>input_sequence_60028
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----------------------------------------------------------------CCCACGCGCGCGTCTC
CACCGGTCACGGCGAACGGCGAGCTCCCCTCCGACCACCGCCGCGTGTCTGGGTAAGCATGGCGCGGGCGCTCTCCTCCC
GGGCGGCGGCGACCCTGTCCCGGCGGCTGGGGGCCCGGCCCGCGGC---GGCCGTGGCCCGCCGCGCCAACCACACGCGG
CGCCCGGGCGCGGGGGGCGCGATGGTGCTGGAGCTGGACGCGGCGGGGGCGTCGCCGGCGGCCGCGGAGGGC---GCGGG
CGCGCTCAAGCGGCGCCTCGAGGAGGCCATCGACGGCGCCATGGCCCGCATGTCCGAGCCCGAGTGGGCGCCCTTCCGGC
CCGGCACCTCCTACTACGCGCCGCCGCGGCCCGCGGGGGCCGCCCTCGGCCTGCTCGAGCTCGTCACCCGCGGCGGCGGG
ATCGGGGTGCTCCCGCCCCCGCTCTCCGACGACGAGGCCCGCGCCGTCGCCTCCTCCTCCCGCGGATACCCCTGCTCCGC
CTACTTCGTCGACGGTGAGCGGCCGTCCCGCCCCAGATCCCCCATTTCATTCCCCCTCTCCAAGTAACAATTAAAAATAA
ATAAATCAATAAATAATTCCCGAAACGCCCCAGAATAGGCACCTATTTGCAGCGCAAGGACAGCCGGTGGAATCCACTAC
GATTTAGAAACTAGTCTTGCTCTGCGATACAAGCTCATGTGG---CCCTGTTTAGCAATTTACCGTAAAA-TTCGATTCT
TCCGGGCTTAGTGATCGAAGTGA--------------TTAGTGCGATAAAATTAACAAAGCATAAGTCAAGTGCATTTCA
TCTCTAGTTCTCATCTTGTCATCAAA------------------------------------------------------
-ACAAAACATTTATCAATTGATCACACACTGTGTTCTTGCACCTGCATCCTTACTAAAACCTGGATTAATCCTTATGCAG
GACGCTTCCCGGATGAGGAGGTGGAGGGATTGGTAGAGGATGCAGATCTAGCTGAAGAGGACTGAACTGGAACCGCTAGT
TTCATCG----CACTGGGTGAAGTGGGGGATCAAGAAAG-ACCTGTCTGTTTTATGTTTTTATTATTACCTATCTATGGG
TTTCTGCTACTGTACATATGTAGAACACATGAATTCATGCCCTTTCATGAGGAAATAAGAACTTAACTGAATT-------
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>chr7A_1_TraesCS7A01G490400
CCGAATCCGTTGTGCACAGCGCGGCCGCCTCCTGCGGTGGCGGCGGGGCCCGCCGCCTCCTGGTGTGGCGGCAGGTGCCA
CGTGTCGCCTGCCGCACCTGTCGCCACTAGTCAGGGGGTCCTTTTTGACGTTTTTATCTGCAGATAGTCCTTTTTGACAA
TAGCGTTCGGCAGGGGGTCCTTTTGGACAAAAAATCGAATCCCAGCTGCCGGCATTCTCCCTCTTCGTGTAAACCTTATA
AAATAAGAGAGAATAGGCATAAGTATTGTGACATAATGTGTAATAACATCCCATAATGCAATAAATATCGATATAAAAAC
ATGATGCAAAATGGACGTATCAGTCTTCGACGGATCTCACGTGTTTTGGTTGATGTTTGTCTTTGGTTGATCTGCGTAGA
TCCGGTCTTTGTTCGTCTGTGTTCATATGTTTATAAGTTAGATCATTTCAATCTACGACTCTCTTATAAACTGCGGTTGT
TGTTGTGATGTGCTGGTCCTTTGATGCCTTAACACGACGACTTCCGGACTGACTACTACAAAAATGTTTGCTCGGCCCCA
GTGTGAGAGGGGCGATGATGACGCGCGCCTTCGACTCGTTCCGGTGTTGTAGTCGTCGCTAGCTGATTTATAGATATAGA
TGTAATTTTTGTCACTTCTCTTATTCTTTGTCCCATCATGATGTTTGATGGTGGATGATAGATAAGAAGCTTTT-TTTAG
AGTAGATAGGAGGTTTTTGCAAAAGAAAATTCATCACTACATTTACAAAAAGAGATTCCCAGGGGTAAACTTGTCAAAAC
CGTGAAACAGTCGGCGACGCCCACTTGCCCGTGGTTTGGTCTTTTCCGGTGGGCAAAACCGTCTTAAAAAA---TAAACC
AGTTCCCAGCCCGAGACGGAACGGAGCCGTGCCGACCTATTTGCGGATAGGCCCCCGGGCCGACAGCTATATTTACCACC
CACCTACCCCTCCCCCCACCTTC----------GCGAGACCACCCCGCACCCCA----------CCCACGCGCGCGTCTC
CACCGGTCACGGCGAACGGCGAGCTCCCCTCCGACCACCGCCGCGTGTCTGGGTAAGCATGGCGCGGGCGCTCTCCTCCC
GGGCGGCGGCGACCCTGTCCCGGCGGCTGGGGGCCCGGCCCGCGGC---GGCCGTGGCCCGCCGCGCCAACCACACGCGG
CGCCCGGGCGCGGGGGGCGCGATGGTGCTGGAGCTGGACGCGGCGGGGGCGTCGCCGGCGGCCGCGGAGGGC---GCGGG
CGCGCTCAAGCGGCGCCTCGAGGAGGCCATCGACGGCGCCATGGCCCGCATGTCCGAGCCCGAGTGGGCGCCCTTCCGGC
CCGGCACCTCCTACTACGCGCCGCCGCGGCCCGCGGGGGCCGCCCTCGGCCTGCTCGAGCTCGTCACCCGCGGCGGCGGG
ATCGGGGTGCTCCCGCCCCCGCTCTCCGACGACGAGGCCCGCGCCGTCGCCTCCTCCTCCCGCGGATACCCCTGCTCCGC
CTACTTCGTCGACGGTGAGCGGCCGTCCCGCCCCAGATCCCCCATTTCATTCCCCCTCTCCAAGTAACAATTAAAAATAA
ATAAATCAATAAATAATTCCCGAAACGCCCCAGAATAGGCACCTATTTGCAGCGCAAGGACAGCCGGTGGAATCCACTAC
GATTTAGAAACTAGTCTTGCTCTGCGATACAAGCTCATGTGG---CCCTGTTTAGCAATTTACCGTAAAA-TTCGATTCT
TCCGGGCTTAGTGATCGAAGTGA--------------TTAGTGCGATAAAATTAACAAAGCATAAGTCAAGTGCATTTCA
TCTCTAGTTCTCATCTTGTCATCAAA------------------------------------------------------
-ACAAAACATTTATCAATTGATCACACACTGTGTTCTTGCACCTGCATCCTTACTAAAACCTGGATTAATCCTTATGCAG
GACGCTTCCCGGATGAGGAGGTGGAGGGATTGGTAGAGGATGCAGATCTAGCTGAAGAGGACTGAACTGGAACCGCTAGT
TTCATCG----CACTGGGTGAAGTGGGGGATCAAGAAAG-ACCTGTCTGTTTTATGTTTTTATTATTACCTATCTATGGG
TTTCTGCTACTGTACATATGTAGAACACATGAATTCATGCCCTTTCATGAGGAAATAAGAACTTAACTGAATTCGTGTAA
CCTTTTCTTGTCATGTGCAACACTCATCAATATTGAGATCAGTAGTACTGTGG------TCACCATCTCTTGTGCTACTG
CCTGACTTTTTGGGTGAATTGAACAGTTTCAGTTACTGGTGATTTTTCTAGGTTGTGTGATGATGATGTTAAACATGCTC
ATGTGTTTGCGGAGATGTGTTCGATAGTGGAAATTGTGTCATGGCATTCAAATGATTGTATCATCTCCCAAACATGTTAC
ACAATTTCCATAAGGTTTACAGTATCTACAAAGTTCAAACTATACAAGTTGCTCCTCAGAATTAGAAGAG----TGGTAT
ACAACTGACCGAAATTAGAGTAAGATAC----------------------------------------------AGCAAA
GATTGCGCAATTCAGGCTAAATCTGATTGTTTTGCTTTGGCGGATTTGCCGTCGTGACGAGAGCACTGAACGGATCTCCG
AACGGGTTGGATAATCCGGCATTCACGGCGTACTGAGCCT---GCTGCTGCTGGTATGTCTGTGGCGGCATCGCCACCAT
CTGATGTTGTTGCTGCTGCTGCACCTGGAAGTAGCCATGCTGCTGTGCCTGGTAGTACTGCTGC---TGC------CCCA
TCATGGCGAACTGCACATTCGATGGCGGCGCGAAGCTGTTGGACATGGCAAACGGGTCATTGGGGTCAAATGGGTTCACC
GTGACGCCGCCGTTGTAGGTCACACTGGCGATTTGCTGCCTCCTCACATCGTCTTCGTATAGGCTGTCTAGCAGCAGCTT
GTCGAACCCTCCGGCTTGCTGAGCAAATGCAGATGAATCAGTAAAATTGCATGCAGTTATATGCTGTGTTCGGCATTGTG
GTACCTTTTCAAAAGCACTTCTTTTGTTTCTGATTTTGGGGATTGAA----------TACTAATTTGAGAAATTTCTGTT
TTTTGGGGATTGAAAGTTTTTTTTTTACTAATTTGAATGTAACAGAAGAATATCACGAGAATTGATAAAATTGCCCGTAA
TTAACTAGATTCTGCAGCTCAGCATATCACA
>chr7B_675
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----------------------------------ATCATGATGTTTGATGTTTGATGAACAGATAGAAAATTCTGTTGAG
AGTAGATAGGAAGTTTTTGTAGAAGAAAATTCA---CCACATTCACATAAAGAGATCCCCAGGGGTAAACGCGTCAAAAC
CGTGAAACAGTCGGCGACGCCCACTTGCCCGTGGTTTGGTCTTTTCCGGTGGGCAAAACCGTCTTAAAAAAAAATAAACC
AGTTCCCAGCCCGAGACGCAACGGAACCGCGCCGACCTATTTGCGGATAGGCCCCCGGGCCGACAGCTATATTTACCACC
CACCTCCCCCTCCCCCCACCTTCCCACACCTTCGCGAGACCACCACGCACCCCA----------CACACGCGCGTCT-TC
CACCGGTTACGGCGAACGGCGAGCTCCCCTCCGACCACCGCGGCGTGACTGACTTCGCATGGCGCGGGCGCTCTCCTCCC
GGGCGGCGGCGACCCTGTCCCGGCGGCTGGGGGCCCGGCCCGCGGC---GCTCATGGGCCGCCGCGCCAACCACACGCGG
CGCCCCC---------GCGCGATGGTGCTGGAGCTGGACGCGGCGGGGGCGTCGCCGGCGGCCGCGGAGGGCTCCGCGGG
CGCGCTCAAGCGGCGCCTCGAGGAGGCCATCGACGGCGCCATGGCCCGCATGTCGGAGCCCGAGTGGGCGCCCTTCCGGC
CCGGCACCTCCTACTACGCGCCGCCCCGCCCCGCGGGCGCCGCCCTCGGCCTGCTCGAGCTCGTCACCCGCGGCGGCGGG
ATCGGGGTGCTCCCGCCCCCGCTCTCCGACGACGAGGCCCGCGCCGTCGCCTCCTCCTCCCGCGGCTACCCCTGCTCCGC
CTACTTCGTCGACGGTGAGCGGCCGTCCCGTCCCAGATCCCCCATTTCCTTCCCCCTCCCCAAGTAACAAT-AATAAAAA
ATAAATAAATAAACAATTCCCGAAACGCCCCAGAATAGGCGCGTATTTGCAGCACAAGGACAGCCCCAGAA---------
-----------TAGTCTTGCTCTGCAATCCAAGCTCATGTGGCTCCCCTGTTTAGCAATTTACCGTAAAAATTCAATTCT
TCCGGGCTTATTGATCGAAGCGA--------------TTA--------------ACAAAGTATAAATCACGCGCATTTCA
TCTCTAGTTTTCATCCTGGCATCAAACCCAGATGCTTTGACTCCGAGTTCTTGGAGTGACGGTTTTCTCTGTAAATTGTA
AAC-AAACATTTATCAATGGATCACAGGCTGTGGTCTTGCACTTGCATCCTTGCTTAAACCTGGATTAATCGTTATGCAG
GGCGCTTTCCGGATGAGGAGGCGGAGGGATTCGTAGAGGATGCAGATCTAGCTGAAGAGGACTGAACTGGAAGTAGTTCC
ATTGCACTGGCCACTGGGTGAAGTGGGGGATCAAGAAAAAACCTGTCTGTTTTATGTTTTTATTA---CCTATCTATGGG
TTTCTGCTAATGTACATATGTAGACCACATGAATTCATGCCCTTTCATGAGGAAATAAGAACTTAACTGAATTCGTGTAA
CCTTTTCTTGTCATGTGCAACACTCATCAATATTGAGATCAGTAGTACTGCGTTT------ACCATCTCTTGTGCTACTG
CCTGACTTTTTGGGTGAATCGAACAGTTTCAGTTACTGGTAATTTTTCTAGGTTGTGTGA---TGATGATAAACAAGCTC
ATCTGTTTGCTGAGATGTGCTTGTTGTTCGAAATCGTGTCATGGCATTCAAACGATTGTATCATTTCCCAAACATGTTAC
ACAATTTCCATAAGGTTTACAGTACCAGCAAAGTTCAGACTATACAAGTTGCTCCTCAGAATTAGAAGAGGGGTGGGTAT
ACGACTGACCGAAATTAGAGTAAGATAC----------------------------------------------AGCAAA
GATCGCGCAATTCAGGCTAAATCTGATTGTTTTGCTTTGGCGGATTCGCCGTCGTGACGAGAGCGCTGAACGGATCTCCA
AACGGGTTGGATAATCCGGCATTCACGGCGTACTGAGCCT---GCTGCTGCTGGTATGTCTGTGGCGGCATCGCCACCAT
TTGGTGGTGTTGTTGCTGCTGCATCTGGAAGTAGCCATGCTGCTGTGCCTGGTAGTACTGCTGCTGCTGC------CCCA
TCATGGCGAACTGCACATTCGATGGCGGCGCGAAGCTGTTGGACATGGCGAACGGGTCGTTGGGGTCAAATGGGTTCACC
GTGACGCCGCCGGCGTAGGTCACACTGGCGATTTGCTGCCTCCTTGTGTCGTCTTCGTATAGGCTGTCCAGCAGCAGCTT
GTCGAACCCTCCGGGCTGCTGAGCAAATGCAGATGAATCAGTAAAATTGCATTCAGTTATATGATGCGTTCGGCATTGTG
GTACCTTTTCAAAAGCACTTCCTTTATTTCTGATTTTGGGGATTGAA---------------------------------
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>chr7D_719
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-------------------------------------------------------------------------------G
AGTAGATATGAAGTTTTTTTAAAAGAAAATTCA---CTACATTTACGAAAAGAGATTCCCAGGGGTAAACGCGTCAAAAC
CGTGAAACAGTCGGCGACGCCCACTTGCCCGTGGTTTGGTCTTTTCCGGTGGGCAAAACCGTCTT-AAAAAAAATAAACC
AGTTCCCAGCCCGAGACGGAACCGCGCCG-----ACCTATTCGCGGATAGGCCCCCAGGCCGAGAGCTATATTTACCTCC
GGCTCCGCA-----CCCACCTTCCCAGACCTTCGCGAGACCACCACGCACCCCACCCCACCCCACCCACGCGCCTCT-TC
CACCGGTCACGCCTC-------GCTCCCCTCCGGCCACCACTGGCGCCTGACTGTCGCATGGCGCGGGCGCTCTCCTCCC
GGGCGGCGGCGACCCTGACCCGGCGGCTGGGGGCCCGGCCCGCGGCTGCGGCCCTGGGCCGGCGCGCCAACCACACGCGG
CGCCCGGGC------GGCGCGATGGTGCTGGAGCTGGACGCGGCGGGGGCGTCGCCGGCGGCCGCGGAGGGCTCCGCGGG
CGCGCTCAAGCGGCGCCTCGAGGAGGCCATCGACGGCGCCATGGCCCGCATGTCGGAGCCCGAGTGGGCGCCCTTCCGGC
CCGGCACCTCCTACTACGCGCCGCCCCGCCCCGCGGGGGCCGCCCTCGGCCTGCTCGAGCTCGTCACCCGCGGCGGCGGG
ATCGGGGTGCTCCCGCCCCCGCTCTCCGACGACGAGGCCCGCGCCGTCGCCTCCTCCTCCCGCGGCTACCCCTGCTCCGC
CTACTTCGTCGACGGTGAGCGGCCGTCCCGTCCCAGATCCCCCATTTCATTCCCCCTCTCCAAGTAACAAT-AAAAAA--
-TAAAAATAAAAACAATTCCCGAAACTCCCCGGAATAGGCACGTATTTGCAGCGCAAGGACAGCCCCACAA---------
-----------TAGTCTTGCTCTGCAATCCAAGCTCATGCGGCTCCCCTGTTTAGCAATTTACTGT-AAAATTCAGTTCT
TCCGGGCTTATTGATCGAAGCCATTGCTGCGACAAATTTA--------------ACAAAGTATAAATCACGCGCATTCCA
TCTCTAGTTCTCATCCTGGCATCAAACCCAGATGCTTTGACTCTGAGTTCTTGGAGTGACGGTTTTCATTGTAAATTGTA
AACAAAACATTTATCAGTTGATCACAGACTGTGTTCTTGCACTTGCATCCTTGCTTAAACCTGGATTAATCGTTATGCAG
GACGCTTTCCGGATGAAGAGGCGGAGGGATTCGTAGAGGATGCAGATCTAGCTCAAGAGGACTGAACTGGAACCACTAGT
TTCATTG----CACTGGGTGAAGTGGGGGATCAAGAAAG-ACCTGTCTGTTTTATGTTTTTATTATTACCTATCTATGGT
TTCTTGCTACTGTACATATGTAGAACACATGAATTCATGCCCTTTCATGAGGAAATAAGAACTTAACTGAATTCGTGTAA
CCTTTTCTTGTCATGTGCAACACTCGTCAATATCGAGATCAGTAGTACTGTGTCTTGGATCACCATCTCTTGTGCTACTG
CCTGACTTTTTGGGTGAATTGAACAGTTTCAGTTACTGGTGATTTTTCTAGGCTGTGTGATGATGATGATAAACATGCTC
ATGTGTTTGCTGAGATGTGCTCGATGGTCGAAACTGTGTCATGACATCTAAACGATTTTATCATTTCCCAAACATGTTAC
ACAGTTTCCATAAGGTTTACAGTGTCAACAAAGTTCAAACTATACAAGTTGCTCCTCAGAATTAGAAGAG----GGGTAT
ACGACTGACCGAAATTAGAGTAAGATACGGCAAAGATTGTGCAATTCAGGCTAAATCTGATTAGAGTAAGATACAGCAAA
GATTGCGCAATTCAGGCTAAATCTGATTGTTTTGCTTTGGCGGATTCGCCGTCGTGACGAGAGCACTGAATGGATCGCCG
AACGGGTTGGATAATCCGGCATTCACGGCGTACTGAGCCTGCTGCTGCTGCTGGTATGTCTGTGGCGGCATCACCAGCAT
TTGATCTTGTTGTTGCTGCTGCATCTGGAAGTAGCCATGCTGCTGTGCCTGGTAGTACTGCTGC---TGCTGCTGGCCCA
TCATGGCGAACTGCACGTTTGATGGCGGCGCGAAGCTGTTGGACATGGCGAACGGGTCATTGGGGTCAAATGGGTTCACC
GTGACGCCGCTGGTGTAGGTCACACTGGCGATTTGCTGCCTCCTCGCGTCGTCTTCGTATAGGCTGTCTAGCAGCAGCTT
GTCGAACCCTCCGGCTTGCTGAGCAAATGCAGATGAATAAGTAAAATTGCATTCAGTTATATGCTGCGTTCGGCATTGTG
GTACCTTTTCAAAAGCACTTCTTTCATTTCTGATTTTGTGGGTTGAAAGTTTTTTTTTACTAATTTGAATAATTTCTGTT
TTTTGAGGATTGAAAGA-TTTTTTTTACTAATTTGAATGTAACAGTAGAATATCACGAGAACCGATAAAATTGCCCGCAG
CTATCTAGATTCTGCAGCTCAGCACATCACA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------S-S-----SSSSSS----SS--S----S--
-----------S-------S-------------SSS----------------------------------SS--------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
-----S--------------------------------------S-----------------------------SS-S--
-----------------------------------------S-----S---SS-SS------------------------
-----------------------------------------------------S---S----------------------
---------SSSSSS-----------------------------------------------------------------
------------------------------------------------------S-------------------------
-------------------------S--S---------------------------------------------------
-----------------------------------------------------------------S--------------
------------------------------S----------------------------------------S-----S--
------S------S----------------------------S----------------------SSS-S-SSSSSSSSS
SSSSSSSSSSS--------------S--S---------------------------------------------S-----
----------S---------S-------------------SSSSSSSSSSSSSS------S----S---S-S--------
---------------S--S-------------------------------------------------------------
--------------------------S---------------S---------S--S---------------S--------
-------S-------------S---------S------------------------------------------S-----
-----S--------------------------------------------------------------------------
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----------------------------------------------------S---------------------------
--------------------------------------------------------------------S-----------
----------S--------S-----S--S-----------------------S-----------S---------------
--------------------------S-----------------------------------------------S-----
--S-----------------------------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
S-----------S----------S--------------------------------------------------------
-------------------------------------------------S------------------------------
------------S--------------------------------S-S--------------------------------
----------------------------------------------------S-------------S-------------
-------------------------S------------------------------------------SS----------
-----S----------SS---------------------------S---------------SS--------------S-S
S--S--------------------S------
>forward_559
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-----------------------------------------------------------AAAAATGTTTGCTCGGCCCC-
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>reverse_1947
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--------------------------CACTGTGTTCTTGCACCTGC----------------------------------
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-------------------------------
>forward_611
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-------------------------------CGACTCGTTCCGGTGTTGTA-----------------------------
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>reverse_2075
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--------------------------------------------------------------------------GCTAGT
TTCATCGCACTGGG------------------------------------------------------------------
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-------------------------------
>forward_621
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-----------------------------------------CGGTGTTGTAGTCGTCGCTA-------------------
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>reverse_2426
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-------------------------AGTGGAAATTGTGTCATGGCA----------------------------------
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-------------------------------
