>input_sequence_59958
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-------------------------------------------------------------------------------C
GCGGCCGCCGTCGGAGCTGCTGACCGGCCCGCGGCTCGATTCGTCCGGGGGATTTGTTGCGGGGGCTCTCGCTTGCTCCC
GATGGCGTCGTCCCCGGTCTCCTACTGGTGCTACCACTGCAGCCGCTTCGTGCGGGTCTCCCCGGCCACCGTCGTCTGCC
CCGACTGCGACGGCGGCTTCCTCGAGCAGTTCCCGCAGCCTCCGCCGCCGCGCGGCGGCGGCGGCAGCGGCCGGCGCGGG
GCCATGAACCCGGTGATCGTGCTGCGGGGCGGCTCGCTCTCCGGCTTCGAGCTCTACTACGAGGACGGCTCCGGCGACGG
GCTGCGGCCGCTGCCCGGCGACGTCTCGCACCTCCTCATGGGGTCGGGGTTCCACCGCCTGCTCGACCAGTTCTCGAGGC
TGGAGGCTGCCGCGCCGCGCCCGCCGGCGTCCAAGGCCGCGGTGGAGTCGATGCCGTCCGTGACGGTCGCCGGGGGAGGC
GGGGCCCACTGCGCGGTGTGCCAGGAGGCCTTCGAGCCCGGCGCCGCGGCTCGGGAGATGCCGTGCAAGCACGTCTACCA
CCAGGACTGCATCCTCCCCTGGCTCTCCCTCCGCAACTCCTGCCCCATCTGCCGCAGCGAGCTTCCGGCGGCAGCCGTGC
CTGAGGCGGAGGCGGATGCCGGGCTCACCATCTGGCGACTCCCCCGCGGCGGATTCGCCGTTGGAAGGTTCGCCGGCGGG
CCCAGAGAGCAACTGCCGGTTGTCTACACGGAGCTGGATGGTGGTTTCAGCAACGGCGTCGGGCCGAGGCGGGTGACATG
GCCAGAAGGAGAAGGGCAGGTGGACGGCGGCGAAGGTCGGATTCGCCGTGTATTTAGGAACCTGTTTGGGTGCTTTGGCC
GGGGCGGCCGGCCTGAGAGTTCCTCGCAGTCCCGTAGTGGCTGAGCAATGTTCTTCCTGGTAACTCACTTTCAATTGATG
ATAGTGGTGAATAAGTAGGAGT-TAGTAT---------------------------------------------------
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---------------------------------------------------------------AAGGAGGAAACCCCAGG
TGGTGAGTTATTGGTTAGTTTGATGTAAATGAAGGGCTTGCATT-CCCCACC-TTTTGTCTCGTTTTAAGAATTCAGAGT
TGGCCATGAGCAAACTACTCAGAAATGAAATTTGATAGCAAAT-------------------------------------
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>chr4D_1_TraesCS4D01G209500
TGCTGCCAAACCTACGAAGATGTGGCTGGATTGCTCGATGATCGGACAAAAATAACGTGTGGGCACGTCAACGGT-----
-----------------------AGAGTAGTATACACCGGGCGGCAAGCCTGTCAAGCAATTCCA-AAAAAACAAACGAT
GGAGTAGTACGTC-ATCGTGTAGCGGTATTTATAGAAGGAAAAGAAAAAGGCCTTGAAGAGCGGCTAAATGGCTCCCG--
--------------------------------------------------------------------------------
------------------------------------------------------------------ATAATTAAAAAAAC
TAGGTTTC---TTTCTTTACACGAGAGATGTTTGAGTGTGTAATGACTGTGTCAATTTTTAGCGTGTTTGCACATCCGAG
TAGCTCTAAGAA----ATAGGGTA-TGTGAAAAA--------------------------GTTTACTAGTTCATGCACTA
ATCGGATCTATTTTACTTCTTTTGCTCAGAGCTATCCAGATGTCCGAGCACCCTGAAAATTGATACGGACCTCACGCACC
CAAACATCTTCCATTCAAGTCT-------------TTTTAGTGTTTCTATTATTTTTACTGCTCACCAAGATCAGATAAG
TTCGCGTCCATAAATGGATATTCGAGGACCTTGCTGCTTTTCACTTCGAATAATCAGAAGGGATCCCCAACCGCAAAAAA
TAAAATGAAAAATCAGAAGGGATCCCGCAGAAAAGAAAAGAAAA-----TACAGAATAGAATTGCCTCTCCAGCGGCGGA
GCCGATCCGGGCGGCGGGCAGCGCCGAACCATCGATCCCGCA--TCTCCCTTGCTCGAG-------------------GC
TGACCGGTCAACGTAACGCAGCCGCTTAACTAACGCCGTGACACCACGCACTGGCGTCTCGCGGCAGCCCGCGTGGCGTC
GCCGTCACCAGCGACGTCACCACCGCGAGCGAGTGCGCCGTCCCGTCCCGTTCCACATAAAAACGAAACCACCCACTCAC
CCACCACGCAAT-----TCCCCTCCCCTCTCCAGGTCTCCTCCC------------GAAACCCCCAATTCGAAAATCGAT
TTGGGGATTTCGGCGTCCC-----------AGATCCGCTCCTCCGGCCGGTTCGCTCGGCCGCACGTCCGATCCGCGTTC
GCGGCCGCCGTCGGAGCTGCTGACCGGCCCGCGGCTCGATTCGTCCGGGGGATTTGTTGCGGGGGCTCTCGCTTGCTCCC
GATGGCGTCGTCCCCGGTCTCCTACTGGTGCTACCACTGCAGCCGCTTCGTGCGGGTCTCCCCGGCCACCGTCGTCTGCC
CCGACTGCGACGGCGGCTTCCTCGAGCAGTTCCCGCAGCCTCCGCCGCCGCGCGGCGGCGGCGGCAGCGGCCGGCGCGGG
GCCATGAACCCGGTGATCGTGCTGCGGGGCGGCTCGCTCTCCGGCTTCGAGCTCTACTACGAGGACGGCTCCGGCGACGG
GCTGCGGCCGCTGCCCGGCGACGTCTCGCACCTCCTCATGGGGTCGGGGTTCCACCGCCTGCTCGACCAGTTCTCGAGGC
TGGAGGCTGCCGCGCCGCGCCCGCCGGCGTCCAAGGCCGCGGTGGAGTCGATGCCGTCCGTGACGGTCGCCGGGGGAGGC
GGGGCCCACTGCGCGGTGTGCCAGGAGGCCTTCGAGCCCGGCGCCGCGGCTCGGGAGATGCCGTGCAAGCACGTCTACCA
CCAGGACTGCATCCTCCCCTGGCTCTCCCTCCGCAACTCCTGCCCCATCTGCCGCAGCGAGCTTCCGGCGGCAGCCGTGC
CTGAGGCGGAGGCGGATGCCGGGCTCACCATCTGGCGACTCCCCCGCGGCGGATTCGCCGTTGGAAGGTTCGCCGGCGGG
CCCAGAGAGCAACTGCCGGTTGTCTACACGGAGCTGGATGGTGGTTTCAGCAACGGCGTCGGGCCGAGGCGGGTGACATG
GCCAGAAGGAGAAGGGCAGGTGGACGGCGGCGAAGGTCGGATTCGCCGTGTATTTAGGAACCTGTTTGGGTGCTTTGGCC
GGGGCGGCCGGCCTGAGAGTTCCTCGCAGTCCCGTAGTGGCTGAGCAATGTTCTTCCTGGTAACTCACTTTCAATTGATG
ATAGTGGTGAATAAGTAGGAGT-TAGTAT---------------------------------------------------
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---------------------------------------------------------------AAGGAGGAAACCCCAGG
TGGTGAGTTATTGGTTAGTTTGATGTAAATGAAGGGCTTGCATT-CCCCACC-TTTTGTCTCGTTTTAAGAATTCAGAGT
TGGCCATGAGCAAACTACTCAGAAATGAAATTTGATAGCAAATCAGGAAGAACAAGCCCAAGCCTTTAAGAATGGGAGAG
CAGTGAATTATGGGGGAAATCAGTCACTGGCAATATTCTAGGCAAAGAGAACAATTGGTGTTCTCACTTCTGTATTGTTT
GTGCATATACTGGATTCGTTAAGATAAATTTCGATTTTGCATTATGTTGGTCCCATACATGAAATTTCAATATACTTGGG
TACTTCTATTTTTATTGT-ATTATTCCTCTGGCTAAACCTCTTTCTT-GTTTCAACATAAGATATCCTTAGTTCTGTCAT
AAGTTGTAACAACCGCCGTCGATTTACTTGTAGTTGGTTGAATCTAGGGCTGCTAA------------------------
--GTGATGTTTTGATTTATTTATTTTTTGGATGTG---CTTCTAC-ATGCTGGACTCTATAATGTTTTCATTTGCACTGC
TAAATAGACAAACAAAAGAAGTCCATTACAGGGTTTTGAAGCTCAACCGATTCAAGTATTATGTCTGTAACATTGGGATA
CCGATCTAGATTGATTTCTTCCGTGAATTGAACTAGTGTGAGGGGTCATATGAGTGTAGTGATCAATGAAGAAATGTCTA
CCGTATTAGTACGATGATATTCTGTCCTTATATTTCTATCACAGCAATTAGCAGTTTGTGGTATGTATAAGAGATGTTGA
AGTGGAGTTTTTTGGAGTGCAAATCCAAATGGAGTTCTCTGTTCCTTTCTTCGTATATGTATAAAGTTGCTGGGAATACC
ATGTTATTGTTTTCCAAGTTCATGTTGGGCTGGATTCCGAACAATGTTAGTCATCTTGCAGTAGGCATGACACTCGTTGT
CTGTATGTTCATCATTGTAGTTCGTTTCTCTTGTTTGATAGTCATACAAGTTAGCGCATAGTGGTTGGCCTAATTTTGAT
GTTCTACTTCTCATTTCTTCTGTACATTT-----GTATAAAATAGTGGCAGGATGATCTTCAGCAGAACCAATGGAATTG
CTATCTATTTCTCTTTTGAAACTCACCCATAGTGAGTTCC
>chr4B_1
TGCTGCCAAACCTACGAAGATGTGGCTGGATTGCTCGATGATCGGACAGAAATAACGTGTGGGCACGTCAACAATAGAGT
AGGCACCGCAAAAAGAAAAATCGAGAGTAGTATACACCAGGCGGCAAGCCCGTCAAGCAATTC-A-AAGGAAAAAACGAT
AGAGTAGTATTTATAA-------------------AAGAAAAAGAAAAGGACCTTGGAGAGCAGCTAAATGGCTTCCTTG
TCTGTGAATAGTAAATAATAAAAGAAAAAGGAAAGGACCTTGGAGAGCAGCTAAATGGCTTCCTTGTCTGTGAACAATAA
ATAATAAAAGAAAAATGAAAGGACCTCGGAGAGCAGCTAAATGGCTTCCTTGTCTGTGAACAGTAAATAATAAAAAAAAA
A------CTGATTTTTTTACATAAGAGATGTTTGAGTGTGTGATGACTG--TCAATTTTTAGCGTGATTGTACATCAGAG
TAGCTCTCAGAAAGTAATAGGGTT-TGTGAAAAAGTTTACTAGTTCCCGCAAAAAAAGAAGTTTACTAGTTCCTGCATGG
ATT-----GAATTTTT---TTTTTCTGAGAGCTACTCAGATGTCCGAGCACACTAAAAATGGGTATGGACCTCACGCACC
TAAACACCTTCCATTCAAGCATAATTTTGAC-TTGTTTTAGTGTTTC----------------------------TGAGT
TTGGGTCTGG-AAATGGATATTCGAGGACCTTGCTGCTTTTCACTTCAA-------------------------------
-------AATAATCAGAAGGAATCCCGCAGAAAAGAAAAGAAACGAAAGTACATAGTAGAATCGCCTCTCCAGCGGCGGA
GCCGATCCGGGCGGCGGGCAGCGCCGAACCATCCATCCCGCCCCTCTGCCTTGGCTGAGGCTTTGACTCCCTG-CCAAGC
TGACCGGTCAACGTAACGCAGCCGCTTAACTAACGCCGTGACACCACGCACTGGCGTGTCGCGGCAGCCCGCGTGGCGTC
GCCGTCACCAGCGACGTCACCGCCGCGAGCGAGTGCGCTGCG-----CCGTCCCACATAAAAACGAAACCACCCACTCAC
CCACCACGCAATTCCCCTCCCCTCCCCTCTCCAGGTCTCCTCCCCACTGCCTGCCCGAAACCCCCAATTCGAAAATCGAT
T-GGGGATTTCGGCGTCCCGAGCTCCCCCCAGATCCGCGCCTCCGGCTGGTTCGCTCCGCCGCCCGTCCGATCCGCGTCT
GCGGCCGCCGTCGGA---GCTGACCGGCCCGCGGCTCGATTCGTCCGGGGGATTTGTCGA-GGGGCTCTCGCTCGCTCCC
GATGGCGTCGTCCCCGGTCTCCTACTGGTGCTACCACTGCAGCCGCTTCGTGCGGGTCTCCCCGGCCACCGTCGTCTGCC
CCGACTGCGACGGCGGCTTCCTCGAGCAGTTCCCGCAGCCTCCGCCGCCGCGCGGCGGCGGCGGCAGCGGCCGGCGCGGG
GCGATGAACCCGGTGATCGTGCTGCGGGGCGGCTCGCTCTCCGGCTTCGAGCTCTACTACGAGGACGGCTCCGGCGACGG
GCTGCGGCCGCTGCCCGGCGACGTCTCGCACCTCCTCATGGGGTCGGGCTTCCACCGCCTGCTCGACCAGTTCTCGCGGC
TGGAGGCGGCCGCGCCGCGCCCGCCGGCCTCCAAGGCCGCGGTCGAGTCGATGCCGTCCGTCACGGTCGCCGGGGGAGGT
GGGGCCCACTGCGCGGTGTGCCAGGAGGCCTTCGAGCCCGGCGCCGCTGCTCGGGAGATGCCGTGCAAGCACGTCTACCA
CCAGGACTGCATCCTCCCATGGCTCTCCCTCCGCAACTCCTGCCCCATCTGCCGCAGCGAGCTTCCGGCGGCAGCCGTGC
CTGAGGCGGAGGCGGATGCCGGGCTCACCATCTGGCGACTCCCCCGCGGCGGATTTGCGGTTGGAAGGTTCGCCGGCGGG
CCCAGAGAGCAACTGCCGGTTGTCTACACGGAGCTGGATGGTGGTTTCAGCAACGGCGTCGGGCCGAGGCGGGTGACATG
GCCAGAAGGAGAAGGACAGGTGGACGGCGGTGAAGGTCGGATTCGCCGTGTATTTAGGAACCTGTTTGGGTGCTTTGGCC
GGGGCGGCCGGCCTGAGAGTTCCTCGCAGTCCCGTAGTGGCTGAGCAATGTTCTTCCTGGTAACTCACTTTCAATTGATG
ATAGTGGTGAATAAGTAGGAGT-TAGTAT---------------------------------------------------
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---------------------------------------------------------------AAGGAGGAAACCCCAGG
TGATGAGTTATTGGTTAGTTTGATGTAAATGAAGGGCTTGCATT-TCCCCCC-TTTTGTCTCGTTTTAAGAATTTAGAGT
TGGCCATGAGCAAACTATTCAGAAATGAAATTTGATAGCAAATCAGGAAGAACAAGCCCAAGCCTTCAAGAATGGGATAG
CAGTGAATTATGGGGGAAATCAGTCACTGGCAATATTCTAGGCAAAAAGAACAATTGGTGTTCTCACTTCTGTATTGTTT
GTGCATATACTGGATTCGTTAAGATAAATTTCGATTTTGCATTATGTTGGTCCCATACATGAAATTTCAATATACTTGAG
TACTTCTGTTTTTGTTGT-ATTATTCCTCTGGCTAAACCTCTTTTTT-GTTTCAACATAAGATATCCTTAGTTCTGTTAT
AAGTTGTAACAACGGCCGTTGATTTACTCGTAGTTGGTTAAATCTAGGGCTGCTAAATAGGGATAGCTTGCACACAATAT
AAGTGATGTTTTGAATTTCTTATTTTTTTTGGATGTGCCTTCTAC-ATGCTGGACTCT-TAATGTTTTCATTTGCACTGC
TAAATAGAGAAACTAAAGAAGTCCATTACAGGGTTTTGATGCTCAACCGATTCAAGTGTTATGTCTGTAACATTGGGATA
CCGATCTAGATTGATTTCTTCCGTGAATTGAACTAGTGTGGGGGTCCATATGAATGAAGTGATTACTGAAGAAATGTCTA
CCATATTCGTAAGATGATATTCTGTCATTATATTTCTATCACAGCAATTAGCAGTTTGTGGCATGTATAAGAGATGTTGA
AGTGGAGTTTTTTGGACCGCAAATCCAAATGGAGTTCTCTGTTCCTTTCTTCATATATGTATAAAGTTGCTGGGAATGCC
ATGTTATTCTTTTCCAAGTTCATGTTGGGCTGAATTCTGAACAATGTTAGTTATCTTGCAGTAGGCATGACACTCTTTGT
C--TATTTTCATCATTGTAGTTCATTTCTCTTGTTTGATGGTCATACAAGTTAGTGCATAGTGGTTGGCCTAATTTGGAT
GTTCTACTTCTCATTTCTTCTGTAGATTTATTCTGTATAAAATAGTGGCAGGATGATCTTCAGCAGAACCAATGGAATTG
CTATCTATTTCTCTTTTGAAACTCACCCATAGTGAGTTC-
>chr4A_1
TGCTGCCAAACCTACGAAGATGTGGCTGGATTGGTCGATGATCGGACAAAAATAACGTGTGTGCACGTCAGCGAA-----
-----------------------AGAGTAGTATACGTA-----------CCGTCAAGGAATCCCACAAAAAACAAACGAT
AGAGTAGTATACGTACCGTGTGGCAGTATATTTATAA-------------------------------------------
-------------------AAAGAAAAAAAGAAAAGAACTTGGAGAG---------------------------------
-------------------------------------------------------GTGAATAGTAAAATAATAATAATAA
TTATAACCTGATTTTTTTATATGAGAAATGTTTGAGTGTGTGATGACTGTGCCAATTTTTAGCGTGTTTGCACATTTGAA
TAGCTCTCAGAAAAGAATTAAGACCTGTGAAATT--------------------------TTTTACTAGTTCGTGCACTG
ATTAGGTTGAGTTTTT---TTTTTCTAAGAGCTGCTTAGATGTCCGAGCACGTTGGAAATCGCTACGGACCTCACGCACC
CAAACATCTTCCATTCGAAAATAATTTAGATTTTGTTTTAGTGTTTCCATTATTTTGTTAGTGTTCGTCGAGATATGAGT
TTGGGTCCGG-AAATGGATATTCGAGGACCTCGCTGCTTTTCACTTCGA-------------------------------
-------AATAATCAGAAGGGATCCCTCAGAAAAGAAAAGAAAAGAAAGTACAGAACAGAATC-----------------
GCCGATCCGGGCGGCGGGCAGCGCCGAACCATCCATCCCGCCTCTCTCCCTTGGCTGAGGCTTTGACTCCCTGGCCCAGC
TGACCGGTCAACG--------------------------------------TGGCGTGTCGCGGCAGCCCGCGTGGCGTC
GCCGTCACCAGCGACGTCACCGCCGCGAGCGAGTGCGCCGTCCCGTCCCGTCCCACATAAAAACGAAACCACCCACTCAC
CCACCACCCAAT-----TCCCCTCCCCTCTCCAGGTCTCCTCCC------------GAAACCCCCAATTCGAAAATCGAT
T-GGGGATTTCGGCGTCCCAAGCTCCCCCCAGATCCGCGCCTCCGGCCGGTTCGCTCGGCCGCCCCGTCGA------TCT
GCGGCCGCCGTCGGA---GCTGACCGGTCCACGGCTCGATTCGCCCGGGGGATTTGTTTC-GGGGCTTTTGGTCCT----
GATGGCGTCGTCCCCGGTCTCCTACTGGTGCTACCACTGCAGCCGCTTCGTGCGGGTCTCCCCGGCCACCGTCGTCTGCC
CCGACTGCGACGGCGGCTTCCTCGAGCAGTTCCCGCACCCGCCGCCGCCGCGCGGCGGCGGCGGCAGCGGCCGGCGCGGG
GCCATGAACCCCGTGATCGTGCTGCGGGGCGGCTCGCTCTCCGGCTTTGAGCTCTACTACGAGGACGGCTCCGGCGACGG
GCTGCGGCCGCTGCCCGGCGACGTCTCGCACCTCCTCATGGGGTCCGGCTTCCACCGCCTGCTCGACCAGTTCTCGCGGC
TGGAGGCGGCCGCGCCGCGCCCGCCGGCCTCCAAGGCCGCGGTCGAGTCGATGCCTTCCGTGACCGTCGCCGGGGGAGGC
GGGGCCCACTGCGCGGTGTGCCAGGAGGCCTTCGAGCCCGGCGCCGCGGCCCGGGAGATGCCGTGCAAGCACGTCTACCA
CCAGGACTGCATCCTCCCCTGGCTCTCCCTCCGCAACTCCTGCCCCATCTGCCGCAGCGAGCTTCCGGCGGCGGCCGTGC
CTGAGGCGGAGGCGGACGCCGGGCTCACCATCTGGCGACTCCCCCGCGGCGGATTTGCCGTCGGAAGGTTCGCCGGCGGG
CCCAGAGAGCAACTGCCGGTTGTCTACACGGAGCTGGATGGTGGTTTCAGCAACGGCGTCGGGCCGAGGCGGGTGACATG
GCCAGAAGGAGAAGGGCAGGTGGACGGCGGCGAAGGTCGGATTCGCCGTGTATTTAGGAACCTGTTTGGGTGCTTTGGCC
GGGGCGGCCGGCCCGAGAGTTCCTCGCAGTCCCGTAGTGGCTGAGCAATGTTCTTCCTGGTAACTCACTTTCAATTGATG
ATAGTGGTGAATAAGTAGGAGTTTAGTAT---------------------------------------------------
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---------------------------------------------------------------AAGGAGGAAACCCCAGG
TGGTGAGTTATTGGTTAGTTTGATGTAAATGAAGGGCTTGCATT-CCCCCCCTTTTTGTCTCGTTTTAAGAATTTAGAGT
TGGCCATGAGCAAACTACTCAGAAATGAAATTTGATAGCAAATCAGGAAGAACAAGCCCAAGCCTTCAAGAACGGGATAG
CAGTGAATTATGCGGGAAATCAGTCACTGGCAATATTCTAGGCAAAGAGAACAATCGGCGTTCTCACTTCTGTATTGTTT
GTGCATATACTGGATTCGTTAAGATAAATTTTGATTTTGCATTATGTTGGTCCCATACATGAAATTTCAATATACTTGAG
TACTTCTATTTTTATTGTTATTATTCCTCTGCCTAAACCTCTTTTTT-GTTTCAACATAAGATATCCTTAGACCGGTCAT
AAGTTGTAACAACGGCTATCGATTTACTTGCAGTTTGCCGAATCTTGGGCTGCTAAACAGGGATGGCCTGAACAGCATAC
AAGTGATGTTTGATTT------TTTTTTTTGGATGTGCCTTCTACCATGCTGGACTCT-TAATGTTTTTATTTGCACTGC
TAAATAGAGAAACAAAAGAAGTCCATTACAGGGTTTTGATGCTCAACCGATTCAAGTGTTATGTATGTAACATTGAGATA
CCGATCTAGATTGATTTCTTCCGTGAATTGAACTAGTGTGAGGGGCCATATGAGTGAAGTGATTAACGAAGAAATGTCTA
CCGTACTAGTAAGATGATATTCTGTCATTATATTTCTATCACAGCAATTAGCAGTTTGTGGCATGTATAAGAGATGTTGA
AGTGGAGTTTTTTGGACCGCAAATCCAAATGGAGTTCTCTGTTCCTT----CATATATGTATAAAGTTGCTAGGAGTACC
ATGTTATTGTTTTCCAAGTTCATGTTGGGCTGGATTCCGAACAATGTTAGTTATCTTGCAGTAGGCATGACACTCTTTGT
C--TATGTTCATCATTGTAGTTCATTTCTTTTGTTTGACAGTCATACAAGTTAGCGCATAGTGGTTGGCCTAATTTTGAT
GTTCTACTTCTCATTTCTTCTGTACATTTATTCTGTATAAAATAGTGGCAGGATGATCTTCAGCAGAACCAATGGAATTG
CTATCTATTTCTCTTTTGAAACTCACCCATAGTGAGT---
>chr3B_1817
GCA-----------------------------------------------------------------------------
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-------------------GTGGACGCCGGTGAAGGTCGGATTCGCCCTGTATTTAGGAACTTGTTTGGGTGCTTTGGCC
GGGGCGGCCGGCCTGAGAGTTCCTCGTAGTCCCATAGTGGCTGAGCAATGTTCTTACTGGTAACTCATTTTCAATTGATG
ATAGTGGTCAATAAGTAGGAGT-TAGTAT---------------------------------------------------
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---------------------------------------------------------------AAGGAGGAAACCCCAGG
TGATGAGTTCTTGGTTAGTTTGATGTAAATGAAGGGCTTACATT-CCCCCC--TTTTGTCTCGTTTTAAGAATTTAGAGT
TGGCCATGAGCAAACTACTCAGAAATGAAATTTGATAGCAAATCAGGAAGAACAAGCCCAATCCTTCAAGAATGGGATAG
CAGTAAATTATTGGGGAAATCAGTCACTGGCAATATTCTAGGCAAAGAGAACAATTG--GTTCTCACTTCTGTATTGTTT
GTGCATATACTGGATTCGTTAAGATAAATTTCGATTTTGCATTATGTTGGTCCCATACATGAAATTTCAATATACTTGAG
TACTTCTGTTTTTGTTGT-ATTATTCCCCTGGCTAAACCTCTTTTTT-GTTTCAACATAAGATATCCTTAATTCTGTTTT
AAGTTGTAACAATGGCCGTCGATTTACTTGTAGTTGGTTAAATCTAGGGCTGCTAA------------------------
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>chr3B_1817
GCA-----------------------------------------------------------------------------
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-------------------GTGGACGATGGTGAAGGTCGGATTCGCCATGTATTTAGGAACCTGTTTGGGTGCTTTGGCC
GGGGCGGCCGGCCTGAGAGTTCCTTGCAGTCCCGTAGTGGCTGAGCAATGTTCTTCATGGTAACTCATTTTCAATTGATG
ATAGTGGTGAATAAGTAGGAGT-TAGTAT---------------------------------------------------
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---------------------------------------------------------------AAGGAGGAAACCCCAGG
TGATGAGTTCTTGGTTAGTTTGATGTAAATGAAGGGCTTGCATTCCCCCCC--TTTTGTCTCGTTTTAAGAATTTAGAGT
TGGCCATGAGCAAACTAGTCAGAAATGAAATTTTATAGCAAATCAGGAAGAACAAGCCCAAGCCTTGAAGAATGGGATAG
CAGTGAATTATGGGGGAAATCAGTCACTCGCAATATTCTAGGCAAAGAGAACAATTG--GTTCTCACTTCTGTATTATTT
GTGCATATACTGGATTCGTTAAGATATATTTCGATTTTGCATTATGTTGGTCCCATACATGAAATTTCAATATACTTGAG
TACTTCTGTTTTTGTTGT-ATTATTCCTCTAGCTAAACCTCTTTTTT-GTTTCAACATAAGATATCCTTAGTTCTGTTAT
AAGTTGTAACAATGGCCGTCGATTTAGTTCTAGTTGGTTAAATCTAGAGTTGCTAA------------------------
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----------------------------------------
>chr6B_1817
GCA-----------------------------------------------------------------------------
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-------------------GTGGATGGCGGTGAAGGTCGGATTCGCCGTGTATTTAGGAACCTATTTGGGTGCTTTGGTC
GGGGCGACCGGCCTGAGAGTTCCTCACAGTACCATAGTGACTAAGCAATGTTCTTCCTGGTAACTCATTTTCAATTGATG
ATAGTGGTGAATAAGTAGGAGT-TAGTAT---------------------------------------------------
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---------------------------------------------------------------AAGGAGGAAACCCCAGG
TGATGAGTTCTTGGTTAGTTTGATGTAAATGACGGGCTTGCATTCCCCCC---TTTTGTCTCGTTTTAAGAATTTAGAGT
TGGCCATGAGCAAACTACTCAGAAATGAAATTTGATAGCAAATTAGGAAGAACAAGCCCAAGCCTTCAAGAATGGGATAG
CAGTGAATTATGGGGGAAATCAGTCACTAGCAATATTCTAGGCAAAGAGACCAATTG--GTTCTCACTTCTGTATTGTTT
GTGCATATACTGGATTCGTTAAGATAAATTTCGATTTTGCATTATGCTGGTCCCATACATGAAATTTTAATATACTTGAG
TACTTCTGTTTTTCTTGT-ATTATTCCTCTGGCTAAACCTCTTTTTTTGTTTCAACATAAGGTATCCTTACTTCTGTTAT
AAGTTGTAACAATGGCCGTCGATTTACTTGTAGTTGGTTAAATCTAGGGCTGCTAA------------------------
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>chr4B_1890
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--------CGGCCTGAGAGTTCCTCGCAGTCCCATAGTGGCTGAGCAATGTTCTTCTTGGTAACTCATTTTCAATTGATG
ATAGTGGTGAATAAGTAGGAGT-TAGTATTGTTGGAAATATGCCCTAGAGGTAATAATAAAATGGTTATATTATATTTCC
TTGTTCATGATAATTATCTATTGTTCATGCTATAATTGTGTTATCCGGAAATCGTAATACATGTGTGAATACATAGACCA
CAATATGTCCCTAGTGAGCCTCTAGTTAACTAGCTCGTTGATCAATGGATGGTTACGGTTTCCTGACCATGACATTGGAT
GTCATTGATAACGGGATCACATCATTGGGAGAATGATGTGATGGACAAGACCCAATCCTAAGCATAGCACAAGATCGTGT
AGTTCGTCTGCTAGAGATTTTCTAATGTCAAGTATCATTTCCTTAGACCATGAGATTGTGCAACTCCCGGATACTGTAGG
AGTGCTTTGGGTATACCAAATGGCAAAACGTAACTGGGTGGCCATAAAGGTACACTACAGGTATCTCCGAAAGTGTCTGT
TGGGTTGGCACAGATCGAGACTGGGATTTGTCACTCTGTATGACGGAGAGGTATCTCTGGGCCCACTCGATAATGCATCA
TCATAATGAGCTCAATGTGACCAAGTGGTTGGTCACGGGATCATGCATTACAGTACGAGTAAAGTGACTTGCCGGTAACG
AGATTGAGCGAGGTATTGAGATATCGACGATCGAATCTCGGGCAAGTAACATACCGATTGACAAAGGGAATTGTATACGG
GATTACTTGAATCCCCAACATCGTGGTTCATCCGATGAGATCATCGAGGAGCATGTGGGAGCCAACATGGGTATCCAGAT
CCTGCTGTTGGTTATTAACCGGAGAGTCATCTCGGTCATGTCTATGTGTCTCCCGAACCCGTAGGGTTTACACATTTAAG
GTTCGGTGATGCTAGGGTTGTAGAGATATTAGTATGCGGTAACCCGAAAGTTGTTAGGAGTCCCGGATGAGATCTCGGAC
ATCACGAGGAGTTCTGGAATGGTCTGGAGGTAAAGATTTGTATATAGGAAGTCCAGCTTCGGCCAGCGGGAAAGTTTTAG
GGGTCACCGGTATTGTACCGGGACCACCGGAAGGTTCCCCGGGGTCCACCGGGTGGGGCCACCTATCCCGGAGGGCCCCA
TGGGCTGAAGTGGGAAGGGAACCAGCCCCTGGTGGGCTGGTGCGCCCCCCATGGGCCTCCCCCTGCGCCTAGGGTTGGAA
ACCCTGGGGGTGGGGGTGCCCCACCTGACTTGGGGGGCAAGTTCCCCCCCCCTTGGCCACCCCCCCCCCTTGAGATTGGA
TCTCTAGGGGGGCGGCGCCCCCCAGGGCCCCTATATAAAGAGGGGGGAGGGAGTGCTGCGCACGAAAGCCCCTGGCGCCT
CCCTCTCCCCCCGTAACACCTCTCCCTCTCGTTGAGCTTGGCGAAGCCCTGTCGAGATCCCCGCTACTTCCACCACCACG
CTGTTGTGCTGCTGGATCCCCATCAACCTCTCCTTCCCCCTTGCTGGATCAAGAAGGAGGAGACGTCTCTCCCAACCGTA
CGTGTGTTGAACGCGGAGGTGCCGTCCGTTCGGCGCTAGGATTATCGGTGATTTGGATCACGACGAGTACGACTCCATCA
ACCCCGTTCTCTTGAACGCTTCCGCTCGCGATCTACAAGGGTATGCAGATTTACTCCTCTCTCTCGTTGCTAGATGACTC
CATAGATTGATCTTGGTGATGCGTAGAAATTTTTTATTTTTTGCAACGTTCCGCAACAAGTATAATGAGGAAACCTCAGG
TGATGAGTTCTTGGTTAGTTTGATGTAAATGAAGGTCTTGCATTCCCCCCC--TTTTGTCTCGTTTTAAGAATTTAGAGT
TGGCCATGAGCAAACTACTCATAAATAAAATTTGATAGAAAATCAGGAAGAACAAGCCCAAGCCTTCAAGAATGGGATAG
CAGTGAATTATGGGGGAAATCAGTCACTGGCAATATTCGAGGCAAAGAGAACAATTG--GTTCTCACTTCTGTATTGTTT
GTGCATATACTGGATTCGTTAAGATAAATTTCGATTTTGCATTATGTTGGTCCCATACATGAAATTTCAATATACTTGAG
TACTTCTGTTTTTGTTGT-ATTATTCCTCTGGCTAAACCTCTTTTTT-GTTTCAACATAAGATATCCTTAGTTCTGTTAT
AAGTTGTAACAATGGCCATCGATTTACTTGTAGTTGGTTAAATCTAGGGCTGCTAA------------------------
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>chr6B_1934
CTT-----------------------------------------------------------------------------
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--------------------------------------------------------CTGGTAACTCATTTTCAATTGATG
ATAGTGGTGAAGAAGTAGGAGT-TAGTAT---------------------------------------------------
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---------------------------------------------------------------AAGGAGGAAACCATAGG
TGATGAGTTCTTGGTTAGTTTGATGTAAATGAAGGGCTTGCATTCCCCCCCCCC-TTGTCTCGTTTTAAGAATTTCGAGT
TGGCCATGAGCAAACTACTCAAAAATGAAATTTGATAGCAAATCAGGAAGAACAAGCCCAAGCCTTCAAGAATGGGATAG
CAGTGAATTATGGGGGAAATCAGTCACTGGCAATATTCTAGGCAAAGAGAACAATTG--GTTCTCACTTCTGTATTGTTT
GTGCATATACTAGATTCGTTAAGATAAATTTCGATTTTGCATTATGTTGGTCCCATACATGAAATTTCAATATACTTGAG
TATTTGTGTTTTTGTTGT-ATTATTCCTCTGGCTAAACCACTTTTTT-GTTTCAACATAAGATATCCTTAGCTCTGTTAT
AAGTTGTAACAATGGCCGTCGATTTACTTGTAGTTGGTTAAATCTAGGGCTGCTAA------------------------
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----------------------------------------
>SNPs
-------------------------------------------------------------------------S------
--------------------------------------S-----------S-----------------------------
S--------SS-S--S-----S--S----S-S--S---S---------S-S-----S-----S-----------S--S--
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
-SSSSSS-------S------S-------------------S----------------------------------S---
-------S---------------S------------------------------------------------S------S
--SS-S-SS-S---SSSSS----S--S-------SS---------------S--------S-S-----------------
-------------------SS--------------------------S--------SSSS-SSSS-SSS--SSSSSS-SS
--S-SSS-SSS--------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS--S----------------------------------------------------S-----------------
---------------------------------S-------S-----------SSS------------------------
---------------------------------------------------------S----------------------
---------------------S-----------------------------S----------------------------
--------------------------------------------------------------------------------
-S------------------------------------S------------------------S--------------SS
---------------SSS------------------------------------------S------------S------
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------------------------------------------------S---------------------------S---
-------S--------------------S--------------S------------------------------------
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-------------------------------------------------------S------------------------
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-------------------------------------------------S------------------------S-----
------------------------------------------------------------------S----------S--
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------S-----------------------------------
-------------S------------------------------------------------------------------
-----------------SS---------SSSSS-------------------------S---------------------
--------S------------------------------S-----------------S----------------------
---------------------------------------------S----------S------S----------------
-----------S--------------S----------------------------------S------------------
----------------SS----------------------------------S---------------------------
---------------------------------------------------S-----------------------S----
-SS--------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S
>forward_612
--------------------------------------------------------------------------------
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-------------------------------CTATCCAGATGTCCGAGCACC----------------------------
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>reverse_4075
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--------------------------------------------------------------------------CAGAGT
TGGCCATGAGCAAAC-----------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>forward_623
--------------------------------------------------------------------------------
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------------------------------------------TCCGAGCACCCTGAAAATTGA-----------------
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----------------------------------------
>reverse_4158
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------GAG
CAGTGAATTATGGGGGAA--------------------------------------------------------------
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----------------------------------------
