>input_sequence_59960
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--ATGGCGGCGAGGGCTGCATGTACCGGCCGGCTGCTCAGAGCAACCACCGCCAAGGACAGCCGTCTGCCATCGTCGTCC
CCGGCGGCCAGCCGGCCGG---------------CGTGCCGCATCCCGTCTCTCAAGTTCCCGTTCCTGTGGGACACCAA
GGCGAGGCAAGGGAAGATCAGCCGCGCCGCCGAGCAGAGGGCGGCGCTGATCACCCTGGGAGCAGCCAGCGCCAGCACCA
CGGAGGAGAAACAACTCCTGCCGGGGGAAGCGAGCAGCGTAGATCTCCTGCTGCCTCTGGCGTACGAGGTCACCAGGAGG
CTGGTGCTCAGGCAGTTCGGGGAGACGTGGCTGGCCCTCACACGGCGTCGCTGGGCCAAGGTCGCCGAGGCCGTCGTCCA
CCAGGGCATCGTCAGATGCCAATCGTTCACGCTCATCGGCGTCGCAGGATCGCTCCTCGGTTCAGTCCCATGTTTTCTCG
AGGTAATTCCGACAAATGACCCTTTATGTCACTCACTTCTCAATCAAGTGTAACCATTTATGTGATGCAAATACTGTTCG
AAATCAGGACGTCCAAGACTGATCAAACTT---TTTTTTGTGACTGTATAGGGCTGTGGTATTGTTGTTGAGTCGTTCTT
CTTGCAGTTCCGAGCCATGTCCCAGACAGTAGATCCAGCCGAGATCATCAAACTGCTCATCGAAGCATTAGGTACATGTT
CTTCATCTGG----------------CGTTCGCTTCAACA-----TGAGCTTTGCGCAAACCATAGTACTCCATGTTACT
AACTTGGGGACAAACTAATTCCTCTTCTTCCAGACATGTTTCTGATCGGCACTGCTCTGCTCACGTTTGCCATGGGGATG
TACGGCATGTTCTACGGCTCGCAGCGCGTCCAGGAGCCCATCTACGAGAGGCTGAAGAAAGGGGCGAGGATCCGGTCCGT
CACGCAGGCCAAGTCGAGGTTCGGCCACGCCGTGATCCTGCTGCTCCAGGCCGGCGTCCTCGAGAAGTTCAAGAGCGTGC
CGCTCGTCACCGGCCTCGACATGACCTGCTTCGCCGGGGCCGTGCTCGCCTCCTCCGCCGGCGTCTTCCTGCTGTCCAGG
CTCTCGGCGCATCCGCAGTCATGCAACAAGCAAGCCTCCTTCGCGTGA--------------------------------
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---
>chr5A_1_TraesCS5A01G379800
AGCATTTGGACGGACAAAAGCGCCCGATGGAGCGACGCCAAATGCAGCCCCC-ACGCCGCGAGA-ATGACAAATGTACGA
ACGAGCACACACTTGCCGGAAAAACTTCAAGCTTGAAACTTGAGAGTCTGTGCCCGTACCTTTCGGC-------------
-----GCTCCGTCCTCGTACCAGCAGGAGAGAAAACGAAGACGGCGAGCGCTTTGCGTCACGTGCCCGCGGACGAGGCCG
GAGCGCCAAGGAAGGAACGCGCCGCCGCCGCACACGCGTCCGTCCGCCCGGCGGCTCGCCCGTCCACCTCGTATCGCCTT
CCGCTGCCATCTCGTTCTCGTACCTGCCG-----TGACACACGAGCCCACGCGCGCGTCC----GGCCGACCCTTCCTAA
CAGACGGCCAGGTTTAGACGGGCGAGCCAGCGTTCCCGCCCGGCGAAAGATCTTTCTGCCCCGG----------------
-----AGGCCGGAAGGAAGTTTGCGCACGAAGTTGCAGGTTCAGAC-AACCTTTCCTCCTTCCTCC------CATCGCTC
TCTCTAGCTACTCCGAC--------GAGCGGTAGGTACATACAGCGACTCTTCGTTCCTGTCGTTTCTCGCGCCATATGA
CCACTACGCTG---------------------------------------------------------------------
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-------------------CTTAACCAGGCATCGTTTCAGAGTTTGTACTACGAGATAC---CAGCACGATGCCGCCGCG
GCAC-GGAAAAAGTACGCGCGCGCG----GGCACTAACACGTCAACGGAGCCCTGGGCACCGTTGGTGCGGTTCGGCGCC
GCGACAAAGCTTCTCCAGCCACAGGAACGAGACGCCC----GCCATTGGAATCGTCCGCTCTTGATCTTCCACACGCCCA
GCTCCTTCACCGCCACGGTTCATTCGC--------------------------CCCGTCTATTCTTGGAACCTTCCCCGC
CTTCTAGTTGCTGCACATG-----TTCCATGTCATTCCTCTG----AGTATTTATACGGCCTCGTGGTTCGACAGGTCCT
CTGCAACAGTCAATACTTCAACTTCAACGCAACGCAGCACGGGCAACGTTGGTTGA--ACAAGGAGCTGACCGAGTCCAG
CAATGGCGGCGAGGGCTGCATGTACCGGCCGGCTGCTCAGAGCAACCACCGCCAAGGACAGCCGTCTGCCATCGTCGTCC
CCGGCGGCCAGCCGGCCGG---------------CGTGCCGCATCCCGTCTCTCAAGTTCCCGTTCCTGTGGGACACCAA
GGCGAGGCAAGGGAAGATCAGCCGCGCCGCCGAGCAGAGGGCGGCGCTGATCACCCTGGGAGCAGCCAGCGCCAGCACCA
CGGAGGAGAAACAACTCCTGCCGGGGGAAGCGAGCAGCGTAGATCTCCTGCTGCCTCTGGCGTACGAGGTCACCAGGAGG
CTGGTGCTCAGGCAGTTCGGGGAGACGTGGCTGGCCCTCACACGGCGTCGCTGGGCCAAGGTCGCCGAGGCCGTCGTCCA
CCAGGGCATCGTCAGATGCCAATCGTTCACGCTCATCGGCGTCGCAGGATCGCTCCTCGGTTCAGTCCCATGTTTTCTCG
AGGTAATTCCGACAAATGACCCTTTATGTCACTCACTTCTCAATCAAGTGTAACCATTTATGTGATGCAAATACTGTTCG
AAATCAGGACGTCCAAGACTGATCAAACTT---TTTTTTGTGACTGTATAGGGCTGTGGTATTGTTGTTGAGTCGTTCTT
CTTGCAGTTCCGAGCCATGTCCCAGACAGTAGATCCAGCCGAGATCATCAAACTGCTCATCGAAGCATTAGGTACATGTT
CTTCATCTGG----------------CGTTCGCTTCAACA-----TGAGCTTTGCGCAAACCATAGTACTCCATGTTACT
AACTTGGGGACAAACTAATTCCTCTTCTTCCAGACATGTTTCTGATCGGCACTGCTCTGCTCACGTTTGCCATGGGGATG
TACGGCATGTTCTACGGCTCGCAGCGCGTCCAGGAGCCCATCTACGAGAGGCTGAAGAAAGGGGCGAGGATCCGGTCCGT
CACGCAGGCCAAGTCGAGGTTCGGCCACGCCGTGATCCTGCTGCTCCAGGCCGGCGTCCTCGAGAAGTTCAAGAGCGTGC
CGCTCGTCACCGGCCTCGACATGACCTGCTTCGCCGGGGCCGTGCTCGCCTCCTCCGCCGGCGTCTTCCTGCTGTCCAGG
CTCTCGGCGCATCCGCAGTCATGCAACAAGCAAGCCTCCTTCGCGTGAACGTGTCCGATGTCACT------------GCA
AAACATGCAATATTCGTTTGTTCTTTCATTTCAAGTTAGCGAAGCAAGAAGTAGTACTTACTAATAGAAAAACCAAAACC
TGTGATGCTCTTGTGCCTTTTTCGTCTTTTCCCTCACTGCTCGTAGCGGTTTAATTTGTAGCTTGAGAGCAATGTCAATA
AAGATTCTCGGGGTAGGAAGAAAAGGTACTGCAAAAATCATTTCGGAGCGA----CTCTCGTACTCTTTTGTGATCAACC
ACGTAAAAACTCGTGGTGCGTTTCACCTTCACGTTGCCTCCCGAAATTTCAGTGGCCGCGTTCCGGCATCGACTGGGATG
GGCGGCCGAG--------TGCTTTCGATGGCGAAGGCGTGAGTGACGGTACCTGTGGCGCCGCGGCGTCGGCTCTTCCCT
ATTCCGACCGCGCGCGGATTCTGCTCCGCCACTCGCCGTCGCACTGCCGCTTAGGGGAGGGAAGAGGCAGTGTGGCGCGC
GCGACATCG-----------------------------------------------------------------------
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--------------------------------------------------------TAACATCGGCCAACCTAGCTACCC
ACGCGAAGACACACACTATTGAAAAGAAAGCATCGTCGAGGTTATAACCAACCAGTATTGTCATCACTCCTCTGCGAGCC
ATCAATTTCGATTTCAGCATTGACGACCACCAACGCAACCCTCATCAGACAGTCTACCACCTGCGCTGGCGATGAGACAC
CTGA---GACTTAGATGATGAACCTTGCATGAGAAAAGCGTTGAGCCAGCACCAACTAGGCCCTGCAAGCGAACATCGAT
CTCATGCCATCGTCACCGCTAACGCACCTCCTCCGCAACTCCGAT-CCACAAAGACGCGATGAGGCACGAGAACTCCTCG
AACACATCGGATGATACCGACTACCAAACCCCCACCTCAACTGGTGAGGACACCACAACCATCGACAAGTCCCCAACAAT
TATGGGTCCTATCACAAGAAGTCGCGCCAAACTAATAAGTGACCAGATGATCGCTAAGACGCTAACTGAAGTTTACCTTG
TAA
>chr5B_5
----TTTGGACGGACAAAGGCACCCGATGGACCGACGCCAAATGCAGCCCCCCACGCCGCGAGAGATGACAAATGTACGA
ACGAGCACACACTTGCCCGAAGAACTTCAAGCTTGAGACTTCAATGTCTCCACCCGTACCTCTCGGCGTGCCACCACGGC
GTGTGGCTCCATCCTCGTACCAGCAGGAGAGAAAACGAAGACGGCGAGCGTTTTGCGTCACGTGCCCGCGGACGAGGCCG
GAGCGCCAAGGAAGGAACGCGCTGCCGCCGCACACGCGTCCGTCCGCCCGGCGGCTCGCCCGTCCACCTCGTATCCCCTT
CCGCTGCCATCTCGTTCTCGTACCTGCCGAGCCGTGACACACGAGCCCACGCGCGCGCGCTTATGGCCGATCCTTCCTAA
CAGACGGCGA-----------------------------------AAAAATCCCTTGATCTTTCCGCGCTTCATCAAATT
ACCGAAGACCGGAGGAAAGTTTGCGCACGAAGTTGCAGGTTCAGGCG-ACCATTCCTCCTTCCTCC------CGTCGCTC
TCTCTAGCTACTCCGAC--------GAGCGGTAGGTACATACAGCGACTCTTCGTTCCTGTCGTTTCTCGCGCCAAATGA
CCACTATGCAGCTTAGAGCATCTCCAACAGTCGCGTCAAACTAGCGCCGCGTTGTAAAAGTGAGCGTTTTAGCGCGCGCG
CAACCGGTGTAGCTGCTCCAACGGGCGCGCAAAAACAGCGCGCCCCATATGCAGTTCAGCACGCTGGCCGAAACGCAATC
GCGCGCCGCTTATTTGCTGCGCACCCGCGCGCTGAACTCTCGCGCGCTTGCTCTCCCACTTCCAACCCTATCCGGCCGCG
CCGCCGCCGTCGCCCGCGCCCCCCGACGACCGTTCCGGCACTTCCCCCGCCTATCCCCGCGCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNGCCGGCCCTCACGCGCGCCCGTCGTCCGAGGAACAGCGCCCGAGCGCTCGCCCGCGCCGCGCCC
GCAAGGTGTTCGGCAAAACGCCTACAAGGTATGTATTGCTCAAACTTCATGAATTTGGTGCATGTTTTTAATTGTAATTT
TTATAGTATAGTATTGAACATTGTAGATGAGTTCGTCGTATGATGCTTCCGAAGAAGAATTTGATATGGAAGAGGAGGAG
GATCTTGCAATGATCCTAGCTATGCATATCAATAAAAAACCGAAGCACGGTGGTTCGGTTATAGGTCGGGAAAAAATTTG
GAGAGATAGGATTGATACCCATAACAGATTGATGAAAAATCTTGATTTTCACAATGCTCAGGCGGCGGGTAGAAAAGATG
TGGAGAGAGCATTTGGGATTTTGCAAGCCTAATTTGCTATTGTGAGAGGTCCGGCTAAATTTTGGGATCAAAAAATGCAT
TGGTACATCATGCACGCTTGTGTGACCATGCACAACATGATCATCGAGAATGAGCGTGGCCAAGATTTAGACTACTCACA
GTATGAGCTCTTAGGACATCCCGTGCGAGTGCGACGAAGGGCTGAAAGGGTAGCCCGTTTTGTTGCCTCCTATCATGCCA
TTCGGCGTCCCGCAACGCACAATGAACTTCAGAAGGATCTGATTGAAGAGTGGCATGGAATGGACAACAAAGAAGATGAT
TTCTGCATTCGACATTGTATTGTTCATGAATTATTTGTTGTATTTATTGTAGTATTTGTTGTACTGAACGATAAACTATT
TGTTTGGGTTGTAATGATAATGAAATTGAACTATTTATGTTGATTTATTTTGTTTGTTTGATCATTTTTGCTTTTCTTTG
ATATGTATATGTGGTTTGTGCGTGCCGCGCGCTGTATTTTTGCGCACTGCTGGAGCGGCGCGCGCGCTGCATTATAGCGC
GGCTGGTGGAGCCAGAGCTGACGGCCGCGCTAAACCAACCAAAGCGCGCGCGCCATACTAATTTTTAGCGCGGCGCGAAG
CGCGGCTGTTGAAGATGCTCTTAACGAGGCATCGTTTCAGAGTTT---CTACGAGATAC---CAGCACGATGCCGCCGCG
GCACCGGAAAAAGTACGCGCGCTCG----GGCACTAACACGTCAACGGAACCCTGGGCACCGTTGGTGCGGTTCCGCGCC
GCGACAAAGTTTCTCCAGCCACAGGAACGAGACGCCATTCGGCCATTGGAATCGTCCGCTCTT------CCACACGCCCA
G---CTTCACCGCCACGGTTCATTCAACTCCGGCCCTGCCCTGCCCTGCCCTGCCCGTCTATTCTTGGAACCTTCCCCGC
CTTCTAGTTGCTGCACAT-----ATTCCATGTCATTCCTCCCTCCCAGTATTTATACGGCCTCGTGGCTCCACAGGTCCT
CTGC-ACAGTCAATACTTCAACTTCAAAGCAACGCAGCACAGGCAACGTTGGTTGA--ACAAGGAGCTGACCGAGTCCAG
CAATGGCGACGAGGGCTGCAAGCACCGGCAGGCTGCTCAGAGCGACCACCGTCAAGGATAGCCGTATGCCGTCGTCGTC-
--------------GCCGG---------------CGTGCCGCATCCCCTCTCTCAAGTTCCCGTTCCTGTGGGACACCAA
GGCGAGGCATGGGAAGATCAGGCGCGCCGCCGAGCAGAAGGCGGCGCTGATCACCCTGGGAGCAGCCACCACCAGCACCA
CGGAGGAGAAGCAACGCCTGCCGGGGGAAGCGGGCAGCGTGGATCTCCTGCTGCCTCTGGCGTACGAGGTCACCCGGAGG
CTGGTGCTCAGGCAGTTCGGGGCGACGTGGCTGGCCCTCACGCAGCGTCGCTGGGCCAAGGTCGTCGAGGCCGTCGTCCA
CCAGGGCATCGTCAGATGCCAGTCGTTCACGCTCATCGGCGTCGCAGGATCCCTCCTCGGTTCAGTCCCATGCTTCCTCG
ACGTAATTAACTTAAGCTCTTCTTCC----------TCCTCCATTCACGCTGCAACCTTC---------------GTTGC
AAATCAAGTCACCAGAGACTGATCAAACTT---TTCATGCGTGTC-TGTAGGGTTGTGGCATTGTTCTGCAGTCCTTCTC
CTTGCAGTTCCGTGCCATGTCGCAGACGATAGATCACGCCGAGATCATCAAACTTCTCATCGAAGCATTAGGTACTTACT
GGTCTAAT--------CACAAGGCATCCTTCGCATCAATC-----CGAGTCTGTTGCTAACTGGAGTATTTTCTCTTCTT
GCA---------------------------CAGACATGTTTCTGATCGGCACCGCCCTGCTCACGTTCGGCATGGGGATG
TACGGCATGTTCTACGGCTCGCAGCGCGTCCAGGAGCCCATCTACGAGAGGCTGAAGAAAGGGACGAGGATCCGGTCCGT
CATGCAGGCCAAGTCGAGGTTCGGCCACGCCGTGATCCTGCTGCTCCAGGCCGGCGTCCTCGAGAAGTTCAAGAGCGTGC
CGCTCGTCACCGGCCTCGACATGGCCTGCTTCGCCGGCGCGGTGCTTGCCTCCTCCGCCGGCGTCTTCCTGCTGTCCAAG
CTCTCCGCGCATCCGCAGCCATGCAACAAGCAAACCTCCTTCGCGTGAACGTGTTCCATGTCACT------------GCA
AAACATGCAATATTCATTTGTTCTTTCATTTCAACTTAGCAAAGCAAGAAATAGTACTTACTAATAGAAAAACCAAAACC
TGTGAAGCTGGTGTGCCTTTTTCGTCTTTTCTCTCACTGCCGGTAGCGGTTTATTTTTATTTTTTTTATTTTTTTGG---
-------------------------------------------------------CTCTCCTGCTCTTCTGTGATCAACC
ACGTAAAAACTCGTGGTGTGTTTCATTTTCACGTTGCCTCACGAAATTCCAATGGCCGTGTTCCGGCATCGACTGGGATG
GGCGGCCGAGACGCCGAGTGCTTTCGATGGCGAAGGCGTGAGTGACGGTACCTGTGGCGCCACGGCGTCGGCTCTTCCCT
ATTCCGACCGCGCGCGGATTCTGCTCCGCCCCTCGCCGTCGCGCTGCCGCTTAGGAGAGGGAAGAGGCGCCAGGAGGTCG
GGCGTGCTGGTGAATTTTTACGGCCGTTTTTCAGTTCTCCACCGGGGCCGGGAGAATCTAGTAAAAATAAATAAAATTAA
ACCGAAGCAAAATATTTTTCTCGTCCCGTTAATTCATCTCATTAATTTAGAAGATGTAGAATTTTTCTTTGCCGCTAAGA
TGTAGAATTGTCTAGTTAATTAGCGAAAATCATCCGTTGCAACAGCCCATTTACGATAACAAGGGCCAACCAAGCTACCC
ATGCTG------------TTGAGAAGAAAGCATTGTCGAGGTTATCACCAACCAATATCATCATCACTCCTCCGCAAGCC
ATCAATTTCGATTTCAGCATTGACGACCACCAACGAAACCCTCATCAAACAGTTGACCACATGCGCTGGCCATCAGACAC
CTGACTTGACTCAGATGATGAACCTTGCATGAGAAAAGTGTTGAGCCCGCACCAACAA-GCCCTGCAAGCGAACACTGAT
CTCGTGCCATCGTCACTCCTAACGCACCTCCTCCGCAGCTCCGATTCCACAAAGACGTGATGAGGCATGAGAACTCCCTG
AACACATCTGATGATACCGACTACCAAACCCCCGCCTCAACTGATGAGGACACCACAACCATCGACAAGTCTCCAATAAT
TATGGGTCCAATTATAAGAAGTCGCGTCAAACTAATAAGTGACCAGGTGATCGCTAA-----------------------
---
>chr5D_13
------------GACAAAAGCACCAGGTGCACCGACCCCGAATGCAGCCCCCGCGCCCGCGAGA-ATGACAAATGTACGA
ACGACCACACACTTGCCCGAAAAGCTTCAAGCTTGAGACTTGAGAGTCTGCACCCGTACCTTTCGGCTTGCCACCACGGA
GTGTGGCTCCGTCCTCGTACCAGCAGGAGAGAAAACGAAGACGGCGAGCGTTTTGCATCACGTGCCCGCGGACGAGGCCG
GAGCGGCAAGGAA----CGCGCTGCCGCCGCACACGCGTCCGTCCGCCCGGCGGCTCGCCCGTCCACCTCGTATCGCCTT
CCGCTGCCATCTCGCTCTCGTACCTGCCG-----TGACACACGAGCCCACGCGCGCGTCC----GGCCCACCTTTCCTAA
CAGACGGCCAGGTTTAGACGGGCGCGCCAGCGTTCGCGCCCGGCGAAAAATCCCTGGATCTTTCT---------------
------GGCCGGAAGGAAGTTTGCGCACCAAGTTGCAGCTTCAGGCAAACCTTTCCTCCTTCCTCCACGCGACATCGCTC
TCTCGTGCTGCAGCTGCTGCTACGAGAGCGGTAGGTGCGCACAACGACTCTTCGTTCCTGTCGTTTCTCGCGCCAAATGA
CCA-----------------------------------------------------------------------------
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--------------------------------------------T---CTACGAGATACCAGCAGCACGATGCCGCCGCG
GCAC-GGAAAAAGTACGCGCGCGCGCGCGGGCGCTAACACGTCAACGGAACCCTGGGCACCGTTGGTGCGGTTCGGCGCC
GCGACAAAGCTTCTCCAGCCACAGGAACGAGACGCCC----GCCATTGGAATCGTCCGCTCCTGATCTTCCACACGCCCA
GCTCCTTCACCGCCACGGTTCATTCGC--------------------------CCCGTCTATTCTTGGAACCTTCCCCGC
CTTCTAGTTGCTGCACATGTTCCATTCCATGTCATTCCTCCCTCCCAGTATTTATACGGCCTCGTGGTTCGAAAGGTCCT
CTGC-ACAGTCAATACTTCAGCTTCAACGCAGCGCAGCACAGGCAACGTTGGTTGAACACAAGGAGCTGACCGAGTCCAG
CAATGGCGGCCAGGGCTGCAGGTACCGGCAGGCTACTCAGAGCGGCCACCGCCAAGGACAGCCGTCTGCCGTCGTCGTC-
--------------TCCGGCGGCCAGCCGGCCGTCGTGCCGCATCCCGTCTCTCAAGTTCCCGTTCCTGTGGGGCACCAA
GGCGGCGAGGCGCGGGATCGGCCGCGCCGCCGAGCAGAGGGCGGCGCTGATAACCCTGGGAGCGACCACCGCCAGCACGA
CGGAGGAGAAGCAACGCCTGCCGGGGGAAGCGGGCAGCGTGGATCTCCTGCTGCCTCTAGCGTACGAGGTCACCCGGAGG
CTGGTGCTCCGGCAGTTCGGGGCGACGTGGCTGGCCCTTACGCGGCGTCGCTGGGCCAAGGTCGTCGAGGCCGTCATCCA
CCAGGGCATCGTCAGATGCCAGTCGTTCACGCTCATCGGCGTCGCAGGATCGCTCCTCGGTTCAGTCCCATGTTTCCTCG
AGGTAACCAAC-TAAGCGCTTCTTCA----------TCCTCCTATATGTGTGGCCATATATGC--------------TGC
AAGTCAAGTCTTCAAAGACTGATCAAACCTTTCTTCATGCGTGTC-TGTAGGGTTGTGGCATTGTTCTGCAGTCGTTCTC
CTTGCAGTTCCGTGCCATGTCGCAGACGATAGATCACGCCGAGATCATCAAGCTGCTCATCGAAGCATTAGGTACGTACC
CGTACTTTTAATCACACACAAGGCACCCTGCGCCATCAATCTGATCGAGTCTGTTAGTAACTATTTTCTGTCCTCGTT--
------------------------------CAGACATGTTCCTGATCGGCACCGCCCTGCTCACGTTCGGCATGGGGATG
TACGGCATGTTCTACGGCTCCCAGCGCGTCCAGGAGCCCATCTACGAGAGGCTGAAGAAAGGGGCGAGGATCCGGTCCGT
CACGCAGGCCAAGTCGAGGTTCGGCCACGCCGTCATCCTGCTGCTCCAGGCAGGCGTCCTCGAGAAGTTCAAGAGCGTGC
CGCTCGTCACCGGCCTCGACATGGCCTGCTTCGCCGGGGCGGTGCTCGCCTCCTCCGCCGGCCTCTTCCTGCTGTCCAAG
CTCTCGGCCCATCCGCAGACACGCAACAAGCAAGCCTCCTTCGCGTGAACGTGTCCAATGTCCCTGCTGCATAAGCAGCA
TAACATGCATTATTCATTTGTTCTTTCATTACAAGTTAGCAAAGCAAGACATAGTACTTATTAATAGAAAAGCGAAAACC
TATGAAGCTCTTGTGCCTTTTCC-TCTTTTCTCTCACTGCCCGTAGCGGTTTAATTTGTAGCTTGAGAGCAATGTCAATA
AAG------------------------------------ATTTCGGAGCGACTCTCTCTCGTGCTCCTTTGTCATCAGCC
ACGTAAAAACTCGTGGTGTGTTTCACTTTCACGTTGCCTCAGGAAATTCCAGTGGCCGCGTTCCGGCATCGACTGGGATG
GGCGGCCGAG--------TGATTTCGATGGCAAAGGCGTGAGTGACGGTACCTGTGGCGCCGCGGCGTCGGCTCTTCCTT
ATT-CGACCGTTCGCGGATTCTGCTCCGCCCCTCGCTGTCGCGCTGCCGCTTACAAGAGGGAAGAGGCGGTGTGGCGCG-
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---
>SNPs
SSSS-----------------S---------S------------------------------------------------
-----------------S------------------S-------------SS----------------------------
--------------------------------------------------S-----------------------------
----------------------S---------------------------------------------------------
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------------------------S----------S------------S---SS-SSSS-SSSS----------------
--------------------------------------------S-----------------------------------
---------------------------------------------------------------------------S----
------S--S----------------------------------------------------------------------
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-------------------------S-------------------SSS--------------------------------
-------------------------------------------------S------------------------------
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----------------------------------------SS--------------------------------------
----S-----------------------------------S---------------------------------------
--------------------S--------S-------------S--------------------------S--------S
SSSSSSSSSSSSSS------------------------------------------------------------------
---------S----------------------------------------------------------S-----------
----------S----S----------------S-------S---------------------------------S-----
----------------------S------------------S----------------------S---------------
---------------------S-----------------------------------------------------S----
--------SSSSS--SS-SSS---S-SSSSSSSSSS-S---S--S------SS---------SSSSSSSSSSSSS---SS
------S-S-S--S---------------------SS-SSSSSSSS-S-----S-----S------S-SS---------S
------------S--------S-----SS------SS--------------------------------------S-SS-
-S--S-S-SS-----------------S-----S----SS-----S---SS-SSS--S---S------S-S-S-S--SS-
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------S--S-----------S-S----------
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-----------------------S----------------S-------------------------------------S-
------------------S-------------------------------------S-----------------------
---------------S------------------------S---------S-----------------------------
-----S-------------------------S--------S---------------------------------------
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------S-----------------
------------------S-------S-------------S-------S-------------------------------
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------------------------------S-----------S------------S------------S----------S
-SSSSSSS------------------------------------------------------------------------
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-------------------------------------------------------------SS--------S--------
-S--SSSSSSSSSSSSSS----S----------S-----------S--------S---SS------------S--S----
-----------------------------------S-----------S-----SS-----S---------S--S------
-----------S--------------------------S--------S--------S-S----------------SS---
---S------------SS-------------------S-------------------S---------S---------SS-
--------S------------------------S---------S---------------------------S----S---
---------S--S-S-----------S-------------------S----------SSSSSSSSSSSSSSSSSSSSSSS
SSS
>forward_647
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-------------------------------------------------------------------TCGCGCCATATGA
CCACTAC-------------------------------------------------------------------------
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>reverse_3679
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------------------------------------------------------------------------------TT
CTTCATCTGGCGTTCGCT--------------------------------------------------------------
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>forward_650
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----------------------------------------------------------------------CGCCATATGA
CCACTACGCT----------------------------------------------------------------------
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>reverse_4358
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-------------------------------------TCATTTCGGAGCGACTCTCG-----------------------
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