>input_sequence_59981
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----------------------------------------ATGAAAGGCGGCTTTGTCGTCGACGGGCCGCTCTTGGTCC
TGGGTCGTGTGCTCCTCCTCCTCCTCCTCCTGCCGGTTGCTGTTTGGTTCGTGCTGGACGTATCCCCGGTCCTCACGTAC
TCCGGCAGCATAATAACGGCCAGACATCTTCCCCAGGCCCAAGGTACGTACGTGAAACGGAGTCGCCGGGTGTAAAATCA
TGCCGTCGTTGTCGTCGTCTTGGTCCGCCCATGCATCCATCGATCTCCCCCCGTCTTCTTCTATCCTTCTTCATCTTCAC
CAGTTGTCAAGCTCCATTGTTCCACGTCTTCTTATTTCACCACAAGCTTTGTGTGATGAGTTGTTTCTCCAGGCACGGAG
ATTTCACGGTTTCAACTCTGTGCACATCGATCGAATTCTCCCCCGGTGTATATAA-------TAGTGACAGAGTGTTGTT
TGGTAATTGATAGCCTGTAGCAACTATGCAAAGGGCAAGTGGGTAGCGGATGCGAGGAGGCCGCTCTACTCCGGCAACGA
GTGCAGGCGATGGCTG----------------------------------------------------------------
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--TCACGAATGTGGTCTTGCCGCAGGACGGAACGCACAGATTTCTCGTACGAGAGCTACCGGTGGCAGCCGCATGACTGC
GAGATGCCCGACTTCTCAGGGCCAAACTTTCTGCAACGGTACGTGCTCCAATCATCTGCGCCCTTCTCCAATAGATTTTG
CCGCGAAGACTCGTCGATCGTAAGTTGTAACATATCCATGGCGATGCCTATCGTAAGTTGTAACATATCCATGGCGATGC
CTGATGACAGGATGAGGAACAGAACTCTGGCATTCGTGGGCGATTCGCTGGGCAGAGAGCAGTTCCAGTCCATGATGTGC
ATCGCGACAGGCGGCAAGCGCAGCCCCGAGGTTGAAGACGTCGGCCGGAGATACGGCCTCGAAAAGGCCCCGTCGCCGTT
CAGTCCGGGCGGCTCCGCCTACCGCTTCCCAGAGACCAACACCACCATCCTCTTCTACTGGTCCGCCACCCTGTCCCAGC
TGGAGCCTCTGACGGACGAGAGGAGGAGCTACGCGCTGCACCTCGACCGGCCGGCGCCGTTCCTGAAGGAGCACCTCCCC
AGCTTCGACGCCCTGGTGCTCAACACCGGCCACCACTGA-----------------------------------------
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>chr6A_1_TraesCS6A01G303700
ATTGTAAATTGTTGGTTGGTTGGTTCAAACTGCTTTACCACGTATAAACCACAAGACGAAGGAATCATAAAATATCATTC
ACTGAAGCTAGTTTTTTTTTTTGCGATGGAATTGAAGCTATTTTTGTTGCAGATATATTATGCTACCTCGAAAAGGCATG
TGACTCCTCAGAGAATTTCAAACCCATACTCCCTCCATCCTAAAATGTAAGTCCTATTTGTTTGACTCTAAGTTAACTTT
CTTAAGATTGAGAAACTTTATATAAATAAGTATCAATAATGCGAAATGCTCCTCGCAATTTTTTTAGATACATGCCAAAA
TGCACCACGAAATGGAGCACTGTAAGGCCGAGGCATAGCTCGAGGCCGGATGAGCTGATGCCGCCTTCATGGCCGAGCTC
CTCAAGGACCCGCAACTCGTCACGAAGAACCGTGCGTTCTTCCATTCCGTGGAGGATAGAGCTACTCTTTTATATGTCTA
GTTCTATTTAGTTTATCTTGATGCTTTAGCTAATTCCATGTCGATGTAGTGGTAATGTAGTAGGTAATGGACTGTTTAAT
TATGCTATGTATGATGTTAATGTGGTATTACTGTTCAATTATGCAATGAATTGTTTAAATTTTGCGTGGCAAAATTTTAT
TCGAGGAATTAAGGTTTGGGGATGGGCTAGTTGAGCAAAAAAATTAATTCCCCCCAAAACAAGGAATTAAACTATGGGAT
GAGGTAGAGATGTCCTAATTGTGATGAGCTAGTAGAGATTCCTCGCCAGCACAGATGAGAGGACAGTCAACTCGATGATC
TACATGATCTCAATGGCGCATTACTTAATACTATGCCTATAAAATAGAGGAGAGAAACTCTTCTTCACGAGTACCACGTT
CTCCCCTCAACGTATGGAGATAAAGAAACGCAAGCGCGAAGCAATTGTCAGTTCGGCGAAGCTCCGGCCGGTCGTAAAGC
TCCTCCCGTAGCTGGGTAGCAGCAGCTTTGGGGGGAGGAAATGAAAGGCGGCTTTGTCGTCGACGGGCCGCTCTTGGTCC
TGGGTCGTGTGCTCCTCCTCCTCCTCCTCCTGCCGGTTGCTGTTTGGTTCGTGCTGGACGTATCCCCGGTCCTCACGTAC
TCCGGCAGCATAATAACGGCCAGACATCTTCCCCAGGCCCAAGGTACGTACGTGAAACGGAGTCGCCGGGTGTAAAATCA
TGCCGTCGTTGTCGTCGTCTTGGTCCGCCCATGCATCCATCGATCTCCCCCCGTCTTCTTCTATCCTTCTTCATCTTCAC
CAGTTGTCAAGCTCCATTGTTCCACGTCTTCTTATTTCACCACAAGCTTTGTGTGATGAGTTGTTTCTCCAGGCACGGAG
ATTTCACGGTTTCAACTCTGTGCACATCGATCGAATTCTCCCCCGGTGTATATAA-------TAGTGACAGAGTGTTGTT
TGGTAATTGATAGCCTGTAGCAACTATGCAAAGGGCAAGTGGGTAGCGGATGCGAGGAGGCCGCTCTACTCCGGCAACGA
GTGCAGGCGATGGCTG----------------------------------------------------------------
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--TCACGAATGTGGTCTTGCCGCAGGACGGAACGCACAGATTTCTCGTACGAGAGCTACCGGTGGCAGCCGCATGACTGC
GAGATGCCCGACTTCTCAGGGCCAAACTTTCTGCAACGGTACGTGCTCCAATCATCTGCGCCCTTCTCCAATAGATTTTG
CCGCGAAGACTCGTCGATCGTAAGTTGTAACATATCCATGGCGATGCCTATCGTAAGTTGTAACATATCCATGGCGATGC
CTGATGACAGGATGAGGAACAGAACTCTGGCATTCGTGGGCGATTCGCTGGGCAGAGAGCAGTTCCAGTCCATGATGTGC
ATCGCGACAGGCGGCAAGCGCAGCCCCGAGGTTGAAGACGTCGGCCGGAGATACGGCCTCGAAAAGGCCCCGTCGCCGTT
CAGTCCGGGCGGCTCCGCCTACCGCTTCCCAGAGACCAACACCACCATCCTCTTCTACTGGTCCGCCACCCTGTCCCAGC
TGGAGCCTCTGACGGACGAGAGGAGGAGCTACGCGCTGCACCTCGACCGGCCGGCGCCGTTCCTGAAGGAGCACCTCCCC
AGCTTCGACGCCCTGGTGCTCAACACCGGCCACCACTGAAACAAGGTGAAGTTCCGCAGGAACCGCTGGAGGCTGTACGA
CGGCGGGAAGCCGGTGGGGGAAGCGAACCTCAGCCGTGCGAGGGGCGCCAAGCTCCACAGCATCGCCAGGTGGGCGGACG
CGCAGCTCGCGCGGCACCCTCGGGTGAGCGTTTTCCTGAGGACCATCTCGCCGGTGCATTTCGTCGGCGGCGAGTGGGAC
ACCGGGGGGAGGTGCGACAGCACCGTCCCCTTGTCCGGCGGCAGCGGGGTCTCGCGGGATCGCTCGAGCGACCTGGCTGC
GGAGCGCGCGGTGAACGGGACTCGGGTTAGGCTCCTGGATGTCACCGCGATCTCGCAGCTGCGCGGCGAGGGCCACATCT
CTAACCATAGCACCAAAGTTCAGAGGGAGGTTTATGATTGTTTGCATTGGTGCCTTCCGGGC------ATACCGGATACG
TGGAATGAGCTCCTTTTTGCACTGATGCAGTAACTGTAGATATGATGTATACGCTTCAGTAAATGTGATCTTTTTGTGTA
GGGCACTCCAGTTTTTTT-TAAATGAAATCCAATCCCATATATACGATGGTCTGTTCTCAGTACACATGGCAGCGTGGGG
GCTAGCGATGAGGAGTCTTCGACCAAGGTGCACTGGAGATTAAGCAGTCATGGCACCGTTGCAGGCAGTGCGCACATGAA
AGCAATCGCAAGGGTGCACCGCTATAGGAAAGAGGCAATGCTACTGCATAGTGGTGATGCGAGACAAAGAATTAAAACAT
AGCCGGTTGCTTCACAATATGAATACAAGTATGGCACATACATAAATTTGTTCAAGAAATACAATGTGAAGCAACTATTC
AGATTTAGTAATCTACAACAAAATCAGATTTAGTACTCAAGGTTTAGGCAATGAACGGCCTTCGACAATTGAGTCGTTTC
TTTTCTTTTCTGTAGTTTGACTGAACTTGTATCATGAACCATCGTCACCTAAATCTTTTACAAGAAAATGTTGATCAGCT
GAAAGA
>chr6D_1337
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--------------------------------------------------------TGAGTTGTTTCTCCAAGCATGGAG
ATTTCACGGTTTCAACTCTGTGCACATCGATCAATTCTCCTCCCACACGGCCTATATAATTCTACTGACAAAGTGTTGTT
TGTTAATCGATAGCCTGTAACAACTATGCAAAGGGCAAGTGGGTGGCGGATGCGAGGAGGCCGCTCTACTCCGGCAACGA
GTGCAGGAGGTGGCTATCACGAATGTGGTCCTCTGCCTTACCGGGGTAAAGTAGAAGGCCCCCGCGTCGCCCCCGTCTCG
GGCGACTCGGGCGGCTCCGCAAACCCTAGCCGCCAGGGTCACCACCACCTCCCTCCCTTCCCTCCGCCACCGCCGGAGGA
CGCCGCAGAGCTAAGCCCGGGGGCCGACGGCGGTGGCGGAGGCTCTCCTCCCTGGATCGCGTCAGAGGGGGTGGGGCGGG
ACCTCCACGCGCGTGACGGCGCGGTGGCGATCTGATCCATGGTGGCGCGATGGCGTGCTCTGGGCGGAGGCCTTGGGCGG
CGGCGCGGTTGCCTGGTGGTGAGCCGGCGGCAGCGACGTGAAGAGGGTGCCGTGGAGGTCCGGGCTGGCCAGATCAGGAT
CCGGGGCGGCGGCCCTTGACGGCGGCGGCGAGTGAAGCTCGGGCTTCCCACGGCGGCATGGCGTGGTGCAGTCCATATCC
AAGGCGGATCTGCGTCGGCGATCTCGTGGTTTTGCCACGGATTGGTTCCGATCAGAGACGGTGATGAGCGTGCGGGATTC
CATCTCGGCGGCTCTTGCGGTTTGGCGAGGTGGGGTAGGAGTCCTCCTCCCAGGCTCCAGTGGTGGCGCATTCAGGCAGT
GGCCGGTGTGCCAGGGCTCCTATGGTGGCACTGCTGTTGCGGTTGGTCGCCGGATCTAGGCGGCTAGCTCTGGGGCTTTG
AAGGCGGTCGAGACAGTGCACAGGTTGTAGGGTGGATTTCTTGGGACGGATCCGAGTTAAAACTTGGTCTTCGGTCGTTG
GCCGGAGCCGGTGATGACGATGCCCTTATCATCGTTTCCTTCATGAAGGCATCATCGAGGTACAAATCCCAAACCCACCC
AATACCCCCGGGGGAAACACTAAATCAGTTGATCGGATGACGGTGGCAGTCATGTGTCGTTACCCCCTTGGGGGCGGCAT
TCTTGGAGATGCACTCGGGCTCGAGGGACCAGCGGATGGCTTCTTCGGTGGAGCGGTGTTTCTTTCTACATATTCATGGC
GGCGGCTCTTGGCGGCATGGAGCAGCGGAGGCTTGGCGTCAGATGTGTGATGATGGACACGTGCAGGAGGTCGACGCTGT
CTGGCGTCGTGGTGGCGTCGGCGGCAGCTAGACCGGGCAATGTTGATGCAGCAGTACAACTCTGAAGATGGATTGGTGGC
AAGTGGCTGCGGCGGCCTCATACCCAGCAGTCATCCTGGTTGAGGAGCACGCCGGACTGGTGGGTGCCCATACCCGACAG
GCGTCCTGGTTGGGACCTCAGGTCTTAGATTAGGTCTGGCTGCGATGTCTGTTTGATATTAGGCCCAGACTATCAGCGCC
CCTTCATCAATTGGATAGGTGTAGCGACAGTTGTTGCTTAGACGATGATTTTAGTCTTACTGTTGTATGACTTTGTAAGA
TTTTGTGAGAATAATTAATAAAGTGGCCGCATGTATCACCGAGATGCAGAGGCCGGAGGTCCTCCTCCTTTTTTAAAAAA
AATCACGAATGTGGTCTTGCCGCAGGACGGAACGGACAGATTTCTCGTACGAGAGCCACCGCTGGCAGCCGCATGACTGC
GACAGGCCCGATTTCTCAGCGACGCACTTTCTTCAAAGGTACGTGCC----------GCGCCCCTCTCCAATAGATTTTG
TCCCAAGGACTCGTCGCTCGTCCTCAAGTT----------------------GTAAGTTGTAACACATCCATGGCGATGC
CTGATCACAGGATGAGGAACAGAACTCTGGCGTTCGTGGGCGATTCGCTGGGCAGAGGGCAGT-CCAGTCCATGATGTGC
ATCGCGACAGGCGGCAAGCGCAGCCCCGAGGTTGAAGACGTCGGCCGGAGATACGGCCTCGAAAAGACCCCGTCGCCGTT
CAGTCCGGGTGGCTCCGCCTACCGATTCCCAGAGACCAACGCCACCATCCTCTTCTACTGGTCCGCCACCCTGTCCCAGC
TGGAGCCTCTGACGGACGAGAGGAGGAGCTACGCGCTGCACCTCGACCGGCCGGCGCCGTTCATGCAGGAGCACCTCCCC
AGCTTCGACGCCCTGGTGCTCAACACCGGCCATCATTGGAACAAGGTGAAGTTCAGGAGGAACCGCTGGAAGCTGTACGA
CGGCGGGGGAG-----------GCGAACCTCAGCCATGCGAGGGACGCCAAGCTCCACAGCATCGCCAGGTGGGCGGACT
CGCAGCTCGCGCGTCACCCTTGGGTGAGCGTTTTCCTGAGGACCATCTCGCCGGTGCATTTCGTCGACGGCGAGTGGAAC
ACCGGGGGGAGGTGCGACAGCACCGTCCCGCTGTCCGGCGGGAGCGGGGTCTCGCGGGATCGCTCGAATGACCTGCCTGC
GGAGCGCGCGGTGAACGGGACTCGGGTTAAGCTCCTGGATATCAGCGCCATCTCGCAGCTGCGCGGCGAGGGCCACATCT
CGAACCATAGCACCAAAGTTCAGAGGGAGGTTTACGATTGTTTGCATTGGTGCCTTCCGGTTCCGGGTATACCGGATACG
TGGAATGAGCTCCTTTTTGCACAGATGCAGTAACTGTAGATATGATGTATACGCTTCGGTAAATGTGATCTTTTTGTGTA
GGGCACTCCAGTTTTTTTTTAAATGAAATTCAATCCCATATATACGATGGTCTGTTCTCAGTACACATGGCAGCGTGGGG
GCTAGCGATGAGGAGTCTTGGACCAAAGTGGACTGGAGATTAAGCAACCATGGCACCATCGCAGGTCGTGCAC-------
----------------------------------------------------------------------------ACAT
AGCCGGTTGCTTCACAATATGAATACAAGTATGGCACATACATAAATTTGTTCACGAAATACCATGTGAAGTAACTATTC
AGATTTAGTAATCTACAACGAAATCAGATTTAGTACTCAAGGTTTAGGCAATGAACGACCTTCGACAATTGCATCGTTTC
TTTTTCTTTCTATAGTATGACT----------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S---S----
--------------------------------S-S-SSS-S---SSSSSSSS--S---------S-----S---------
--S----S-----------S------------------------S-----------------------------------
-------S-S-----S----------------------------------------------------------------
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----------------------------------S---------------------S----S------------------
--S-S------S-------S-S-SS-------S---S---------SSSSSSSSSSS------S----------------
S-S-S-S---------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S--------------
-----S-------------------------S-------------------------S-----S----------------
------------------------------------------------------------------S-------------
---------S--------------S---------------S---------------------------------------
--------------------------------------------------------------S--S--------------
--------------------------------S--S--S---------------S-S-------------S---------
-------SSSSSSSSSSSSSSS-------------S--------S----------------------------------S
-------------S------S---------------------------------------------S----------S--
-----------------------------SS----------S-------------------------SS------S----
-----------------------------S----------S---S---S-------------------------------
-S--------------------------------S-------------------------SS------------------
----------------------S----------------------------------S----------------------
-----------------------------S--------------------------------------------------
-------------------S------S---S---------------SS---------S-S-----SS----S-SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
------------------------------------------------------S-------S--------S--------
-------------------S-------------------------------------S-------------SS-------
----SS-----S----S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS
>forward_330
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----------------------------------------------------------------------CATGCCAAAA
TGCACCACGA----------------------------------------------------------------------
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>reverse_1530
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---------ATGGCTGTCACGAATGTGGT---------------------------------------------------
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>forward_1176
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------------------------------------GCCCAAGGTACGTACGTGAA------------------------
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>reverse_4332
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-----------GGGTGCACCGCTATAGGAAA-------------------------------------------------
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