGG-------
--CCTCGCCTCGTCCGGCATGATGACCGTCCCCTCCGGCAAAGGCAAGCTTCGCGCCCCCCGCAAGACCGCCGCCGCGCC
CAAGCCGAAGAAGACGTTGACGCCCGAACAACGGGCAAAGGAGTCGGCCAAGAGTAAGGGTCGGAGGCACGCGGCGGACG
CGAGGGATGAAGCCATCGAGGCGGCCACCGTTGCCGTCACCGCGCAGCAGGAGGTCACCAGCGCCCGCGTCGCGGCGGCA
ACGAGCGAGGCGCTCTATATGCTAGGGTTAAACCCTAGCCAGCACGGCCTCGTCAACGCCGCCGTGGCCGCG---GCCAG
CACCGGCTCATCCGCGT-TCCCTCGGA-GGTGCTGCCCGACTCGCCCCGCGTGTTGGCTT-GCAC-CCCGATGCCCGACT
TCCACATCTACTCGCAGGCTGTTGGGGAACGTAGTATTTCAAAAAATTTGTCTACGA
>chr2A_791
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----------------------------------------------------------------------TAACTGTCCA
GATCTACTATGTCATTGCAACCACACATTCCAGAGTGAAGAAAAACCATCTCTCCCGCGTTTAATCCCAACCGCACACTC
GAATGGTAAGAGAGTCTAGCAGGTAAGTACAGAAGATGCCAAGGCGAAACAAGTGGCTGTGC--------CACTCCTCTG
CCACTAGATTGTTGGCCCGGCCGGAGCTCCGGCAAAAGGAATGGCCTTGCTGCACCCCGCCCCTGCTACTCCCCTCCCCA
CCGGCCATCACCGCCAGAACGCCGGCGTGCTCCTCCAGCGGCCATCCCGCCGCCGTTTCCGGCTGAACGCGCAGAAAAAG
CCCGGGTCCACGTCCACGAGCGAGCCCGCGCACCGGCACGCCCTCCGGCTCGGAGTCGGACAACGTGGTGCTCAAGGCCG
CCTGGTACGGCTCCGAGGCCCTCGGCATCGCCGCGTCCTTCTTCCGGCCGCCGTCTCCGGAGGCGGACGCCGGCGCTGCA
GGCGACGGCGCGTCAGAGTCCCAGCCGGTTGGCCGCGCGCAGGTCGCCGAGGCCATCAAGGACGACTTCGCACGGTCATA
CTTCGTCACAGGTCAGGAATTAAGCTCTAGATCAGCAAGTAAACTGTACTACAGCACTACTACACGTTTGCGGTTTTGTT
CACGTTTGTATTGCAGGGAACCTGACGCTGGGAGCGTACGAAGACGACTGCGAGTTCGCCGACCCGGCGGGCTCATTCAG
AGGCCTGCAGCGCTTCAAGAGGAACTGCACCAACTTCGGGTCCCTGCTGGAGAAGTCCAACATGAAGCTAACCAAATGGG
AGGATGTCGAGGTACTAGCACATTTCCAGCGTCAGTCAATCGATCTTACTGCTACAACAGCTAA-TGGTGCGTTGTTTTC
TGCCGGTTCATCGACCTCTG------CTGGGTGCAGGAGAAATCGATCGGGCACTGGCGTTTCAGCTGCGTCATGTCGTT
CCCGTGGAGGCCCATTCTCTCCGGTAAGTTCGTGACGACGCGCTATGTATCTGCATCAGCAGATCGACACCTCGTCCGGC
CCGGCCGGTGCG-AACTGCAAAATGCATCGCTCCTGTGCTGAACATGTTT----------------TTGGTCTCGTTGAA
ATATTTTTCACTTTTTCAGCAACCGGGTACACGGAGTACTACTTCGATGGTGAGTCGGGGAAGGTGTGCAGGTACTCGCT
CACTCCGTCGTTCCGTGAGCTTATCGTGTGCACGAGATCGATGTGCTATGAGTC-------TGGTGATTGACAGATACAG
TTGGTTTGTTGTTCAGGCATGTGGAGAACTGGAACGTCCCCAAGATGGCGCTCCTGCGGCAGATATTCAGGCCCAGCAGA
TGGGCATGGGAGAAGGAGAAACGGTAAAACTTGAGCAAAAATCCGTCCACCTATGCTCAGG-------------------
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>chr2B_800
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-------------------------------------------------------------------------------A
GATCTACTACGTCACTGTAACCACACATTCCGGAGTGAAGAAAATCCATCTCTCCCGCGTTTAATCCCAACCTCACACTC
GAACGGTAAGAGAGTCTAGCAAGTAAGTACAGAAGACGCCAAGGCCAAACAAGTGGCTGTGC--------CACTCCTCTG
CCCCTAGACTGTTGGCCCGGCCGGAGCTCCGGCAAAAGGAATGGCCCTGCTGCACCCCGCCCCGGCTACTTCCCTCCCCA
CCTGCCATCACCGCCAGAACGCCGGCGTGCTCATCCAGCAGCCATCCCGCCGCCGTTTCCGGCTGAACGCGCAGAGAAAG
CCCGGGTCCACGTCCA----CGAGCCCGCGCACCGGCACGCCCTCCGGCTCGGAGTCGGACAACGTGGTCCTGAAGGCCG
CCTGGTACGGCTCCGAGGCCCTCGGCATCGCCGCGTCTTTCTTCCGGCCGCCGTCTCCGGAGGCGGACGCCGGTGCTGCA
GACGACGGCACGTCGGAGTCCCAGCCCGTTGGCCGCGCGCAGGTCGCCGAGGCCATCAAGGATGACTTCGCGCGGTCATA
CTTCGTCACAGGTCAGGAATTAAGCTCCACGCGTTTTATTAT-------------ACTACTGCACGTTTGCCGTTT-GCT
TACGTTCGTACTGCAGGGAACCTCACGCTCGGGGCGTACGAAGACGACTGCGAGTTCGCCGACCCGGCGGGTTCATTCAG
AGGCCTGCAACGCTTCAAGAGGAACTGCACCAACTTCGGGTCCCTGCTGGAGAAGTCCAACATGAAGCTGACCAAATGGG
AGGATGTCGAGGTAC------ATTTCCCGCGTCAGTCAATCGATCTT-----TACAGCAGCGAAGTGGTGAGTTGTTTTC
-GCCGATTGATCGAC-TTTGCTGGGTCTGGGTGCAGGACAAATCGATCGGGCACTGGCGTTTCAGCTGCGTCATGTCGTT
CCCGTGGAGGCCCATTCTCTCCGGTAAGTTCACGGCTACGCGCTCTGTATCTGTATCAGCAGACCGACACCGCGTTTGGC
CCGGCCGGTGCAAAACTGCAAAATGCATCGCTCCTGTACTGAACATGTTTTCAGTACTGCATGTTTTTGGTCTCATTGTA
CCATTTTTCAC-TTTTCAGCAACCGGGTACACGGAGTACTACTTCGATGCCGAGTCGGGGAAGGTGTGCAGGTACTCACT
CACTCCGTCGTTCCAGGAGCTTATCGTGTGCACGAGATGCATGCGTTGCGAGTCTGGTGC-------TTGACAGATACAG
TTGGGTTTTTGTTCAGGCATGTCGAAAACTGGAATGTCCCCAAGATGGCGCTCCTGCGGCAGATATTCAGGCCGAGCAGA
TGGGTATGGGAGAAAGAGAAACGCTAGAACGTGAGCGAAGATCCGTCCGCCTATGCTCAGGTCACGTCAGGAGGGCAAAG
GGGCGTGGCGAGTTTGTTGCCTCCTTTGTTGTTCGTTTGGTAC-------------------------------------
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>chr2B_2341
CAGCAGG-------------------------------------------------------------------------
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-----------ATCGATTAGAGCAATTTCAATGGGGCGACCCATTTCGTCTGTCCGCGTCCGTTTGGGTCGGCGCGGACA
AAATCGGCGGCCCAACGCGCCGACCCAAAC-GGACGCGCGTCCTTTTT-TGTCCGCG-GGCAACCCATTCCCGGTCCAA-
-TTTTGAGCCTGATTTGCGTCGGCGCGGACATGAGACGGGGGCGCGCGCGCCTACTCTTC--------TCCCC-GGGTCC
GCCGGTCGGTGGCAGCCACCACCATTTTCCCCAATTTTCCCC--AAAAACGCACCCATCCGCGCG-CGCTCGCT-----C
CCGCCCCAACCATGGACGACGTCATCAACCTCGACCTCGACCTCGCA------GCCAC---------CGCCGGCCTCGCC
TCCCTCGCCTCGTCCGGCGCCGT---CGCCCCCTCCGAGAAAGACAAGCCTCGTGCCCCGCGCAAGACCGCCGCCGCGAC
CAAGCCGAAGAAGGCGCTGGCGCCCGAACAACGGGCAAGGAAGTCGGCCAAGAGGAAGGGCCGGAGGCACGCCGCGGACG
CGAGGAATGAGGCCGCCGCGCAGGCCGCCGTCGTGGCGGCCGCGCAGCAGGAGTTCACCAATGCCCGCGTCGCGGCGGCA
ACGAGGGAGGCGCTCTACATGCTAGGGGTAAACCCTAGCCAGCACGGCCTCGTCCAAGCCGCCGTCGCCGCG---GCCAA
CACCGGCTCATCGGTGC-TTCCTCGGATGGTGCTGCCTGAGTCACCCCGCGCGTCGGCTT-GCAA-CCCGGTCCCCGGCT
TCCACGTCTACCCACAGGC--------------------------------------
>chr7D_2350
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--------------GCTTAGAGCAACTGCAACGGGGCGACCCATTTCGTCCGCGGGCGTCCATTTGGGTCGGCGCGGACA
GAAAAGTCGGCCCAACACGCCGACCCAAAC-GAACGTGCGTCCGCTTTTCGTCCGCCTGCCGACCCATTCCCGG-CCCAT
TTTTTGAGCCGGATTTGCGCCGGCGCGGACACAAGACGGACGCGCGCGCTC--AC----CTTCTCCT-CCCCC-GGGCCC
GCTGGTCGGTGCCCGCCTCCACCATTTCCCTCCACCCCCC------AAAACCCTC---CCACCCG-CACGGGCT-----C
CCGCCCCCGCCATGGACGACG------------------ACCTCGAC------GCCGC---------CGCCGGCCTCGCC
TCCCTCGCCCCGTCCGGGATGACGACCGCCCCCTCCGGCAAAGGCAAGCCTCGCGCCCCCCGCAAGACCGCTGCCGCGCC
CAAGCCGAAGAAGACGCTGACGCCCGAACAACAGGCAAGGGAGTCGGCCAAGAGGAAGGGCCGGAGGCACAGGACGGACG
CGAGGGATGAAGCCATCGCGGCGGCCGCCGTCACCGCCGCCGCGCAGCAGGAGGTCACCAATGCCCGCGTCGTGGCGGCA
ACGAGGG-GGCGCTCTATATGCTAGGGTTAAACCCTAGCCAGCACGGCGTCGTCAGCACCGCCGTGGCCGCG---GCCAG
CACCGGCTCATCCGCGT-TCCCTTGGATGGTGCTGCCCGACTCGCCCCGCGCGTCGGCTT-GCAC-CC-GATGCCCGGCT
TCCACGTCTACCCGCAGGC--------------------------------------
>chr3B_2352
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----------------TTAGAGCAACTCCAACAGGGCTACTTATTTCGTCCGCTGCCGTCCGTTTGAGTCGGCGCGAACA
CAAAAGTCGGCCCAACGCGCCGACCCAAAT-GGACGCGCGTCCGCATGGCGTCCGCCTGCCGACCCATTCCCAG-CCT-T
TTTTTGAGCCGGATTTGCGTCGGGGCGGACACAAGGGGGACGCGCGCGCGC--GC----CTTCTCCCTTCGCT-GGGCCC
GCTGGTCGGTGGCAGCCTCCACCATTTTACTTCATT-CCCC-CCAAAACCCTC-C---CG-CCCG-CCCGCGCTCCTGCC
CCACCCCCGCCATGGACGGCG------------------ACCTCGAC------GCAGC---------CGCCGGCCTCGCC
GCCCTCGCCTCGTCCTGCATGCCGACCGCCCCCTCCGGTAAAGGCAAGCCTCGCGTCCCCCGCAAGACCGC---CGCGCC
CAAGCCGAAGAAGGTGCTGACGCTCGAACAACGGGCAAAGGAATCGGCCAAGAGAAAGGACCGGAGGCACGCGGCGGACG
CGAGGGATGAAGCCATCACGGCGGCCGCCGTCGCCGCCGCCGCGCAGCAGGAGGTCACCAACGCCCGCGTCGCGGCGGCA
ACGAGGGATGCGTTCTATATGCTAGGGTTAAACCCTAGCCAGCACGGCCTCGTCAAAACCGCCGTGGCCGCG---GCCAG
CATCGGCTCATCCACCT-TCCCTCGGATGGTGCTGCCCGACTTGCCCCGCGCGTCGGCTT-GCACCCC-GGTGCTCGGCT
TCCACGTCTACCCGCAGGC--------------------------------------
>chr2D_2354
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------------------AGGGCAACTCTAACGGGGCGATCCATTTCGTCCGCGGACATTCGTTTGGGTCAGCGTGGACA
CAAAAGTCGGCCCAACGCGCCGACCCAAAC-GGATGCGCGTCCACTTTTCGTCCACCTGCCGACTCATTCCTGG-CCCA-
-TTTTGAGCCGGATTTGCATCGGCGCGGACAAGAGACAGACGCGCGCGCTC--GC----TTTTTCCT-CCCCC-AGGCCC
GCTGGTCGGTGGCAGCCTCCACCATTTCCCTTCATCCCCCC-TCCAAAAATCCTC---GCGCCCG-CGCGCGCT-----C
CCGCCCCCGCCATGGACGACG------------------ACCTCGTC------GCCGC---------CGCCGGCCTCGCC
TCCCTCGCCTCGTCCGGCATGATGACCGCCCCCTCCGGCAAAGGCAAGCCTCGCGCCCCCCGCAAGACCGCCGTCGCGCC
CAAGCCGAAGAAGACGCTGACGCCCGAACAGCGCGCAAGGGAGTCGGCCAAGAGGAAGGGCCGGAGGCACGCGGCGGCCG
CGAGGGAGGAAGCCATCACGGCGGCCGTCGTCGCCGCCGCCAGGCAGCAGGAGGTCACCAACGCCCGCGTCGCGGCGGCA
ACGAGGGAGGCGCTTTATATGATAGGGTTAAACCCTAGCCAGCACGGCCTCGTCAACGCCACCGTGGCCGCG---GCCAG
CACCGGCTCATCCGCGT-TCCCTCGGATGGTGCTGCCCGACTCGCCCCGCGCGTCGGCTT-GCACCCC-GATGCCCGGCT
TCCACGTCTACCCGCAGGC--------------------------------------
>chr3D_2354
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------------------AGAGCAACTCCAACAGGGCGACCCATTTCGTCCGCAGGCGTCCGTTTGGGTCGGCGCGGACA
GAAAAGTCGGCCCAACACGCCGACCCAAAC-GGACGCGTGTCCGTTTTTCGTCCACCTGCCGACCCATTCCCGA-CCC-A
TTTTTGAGCCGGATATGCGTCGGCGCGGACACGAGACGGACGCGCGCGCGCTCTC----CTTCTCCT--CCCCCTGGCAC
GCTGGTCGGTGGCAGCCATCACCATTTCCCTCCATTTGCCC-CAAAAACCCTC-C---CG-CCTG-CGCGCGCTCCCGCG
G----CCCGCCATGGACGACG------------------ACCTCGAC------GCCGC---------CGCCGACCTTGCC
TCCCTCGCCTCGTTCGGCATGATGACCGTCCCCTCTGGCAAAGGCAAGCCCCGCG-CCCCCGCAAGACCGCCGTCGCGCC
CAAGCCGAAGAAGATGCTGATGCCCGAATAGCGGGCAAGGGAGTCAGCGAAGAGAAAGGGTCGGAGGCACGCGGCGGATG
CGAGGGACGAAGCCATCGCGGCGGCCACCGTCGCCGCCGTCGTGCAGCGGGAGGTCACCAACGCCCGCGTCGCGGCGGCA
ACGAGGGAGGCACCATATATGCTAGGGTTAAACCCTAGCCAGCACGGCCTCGTCAACGCCGCCGTGGCCGCG---GCCAG
CACCGGCTCATCTGCGT-TCCCTCGGATGGTGCTGCCCGACTCGCCCCGCGCGTCGGCAACGCAG-CT-GATACCCGGCT
TCCACGTCTACCCGCAGGC--------------------------------------
>chr6D_2354
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------------------AGAGCAACTCCAACGGGGCGATCCATTTCATCCGCGGGCGTACATTTGGGTCGGCGCGGACA
GAAAAGTCGGTCCAACATGCCGACTCAAAC-GGACACGCGTCCGCTTTTTGTCCGCCTGCCGACCCATTCTCGG-CTC-A
TTTTTAAACCAGATTTGTGTCGGCGCAGACACGAGACGGACGCGTGCGC--TCGC----CTTCTCCT--CCCCCAGGCCC
GCTGGTCGGTGGCAGCCTCCACCATTTCCCTTCATTTCCCT-CAAAAACACTC-C---TG-CCCGCCGCGCGCTCCCGCC
G----TCCGCCATGGACGACG------------------ACCTCGAC------GCCGC---------CGCCGGCCTCGCC
TCCCTCGCCTCGTCTGGCATGACGACCGCCCCCTCCGGCAAAGGCAAGCCTCGCGCCCCCCGCAAGACCGTCGCCGCGCC
CAAGCCAAAGAAGACGCCGACGCCCGAACAGCGGGCAAGGGAGTCAGCGAAGAGAAAGGGGCGGAGGCACGCGGCGGACG
AGAGGGACGAAGCCATCACGACGGCCGCCGTCGCCGCCGCCACGCAGCAAGAGGTCACCAACGCCCGCGTCGCGGCGGCA
ACGAGGGAGGCGCTATTTATGCTAGGGTTAAACGCTAGCCAGCACGGCCTCGTCAACGCCGTCGTGGCCGCG---GCCAG
CACCGGCTCATCCGCGT-TCCCTCGGATGGTGCTGCCCGACTTGCCCCGCGCGTCGGCGACGCAG-CC-GATACCCGGCT
TCCACGTCTACCCGCAGGC--------------------------------------
>chr4A_2354
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------------------AGAGCAAC-TCCAATGGGCGACCTGTTTCGTCCGCTGGCGTTCATTTGGGTCGGCACGGACA
TAAAAGTTGGCTCAACGCGCCGACCCAAAC-GGACGCGTGTCCGTTTTTTGTCCGCG-GGCGACCCATTCCCGG-TTC-A
TTTTTTAGCCGGATTTGCGTCGACGCGGACACAGAGAC-GGGCGCGCGCGCTTACTCCTC--------CCCCC-GGACCC
GCTGGTCGGTGGCAGCCTCCACCATTTCCCTTCATTTTCCGC--AAAACCCTC-C---CA-CCCG-CGCGCGCTCCCGCC
CCACACCCTCCATAGACGACA------------------ACCTCGACCTTGGCGCCGC---------CGCCAGCCTCGC-
--------CTCGTCCGGCATGGCGACCGCCCCCTCCGGCAAAGGCAAGCCTCGTGCCCCGCGCAAGACCGCCGCCATGCC
CAAGCCAAAGAAGATGCTGACTCCCGAACAATAGGCAAGGGAGTCGGCCAAGAGGAAGGGCCGGAGGCACGCCGCCGACG
CGAGGGATGAAGCCGCCGCGGCTGCCGCCGTCGCCGCCGCCGCGCAGCAGGAGGTCACCAACGCCCGCGTCGCGGCGGCA
ACGAGGGAGGCGCTCTATATGCTAGGGTTATACCCTAGCCAGTACGGCCTTGTCAACGCCGTCGTGGCCGCCGCAGCCAG
CACCGGCTCATCCGCGT-TCCCTCGGGTGGTGCTTCCCAACTCGCCCCGCGCGTCGGTTT-GCACCCC-GATGCCCGGCT
TCCACGTGTACCCGCAGGCT-------------------------------------
>chr3D_2357
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---------------------GCAACTTTAACAGGGCGACCCATTTCGTCCTCTGGCGTCCGTTTGGATCGGCGCGGACA
CAAAAGTCGGCCCAACGCGTCGACCCAAAC-GGATGTGCCTCCGCTTGGCGTCCGTCTGCCGACCCATTTCTGG-CCT-A
TTTTTGAGCCGGATTTGCATCGGCGATGACACGAGACGGACGCGCGCG----CGC----CTTCTCCT--CCCCCAGGCCC
GCTGGTCGGTGGCAGCCTTCACCATTTTCCTTCATTTTCCT-CAAAACCCCTC-C---CG-ACCG-CGTGCGCTCC--CC
CTCCCCCCGCCATGGACGACG------------------ACCTCGAT------GCCGC---------GGCCTGCCTCGC-
--------CTCGTCCGGCATGACAACCGCCCCCTCCGGCAAAGCCAAACCTCGCGCCCCCCGCAAGACAGCCGCCACGCC
CAAGCCGAAGAAGACGCTGACGCCCGAACAACGGGCAAGGGAGTCGGCCAAGAGGAAGGGCCGAAGGCACGCGGCGGACG
CGAGGGATGAAGCCATCGCGGCGGCCGTCGCCGCCGCCGCCGCGCAGCAGGAGGTCACCAACGCCCGCTTCGCGGCGACA
ACAAGGGAGGCGATGTACATGCTAGGGTTAAACCCTATCCAGCACGACCTCGTCAACGCCGTTGTGGCCGCG---GCCAA
CACCGACTCATCCGCGT-TCCCTCGGATGGTGCTGCACAATTCGCCCCGCGCGTCGGCTT-GCACCCC-AATGCCCGGCT
TCCACGTCTACCCGCAGGC--------------------------------------
>chr5A_2357
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---------------------GCAACTTCAACTGGGCGACCCATTTCATCCGCGGGCGTCTGTTTGGGTCGTCGCGGACA
GAAAAGTCGGCCTAACGCGCCGACCCAAAA-AGACGCGCGTCCGCTTTTCATCCGCCTGCCGACTCATTTATGT-CTC-A
TTTTTGAGCCGGATTTGCGTCGGCGCGGACACGAGACGGACGCGCGCA----CGCTCACCTTCTGCT--CCCCCTGCCCC
GTTGGTCGGTGGCAGCCTCCACCATTTCCCTTCATTTTCCCCCAACAACCCTC-T---CG-CCCG-CGCGCGCTCC--CG
--CCACCCGCCGTGGATGACG------------------ACCTCGAC------GCCGCCGTCGGCCTCGCCTCCCTCGC-
--------CTCGTCCGGCATGACAACCGCCCCCTCTGGCAAAGGCAAGCCTCGTGCCCCCCGCAAGACCGCCGCCGCGCC
CAAGCGGAAGAAGACGCTGACGCCCGAACAACGG-CAAGGGAGTCGGTGAAGAGGAAGGGCTGGAGGCACGCTGCGGACG
CGAGGGACGAAGCCATCGCGGTGGCCGCCGTCGCCGCCACCGCGCAGCAGGAGGTCACCAACGCCCGCGTCGCGGTGGCA
ACGAGGGAGGCGCTATATATGCTAGGGTTAAACCCTAGCCAACACGGCCTCGTCAGCGCCGCCGTGGCCGCG---GCCAG
CACCGGCTCATCCGCGT-TCCCTCGGATGGTGCTGCCCGACTCGCCCCACGCGTCGGCAACGCAG-CC-GATACCCAGCT
TCCACGTCTACCCGCAGGC--------------------------------------
>chr5B_2358
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----------------------CAACTCCAACGAGGCGACCCATTTCGTCCGCTGGCGTCCTTTGGGTCGATGC--AACA
TAAAAGTCGGCCCAACGCGCCGACCCAAAACGGACGCGCGTCCGCGTGGCGTCCGCCTACCGACCCATACCCAG-CCC-A
TTTTTGAGCCGGATTTGCGTTGGCGCGGACACAAGACGGACGCACGCGCGCCTCCTCCTC---------CCCCCGGGCTC
GCTGGTCGGTGGCAGCCTCCACCATTTTCCTCCATTTCCCC-AAAAAAAAACCTC---CC-CCCG-CGCGCGCTCCCGCC
C-ACCCCCGCGATGGACGACG------------------ACCTCGAC------GCCGCCGTCGGCCTCG---------C-
--------CTCGTCCGACGTGACGACCG-CCCCTCCGGCAAAGGCAAGCCTCGTGCCCCCCGCAAGACCGCCGCTGCGCC
CAAGCCGAAGAAGGCGATGACGCCCGAACAGCGGGAAAGGGAGTCGACCAAGTGGAAGGGCCGGAGGCACGTGGCGGACG
CGAGGGATGAAGCCATCGCGGCGGCCGCCGTCGCCGCTGTTGCGCAGTAGGAGGTCACCAACGCTCGCATCGCGGCGGCA
ACAAGGGAGGCGCTCTATATGCTAGGGTTAAACCCTAGCCAGCACGGCCTCGTCAACGCCGTCGTGGCCGCG---GCCAA
CACCGGCTCATCCATGTGTCCCTCGGATGGTGCTGCCCGACTCGCCCCATGCGTCGGCTT-GCACCCC-GATGCGGCACT
TCCACGTCTAC----------------------------------------------
>SNPs
SSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------
-----S------------------------S-------------------------------------------------
---------------------------S----------------------------------SSSSSSSS----------
--------------------------------------------------S--S--------------------------
-S-----------------------------------------------S-------------S---------------S
------------------------------------------S--------S----------------------------
-------------------------------S--------------------------S-----S------------S--
---------S---------S------------------------------------------------------------
---------------------S------------------------------------S---------------------
--------S--------S-----------------S--------------------------------------------
------------------------------------------S-----------------------------S-S-----
-----------------------------S--------S----------------------S------------------
----S--------SS-----------------------------------------------------------------
-----------------------------------S--------------------------------------------
---------------------------------------S-----------------------------------SS---
--------------------------------------------------------------------------------
-----S--S--------------------------------------------------SS-------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------S----S-----------S
-------S------------S----------S---S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS---------S----------------S------------------------------------SS----
--------------------------------------------------------------------------------
----S-SS-S--------------S--S---------------------S--------------S---------------
------S-------------------------------S----------S--S--SSS------S------S-S------
---------S----------------------------------S-----------------------------------
-------------------------------------------------S------------------------------
----------------S-------------------------------------S-------------------------
------------------S------------S----S-----------------------S-------------------
-----S--------------------------------------------------------------------------
---------------------------------------------------S--S-------------------------
-----S-----S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_442
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----------------------CACTTAGCCTGGTTCGCTGA--------------------------------------
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>reverse_2476
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---------------------------------------------------------------------------AGACA
CAAAAGTCGGCCCAA-----------------------------------------------------------------
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