>input_sequence_59977
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---------------------------GTATATAAAGCACCAGTCCGCC----ACGACACCAACACATCAACATCTCAAG
CTCCTTTTCTGCTCAACGCCATCTCTCCGCTGAGAAACCAAAACAACAGGAGATCACAAT--------------------
-----------------ATGAAGAAGCCATCGACGCTTCTCCGATCTCTCTCTACACGCCTCTCTGCGCGGCTCGCGCCG
TCGCCGGCGGTGGCCCCATGGCCGCCGGTGCGCTCCGCATACGACCGCTGGCTGGCCGCCGAGCTCGATGAGCTCCGCGC
CGATCCGATCGCCCCGTGCACCAGCGCCGCCTGGCTCGGCCGCGCCATCGGCCTCGCCGTCGCCGCTCAGAGACAGCTCG
TCGCGTCGGCGTCGGCGGCCCCGGCAGCCGGCATTGACCGCAAGACCATCGACGAGTGCGTGGAGGACACGGTGGAGCTG
CTTGATGCGTGCGCCGGACTCAGGGGCCGCCTCGACCTGATCAGGAGCTACGCCTCCTCCATGTGCATCGCGCTGCACTG
GCTCGAAGGCCGCGGCGAAGGGGCGACAGCGCGGCGCCGCGCGGCCGCGGCATTCGCCGAGTGCGAGGCCGTGGAGCGGC
GGTGCGGCGCGGAGCTCGCCAAGTGCGGGTCCAACCTGCGCAAGCTCGGCGAGAGGGCGCTTCACACCAGGCACCCTTCC
GGCGGCAGAGCGCAGTGCGAGGAGTCCCTGGCCGGCGCGCGCGCGACGGCGCTTCTTGCCGTGGGAGCCCTCGGCGTTGC
GCTGGCGTTCCGGTCGCGCCGTGCCGTTCCCGGCATCGCGCACGCCGGCGGCGGCAAGGGCGGAGCGGTGCCCTGGGAGT
GCGCGCTCCAGGAGGTGCAGAAGCACGTCAAGGACGAGTACGAGCGCCGCAGGAAAGAAGGTGTGCCGTGCATGGCCGAG
CTCGACGCCGCGGCCGCCGACGGCCGGACGGTGAAAAGCGCACTGACCACGGGCGGCCGGCACCTGTCGGAGACCGCGGT
TGCGGCGGCGAAGAGGAGGTGCGACGAGCTGGAGGACAAGGTGTCTGTGCTCGAGGAAAGCATCGGCGAGCTGCATAGGG
AGCTCATAAGCGTTAGGATGGTGCTCCTGGAGTGGTCACAGAGTGCAAGAGGGCATGAGGTTCTCAGGTTGTGA------
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---------------------------------------------------
>chr4B_1_TraesCS4B01G090400
GGTACACATGCACTCACTACTGCACGATGAAATACTGGTACTCCTACTAATTTGCATGCGTCATTTTTAGATTTCTGGAT
ATTCAAGATCGTGGCTAC---------------------------CATGTTCTGCTACAAAGTTATCGCAAGTGTGAAGA
GTAATGGAGGTAATTAATCTGTGTTTTTTATGACTAAAACACTATACAAGAAACACATTGTTTGGCCAAAAAGACACAGT
TGTTTCACCTAAACATCCACATATACATTTCAGTTTAGTGACACTCTTCAAGTACCGAGAGGTGAGTTGCAGGGCGAATA
ATCTGAGCCTAATCTTTCATGGATGTATCTGGCAATGGTGACAAA-TACATGTTCTTTT-CCTTGTTGGATTGCTCGGAG
ATTGTTGGAGAACCTAATGGCTTCTGTATATCTAAAGCAGGGTAGCCTCCTTTCTATTGTG-CTTTGGATCGGCTATACA
TAAATCGTCTGAAAATTTATTTTGTTAAGCCGATCTTCTCGGCCATTAGATTAAGATCTGACGACCGCCCTTCTTTCTTC
TTTCGCCCACCTTCTTCCTCCTCCAACGGTTCCTCC-GCCAATAAATCGACTTGTCG-AAATTGCAAATTCAGTAAACTT
ACATATAGCTA-TGTGCCTTTCTAAACATGTGAAGAGGAAAATGCAGGTCAAAGAAAGTGAAGAGAAATGGTGGTAACTA
ATCTGATTTTGTTT-------------------------------------------------------TTTTTTACCGT
GGTACTCTATAAGAAACACATTTCTTGGCGAAAAAGCCACAATGGATTTTT-----------------------------
-------------ACCCTACATATAATCAGCCCATAATAGAAGGCTGTACACGACATGTTAGGATGGAAAGCGTAAGCAT
GGAGCAAATTTGTGTGTTCACGCAGCATAAGG-------CACTCTCTAGATCCCAAATTTCCAATCATTCAGCACACATC
T----ACACTTTTGAGTACAGCACAGAGGCAGA------GTGATACCAAGAAGAAGAAGAAATGAGAAAAATAATACTAA
AATGAAGTCACTGTGGCAGAGGCAGGGGTATATAAAGCACCAGTCCGCC----ACGACACCAACACATCAACATCTCAAG
CTCCTTTTCTGCTCAACGCCATCTCTCCGCTGAGAAACCAAAACAACAGGAGATCACAAT--------------------
-----------------ATGAAGAAGCCATCGACGCTTCTCCGATCTCTCTCTACACGCCTCTCTGCGCGGCTCGCGCCG
TCGCCGGCGGTGGCCCCATGGCCGCCGGTGCGCTCCGCATACGACCGCTGGCTGGCCGCCGAGCTCGATGAGCTCCGCGC
CGATCCGATCGCCCCGTGCACCAGCGCCGCCTGGCTCGGCCGCGCCATCGGCCTCGCCGTCGCCGCTCAGAGACAGCTCG
TCGCGTCGGCGTCGGCGGCCCCGGCAGCCGGCATTGACCGCAAGACCATCGACGAGTGCGTGGAGGACACGGTGGAGCTG
CTTGATGCGTGCGCCGGACTCAGGGGCCGCCTCGACCTGATCAGGAGCTACGCCTCCTCCATGTGCATCGCGCTGCACTG
GCTCGAAGGCCGCGGCGAAGGGGCGACAGCGCGGCGCCGCGCGGCCGCGGCATTCGCCGAGTGCGAGGCCGTGGAGCGGC
GGTGCGGCGCGGAGCTCGCCAAGTGCGGGTCCAACCTGCGCAAGCTCGGCGAGAGGGCGCTTCACACCAGGCACCCTTCC
GGCGGCAGAGCGCAGTGCGAGGAGTCCCTGGCCGGCGCGCGCGCGACGGCGCTTCTTGCCGTGGGAGCCCTCGGCGTTGC
GCTGGCGTTCCGGTCGCGCCGTGCCGTTCCCGGCATCGCGCACGCCGGCGGCGGCAAGGGCGGAGCGGTGCCCTGGGAGT
GCGCGCTCCAGGAGGTGCAGAAGCACGTCAAGGACGAGTACGAGCGCCGCAGGAAAGAAGGTGTGCCGTGCATGGCCGAG
CTCGACGCCGCGGCCGCCGACGGCCGGACGGTGAAAAGCGCACTGACCACGGGCGGCCGGCACCTGTCGGAGACCGCGGT
TGCGGCGGCGAAGAGGAGGTGCGACGAGCTGGAGGACAAGGTGTCTGTGCTCGAGGAAAGCATCGGCGAGCTGCATAGGG
AGCTCATAAGCGTTAGGATGGTGCTCCTGGAGTGGTCACAGAGTGCAAGAGGGCATGAGGTTCTCAGGTTGTGAAGGATT
ACC--------GAACAATCACA----GAAACGATCATAGAAAATCAGTGTACATATGGATTTTGAATTTTTGAGAGATAT
TAGTAATC----TCAATTCTGTATCCAAACTCTTGGGAGATTTTTTTTTTTTTGAAACGAGGCAAAAGACTTGCCATTTC
ATTGATTAAGGGAGAAAGTTTTAGACAGAAACCGCAAAGCGGTGAA-AAAAGCACTACTCTCGCGGCATTACACCACCCA
AATGCTTCGCTCCAGCCAAAGCCCAAAGCGATACCTCCTGCTTGATTTTGCTGATGATGGTCATGGAAGGGGCCGCTGAG
TTGCGGAAGACTCTAGCATTGCGCTCCAACCAAACCTCCCAAGAGATGAGCATCATGAGGGAGGCGAGCGCCTTGGGCGA
GCTGAGACGGATCTGCAGGTTAGCGTTCCACCATTCTCTGACCGAAGCCCTTGTCACCCAGGTAGACGTGGTGATGTGAT
GCATGCCGAGCCATGGGAGGACGTCATTCCAAATGCGCATGGTGTAGCGGCACTGGAAAAGCAGATGAGCCGCGGTTTCT
TGGGTTTGCTTGCAAAGAGGGCATAGACCGCAATTAGGCCAACCACGGCGGCTCAAGCGGTCCGAAGTCCAAATCCTATC
TTGAAGAACGAGCCAAGCAAAAAACTTGCACCGAGGGGGCGCCCACACCGTCCACACCGAATGGACAAGGTCCGAGGTGG
TGAGGCCTTCAAATTGAGCCTTGTAAGCCGAGGATGCAGAATATATCCCATCTTTGGTGAACTTCCAAATAATTGAGTCT
TCAACGTCGTCATCGAGTGCCACTGTTGCTAGTTTGTCCCAAAGGTTAGCAAACTGTTGGATGTGTTCAAGGGAGAGGCC
ATTGGAGCTGTCAATATTCGCAATCCATTGGTTGCTGGCCATAGCTTGCTGAACCGAGGAGTTTTTCTTGCGAGAGAGGT
TGTAGAGACCGGGAGCTATGTCACAGGGGCACAATCCTCCTAGCCAAGATG
>chr4A_15
--------------CACTACTGCACGATGAAATAATGGTACTCCTACTATTTTGCCTGCGTCATTTTTAGATTTCTGGAT
ATTCAAGATCGTGGCTACCATGTGTTTGCTACATTGTTATTAACACATGGTATGCTACAAAGTTATGACAAGTGTGAAGA
GTAATGGAGGCAATTATTCTGTTAATGATTGCAGT-----ACTATACAAGAAGCACATTGTTTGGTGTAAAAGACACAAT
GGTTTCACCTAAACATCCACATATACATTTCTGTTTGGTGACACTCTTCGAGTACCGAGTGGCGAGTTGCAAGGCGAAAA
ATCTAAGCCTAATCTTTGTTGGATGTATCTGACAATGGTGACAAA-TACATGTTGTTTT-C-TTGTTGGACTGCTCGGAG
ATTGTTGTAGAACCTAAGGGTTTTAGTATAT---AAGCCGGGTAGTCTCCTTTCTATTGTGTCTTTGGACCGGCTATACA
TAAATCGTCTCAAAATTTATTTTCGTAAGTCGATTTTCTTGGCCATTAGATTAAGATTTG---------------TCTTC
TTTCTCCAGCTTTCCTTCTCGTCTAACCGCTCCTCCTCCCATAAAATCGACTTATGCAAAATTGCAAATTCAGTCAACTT
ACATATAGGTACTGTGCCTTTCTAAACATGTGAAGAGAAAAATGCAGGTCAAAGAAAATAAAGAGAAATGGAA-------
--------------------------------------------------------------------------------
-GTACTCTATAAGAAACACATTGCTTGGCCAAAAAGCCATAGTGGATTTGCCC---------------------------
----------AAAACTCTACATATAATCAGCCCGTAACTTAAGGCTGTACACGACATGTTAGGATGGAAAGCGTAAGCAT
GGAGCAAATTTGTGTATTCACCCAGCATAAGGATCAAGGCACTCTCTGGATCCCAAATTTCCAATCATGCAGCACACATC
TACTAACACTTTTGAGTACAGCACAGAGGCAGA------GCCATACC------AAGAAGAAATGAGGAAAATAATACTAA
AATGAAGTCACTGTGGCAGAGGCAGGGGTATATAAAGCACCACTCCGCCCGCCACTACACCAACACATCAACATCTCGAG
CTCCCTTTCCGCTCGCCACCATCTCGCCTCTAAGAAACCAAAACAACAGAAGATCATCACAAGACTCAAATCAAGGAACA
TCATTGCAATTCACAACATGAAGAAGCCATCGACGCTTCTCCGATCGCTCTCTACGCGCCTCTCTGCGCGGCTCGCGCCG
TCGCCGGCGGTGGCTCCCTGGCCGCCGGTGCGCTCCGCCTACGACCGCTGGCTGGCCGCCGAGCTCGACGAGCTCCGCGC
CGACCCGATCGCCCCGTGCACCAGCGCCGCCTGGCTCGGCCGCGCCCTCGGCCTCGCCGCCGCCGCGCAGAGACGGCTCG
TCGCGTCGGCGACGCCGGCCCCGCCGGCCGGCATTGACCGCAAGACCATCGACGAGTGCGTGGAGGACACGGCGGAGCTG
CTTGACGCGTGCGCCGGGCTCAGGGCCCGCCTCGACCTGATCAGGAGCTACGCCTCCTCCATGCGCATCGCGCTGCACTG
GCTCGAAGGCCGCGGCGGAGGGGCGACCGCGCGGCGCCGCGCGGCCGCGGCGTTCGCCGAGTGCGAGGCCGTGGAGCGCC
GGTGCGGCGCGGAGCTCGCCAAGTGCGGGTCCAACCTGCGCAAGCTCGGCGAGAGGGCGCTTCACGCCAGGCACCCTTCC
GGCGGCAGGGCGCAGTGCGAGGAGTCCCTGGCCGGCGCGCGCGCGGCGGCGCTTCTTGCCGTGGGAGCCCTCGGCGTTGC
GCTGGCGTTCCGGTCGCGCCGTGCCGTTCCCGGCATCGCGCACGCCGGCGGCGGCAAGGCCGGAGCGGCGCCCTGGGAGT
GCGCGCTCCAGGAGGTGCAGAAGCACGTCAAGGACGAGTACGAGCGCCGCAGGAAAGAGGGCGTGCCGTGCATGGCCGAG
CTCGACGCCGCGGCCGCCGACGGCCGGACGGTGAAAAGCGCGCTGACCACGGGCGGCCGGCACCTGTCGGAGACCGCGGT
TGCGGCGGCGAAGAGGAGGTGCGACGAGCTGGAGGAGAAGGTGTCTGTGCTCGAGGAGAGCGTCGGCGAGCTGCATAGGG
AGCTCATAAGCGTTAGGATGGTGCTCTTGGAGTGGTCACAGAGTGCAAGAGGGCATGAGGTTCTCAGGTTGTGAAGGATT
AGATTACTGATGAACAACCACA----GAAACGATCATAGAAA-TCCGTGTACATATGGATCTTGAATTTTTGAGAGATAT
TATTAATCTCAATCAATTCTGTGTCCAAACTCTTGGGAGATT--------------------------------------
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---------------------------------------------------
>chr4D_252
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--------------------------------------TGAGACTCTTCAAGTGCCGAGTGGTGAGTTGCAGGGCGAAAA
ATCTGAGCCTAATTTTTGTTGGATGTATCTGACAATGGTGACAAAATACATGTTGTTTCCC-TTGTTGAATTGCTCAGAG
ATTGTTGTGAACCTAAAGGGCCTTTGTATATCTAAAGCCGAGTAGCATCCTTTCTATTGTGCCTTTGGACTGGCTATACA
TAAATCGTCTGAAATTTT-TTTTGGTAGGTCGATCTTCTCGGTCATTAGATTAAGATCTAGCGACCGCCCTTCTTTCTTC
TTTCTCCCACCTTCTTCCTCCTCCAACCGTTCCTCC-CCCAATAAATCGACTTGTCG-AAATTGCAAATTCAGTAAACTT
ACATATAGCTATTGTGCCTTTCTAAACATGCGAAGAGAAAAATGCAGATCAACGAAAGGGAAGAGAAATGGTGGTAACTT
ATGGGGATTTCACCTCTTTCTTCTTTATGAAAAGTCAATGCTCCTGCTGGTTCCTCAAAAATAATCTGATTTTTTACCAT
GGTACTCCGTAAGAAACACATTGCTTGGCCAAAAAGCCACAATGGATATTTTTTCCAAAATTCTACATATAATCTCTTTT
TTTTCGGGAGAAAACTCTACATATAATTAGCCCATAATGTAAGGCTGTACACGACATGTTAGGATGGAAAGCGTAAGCAC
GGAGCAAATTTGTGTGTTCACGCAGCATAAGG-------CACTCTCTAGATCCCAAATTTCCAATCATTCAGCACACATC
T----ACACTTTTGAGTACAGCACAAAGGCAGAGGCAGTGCCATACC------AAGAAGAAATGAGAAAAATAATACTAA
AATGAAGTCACTGTGGCAGATGCAGGGGTATATAAAGCACCACTC----CGCCACTACACCAACACATCAACATCTCGAG
CTCCCTTTCCGCTCGCCACCATCTCGCCTCTAAGAAACGAAAACAACAGGTGATCACAGT--------------------
-----------------ATGAAGAAGCCATCGACGCTTCTCCGATCGCTCTCTACACGCCTCTCTGCGCGGCTCGCGCCG
TCGCCGGCGGTGGCCCCATGGCCGCCGGTGCGCTCCGCCTACGACCGCTGGCTGGCCGCCGAGCTCGACGAGCTCCGCGC
CGACCCGATCGCCCCGTGCACCAGCGCCGCCTGGCTCGGCCGCGCCATCGGTCTCGCCGCCGCCGCGCAGAGACGGCTCG
TCGCGTCGGCGACGCCGGCCCCGCCAGCCGGCATTGACCGCAAGACGATCGACGAGTGCGTGGAGGACACGGCGGAGCTG
CTTGACGCGTGCGCCGGGCTCAGGAACCGCCTCGACCTGATCAGGAGCTACGCCTCGTCCATGCGCATCGCGCTGCACTG
GCTCGAAGGCCGCGGCGGAGGGGCGACAGCGCGGCGCCGCGCGGCCGCGGCGTTCGCCGAGTGCGAGGCCGTGGAGCGGC
GGTGCGGGGCGGAGCTCGCCAAGTGCGGGTCCAACCTGCGCAAGCTCGGCGAGAGGGCGCTTCACGCCAGGCACCCTTCC
GGCGGCAGAGCGCAGTGCGAGGAGTCCCTGGCCGGCGCGCGCGCGACGGCGCTCCTTGCCGTGGGAGCCCTCGGCGTTGC
GCTGGCGTTCCGGTCGCGCCGTGCCGTTCCCGGCATCGCGCACGCCGGCGGCGGCAAGGGCGGAGCGGTGCCCTGGGAGT
GCGCGCTCCAGGAGGTGCAGAAGCACGTCAAGGACGAGTACGAGCGCCGCAGGAAGGAGGGTGTGCCGTGCATGGCCGAG
CTCGACGCCGCGGCCGCCGACGGCCGGACGGTGAAAAGCGCGCTGACCACGGGCGGCCGGCACCTGTCGGAGACCGCGGT
TGCGGCGGCGAAGAGGAGGTGCGACGAGCTGGAGGACAAGGTGTCTGTGCTCGAGGAAACCATCGGCGAGCTGCATAGGG
AGCTCATAAGCGTTAGGATGGTGCTCTTGGAGTGGTCACAGAGTGCAAGAGGACATGAGGTTCTCAGGTTGTGAAGGATT
AGATTATTAATCTCGATATGGATTTTGAAACGATCATAGAAA-TCCGTGTACATATGGATGTTGAATTTTTGAGAGATAT
TATTAATCTCAG----TTCTGTGTCCAAACTCTTG---------------------------------------------
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---------------------------------------------------
>chr7B_2232
GGAGATAC------------------------------------------------------------------------
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-------------------------------------------TTTTTTTTTTGAAACGAGGCAAAAGACTTGCCATTTC
ATTGATTAAGGGAGAAAGTTTTAGACAGAAACCGCAAAGCGGTGAA-AAAAGGACTACTCTCGCGGCATTACACCACCCA
AATGCTTCGCTCCAGCCAAAGCCCAAAGCGATACCTCCTGCTTGATTTTGCTGATGATGGTCATGGAAGGGGCCGCTGAG
TTGCAGAAGACTCTAGCATTGCGCTCCAACCAAACCTCCCAAGAGATGAGCATCATGAGGGAGGCGAGCGCCTTGGGCGA
GCTGAGACGGATCTGCAGGTTAGCGTTCCACCATTCTCTGACCGAAGCCCTTGTCACCCAGGTAGACGTGGTGATGTGAT
GCATGCCGAGCCATGGGAGGACGTCATTTCAAATGCGCATGGTGTAGCGGCACTGGAAAAGCAGATGAGCCGCGGTTTCT
TGGGTTTGCTTGCAAAGAGGGCATAGACCGCAATTAGGCCAACCACGGCGGCTCAAGCGGTCCGAAGTCCAAATCCTATC
TTGAAGAACGAGCCAAGCAAAAAACTTGCACCGAGGGGGCGCCCACACCGTCCACACCAAATGGACAAGGTCCGAGGTGG
TGAGGCCTTCAAACTGAGCCTTGTAAGCCGAGGATGCAGAATATATCCCATCTTTGGTGAACTTCCAAATAATTGAGTCT
TCAACGTCGTCATCGAGGGCCACTGTTGCTAGTTTGTCCCAAAGGTTAGCAAACTGTTGGATGTGTTCAAGGGAGAGGCC
ATTGGAGCTGTCAATATTCGCAATCCATTGGTTGCTGGCCATAGCTTGCTGAACCGAGGAGTTTTTCTTGCGAGAGAGGT
TGCGAGAGCGG----------------------------------------
>chr2B_2234
AGATTG--------------------------------------------------------------------------
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--------------------------------------------TTTTTTTTTGAAACAAGGCAAAAGACTTGCCATTTC
ATTGATTAAGGGAGAAAGTTTTAGACAGAAACCGCAAAGCGGCGAATAAAAGGACTACTCTCGCGGCATTACAACACCCA
AATGTTTCGCTCCAGCCATAGCCCAAAGCGATACCTCCTGCTTGATTTTGTCGATGATGGTCATGGAAGGGGCCGCTGAC
TTACGAAAGACTCTAGCATTGTGCTCCGACCAAACCTCCCAAGAGATGAGCATCATGAGGGAGGCGAGCGCCTTGGGCGA
GCCGAGACGGATCTTCAGGTTAGCATTCCACCATTCTCTGACCAAAGCCCTTGTCACCCAAGTAGACGTGGTGATGTGAT
GCATGCCGAGCCATATGAAGAGGTCATTCCAAATGCGCATGGTGTAGCGGCACTGGAAGAGCAGATGAGGCGCGGTTTCT
TGGGTTTGCTTGCAAAGAGGGCATAGACCGCAATTAGGCCAACCCTGGCGGCTCAAGCGGTCCGAAGTCCAAATCCTATC
TTGAAGAACGAGCCAAGCAAAAAACTTGCACCGAGGGGGCGCCCACTTCGTCCACACTGAATGGACAAGGTCCGAGGTGG
TGAGGCCTTCAAATTGAGCCTTGTAAGCCGAGGATGCAGAATATATCCCATCTTTGGTGAACTTCCATATAATTGAGTCT
TCAACGTCGTCATCGAGGGCCACTGTTGCTAGTTTGTCCCAAAGGTTAGCAAATTGTTGTATGTGTTCAAGGGAGAGGCC
ATTGGAGCTGTCAATGTTCGCAATCCATTGATCGTTGGTCATAGCTTGCTGAACCGAGGAGTTTTTCTTGCGAGAGAGGT
CGTAGAGACCAGGAGCAATGTCACAAGGGCACAATCCTCCTAGCCAAGATG
>chr5A_2237
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----------------------------------------TTTTTTTTTTTTTGAAACGAGGCAAAAGACTTGCCATTTC
ATTGATTAAGGGAGAAAGTTTTAGACAGAAACCGCAAAGCGGTGAA-AAAAGGACTACTCTCGCGGCATTACACCACCCA
AATGCTTCGCTCCAGCCAAAGCCCAAAGCGATACCTCCTGCTTGATTTTGCTGATGATGGTCATGGAAGGGGCCGCTGAG
TTGCGGAAGACTCTAGCATTGCGCTCCAACCAAACCTCCCAAGAGATGAGCATCATGAGGGAGGCGAGCGCCTTGGGCGA
GCTGAGACGGATCTGCAGGTTAGCGTTCCACCATTCTCTGACCGAAGCCCTTGTCACCCAGGTAGACGTGGTGATGTGAT
GCATGCCGAGCCATGGGAGGACGTCATTCCAAATGCGCATGGTGTAGCGGCACTGGAAAAGCAGATGAGCCGCGGTTTCT
TGGGTTTGCTTGCAAAGAGGGCATAGACCGCAATTAGGCCAACCACGGCGGCTCAAGCGGTCCGAAGTCCAAATCCTATC
TTGAAGAACGAGCCAAGCAAAAAACTTGCACCGAGGGGGCGCCCACACCGTCCACACCGAATGGACAAGGTCCGAGGTGG
TGAGGCCTTCAAATTGAGCCTTGTAAGCCGAGGATGCAGAATATATCCCATCTTTGGTGAACTTCCAAATAATTGAGTCT
TCAACGTCGTCATCGAGGGCCACTGTTGCTAGTTTGTCCCAAAGGTTAGCAAACTGTTGGATGTGTTCAAGGGAGAGGCC
ATTGGAGCTGTCAATATTCGCAATCCATTGGTTGCTGGCCATAGCTTGCTGAACCGAGGAGTTTTTCTTGCGAGAGAGGT
TGTAGAGCCCGGGAGCTATGTCACAGGGGCACAATCCTCCTAGCCAAGATG
>chr7B_2239
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------------------------------------------TTTTTTTTTTTGAAACGAGGCAAAAGACTTGCCATTTC
ATTGATTAAGGGAGAAAGTTTTAGACAGAAACCGCAAAGCGGTGAA-AAAAGGACTACTCTCGCGGCATTACACCACCCA
AATGCTTCGCTCCAGCCAAAGCCCAAAGCGATACCTCCTGCTTGATTTTGCTGATGATGGTCATGGAAGGGGCCGCTGAG
TTGCGGAAGACTCTAGCATTGCGCTCCAACCAAACCTCCCAAGAGATGAGCATCATGAGGGAGGCGAGCGCCTTGGGCGA
GCTGAGACGGATCTGCAGGTTAGCGTTCCACCATTCTCTGACCGAAGCCCTTGTCACCCAGGTAGACGTGGTGATGTGAT
GCATGCCGAGCCATGGGAGGACGTCATTCCAAATGCGCATGGTGTAGCGGCACTGGAAAAGCAGATGAGCCGCGGTTTCT
TGGGTTTGCTTGCAAAGAGGGCATAGACCGCAATTAGGCCAACCACGGCGGCTCAAGCGGTCCGAAGTCCAAATCCTATC
TTGAAGAACGAGCCAAGCAAAAAACTTGCACTGAGGGGGCGCCCACACCGTCCACACCGAATGGACAAGGTCCGAGGTGG
TGAGGCCTTCAAATTGAGCCTTGTAAGCCGAGGATGCAGAATATATCCCATCTTTGGTGAACTTCCAAATAATTGAGTCT
TCAACGTCGTCATCGAGGGCCACTGTTGCTAGTTTGTCCCAAAGGTTAGCAAACTGTTGGATGTGTTCAAGGGAGAGGCC
ATTGGAGCTGTCAATATTCGCAATCCATTGGTTGCTGGCCATAGCTTGCTGAACCGAGGAGTTTTTCTTGCGAGAGAGGT
TGTAGAGCCCGGGAGCTATGTCACAGGGGCACAATCCTCCTAGCCAAGATG
>chr6B_2239
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------------------------------------------TTTTTTTTTTTGAAACGAGGCAAAAGACTTGCCATTTC
ATTGATTAAGGGAGAAAGTTTTAGACAGAAACCGCAAAGCGGTGAA-AAAAGGACTACTCTCGCGGCATTACACCACCCA
AATGCTTCGCTCCAGCCAAAGCCCAAAGCGATACCTCCTGCTTGATTTTGCTGATGATGGTCATGGAAGGGGCCGCTGAG
TTGCGGAAGACTCTAGCATTGCGCTCCAACCAAACCTCCCAAGAGATGAGCATCATGAGGGAGGCGAGCGCCTTGGGCGA
GCTGAGACGGATCTGCAGGTTAGCGTTCCACCATTCTCTGACCGAAGCCCTTGTCATCCAGGTAGACGTGGTGATGTGAT
GCATGCCGAGCCATGGGAGGACGTCATTCCAAATGCGCATGGTGTAGCGGCACTGGAAAAGCAGATGAGCCGCGGTTTCT
TGGGTTTGCTTGCAAAGAGGGCATAGACCGCAATTAGGCCAACCACGGCGGCTCAAGCGGTCCGAAGTCCAAATCCTATC
TTGAAGAACGAGCCAAGCAAAAAACTTGCACCGAGGGGGCGCCCACACCGTCCACACCGAATGGACAAGGTCCGAGGTGG
TGAGGCCTTCAAATTGAGCCTTGTAAGCCGAGGATGCAGAATATATCCCATCTTTGGTGAACTTCCAAATAATTGAGTCT
TCAACGTCGTCATCGAGGGCCACTGTTGCTAGTTTGTCCCAAAGGTTAGCAAACTGTTGGATGTGTTCAAGGGAGAGGCC
ATTGGAGCTGTCAATATTCGCAATCCATTGGTTGCTGGCCATAGCTTGCTGAACCGAGGAGTTTTTCTTGCGAGAGAGGT
TGTAGAGACCGGGAGCTATGTCACAGGGACACAATCCTCCTAGCCAAGATG
>chr1B_2239
TTTA----------------------------------------------------------------------------
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----------------------------------------------TTTTTTTGAAACAAGGCAAAAGACTTGCCATTTC
ATTGATTAAGGGAGAAAGTTTTAGGCAGAAACCGCAAAGCAGTGAATAAAAGGACTACTCTCGCGGCATTACAACACCCA
AATGCTTCGCTCCAGCCAAAGCCCAAAGCGATACCTCCTGCTTGATTTTGCTGATGATGGTCATGGAAGGGGCCGCTGAG
TTGCGGAAGACTCTAGCATTGCGCTCCGACCAAACCTCCCAAGAGATGAGCATCATGAGGGAGGCGAGCGCCTTGGGCGA
GCTGAGACGGATCTGCAGGTTAGCGTTCCACTATTCTCTGACCGAAGCCCTTGTCACCCAGGTAGACGTGGTGATGTGAT
GCATGCCGAGCCATGGGAGGATGTCATTCCAAATGCGCATGGTGTAGCGGCACTGGAAAAGCAGATGAGCCGCGGTTTCT
TGGGTTTGCTTGCAAAGAGGGCATAGACTGCAATTAGGCCAACCACGGCGGCTCAAGCGGTCCGAAGTCCAAATCCTATC
TTGAAGAACGAGTCAAGCAAAAAACTTGCACCGAGGGGGCGCCCACACCGTCCACACCGAATGGACAAGGTCCGAGGTGG
TGAGGCCTTCACATTGAGCCTTGTAAGCCGAGGATGCAGAATATATCCCATCTTTGGTGAACTTCCAAATAATTGAGTCT
TCAACGTCGTCATCGAGGGCCACCGTTGCTAGTTTGTCCCAAAGGTTAGCAAACTGTTGGATGTGTTCAAGGGAGAGGCC
ATTGGAGCTGTCAATATTCGCAATTCATTGATTGTTGGCCATAGCTTGCTGAACCGAGGAGTTTTTCTTGCGAGAGAGGT
TGTAGAGACCGGGAGCTATGTCACAGGGGCACAATCCTCCTAGCCAAGATG
>chr3A_2240
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-------------------------------------------TTTTTTTTCTGAAACAAGGCAAAAGACTTGCCATTTC
ATTGATTAAGGGAGAAATTTTTAGACAGAAACCGCAAAGCGGTGAATAAAAGGACTACTCTCGCGGCATTACAACACCCA
AATGCTTCGCTCCAGCCAAAGCCCAAAGCGATACCTCCTGCTTGATTTTGCTGATGATGGTCATGGAAGGGGCCGCTGAG
TTGCGGAAGACTCTAGCATTGCGCTCCGACCAAACCTCCCAAGAGATGAGCATCATGAGGGAGGCGAGCGCCTTGGGCGA
GCTGAGACGGATCTGCAGGTTAGCGTTCCACCATTCTTTGACCGAAGCCCTTGTCACCCAGGTAGACGTGGTGATGTGAT
GCATGCCGAGCCATGGGAGGACGTCATTCCAAATGCGCATGGTGTAGCGGCACTGGAAAAGCAGATGAGCCGCG-TTTCT
TGGGTTTGCTTGCAAAGAGAGCATAGACCGCAATTAGGCCAACCACGGCGGCTCAAGCGGTCCGAAGTCCAAATCCTATC
TTGAAGAACGAGTCAAGCAAAAAACTTGCACCGAGGGGGCGCCCACACCGTCCACACCGAATGGACAAGGTCCGAGGTGG
TGAGGCCTTCAAATTGAGCCTTGTAAGCCGAGGATGCAGAATATCTCCCATCTTTGGTGAACTTCCAAATAATTGAGTCT
TCAATGTCGTCATCGAGGGCCACTGTTGCTAGTTTGTCCCAAAGGTTAGCAAACTGTTGGATGTGTTCAAGGGAGAGGCC
ATTAGAGCTGTCAATATTCGCAATCCATTGATTGCTGGCCATAGCTTGCTGAACCGAGGAGTTTTTCTTGCGAGAGAGGT
TGTAGAGACCGGGAGCTATGTCACAGGGGCACAATCCTCTTAGCCAAGATG
>chr2A_2242
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---------------------------------------------TTTTTTTTGAAACAAGGCAAAAGACTTGCCATTTC
ATTGATTAAGGGAGAAAGTTTTAGACAGAAACCGCAAAGCGGTGAATAAAAGGACTACTCTCGCGGCATTACAACACCCA
AATGCTTCGCTCCAGCCAAAGCCCAAAGCGATACCTCCTGCTTGATTTTGCTGATGATGGTCATGGAAGGGGCCGCTGAG
TTGCGGAAGACTCTAGCATTGCGCTCCGACCAAACCTCCCAAGAGATGAGCATCATGAGGGAGGCGAGCGTCTTGGGCGA
GCTGAGACGGATCTGCAGGTTAGCGTTCCACCATTCTCGGACCGAAGCCCTTGTCACCCAGGTAGACGTGGTGATGTGAT
GCATGCCGAGCCATGGGAGGACGTCATTCCAAATGCGCATGGTGTAGCGGCACTGGAAAAGCAGATGAGCCGCGGTTTCT
TGGGTTTGCTTGCAAAGAGGGCATAGACCGCAATTAGGCCAACCACGGCGGCTCAAGCGGTCCGAAGTCCAAATCCTATC
TTGAAGAACGAGCCAAGCAAAAAACTTGCACCGAGGGGGCGCCCACACTGTCCACACCGAATGGACAAGGTCCGAGGTGG
TGAGGCCTTCAAATTGAGCCTTGTAAGCCGAGGATGCAGAATATCTCCCATCTTTGGTGAACTTCCAAATAATTGAGTCT
TCAACGTCGTCATCGAGGGCCACTGTTGCTAGTTTGTCCCAAAGGTTAGCAAACTGTTGGATGTGTTCAAGGGAGAGGCC
ATTGGAGCTGTCAATATTCGCAATCCATTGATTGCTGGCCATAGCTTGCTGAACCGAGGAGTTTTTCTTGCGAGAGAGGT
TGTAGAGACCGGAAGCTATGTCACAGGGGCACAATCCTCCTAGCCAAGATG
>chr5B_2243
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----------------------------------------------TTTTTTTGAAACGAGGCAAAAGACTTGCCATTTC
ATTGATTAAGGGAGAAAGTTTTAGACAGAAACCGCAAAGCGGTGAA-AAAAGGACTACTCTCGCGGCATTACACCACCCA
AATGCTTCGCTCCAGCCAAAGCCCAAAGCGATACCTTCTGCTTGATTTTGCTGATGATGGTCATGGAAGGGGCCGCTGAG
TTGCGGAAGACTCTAGCATTGCGCTCCAACCAAACCTCCCAAGAGATGAGCATCATGAGGGAGGCGAGCGCCTTGGGCGA
GCTGAGACGGATCTGCAGGTTAGCGTTCCACCATTCTCTGACCGAAGCCCTTGTCACCCAGGTAGACGTGGTGATGTGAT
GCATGCCGAGCCATGGGAGGACGTCATTCCAAATGCGCATGGTGTAGCGGCACTGGAAAAGCAGATGAGCCGCGGTTTCT
TGGGTTTGCTTGCAAAGAGGGCATAGACCGCAATTAGGCCAACCACGGCGGCTCAAGCGGTCCGAAGTCCAAATCCTATC
TTGAAGAACGAGCCAAGCAAAAAACTTGCACCGAGGGGGCGCCCACACCGTCCACACCGAATGGACAAGGTCCGAGGTGG
TGAGGCCTTCAAATTGAGCCTTGTAAGCCGAGGATGCAGAATATATCCCATCTTTGGTGAACTTCCAAATAATTGAGTCT
TCAACGTCGTCATCGAGGGCCACTGTTGCTAGTTTGTCCCAAAGGTTAGCAAACTGTTGGATGTGTTCAAGGGAGAGGCC
ATTGGAGCTGTCAATATTCGCAATCCATTGGTTGCTGGCCATAGCTTGCTGAACCGAGGAGTTTTTCTTGCGAGAGAGGT
TGTAGAGACCGGGAGCTATGTCACAGGGGCACAATCCTCCTAGCCAAGATG
>SNPs
----SSSSSSSSSS--------------------S--------------S-----S------------------------
-------------------------------------------------S-S--------------SS------------
----------S-----S-----SSS-SS-SSS-S-SSSSS------------S------------SSS----------S-
S------------------------------S----S----------------------S------------------S-
-----------------SS------------S----------------------S------S------------------
-------S---------S-----S--------------S------------------------------S----------
------------------------S----S------------------------------S-------------------
----S----------------------S---------S------------------------------------------
-------------------------------------S-----------------------------------------S
--SS-SS---SSSS----------------------------------------------------------------S-
----------------------S------S--------------------------------------------------
---------------S----------------------SS----------------------------------------
--------------------------------------------------------------------------------
----------------------------------------SS-----SSSSSS---------------------------
------------------------------------------S------------S---------------------S--
----S----S----SS-S-------S--S--S------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------S-----------------------------S-----------
---S-------------------------------------------------------S------S-------S-----
-----------S--S--------S------------------------------------------------S-------
-----S-----------S-------S-------------------------------------S----------------
-----------------S---------------------------------S----------------------------
-----------------------------------------------------------------S--------------
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----------------------------------------------------------S---------------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
-SS--------------S------------------------S--S--------------S-------------------
--S-------------------S---------------------------------------------------------
----------------------------------------------------S---------------------------
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-----------------S--------------------------------------------------------------
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---------------------------------------------------
>forward_1082
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----------------------TACAGCACAGAGGCAGAGTG--------------------------------------
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>reverse_2267
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--------------------------CTGGAGTGGTCACAGAGTGC----------------------------------
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---------------------------------------------------
>forward_1327
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---------------------------CATCGACGCTTCTCCGATCT---------------------------------
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---------------------------------------------------
>reverse_2533
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----------------------------------------------------CACTACTCTCGCGGCATTACA-------
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---------------------------------------------------
