>input_sequence_59972
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-CTATAAAGGGAG---AGCAACATC-ATCTATCCATCGACCAAAGCTATGCTATTGCTATTGCTAGCGGTTGTGCTCTGC
TCGCGTGCCTAGCTACATTTGACTTGCTTC----CATCTCA--CATCCACCCAACTCAAGGAGGATCTACTATTCCATA-
--CTACCAGA--CTAGGTAGCAG---CAGCAGCAGCAGTAGGATCGTCCATGGATGAGCTGTGGAAGGACATGTCGCTGT
GCTCCACCCCGGTGGCGCTACAGTCGTACCACCTCCACTCGCCGGCCGCCCATCCCTACCGCGGCGCCGTG---TACCTG
CAGGACTACCTCGCCGGCGCCAACTCGGTGCCGCAGCCGCCGCGAACGCCGCCGCCGCCGCCTC---CTCACACGGCGCT
CAGCCTCGAGTTCACCAACCTCGGGGGC---------GCCAACTCGGCCGCCAGCTCCGGCGACGACCCTGT------CC
ACTTTGGATTCTCTCTCTCCGGAGGCAACAACAGTAGGAGGAGACCAGCCGTCCTGCA------GCCGGCGGCGGTGGGT
GGCGACCGGCGGCAGCGTCGGATGATCAAGAACCGGGAGTCGGCGGCGCGGTCGCGGGCGCGGAAGCAGGCCTACACCAA
CGAGCTGGAGCTGGAGCTGGAGCAGCTGCGTAGGGAGAACCAGATGCTCATCCAGCGCGAGAAGGACTTCATCAACGTAC
GT-----ATCTATCCTCTCGA-----TCTGTCGTTGCCATTTAGTTACTGTAGTTTGATTATTATTACGTGCTAGATATT
CGAAGCATTACGATGATTGCATACGTATTGCATTGTTGGCTTGCAGGATCGTCAGGCGAAGGCGGCGCAGTTAGCCGTCC
CCGACCGCCGGAGCG---GTAGGAACACTGCTAGTAGCCTCCAGCAGAAGCAGCAGCAGC------AACAGAGGTGCCGC
TCGGCCCCTCCACCATGATTGGCG----------CGGCGGCCGTGGACTGTAGCAGCAGCAGCTCCATTCCACTTA---C
AATGGATGGATTCTCCAAGCTAGTTAGCTACTCTACTA------GATGACTTGACTAGCATTGGGGCTCTCATTATTCAC
TACGTA-----TGTACTGTGTAAGATTTCTTGCTTAAGCA----------------------------------------
--------------------------------------------------------------------------------
--------AGTAGTTAACTACCGTAGCACTTGCTTAGAGTAATATGATGAGTCCCTCTCCGTA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr2D_1_TraesCS2D01G495700
CATACATCTTCGCAACTATTAGGTGTGAGCAAAATGGCACGTACTAGGTTCTCAAAAAAAAAAAAAATGGCA-CGTACCA
CAACTTCTAGTTTGTGTCTGGTTGATATACTAAGCATGGATTGGTACATGGCACACGACAAGTTAGGCTAGCTTAACTAA
ATTAACCAGATGGTTATTTTGCTGCAAACAAACTGTCATTGTGACTTGAAAACTGTGGAAAATCTTTTATTTGTGGCGAA
GTGTGAGTGTGACATAAATTTTGATCACCTAATATATGTTCGATATGTTTATGTCTAAAAGTCTATCAAATGGCAGAAAA
CATGTTGTTTTGAAAATTTCAAAAATCACATTAGGAAGTTTCAAAATATTCTGAGAAAAAAATTACACACTGACATATAG
ATATATACTACATGTGTAAAA--TTTCTTGAGAAAAAACATTGACACGCGAGCTACAAAAAGAAAAGAAAAAATCTTTGG
TTTTTTTAGAAAACAGTATATGCACTGGTCACTGTTTTCAAAACCGCAATTTATCGTTTTTGTGTAGCTCGCATGGCAAT
GTATTTCTCATAAAATAATTCACACATATAATACACGTCCATATATATGTCAAAGTGTAGTTTTTTTTAAATG--AACCA
TAAAATGTGATTTT----TTTTTTCTAAGGCTGCACTCGCCAAA-------------------TGGAGTACATACTAGTG
TCCAATTGTGGGATTTATGTA-TATAGCCGGCCATTGCACTAGACTGTGG-------GTAGTAGAGGAAGGACTGGAGTC
AGCTCGGGGTATGCTGGCTAGCTCGCTGTCGTGGAACAGTGTAGTAAGAGTACCAACGGTGTGCATGG-CAGTAGGCCCG
ATTCCTCCCTAGCTAAAGACTAAAGTCATGTTAAAACTTAAAAGTATTCTCTCTTTTCCTTGCGTTTGCATAAACAAAAC
TTATATATAAAAGTAAAGTTGCAACGGT---CGTACGTGTGTACCTGCACCATGGATGGATGGATGGAGGAGACGCCTTG
-CTATAAAGGGAG---AGCAACATC-ATCTATCCATCGACCAAAGCTATGCTATTGCTATTGCTAGCGGTTGTGCTCTGC
TCGCGTGCCTAGCTACATTTGACTTGCTTC----CATCTCA--CATCCACCCAACTCAAGGAGGATCTACTATTCCATA-
--CTACCAGA--CTAGGTAGCAG---CAGCAGCAGCAGTAGGATCGTCCATGGATGAGCTGTGGAAGGACATGTCGCTGT
GCTCCACCCCGGTGGCGCTACAGTCGTACCACCTCCACTCGCCGGCCGCCCATCCCTACCGCGGCGCCGTG---TACCTG
CAGGACTACCTCGCCGGCGCCAACTCGGTGCCGCAGCCGCCGCGAACGCCGCCGCCGCCGCCTC---CTCACACGGCGCT
CAGCCTCGAGTTCACCAACCTCGGGGGC---------GCCAACTCGGCCGCCAGCTCCGGCGACGACCCTGT------CC
ACTTTGGATTCTCTCTCTCCGGAGGCAACAACAGTAGGAGGAGACCAGCCGTCCTGCA------GCCGGCGGCGGTGGGT
GGCGACCGGCGGCAGCGTCGGATGATCAAGAACCGGGAGTCGGCGGCGCGGTCGCGGGCGCGGAAGCAGGCCTACACCAA
CGAGCTGGAGCTGGAGCTGGAGCAGCTGCGTAGGGAGAACCAGATGCTCATCCAGCGCGAGAAGGACTTCATCAACGTAC
GT-----ATCTATCCTCTCGA-----TCTGTCGTTGCCATTTAGTTACTGTAGTTTGATTATTATTACGTGCTAGATATT
CGAAGCATTACGATGATTGCATACGTATTGCATTGTTGGCTTGCAGGATCGTCAGGCGAAGGCGGCGCAGTTAGCCGTCC
CCGACCGCCGGAGCG---GTAGGAACACTGCTAGTAGCCTCCAGCAGAAGCAGCAGCAGC------AACAGAGGTGCCGC
TCGGCCCCTCCACCATGATTGGCG----------CGGCGGCCGTGGACTGTAGCAGCAGCAGCTCCATTCCACTTA---C
AATGGATGGATTCTCCAAGCTAGTTAGCTACTCTACTA------GATGACTTGACTAGCATTGGGGCTCTCATTATTCAC
TACGTA-----TGTACTGTGTAAGATTTCTTGCTTAAGCA----------------------------------------
--------------------------------------------------------------------------------
--------AGTAGTTAACTACCGTAGCACTTGCTTAGAGTAATATGATGAGTCCCTCTCCGTAATAATATTAAGGGGGGA
GATGAATGAATCAATTGAGCTACGTGCGCAAATTTACGGCATTTCTTTCCATCACAAGGCCTTGGCTTGAGTGAGCGAGG
TGGCAAGAAGATAGGGGTGTGTTCGGGTGCATGCATACCATGTAGCTTGCTTGCCTGCACGTGGCTGGCTGCATTATTGA
AGCAGATTTTCTTTGACGTTTGGTGGCCTGCGTTAGCCACTAGATGTTTTTTTCTCGCATACACTGGACATGATTAAGGG
TTAACAT-------------------------------CTACCTATGACACAAAAAGTACTCGGCAACAAGCATGCAGC-
--------------------------------------CGTAGGCGAGCGATCCCGTTGACGGCGTGGCGAACCAGTTGC
TAGAGTTGTGGCCGCAGGGGAAGTGCGCGCAAAGGGAC---GAGGAGGGTGTCGTGGCAGAGGACTGGGAG-AGAAGTGC
AGTATGCGTGTGATGGCAACATTAGTCCAGTAGGCCAAAGGCGAGGGGGGTA------GGAGGAACGACGCCGATGGCGA
CGGCGTTGCTAGCGTTGTGGCCGCAAGGGAAGTGCACGCGAAGGGACGAGGAGGAGGGTGTCGAGGCAGAGGACTGGGAG
GAGAAGTGCAGTATGCGTGTGATGGCGACGTTAGTCCAGTAGGCCACGGGCGAGG--GGGCGAGAGGAACGACGCCGATG
GCGATGGCGACGGCGGGAATGACATGGTTTCCATGCGGCAAGGTTGACGAATAAGAGTGAGAACAGAAAGTAGTCACTTT
GAATTTCTAAACCATAACATGAACACTTTAGTACAGTTTAACAGGGAGATACACATATACTCGTCTACGACCGTTGAAAC
AAAAAACGTACAACACGAAAGTCGTGTGAAACAGCGAGATAAAGCTACCAGCCAGAGGAAATTCCAAACGATCCACCATG
TGCGACTAATTTGGCAAAATTCATTCAAAATAGTTTCAAACATGAACACACAATTGAACATTTACAAGATAAATCTACTG
GTCAAAGGAAATTCCAAATGGTCGA
>chr2A_64
---------------------------------------------------------------AAAATGGCATCGTACGG
CAACTTCTAGTTTGTGTCTGGTTGATATACTAAGCATGGATTGGTACATGGCACACAACAAGTTAGGCAAGCTTAATTAA
ATTAACCAGATGTTTA-------GCTAACAAACTGTAATTGTGACTTGAAAACTGTGGAGAATCTTTTATTTGTGGTGGA
GTGTGAGTGTGACACAAATTTTGATCACCTAATATATGTTCAATATGTTTGAGTATAAAAGTCTATCAAATGGCAGAAAA
CATGTTGTTTTGAAAATTTCAAAAATCACATTTGAAAGTTTCAAAATATTCTGAG-AAAAAATTACATACTGACATATAA
ATATATACTACATGTGTGTAAACTTTCATGAGAAAAACCATCGACACGCGAGCTACAAAAA-AAATGAAAAAGTATCTGG
TC-TTTTAGAAAACAGTATATGCACTGGTCACTGTTTTCAAAACCGCAATTTATCATTTTTGTGTAGCTCGCATGTCAAT
GTATTTCTCATAAAATAATTCGCACATATAATACACATCC----ATATGTCAACATGTAGTTTTTTTCAAAAAAAAACTA
CAAAATGTGTTTTTTGAATTTTTTCTAAGGCTGCACTCACCAATGGTGACTACTCGGTCCTACTGTACTACATAATAGTG
TACAAGCGTGGGATTTATTATGTATAGCCGGCCATTGCACTTGACTGTGG-------GTAGTAGAGGAAGGACTGGAGTC
AGCTCGGGGTATGCTGGCTAGCTCGCTGTCGAGGAACAGTGTAGGAAGAGTACCAACGGTGTGCATGGGCAGTAGGCCCG
ATTCCTCCCTAGCTAAAGACTAAAGTCATG-------TTAAAAGTATTCTCTGTTTTCCTTGCGTTTGCATAAACAAAAC
T--TATATAAAAGTAAAGTTGCAACGGT---CGTACGTGTG------CACCATGGATGGATGGATGGAGGAGACGCCTTG
-CTATAAAGGGAG---AGCAACATC-ATCTATCCATCGACCAAGGCTATGCCATTGCTATTGCTAGCGGTTCTGCTCTGC
TCGCGTGCCTAGCTACATTTGACTTGCTTC----CATCTCA--CATCCACCCAACTCAAGGAGGATCTACTGTTCCAAA-
--CTACCAGA--CTAGGTAGCAGCAGCAGCAGCAGCAGTAGGATCATCCATGGATGAGCTGTGGAAGGACATGTCGCTGT
GCTCCACCCCGGTGGCGCTACAGTCGTACCACCTCCACTCGCCGGCCGCTCATCCCTACCGCGGCGCCGTG---TACCTG
CAGGACTACCTCGCCGGCGCCAACTCGGTGCCGCAGCCGCCCCGCACGCCGCCTCCTCCACCTC---CTCACACGGCGCT
CAGCCTCGAGTTCACCAACCTCGGGGGC---------GCCACCTCGGCCGCCAGCTCCGGCGACGACCCTGT------CC
ACTTCGGCTTCTCTCTCTCCGGAGGCAACAACAGTAGGAGGAGATCAGCCGTCCTGCA------GCCGGCCGCGGTGGGT
GGCGACCGGCGGCAGCGTCGGATGATCAAGAACCGGGAGTCGGCGGCGCGGTCGCGGGCGCGGAAGCAGGCCTACACCAA
CGAGCTGGAGCTGGAGCTGGAGCAGCTGCGTCGGGAGAACAAGATGCTCATCCAGCGCGAGAAGGACTTCATCAACGTAC
GT-----ATCTATCCTCTCGA-----TCTGTCGTTGTCATTTAGTTACTAGTTTG-----ATTATTGCGTGCTAGCTACT
CGAAGCATTACGATGATTGCGTACGTATTGCATTGTTGGCTTGCAGGATCGTCAGGCCAAGGCGGCGCAGTTAGCCGTCC
CCGACCGCCGGAGCG---GTAGGAGCACTGCTACTAGCCTCCAGCAGAAGCAGCAGCATG------AACAGAGGTGCCGC
TCGGCCCCTCCACCGTGATTGGCG----------CGGCGGCCGTGGACTGTAGCAGCAGCAGCTCCATTCCACTTAGTAC
AATGGATGGATTCTCCAAGCTAGTTAGCTAGTCTACTA------GATGACTTGACTAGCATTGGAGCTCTCATTATTAAC
TACGTATGTACTGTACTGTGTAAGATTTCTTGTAAAATTAAGCAAGTATTCTCTCCGTCCGGAAATACTTGTCATCAAAA
TGGATAAAAAAGGATGTATCTACAACTAATATACATCTAGATACATTTCCTTTTATTGTTTTGATGACAAGTATTTTCGG
ACGGAGGTAGTAGATAACTACCGTAGCACTTGCTTAG----ATATGATGAGTCTCTCTCCGTAATAATATTAAGGTAGGA
GATGAATGAATCAATTGAGCTACGTGCACAAATTTACGGCATTTCTTTCCATCACAAGGCCTTTGCTTGAGTGAGCGAGG
TGGCAAGAAGATAGGGGTGTGTTTGGGTGCATGCATACCATGTAGCTTGCTTGCC-------GGCTGGCTGCATTATTGA
AGCAAATTTTCTTTGACGTTTGGTGGCCTGCGTATATGC-------TTTTTCTCTCGCATACACTGGACATTATTAAGGG
TTTTTTTTTGCAAGTCGGACATGATTAAGGGTTAAGAGCTACATATGACACACAAAGTACTCGGCAACTGGGTTGGACGG
TGGTTGCGGCTCCACGTTCAGCTTGACGAGCATGCAGTCGTAGGCGAGCGATCCTGTTGACGGCGTGGCGAACCAGTTGC
-AGTGCTATGGTCACAAGGGAAGTGCACGCGAAGGGATGAGGAGGAGGGTGTCGAGGCATAGGACTAGGAGGAGAAGTGC
AGTATGAGTGTGATGGCGATGTTAGTCTAGTAGGCCACGTGCGAGGGCCGGGGAGGGGGGAGGAACGACGCCGATGGCGA
CAACGTTGCTAGCGTTGTGGCTGCAAGGGAAGTGCGTGCGAAGGGACGAGGAGGAGGGTGTCGAGGCAGAGGACTAGGAG
GAGAAGTGCAGTATGCGTGTGATGGTGACGTTAGTCCAGTAGGCCACGGGCGAGGAGGGGCGGGAGGAACGACGCCGATG
GTGATCGCGACAGCGGGAACGACATGGTTTCCATGCGGCAACGTTGACGAATAAGAGTGAGAACAGAAAGTAGTCACTTC
GAATTTCTAAACCATAACATGAACACCTTAGTACAGTAAAATAGGGAGATACACATATACTCATCTACGACCGTTGAAAC
GAAAAACGTACAACAAGAAAGTCATATGAAACAGCGAGATAAAGCTACCGGTCAGTGGAAATTCCAAACGGTCCACCATG
TGCGACTAATCTGGCAAAATTCATCCAAAATAGCTTCAAACATGAACACAAAATTGAACATTTACACGATAAAGCTACTG
GTCAGAGGAAATTCCAAATGGTCGA
>chr2B_683
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------CATACTAGTG
TACAAGTGTGGGAT---TTATGTATAGCCGGCCATTGCACTTGACTGTGGTCTGTGGGTAGTAGGGGAAGGACAGGAGTC
AGCTCGGGGTATGCTGGCTAGCTCGCTGTCGAGGAACAGTGTAGTAGGAGTACCAACGGTGTGCATGGGCAGTAGGCCCG
ATTCCTCCCTAGCTAAAGACTAAAGTCACG-------TTAAAAGTATTCTCTCTTTTCCTT---------------AAAC
TTATA-ATAAAAGTAAAGTTGCAACGGT---CGTACGTGTG------CACCAT----CGATGGATGGAGGAGACGCCTTG
-CTATAAAGAGAG---AGTAAC----ATCTATCTATGGACCAAAGCTATGCTACTGCTATTGCTACCGGTTGTGCTCTGC
TCGCGTGCCTAGCTACATTTGACTTGCTTC----CATCTCA--CATCCACCCAACTCAAGGAGGATCTACTATTCCATA-
--CTACCAGACTCTAGGTAGCAG---CAGCAGCAGCAGCAGGATCGTCCATGGATGAGCTGTGGAAGGACATGTCGCTGT
GCTCCACCCCGCTCGCGCTACAGTCGTACCGCCTCCACTCGCCGGCCGTCCATCCCTACCGCGGCGCCGTG---TACCTG
CAGGACTGCCTCGCCGGCGCCAACTCGGTGCCGCAGCCGCCCCGCACGCCACCGCCCCCGCCTC---CTCACACGGCGCT
GAGCCTCGAGTTCACATACCTCGGGGGC---------GCCACCTCGGCCGCCA---------------------------
---------------------------ACAACAGTAGCAGGAGATCAGCCGTCCTGCA------GCCGGCCGCGGTGGGT
GGCGACCGGCGGCAGCGTCGGATGATCAAGAACCGGGAGTCGGCGGCGCGGTCGCGGGCGCGGAAGCAGGCCTACACCAA
CGAGCTGGAGCTGGAGCTGGAGCAGCTGCGTAGGGAGAACAAAATGCTTATCCAGCGCGAGAAGGACTTCATCAACGTAC
GTGTACTATCTATCCTCTCGA-----TCTGTCGTTGCCATTTAGTTGCTAGTTTG-----ATTATTGTGTGCTAGCTACT
CGAAGCATTACGATGAGTGCGTATGTATTGCATTGTTGGCTTGCAGGATCGTCAGGCCAAGGCGGCGCAGTTAGCCGTCC
CCGACTGCCGGAGCG---GTAGGAGCACTGCTAGTAGCCTGCAGCTGAAGCAGCAG---C------AACAGAGGTGCCGC
TCGGCTCCTCCACCATGATTGGCG----------CGGCGGCCGTCGACTGTAGCAGCAGCAACTCCATTCCACTT---AC
AATGGATGGATTCTCCAAGCTAGTTAGCTACTCTACTACTCCTAGATGACTTGACTAGCATTGGGGCTCTCATTATTCAC
TACGTG-----TGTACTGTGTAAGATTTCTTGCTTAAGCA----------------------------------------
--------------------------------------------------------------------------------
--------AGTAGTTAACTACCGTAGCACTTGCTTAGAGTAATATGATGATTCTCTCTCCGTAATAATATTAAGGGAACA
GATGAATGAATCGATTGAGCTACGTGCGCAAATTAACGGCATTTCTTTCCATCACAAGGCCTTTGCTTGAGTGAGCGAGG
TGGCAAGAAGATAGGGATGTGTTTGATTGCTTGCAT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr2B_935
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------AGTAAAGTTGCAGGGTACTACGTACGTGTG------CACCAT----GGATGGATGGAAGAGACGGCGTG
GCTATAAAGACGGAGCAGCAACATC-ATCTATCTATCCACCAAATATCTCTCTGCTTGCATTGC------------CTGC
CTGCCTGCCTAGCTACATTTGACTTGCTTC----GATCCATTCCATCCACTCAACTCAAGGAAGATCTACTGTAC----T
CCCTCCCATA--CTAGCCGAGGTTCGTTGGGTAGGA--TAAGATCATCGATGGAGGAGGTGTGGAACGACATGTCGCTGT
GCTCCACCCCGCTCGCGCTACAGTCGTACCACCTCCACTCCCCGGCCGCCGCTCCCTACCGCGGCGCCGCTGTCTACCCC
CAGGACTACCTGGCCGGCGCG------------------CCCCGCACGCCGCCG---------T---CTCACACGGCGCT
CACCCTGGAGTTCACCTGCCCCGGGGGGACCGGCGCTGCCAACACGGCCACCAGCTCCGGCGACGACCCAGCCGGCTGCC
ACTTTGGCTTCTCCGCGTCCGGAGGCGGCACCAGGAGG---------GCCGTGGTCCAGCCGGCGCCGG---CGGTGGGC
GGCGACCGGCGGCAGCGCCGGATGGTCAAGAACCGGGAGTCGGCGGCGCGGTCGCGGGCGAGGAAGCAGGCCCACACCAA
TGAGATGGAGCTGGAGCTGGAGCAGCTGCGCCGGGAGAACAGGATGCTTATCCAGCGCGAGCAGGACTTCATCAACGTAC
GT-----ACGTATACACACGGCAATTTCTCTCTTTGCCATTTAGTTACTGTACCAGTTTC---ATTACCTGCTAGCGCTA
CCTAGCTGAAAATACTGGATGGTTAA----A--TGTTGGCATGCAGGATCGCTTGGCGAAAGCGGCGCAGGTAGCCGTCC
CCGACTGCAGCAGCAGCAGGAGGAACACTAGTAGTACCCTC---------CAGCAG---C------AGCAGAGGTGCCGC
TCCGCCCCTGCACCATGATCGTCG----------CGGCGGCCATCGACTCTAGCA-------------------------
--------------------------------------------------------------------------------
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-------------------------
>chr2D_976
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------ATGGATGGATGGAGGAGACGCGTGG
-CTATAAAGAGAG---AGCACCATCTATCTATCTATCGACCAAATATCTCTCTGATTGCATTGC------------CTC-
---CCTGCCTGGCTACATTTGACTTGCTTC----CATCCATTCGATCCACTCAACTCAAGGAAGATCTACTGCAC----T
CCCGCCCATA--CTAGCCGAGGTTCGTTGGGTAGGA--TAAGATCATCGATGGAGGATGTGTGGAAGGACATGTCGCTGT
GCTCCACCCCGCTCGCGCTACAGTCCTACCACCTCCACTCCCCGGCCGCCGCTCCCTACCGCGGCGCCGCTGTCTACCCC
CAGGACTACCTGGCCGGCGCG------GTTCCGCAACCGCCCCGCACGCCGCCG---------CCGGCTCACACGGCGCT
CACCCTGGAGTTCACCTGCCCCGGGGGGACCAGCGCTGCCAACACGGCCACCAGCTCCGGCGACGACCCAGCCGGCTGCC
ACTTTGGCTTCTCCGCGTCCGGAGGCGGCAGCAGGAGG---------GCCGTGGTCCA------GCCGG---CGGTGGGC
GGCGACCGGCGGCAGCGCCGGATGGTCAAGAACCGGGAGTCGGCGGCGCGGTCGCGGGCGCGGAAGCAGGCCCACACCAA
CGAGATGGAGCTGGAGCTGGAGCAGCTGCGCCGGGAGAACAGGATGCTTATCCAGCGCGAGCAGGACTTCATCAACGTAC
GT-----ACATATCC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr2D_1068
TGCTTGCAT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TGCCTGCCTAGCTACATTTGACTTGCTTC----CATTCATTCCATCCACTCCACTCAAGCAAGATCTTCTGTCCTCGAT
CCCTCCCATA--CCAGGTAGCTT----------GGA--TAAGATCATCGATGGAGGATGTGTGGAAGGACATGTCGCTGT
GCTCCACCCCGCTCGCGCTACAGTCCTACCACCTCCACTCCCCAGCCGCCGCTCCCTACCGCGGCGCCGCC---CACCCC
CAGGACTACCTCGCCGGCGCC------GTTCCGCAGCCTCCCCGCACGCCGCCG---------C---CTCACACGGCGCT
CACCCTGGAGTTCACCTGCCCCGGGGGGACCGGCGCTGCCAACTCGGCCACCAGCTCCGGCGACGACCCAGCCGGCTGTC
ACTTTGGCTTCTCCGCGTCCGGAGGCGCCAGCAAGAGA---------GCCGCTGTGCA------GCCAG---CGGCGGGC
GACGACCGGCGGCAGCGCCGGATGATCAAGAACCGGGAGTCGGCGGCGCGGTCGCGAGCGCGGAAACAGGCCTGCACCAA
CGAGATGGAGCTGGAGCTGGTGCAGCTGCGCCGGGAGAACAGGATGCTCATCCAGCGCGAGCAGGACTTCATCAACGTAC
---------------ACACGGCTACTTCTCTCTTTGCCGTTTACTCCGTAATTAT-----------------------TA
GCTACCTGAAAATGTTACTACTCCGTTTGTA--TGTTGGCATGCAGGACCGTTTGGCGAAGGCGGCGCAGGCACCCGTCC
CAGACTGCAGCAGCG------GGACCACTAGTAGTACCCTCCAGCAGAAGCAGCAG---CGGCAGAAGCAGAGGTGCCGC
TCCGCCCCTGCGCCATGAATCCATGATCGCCGGCCGTCGACGGTCGACTGTAGCAGCAGCTT---CATTCCACTT---AC
AATGGATTGATTGTCCAAGCTATCTAGCTAGCTAGCTA------GATGACTTATTCAGCACTGG----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr2A_1068
TGCTTGCAT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-TGCCTGCCTAGCTACATTTGACTTGCTTC----CAT----TCCATCCACTCAACTCAAGCAAGATCTACTGTAA-----
----------------GTAGCTT----------GGA--TAAGATCATCGATGGAGGAGCTGTGGAAGGATATGTCGCTGT
GCACCACCCCGCCCGCGCTACAGTCTCACCACCTCCACTCCCCGGCCGCCGCTCCCTACCGCGGCGCCGCC---CACCCC
CAGGACTACCTCGCCGGCGCC------GTTCCGCAGCCTCCCCGCACGCCGCCG---------C---CTCACACGGCGCT
CACCCTGGAGTTCACCTGCCCCGGGGGGACCGGCGCTGCCAACTCGGCCACCAGCTCCGGCGACGACCCAGCCGGCTGTC
ACTTTGGCTTATCCGCGTCCGGAGGCGCCAGCAAGAGA---------GCCGCTGTGCA------GCCAG---TGGCGGGC
GGCGACCGGCGGCAGCGCCGGATGATCAAGAACCGGGAGTCGGCGGCGCGGTCGCGAGCGCGGAAACAGGCCTGCACCAA
CGAGATGGAGCTGGAGCTGGCGCAGCTGCGCCGGGAGAACAGGATGCTAATCCAGCGCGAGCAGGACTTCATCAACGTAC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr2B_1081
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TGCCTAGCTACATTTGACTTGCTTCGATCCAT----TCCATCCACTCAACTCAAGGAAGATCTACTGTAC----T
CCCTCCCATA--CTAGGTAGCTT----------GGA--TAAGATCATCGATGGAGGAGCTGTGGAAGGACATGTCGCTGT
GCTCCACCCCGCTCGCGCTACAGTCCTACCACCTCCACTCCCCGGCCGCCGCTCCCTACCGCGGCGCCGCC---CACCCG
CAGGACTACCTCGCCGGCGCC------GTTCCGCAGCCTCCCCGCACGCCGCCG---------C---CTCACACGGCGCT
CACCCTGGAGTTCACCTGCCCCGGCGGGACCGGCGCTGCCAACCCGGCCACCAGCTCCGGCGACGACCCAGCCGGCTGTC
ACTTTGGCTTGTCCGCGTCCGGAGGCACCAGCAAGAGA---------GCCGCTGTGCA------GCCAG---TGGCGGGC
GGCGACCGGCGGCAACGCCGGATGATCAAGAACCGGGAGTCGGCGGCGCGGTCGCGAGCGCGGAAACAGGCCTGCACCAA
CGAGATGGAGCTGGAGCTGGCGTAGCTGCGCCGGGAGAACAGGATGCTCATCCAGCGCGAGCAGGACTTCATCAACGTAC
GT-----A------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>SNPs
SSSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------SS
--------------------------------------------------------S-----------S-------S---
------------S---SSSSSSS--S----------S----------------------S----------------S-S-
--------------S--------------------------S--------SS--S-------------------------
--------------------------------S-S--------------------S-----------S-----------S
-----------------SS--------S---------S---S-------------------S---S------S-S-S---
-SS----------------------------------------------------S-------------------S----
---------------------S--------------S---SSSS---------SS------------S---SS-----S-
S--------S----------------------------S----S---------------------S-S------------
-S---S------------SSS--------------------S--------------------------------------
-------------------------------S------------------------------------------------
------------------------------SSSSSSS-------------------------------------------
-----------------------------------------SSSSSS---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--S-----------S-----------------------
--------------------------------------------------------------------------------
-------S------------------------------------S-------------------------S---------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
----------------------------------------------------S--SSS-S---------------S----
--------------------S-----------------------------------------------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S----------------------S---
---------------------------------------------------------------S----------------
-----------------------S-------------------------------SSSSSSS------------------
----S----------------------------SSSSSSSSSSSSS-----S-------------------S--------
--SSSS------------------------------------S---------S---------------SS-SS--S-SS-
------------------------------------------------------S-------------------------
S--S-S-S---S-S--S---------S---S------S----------------S----S------S-------------
------S----------S-SS------S---------SSS-------SS-SS----------------------------
-SS------------------S-------------SS--------------------------------------S----
-------------------------S------------------------------------S-----------------
-S---S-----S-------S---------------------S-------------------------------------S
--------------------------S----------SS--S--------------------S-----------------
S--------------S-------S-S-----------------------S-S---S--------------S---------
----------S-------------S--------S----------------S---------------S------S------
----S--------------------
>forward_42
----------------------GTGTGAGCAAAATGGCACGT--------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>reverse_1528
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------ATTCTCTCTCTCCGGAGGCA-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>forward_1007
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------CGGTCGTACGTGTGTACCTG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>reverse_3066
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------CGACGTTAGTCCAGTAGGCC-----------------------------------
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-------------------------
