>input_sequence_60080
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ATGGTTGCGGTGATGGAGGTGCGTCCACA---CCTCCTCCTTGTCCTTCTTTGCCTCCTTGGCGCCGGCGCCGGCGCGGG
GATGGCGCAGTCTTTGCCGCCGGCGCCGGTGCCGCAGTCCGGGGT---GGCGGCGGCGCCGAGGCCCACGCCGTTCGGGC
GCACCATGTCGACGGTCATCACCGTCGCCATCAGCGTCTTCTTCTTCCTGCTCTTCTTCTGCGCCTACATCAACCAGTGC
CGCCTCGCCGAGA---ACGCCGCGCCGCAGGGGGCCAACGCCGCCGCGGCCGGGGCCGGGGCGTCCAGGAGGGGGAAGCG
CGGGCTGGACCCGGCGGTGGTGGCCACGTTCCCGATCATGCAGTACAGGGAGATCAAGGAGCACAAGATCGGCAGGGGCG
TGCTGGAGTGCGCCGTGTGCCTCACGGCGTTCGAGGAGGCCGACGACCTCCGGCTGCTGCCGCACTGCTCGCACGCCTTC
CACCCCGAGTGCATCGACCCCTGGCTCGAGGCGCGGATCACGTGCCCGCTGTGCCGCGCCAACCTCGAGAAGCCGCCGCC
GCC------------CGCCGTGGCGCCCCCGTCGCCCGAGCAGGTGGCGCGGCATCAGCCCTCGCCATCGCCGTCGCCGC
CGCACGCCGTGGCGATACCGGTGCGGGAAG------AGGAGGAGGAGGAGAGCGACGAGGACGACAGGAAGGAGGAGGCG
ATGGAGCTGGAGATGCTGCGCAGCGAGCGGCGGGCGGCGAGGCTGCCGAGATCGCACTCGACGGGGCACTCGCTCTTCGC
GGCGTCTGCCGCCGCCGCCGAGCGGAGCGACCACGAGAGGTTCACGCTGCGGCTGCCGCACCACGTGAGGGAGCAGGTGC
TGAGGTCGCGCCGCCTGCGCCACGCCACCAGCCTGATCGACTTCGCCGGAGCGAGCCCCGAGGGGAGCGTGCGCGGAGGC
CGGCCCGCGG------------GCGGCAGCAGACACGGCGGGCGGCGGTGGCAGGCGTTCCTGGCGAGGACGATGTCGTG
GGCCCGAGGGGGAGGCGACGGGTCGGTGCGGAAGGGGTGGGACGGGTCCACTCGGAGGGGAAGGGACGACGCCGAGTCGA
GCAGAAAGGGGGCCGCTTCGCCGGCGG------CGGCGCGGCCATGA---------------------------------
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>chr2D_1_TraesCS2D01G315800
GTACGAGAATAATGGACTCTGGAACAGTTTATGCTTTATTTTGGCAAATACAATCTGACTATATTGTCAGGTCCAGCGCC
GCATTATCGAAAGAACTATATTTTCAGGTCCAGCGTAACTAAGAGCATGCATGATTTTGCCACATGTGTGGCAGCGGTGT
ATGT-TTATTGGTTGCTCCGCTGCCATAACCGAGCCATGTCACA--TTTGTACTCC------------------------
------TAGTAGCAGTTTGGCAGTTTTGCAAGCTTTGCTAAGCTGCGG--------------------------------
--------------------------------------------------------------------------------
----------------------CG-ACATTTTCTCGTGACGTGCCACGGTTCAACAGGAAAGGTGTGACGAAGTTGAGCA
AGGAACGAACGTGCCTCAGGTGCCAACTACCCAG-----GTACTGTACGGCTAAATCTGAAGTTGGTAACTGACCGCACC
CGTG-TCATCCTGTGGCGCTCACGATCTGAGTGGCATATGATCGGTACAACTGCTCCACCCGGGGTAGGC---GACATCA
CCTGATCGATCACACTTCAGCATGTTGTTCTC-ACGCTCCGCATCGTCGG------------------------------
--------------------------------------------------------------------------------
------------------------------------------CCAGGTGTTGCATGCACCGGCGAGACATGAT----T-G
TCCATGCCATATGAAAAACCAGTCGCGATCTAGATGAGCTTGTTTAAGGATTTCTTGGCGTCATTGGGCAATCCTCAGCT
ACCACACCCACCATTTTCCAAAAAACTGGAATGATACGTAC--TGTATTCTACAATTATGGCAAATTGTATGACATTTAC
GGTCGACACGATTATTAATAATCGCATCGCATTCAGTGT-----GATGGCAAAATCAGTAGTCAAAGCAGATCAATCTAG
ATGTAGAAACGTGAAGGGGGGCC------TGTGGTGCATACAAGAGCAAAAGGCAAGTGTCCACTCGTCAGAAAATTTCT
GCCCAAGAAAGAAAGA----AAAGGTAGGTGCGAATTTCCCTCGGGATTTTAGGCGCCGCCGCCGCCGCTAACGTAGCCG
CACGCCACACCGCCAGGCTCCAGCTGAG--------CTCTCTCTCTTGTAGAGCAGACCACCGCCTCACCTGCCAATTCT
ATGGTTGCGGTGATGGAGGTGCGTCCACA---CCTCCTCCTTGTCCTTCTTTGCCTCCTTGGCGCCGGCGCCGGCGCGGG
GATGGCGCAGTCTTTGCCGCCGGCGCCGGTGCCGCAGTCCGGGGT---GGCGGCGGCGCCGAGGCCCACGCCGTTCGGGC
GCACCATGTCGACGGTCATCACCGTCGCCATCAGCGTCTTCTTCTTCCTGCTCTTCTTCTGCGCCTACATCAACCAGTGC
CGCCTCGCCGAGA---ACGCCGCGCCGCAGGGGGCCAACGCCGCCGCGGCCGGGGCCGGGGCGTCCAGGAGGGGGAAGCG
CGGGCTGGACCCGGCGGTGGTGGCCACGTTCCCGATCATGCAGTACAGGGAGATCAAGGAGCACAAGATCGGCAGGGGCG
TGCTGGAGTGCGCCGTGTGCCTCACGGCGTTCGAGGAGGCCGACGACCTCCGGCTGCTGCCGCACTGCTCGCACGCCTTC
CACCCCGAGTGCATCGACCCCTGGCTCGAGGCGCGGATCACGTGCCCGCTGTGCCGCGCCAACCTCGAGAAGCCGCCGCC
GCC------------CGCCGTGGCGCCCCCGTCGCCCGAGCAGGTGGCGCGGCATCAGCCCTCGCCATCGCCGTCGCCGC
CGCACGCCGTGGCGATACCGGTGCGGGAAG------AGGAGGAGGAGGAGAGCGACGAGGACGACAGGAAGGAGGAGGCG
ATGGAGCTGGAGATGCTGCGCAGCGAGCGGCGGGCGGCGAGGCTGCCGAGATCGCACTCGACGGGGCACTCGCTCTTCGC
GGCGTCTGCCGCCGCCGCCGAGCGGAGCGACCACGAGAGGTTCACGCTGCGGCTGCCGCACCACGTGAGGGAGCAGGTGC
TGAGGTCGCGCCGCCTGCGCCACGCCACCAGCCTGATCGACTTCGCCGGAGCGAGCCCCGAGGGGAGCGTGCGCGGAGGC
CGGCCCGCGG------------GCGGCAGCAGACACGGCGGGCGGCGGTGGCAGGCGTTCCTGGCGAGGACGATGTCGTG
GGCCCGAGGGGGAGGCGACGGGTCGGTGCGGAAGGGGTGGGACGGGTCCACTCGGAGGGGAAGGGACGACGCCGAGTCGA
GCAGAAAGGGGGCCGCTTCGCCGGCGG------CGGCGCGGCCATGATGAAC-------TCCACACCGCCACCGGAACTG
CAGTGCAGAGCTTGACTGTA-AAAAATGCGTGTAATTTGATTTGCTTAATTTTTTAGTTGAGA-----TATGGATAAATT
TAATTTTTCGTGTTTTTAGCTAGGAATATG-AATGTTTGCGTGTGCTCTCGTGAGGCTGAAGTTTTTTCTCGTTTCTTTG
ACTCTGGCGAAGTGAAACGTTTTGTTCGATGTGTGGATTCCTCCATAGGATAAAAAGCTTTGGCGAGGGGCAAGAATCGG
AATGTTCACTTTTGGACTTTGTTCGCCGGCCTTTTAGTTGAAAAAGAATTCTATGAGACCAGGTCTCACGCGACACCCAT
ACTGATGGATAACACGTGGCATTCACAAAGCACACTTGACCCACCCCCCATTTAAAATCAGGGAGAGAGAGATTAGATGC
TTTGTGATTTATAAATGCCACGTGTCATTCATCAGAGCGGGCCTCACCTGCTAACCATGAGACCTGGTCTTATATAATTT
TTTTCCTCGTTTCGCTTACAGATGAGATGACAGCCTCCCCTTTTGTCAAGAGATCAATTTTTGTTTAGTATGACTAATAA
T---------ACAACTTTGGTTAAGAGACGGTGTTAGTGGGAGGAGCATTTGCATTTGCAAATCTCATTCTCGTGGCCGG
CGAGGT-------GCAAGCGTGAGCCGTAAGGCAGAGCAGATTGCGCCGCTGGTG-TGGTGATGGATGCCTCTTTAATCA
TTCCCGGTTTGTCCATCGTTCTTTGCGAGATTCCTGTTTTGGTTGGGCGTCGGTCGATCTTCCCTTTTTCTTCTTT----
--TTTCCACTCCACTGTCTCCCTCATGGTCAATTTATTAGTAGTACTCCTGTGAATTGGAAGGAGGATTCATTCATGTGT
AAAACAACTTGGGGGAGGCTCTTGTGCTTAAGAAATCAGCGGATAGGTTTGGCAGTACTG--AAAAAAATAT----ATGA
GCGGATAAGAACGTGGCGTGGTTACCACGGGCACCGCCGCGTCCTGACCT
>chr2B_1
GTACGAGAATAATGGACTCCGGAACAGTTTATGCTTTATTTTGGCAAATACAATCTGACAATATTGTCAGGTCAAGCGCC
GCAATATCGAAAGAAATATATTTTCAGGTCCAGCGTAACTAAGAGCACGCATGATTCTGCCACATGTGTGGCAGCGGTGT
ATGTTTTATTGGTTGCTTCGCTGCCATAGCCGAGCCATGTCACAATTTTGTACTCC------------------------
------TAGTAGCAGTTTGGCAGTTTTGCAAGCTTTGCTAAGCTGCGG--------------------------------
--------------------------------------------------------------------------------
----------------------CGAACATTTTCTTGTGACGTGCCACGGTTCAACAGGAAAGGTGTGACGAAGTTCAGCA
AGGAACGAACGTGCCTCAGGTGCCAACTACGCAG-----GT-----ACGGCTAAAGCTGAAGTTGGTAACTGATTGCACC
CGTGTTCATCCTGTGGAGCTCACGAATTGAGTGGCATATGATCTGTACAACTGCTCCACGA-GGGTAGGC---GACATCG
CCTGATCGGTCACACTTCAGCATCTTGTTCTC-ATGCTCCACACATTTGG------------------------------
--------------------------------------------------------------------------------
------------------------------------------CCAGGTGTAGCATGCACCGGTGAGACAATACATGATTG
TCCATGTCATATG-AAAACCAGTCACGATCTAGATGAGCTTGTTTAAGGATTTCTTGGCGTCATTGGGCAAGCCTCAGCT
ACCACACCCACAATTTTCCAAAAAACTGGATTGATACTGC------ATTCTACAATTATGGCAAATTGTATGACATTTAC
GGTCGACAAAAGTATTAATAATCGCATCGCATTCAGTGT-----GATGGCAAAATCAGTAGTCAAAGCAGATCAATCTAG
ATGTAGAAACGTGAAGGGGGGCC------TGTGATAC-TACAAGAGCAAAAGGCAAGTGTCCACTCGTCAGAAAATTTCT
GCCCAAGAAAGAAAGAAAGAAAAGGAAGGTGCGAATTTCCCTCGGGATTTTAGGCGCCGCCGCCGCCGCTAACGTAGCAG
CACACCACACCGCCAGGCTCCAGCTGAG----------CTCTCTCTTGTAGAGCAGACCACCGCCTCACCTGCCAATTCT
ATGGTTGCGGTGATGGAGGTGCGTCCACA---CCTCCTC---GTCCTTCTCTGCCTCCTTGGCGCCGGCGCCGGCGCCGG
GATGGCGCAGTCTTTGCCGCCGGCGCCGGTGCCGCAGTCCGGGGCGGCGGCGGCGGCGCCGAGGCCCACGCCGTTCGGGC
GCACCATGTCCACGGTCATCACCGTGGCCATCAGCGTCTTCTTCTTCCTGCTCTTCTTCTGCGCCTACATCAACCAGTGC
CGCCTCGCCGAGA---ACGCCGCGCCGCAGGGGGCCAACGCCGCCGCGGCCGGGGCCGGTGCGTCCAGGAGGGGGAAGCG
CGGGCTGGACCCGGCGCTGGTGGCCACGTTCCCGATCATGCAGTACAGGGAGATCAAGGAGCACAAGATCGGCAGGGGCG
TGCTGGAGTGCGCCGTGTGCCTCACGGCGTTCGAGGAGGCCGACGACCTCCGGCTGCTGCCGCACTGCTCGCACGCCTTC
CACCCGGAGTGCATCGACCCCTGGCTCGAGGCGCGGATCACGTGCCCGCTGTGCCGCGCCAACCTCGAGAAGCCGCCGCC
GCCGCCGCAGCCGTCCGCCGTGGCGCCCCCGTCGCCCGAGCAGGCGGCGCTGCATCAGCCCTCGCCTTCGCCGTCCCCGC
CGCACGCCGTGGCGATACCGGTGCGGGAGG------ATGAGGAGGAC---AGCGACGAGGACGACAGGAAGGAGGAGGCG
ATGGAGCTGGAGATGCTGCGCAGCGAGCGGCGGGCGGCGAGGCTGCCGAGATCGCACTCGACGGGGCACTCGCTGTTCGC
GGCGTCGGCGGCCGCCGCCGAGCGGAGCGACCACGAGAGGTTCACGCTGCGGCTGCCGCACCACGTGAGGGAGCAGGTGC
TCAGGTCGCGCCGCCTGCGCCACGCCACCAGCCTGATCGACCTCGCCGGAGCGAGCCCCGAGGGGAGCGTGCGCGGAGGC
CGGCCCGCGGGCGGAGGAGGCGGCGGCAGCAGCCACGGCGGGCGGCGGTGGCAGGCGTTCCTGGCGAGGACGATGTCGTG
GGCCCGAGGGGGAGGCGACGGGTCGGTGCGCAAGGGGTGGGACGGGTCCACCCGGAGGGGAAGGGACGACGCCGAGTCGA
GCAGAAAGGGGGCCGCTTCGCCGGCGG------CGGCGCGGCCATGACGACGTCGGCAGTCCACACCGCCACCGGAACTG
CAGTGCAGAGCTTGACTGTAG-AAAATGCTTGTAATTTGCCTT------TTTTTTAGTTGATTGATGGTATGGATAAATT
TAATTTTTCGTGTTTTTAGCTACAG-TAGG-ATTGTTTGCGTGTGCTCTTGTGAGGCCTGAACTTTTCTCGTTTCATTTG
ACTCTCGCGAAGTGAACTTTTTG--TCGATCCGCGGATTCCTCCATCCGATAAAAAGCTTTGGCGAGGGAGAAGAATCGG
AATGTTCACTTTTGGACTTGTGCACCCGCCT-------------------------------------------------
--------------------------------------------------------------------------------
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---------TTTCGCTTACAGATGAGATGACAGCCTTCCCTTTTGTCAAGAGATCAATTTTTGTTTAGTACAG----TAA
T---------ACAACTTTGGTTAAGAGACGATGTTAGTGGGAGGAGCATT------TGCAAATCTCATTCTCGTGGCTGG
CGAGGT-------GCGAGCGTGAGGCGTAAGGCAGAGCAAATTGCAATTGCGCCGCTGGTGATGGATACCTCTTTAATCA
TTCCCGGCTTGTCCATCGTTCTTTGCGAGATTCCTGTTTTGATTGGGCGTCGGTCGATCTTCCCTTTTTCTTTTCT----
--TTTCCACTCCACTGTCTCCCTCATGGTCAATTTAGTAGTACTCCTA-TATGAATTGGAAGGAGGGTTCATTCATGTGT
AGAACAACCTGGGGGAGGCTCTTGTGCTTAAGAAATCAGCGGATAAGTTTCGC----CATACAAAAATATATACACATGA
GCGGATAAGAACGTGGCGTGGTTACCACGGGCACCGCTGCGTCCTGACCT
>chr2A_1
GTACGAGAATAATGGACTCTAGAACAGTTTATGCTTTATTTTGGCAAATGCAATCTGACTATATTATCAGGTCCAGCGAC
GCATTATGGAAAGAAATATATTTTCAGGTCCAGTGTAACTAAGAGCATGCAGGATTCTGCCACATGTAT-GCAGCGGTGT
ATGC------------------------------------CACGATTTTGTAGCAGCAGCTAGGCAGTTCTGCAAGCTTT
GCTTTGTAGCAGCAGCTAGGCAGTTCTGCAAGCTTTGCTAAGCTGCGTCGTGGCCGTAGCACTCCCCGTACTGCAGTATG
GTTACATTCGGGATTAGATTTTGTTATAAACTTGGCATTGGCTAAGAAGCCTCCGTGAGTAATGAGAATCTCCTTTTCAC
CCGCAAAAAAAAAGAGCTGCGTCGAACATTTTCTCGTGACGTGCCACGGTTCAACCGAAAAGGTGTGACGAAGTTCAGCA
AGGAATAAACATGCCCCAGATACCAACTACCCAGGTACTGT-----ACGGCTAAAGCTGAAGTTGGTAACTGACCGCACC
CGTG-TCATCCTGTGGCGCTCACGATCTGAGTGGCATATGATCGGTACAACTGCTCCACCGGGCAGGCGACATGACATCA
CCTGCTCGATCACACTTGAGCATGTTGTTCTCCATGCTCCACACCGTTGGTCCAGGAGGGAAATATCTGGTGCACCGGAG
CTTGTGGTGCTACCGGTGTACCGGACTCATATTGTGCTTTTAAAATATTCAAAAAATATTCTATGACATCCTGTGCACCG
GTAGCATCACAAGTGCGGGTGCACCAGATACATTCCTTTAGTCCAGGTGTAGCATGCACCGGCAAGACATGAT----TTG
CCCATGTCATATG-AAAACCAGTCGCGATCTAGACGAGCTTGTCTAAGGATTTCTCGGCGTCATTGGGCAATCCTCAGCT
ACCACACCCACCATTTTCTAAAAAACTGGAATGATGCTGTATGTGTATTCTACAATTATGGCAAATTGTATGACATTTAC
GGTCGGCACGATTATTAATAATCGCATCGCATTCAGTGTAGTGTGATGGCAAAATCAGTAGTCAAAGCAGATCAATCTAG
ATGTAGAAACGTGAAGGGAGGGCCTGTGGTGTGGTGCATACAAGAGCAAAAGGCAAGCGTCCACTCGTCAGAAAATTTCT
GCCCAAGAAAGAAAGG----AAAGGAAGGTGCGAATTTCCCTCGGGATTTTAGGCGCCGCCGCCGCCGCTAACGTAGCGG
CACACCACACCGCCAGCCTCCAGCTGAGCTCTCTCTCTCTCTCTCTTGTAGAGCAGACCACCGCCTCAGCTGACAATTCT
ATGGTTGCGGCGATGGAGGTGCGTCCACACCTCCTCCTC---GTCCTTCTCTGCCTCCTCGGCGCCGGCGCCGGATCATG
CGTGGCGCAGACTTTGCCGCCGGCGCCGGTGCCGCAGTCCGG---GGCGGCGGCGGCGCCGAGGCCCACGCCGTTCGGGC
GCACCATGTCCACGGTCATCACCGTCGCCATCAGCGTCTTCTTCTTCCTGCTCTTCTTCTGCGCCTACATCAACCAGTGC
CGCCTCGCCGAGA---ACGCCGCGCCGCAGGGGGCGGCGGCCGCCGCGGCCGGGGCCGGGGCGTCCAGGCGGGGGAAGCG
CGGGCTGGACCCGGCGGTGGTGGCCACGTTCCCGATCATGCAGTACAGGGAGATCAAGGAGCACAAGATCGGCAGGGGTG
TGCTGGAGTGCGCCGTGTGCCTCACGGCGTTCGAGGAGGCCGACGACCTCCGGCTGCTGCCGCACTGCTCGCACGCCTTC
CACCCCGAGTGCATCGACCCCTGGCTCGAGGCGCGGATCACGTGCCCGCTCTGCCGCGCCAACCTCGAGAAGCCGCCGCC
GCCGCCGCAGCCGTCCGCCGTGGCGCCCCCGTCGCCCGAGCAGGTGGCGCGGCGTCAGCCCTCGCCTTCGCCGTCCCCGC
CGCACGCCGTGGCGATACCGGTTCGGGAGG------AGGAGGAGGAG---AGCGACGAGGATGACCGGAAGGAGGAGGCG
ATGGAGCTGGAGATGCTGCGCAGCGAGCGGCGGGCGGCGAGGCTGCCGAGGTCGCACTCGACGGGCCATTCGCTCTTCGC
GGCGTCGGCCGCCGCCGCGGAGCGGAGCGACCACGAGAGGTTCACGCTGCGGCTGCCGCACCACGTGAGGGAGCAGGTGC
TGAGGTCGCGCCGCCTGCGCCACGCCACCAGCCTGATCGACTTCGCCGGAGCGAGTCCCGAGGGGAGCGTGCGCGGAGGC
CGGCCCGCGGGCGG------CGGCGGCAGCAGCCACGGCGGGCGGCGGTGGCAGGCGTTCCTGGCGAGGACGATGTCGTG
GGCCCGAGGGGGAGGCGACGGGTCGGTGCGGAAGGGGTGGGACGGGTCCACCCGGCGGGGAAGGGACGACGCCGAGTCGA
GCAGAAAGGGGGCCGCTTCGCCGGCGCCGGCGCCGGCGCGGCCATGATGAAC-------TCCACACCGCCACCGGAACTG
CAGTGCAGAGCTTGACTGTAGAAAAATGCGTGTAGTTTGGATT------TGTTTAG-----TTGATGGTATGGATAAATT
TAATTTTTCACCTTTTTAGTAGCCATAGGAAAATATTTGCGTGTGCTCCTGTGAGGCCTGATG-TTTCTCGTTTCCTTTG
ACTCTGGCGAAGTGAAACTTTTGGTTCGGTCTGTGGATTCCTCCATCCGATAAAAAGCTTTGGCGAGGGAGAAGAATCGG
AATGTTCACTTTTGGACTTGTGCGCCCGCCT-------------------------------------------------
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---------TTTCGCTTACGGATGAGATGACAGCCTCCCCTTTCGTCAAGAGATCAATTTTTGTTTAGTAGAG----TAA
TAATAATAATACAACTTTGGTTAAGAGACGGTGTTAGTGGGAGGAGCATTTGCATTTGCAAATCCCATTCTCGTGGCCGG
CGAGGGGCGAGGGGCGAGCGTGAGGCGTAAGGCAGAGCAGATTGCGCCGCTGGTG-TGGTGATGGATGCCTCTTTAATCA
TTCCCGGTTTGTCCATCGTTCTTTGCGAGATTCCCGTTTTGGCTGGGCGTCGGTCGATCTTCCCCTTTTCTTTTCTTCTC
CATTTCCACTCCACTGTCTCCCTCACGGTCAATTTAGTACG------CCTATGAATTGGAAGTGAGATTCATTCATGTGT
GGAACAACTTGGGGGAGGCTCTTGTGCTTAAGAAATCAGCGGATAAGTTTCGCGATACATACAAAAAAATAT----GTGA
GCGGATAAGAACGTGGCGTGGTTGCCACGGGCACCGCCGAGTCCTGGCCT
>chr3A_1166
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-----------ACGGTGGTCGCCGTGGCCATCGGCGTTCTCTTCCTCCTGCTCTTCTTTTGCGCGTACGTCACCCAGTGC
CGCCTCGTCGAGGACCACGGCGCGCCGCAGGAGGGTAGCGTCGCGCC------GGGCGGGGTGTCCAGGCGGGGAAAGCG
CGGGCTGGACCCGGCGGTGGTGGCGACGTTCCCGATCGTGCCGTACAGGGAGATCAAGGAGCACAAGATCGGCAGTGGCG
CGCTGGAGTGCGCCGTGTGCCTGACGGAGTTCGAGGACGCCGACGACCTCCGGCTGCTGCCGCACTGCTCGCACGCGTTC
CACCCGGATTGCATCGACCCGTGGCTCCAGACGCGGACCACGTGCCCGCTGTGCCGCGCCAACCTCGAGAAGCCACCGCC
ACC------------GGCTGCCGCC---------------------------------CCAGCGCCCTCCTCGCCGCCGC
ATGCCGTCGTGGCGATGCCGGTGCAGCAGGGTGAGCAGAAGGAGGAC---AGTGACAAGGACGACCGGAAGGAGGAGGCC
GCAGAGCTGGAGAAGCTGCGCAGGGAGCGCCGGGCGGCGAGGCTGCTGAGGTCGCACTCGACGGGGCACTCGGCGGAGCA
GTGCGACTGCGAG---------------GACCACGAGAGGTTCACGCTGCGGCTGCCGCAGCACGTGAGGGAGGAGGTGC
T-------------------------------------------------------------------------------
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>chr3D_1166
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-----------ACGGTGGTCGCCGTGGCCGTCGGCGTTCTCTTCCTCCTGCTCTTCTTGTGCGCGTACATCACCCAGTGC
CGGCTCGTCGAGGACCACGACGAGCCGCAAGGGGGGAGCGTCGCGCC------GGGCGGTGTGTCCAGGCGGGGGAAGCG
CGGGCTGGACCCGGCGGTGGTGGCGACGTTCCCGATCGTGCCGTACAGGGAGATCAAGGAGCACAAGATCGGCAGCGGCG
CGCTGGAGTGCGCCGTGTGCCTGACGGAGTTCGAGGACGCCGACGACCTCCGGCTGCTGCCGCACTGCTCGCACGCGTTC
CACCCGGACTGCATCGACCCGTGGCTGGAGACGCGGACCACGTGCCCTCTGTGCCGCGCCAACCTCGAGAAGCCACCGCC
ACC------------GGCTGCCGCC---------------------------------CCAGCGCACTCCTCGCCGCCGC
ATGCCGTCGTGGCGATGCCGGTGCAGCAGGATGAGCCGAAGGAGGAC---AGTGACAAGGACGACCGTAAGGAGGAGGCC
GCAGAGCTGGAGAAGCTGCGCAGGGAGCGCCGGGCGGCGAGGCTGCTGAGGTCGCACTCGACGGGGCACTCGGCGGGGCA
GTGCGACTGCGAG---------------GACCACGAGAGGTTCACGCTGCGGCTGCCGGAGCAGGTGAGGGAGGAGGTGC
T-------------------------------------------------------------------------------
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>SNPs
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---------------S----------------------------------------S-----------------------
-----------------S----------S---------------------------------------------------
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---------------------------------------------------------------------------S----
-----------------------------------------SSSSS---------S------------------------
------------------------------------------------------------S-------------------
----------------------------------S-----S--S---S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
------S------S------------------------------------------------------------------
-------------------------------------SSSS---------------------------------------
--------------------------------------------------------------------------------
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-------------------------S----------------------------------------------------S-
---S----------------------------------------------------------------------------
---------------------------------------SSS--------S--------------------------S--
--------------------------------------------S-----------------------------------
----------S---------------------------------------------------------------------
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------------------------------------------------------------------S-------------
----------------------------S------------------SSS------------------------------
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------S-------------------------------------------------------------------------
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--------------------------------S-----------------------------------------------
---------------------------------------------------S----------------------------
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---------------------------------------SS--SSSSSS------------SS-----------------
----------------------SS-S--S--------------------S-------SSS-SS----SSSSS--S-----
------------------S---S-------S---------------SS---------------------SS---------
-------------------SSSSSS---S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS-------------------------------------------------------------SSSSSSS---
--------------------------------------------------------------------------------
---------------S--------S-------------------------------------------------------
------------------------------------------------------------------------S-S-----
------------------------------------S-----S-S-----S-----------------------------
-S-------------------------------------------S----S--SS---SS--------------------
--------------------------------------------------
>forward_523
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-----------------------GGTGCCAACTACCCAGGTAC-------------------------------------
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>reverse_2710
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---------------------------------------------------------------------TCGTTTCTTTG
ACTCTGGCGA----------------------------------------------------------------------
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