>input_sequence_59882
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-------------------------------GTTCCCGGAGATGCTTCATTTTCTTGCTAATGCATCATCTTTTTCTTGT
CCACTTGTCCTAACTAGCTA----------GCTTGGAGCCTTGGATCCATGGAGTCCCCGCAAAAGAAGGCTGGATCCAT
GGAC------GGCAGCGAGAAGACACCTCTTCCTCATCTGCTGCCGGTGACGGTGGCCAAGAAGACGCCTCGTCCGGATG
TTGTCCGAGAGGTCAGCGAGTGGGTGCTCGTGACCGCCGG------------CATCTTCGTGTTCTCCTTCGGCTTG---
---------GCCTACGCACTCGTGCTCTTCCACGTCCCCTGCAGCCAGGTAAA----GACGAGTCGGCTAGCTCTTCCAC
GTCGCTATTCATG---------------------------------------------------------TTCCTTCGCG
TTCTGAATTTCCTCCTCCGCAGTCCTCCTTCTTTCTTCGGTGCGGCCAGCTGACGGATGCGGAGGAAGCTGTGGCGAACG
CCCTAGGCATCGGGATGCTGTGCTGCGTCGCACTCCAGGCGGCCGCGGCGGTGCTGG-CGCTGCGTCTCCAGTGCCGCCG
TCGCTGGGTCCGCCGTGCCCTCGCCTACCTCGCGCTCGCGCTCGCCATCGGCGGCCACTGCTTCTACGCCGCGCTAGCCC
GCCTCTTCCTCGTCGCCGACCCAGGAGACCTCTTCTTCAGGATCTGCTCAACCGTGGGCATCTTCGTCTGCGCGGCGGGA
GACACCATCAGCTTCCTGGCCCTCATCCTCGGCCGC---------GAGGAGTAGGACTGGGGAGCAGGGCAAGCA-----
--GCGGATCATGTCTT------------------GTGAGGTACTGATGATGAGTGACTGATCGAGTGCGT--------AC
GTAGACTATGCGTGAATAATTATGCTAGCTAGCTGCGACGCC--------------------------------------
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-----------------------------CTGCCCTATGTGTGAATTTACTAGTGTGCTGCTAGTAGCCTAGTACACCGT
ACTGCCCTATATATGTGTGAATTTTGGTCGTCTTTGATGCAGTAGTATTTCCTCTGTA----GTATGATCAGACATCATT
TATATGCTTATTTATC--CAGCTTCCGTATAATTGATGTTGGTCAGAATGTCACTGCAG------TTTATATATATTCTC
AAGTATATACTCCTATATGTTAACCACTGTTTTTCATGAAACCGCTGGCGTAATCCACT---------------------
----------------GGAGATTGTTGGGGTACAGTTAGCA----AAGAAATTTAGCTTATAGTT---------------
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>chr5D_1_TraesCS5D01G043700
TCCCATCACTTTCTTCCTTCTTTGGACACACTTTTCAAGTAGATGACAAGGGTCAACATGACCATGCAGACCTTTGGAGT
CCCACC--ATCCATTCTCAACAAAAATAAATAAGCTCATGAATGATCTCGTGGAAAACCCAGCGTCATGTGGTAATACAT
AATGTAACTCAAAGTTAAGGTTGCATCGGCTAAAGACATCCAAATCATGCATAAAAGAAGGATATTAAAAACAATGAAAT
GATTCGGTCAAAATGTCGTAGAACCTAGCTTACTAAAATTATTGCTTTGCTTACTCGCAAAAAAACAAAAAGAGTTTGCT
TTGGCACCCGTCGTTAAGAGTGCTGTTACTAGGAACCATACCAGTTGAAAATGACCGCGCGCGTAGCTAAAATGAGCTAG
CTATTATTTTACGGCATGTCATGTGTGTGCTGAGGTTCACTCAAACTTTTGTGCATCTGCCAGCAATTAGGCTGGTTGTA
ATGGTAGTATCATAGTTAGTATTATGCATGTCAACTAGACAATTTTGATGAGGTGTCATAGAATTAAATGAAGAAAGAGA
GGATTGAGTGTCATATCATGATACCGTATCATAATAAATGCTGCGTCATGCATGGCAATAAATAAAGTATTACATAATAG
TAGTATATGATACTATACATTAAGAAGATAGTATCATACACTAATATCATATGCATGATACTAATTTATGATACTTCCCA
TTACAACCAGCCTTAAG---------------------------------------------------------------
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--------------------------------------------------------CATCCCATTGCATTGCCAAAGATG
GCATGCCCTCTCCTT---------------TGTCCACAGTCACATGCTCCTCTGTGTGCGCGCGCGCGGATCAATCGACA
CGTCGTGGTGGGCGCCCACACTGCGTCGCTTTGCTTCGTCTCGG------------------------------------
------------CTCTTAAACAGCTCCACAC-----CATAG-------CCTCCAGGCTCCA-------------------
----------------AGTACAGGAGTAGGGAAGCATCACCCACATCATTCGACGAGCTGCGGTGAGTCCATCCCCTCCT
CCTTCGTCTCCCCCTCTTCCTCCTTCTCCCCGTTCCCGGAGATGCTTCATTTTCTTGCTAATGCATCATCTTTTTCTTGT
CCACTTGTCCTAACTAGCTA----------GCTTGGAGCCTTGGATCCATGGAGTCCCCGCAAAAGAAGGCTGGATCCAT
GGAC------GGCAGCGAGAAGACACCTCTTCCTCATCTGCTGCCGGTGACGGTGGCCAAGAAGACGCCTCGTCCGGATG
TTGTCCGAGAGGTCAGCGAGTGGGTGCTCGTGACCGCCGG------------CATCTTCGTGTTCTCCTTCGGCTTG---
---------GCCTACGCACTCGTGCTCTTCCACGTCCCCTGCAGCCAGGTAAA----GACGAGTCGGCTAGCTCTTCCAC
GTCGCTATTCATG---------------------------------------------------------TTCCTTCGCG
TTCTGAATTTCCTCCTCCGCAGTCCTCCTTCTTTCTTCGGTGCGGCCAGCTGACGGATGCGGAGGAAGCTGTGGCGAACG
CCCTAGGCATCGGGATGCTGTGCTGCGTCGCACTCCAGGCGGCCGCGGCGGTGCTGG-CGCTGCGTCTCCAGTGCCGCCG
TCGCTGGGTCCGCCGTGCCCTCGCCTACCTCGCGCTCGCGCTCGCCATCGGCGGCCACTGCTTCTACGCCGCGCTAGCCC
GCCTCTTCCTCGTCGCCGACCCAGGAGACCTCTTCTTCAGGATCTGCTCAACCGTGGGCATCTTCGTCTGCGCGGCGGGA
GACACCATCAGCTTCCTGGCCCTCATCCTCGGCCGC---------GAGGAGTAGGACTGGGGAGCAGGGCAAGCA-----
--GCGGATCATGTCTT------------------GTGAGGTACTGATGATGAGTGACTGATCGAGTGCGT--------AC
GTAGACTATGCGTGAATAATTATGCTAGCTAGCTGCGACGCC--------------------------------------
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-----------------------------CTGCCCTATGTGTGAATTTACTAGTGTGCTGCTAGTAGCCTAGTACACCGT
ACTGCCCTATATATGTGTGAATTTTGGTCGTCTTTGATGCAGTAGTATTTCCTCTGTA----GTATGATCAGACATCATT
TATATGCTTATTTATC--CAGCTTCCGTATAATTGATGTTGGTCAGAATGTCACTGCAG------TTTATATATATTCTC
AAGTATATACTCCTATATGTTAACCACTGTTTTTCATGAAACCGCTGGCGTAATCCACT---------------------
----------------GGAGATTGTTGGGGTACAGTTAGCA----AAGAAATTTAGCTTATAGTTCTATTTCAGCATACA
GAATAATTTCAGTTATGCTTGTGTGCA------TATATACTGAGTGACTCACATGCATAATTAGCTTATCTTGGGTCTAG
CTAATTCATGTTGGTGAAATTGGTACTGCACTTTATATTGATACACACATGCATGTTGTTTCAACTTAGGTTCCTAGTTT
CAACTTGCTTGCTGATCGAGCAGTTTTCTAGAGTTGTGGAAATGCAACTTAAAGTTCCTACATGTTGCCTTCGGAGCAAG
TGGGATTAG-CCCTTGGTGCCTTCGGAGCACGATGACAATTGGAAGTGGTTCATCGGGGCGGTAGCGGGTAATAGTATTC
TTCGTTCGGATCTATGATCTGGTTGAGCAAAAATCCCGCTATTTCCTCTTGAAGTGCTCATATGCGCTCCGTTGGTAGGA
GCTTCTCCCGCACCTTATTGAACTGTTAAGAAGGAGATCAATATGCATGTGTATTAGTTGTGTGACTAGATATCGATAAT
GATGTAAAAATTGTGAATAGTGTTCTGGCAAACATACCCATAGCTGTCTATCAGATTTGCTCCTTTCGGACACCATCATG
CGAATGTTCTCGCAAACATAGTATGCACACAGATCAGTCCCCGGCGCCTGCTTCAGGGCCTTTACGAGAATGGAATTTAA
TCAGATAATAATTATAAAAGCATGA----TAATTAAT----GGTATTGAAACAAGAATTAAAGATATG--ATAGCTAGCT
AGTACTACTTAATTACTTACCTTGGGCCGCAACCAATACAGCTTTTTTCTCCATTTGCCTGGAGTCACCTTGATGAACTT
TGCCCAAGCCCTGCCCGCCAGCAAAGAAAATGAATA--AAGGGGTTATTAAATAGTTGATATCAGGAAATGATGAACTAA
TTTAATAGGCCGAGATATAGTTAATAATGATTGAAATTACCTGTCAACTATCCCCTTCACGATGGCGAAGTCACTTTCTT
CCTTAAGTAGTGAGTCCAGTACTTCAAGTGTTCCTTCATCAACT
>chr5A_27
--------------------------CACGCTTTTCAAGTAGATGATAAGGGTCAAGATGACCATAAAGACCTTTGAAGG
CCCACCATATCCATTCTCAACAAAGATAAATAAGCTCGGGAATGATCTTATGGAAAACCCAGCGTCACGTGGTAATACAC
AATGTAACTCGAAGTTAAGGTTGCATCAGCTAACGACATCCAA-TCATGCATAAAAAAGATATTA-AAAAACAATGAAAT
GATTCGGTCAAAATGTCGTAGAAGCTAGCTTGCTAAAATGATTGCTT---------------------------------
-TGGCACCCGTCGTTAAGAGTGGTGTTACTAGAAATCATACTAGTTGAAAATGACCGCGCGCGTAGCTAAAATGAGCTAG
CTATTTTTTTACTGCATGTCATGTGTGTGCTGAGGTTCACTCACAGTTTTGTACATCTGCCAGCAAA-------------
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------------TTAAG---------------------------------------------------------------
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--------------------------------------------------------CATCCCATTGCATTGCCAAAGATG
GCATGCCCTCTCCTTCCCCGTGGTTTCCTTTGTCCACAGTCACATGGGCCTCTGTGTGCGCGCGCGCGGCTCGATCGACA
CGTCGTGGTGGGCGCCCACGCTGCGTCCCTTTGCATCGTCTCGGCTCCACACGTCGTGGTGTGGGCGCCCACGTGCCCTG
CGTTGCTTTGCTCTCTTAAACAGCTCCACAC-----CATAGTCCTCCGCCTCCAGTCTCCAACACCATAGTCACGCACGT
CGCTAGCCAGCTAGGGAGTACAGGAGTAGGGAAGCATCTCTCACATCGATCGACGAGCGGCGGTGAGTCCATCCCCTCCT
CCTCCGTG------------------TCCCCGTTCCCGGAGATGCTTCACTTTCATGCTAATGCTGCATCTTCTTCTTGT
CCACTTGTCCTGACTAGCTA----------GCTTGGAGCCTTGGATCCATGGAGTCCCCGCAGAAGAAGGCTGGATCCAT
GGATGGCACTGGCAGCGAGAAGACGCCTCTTCCCCATCTGCTGCCGGTGACCGTGGCGAAGAAGACGCCTTGTCCGGATG
TTGTCCGAGAGGTCAGCGAGTGGGTGCTCGTGACCGCCTTCTCCTTCGCCTTCGCCTTCGTGTTCTCCTTCGGCTTG---
---------GCCTACGCACTCGAGCTCTTCCACGTCCAGTGCAGCCAGGTAAA----GACGAGTCGGCGAGCTCTTCCAC
GTCGCTATTCATG---------------------------------------------------------TTCCTTCGCG
TTCTGAATTTCCTCCTCCGCAGTCCTCCCTCTTTCTTCGGTGCGGCCTGCTGACGGACGCGGAGGAAGCTGTGATGAACG
CCCTAGGTATCGGGATGCTGTGCTGCGTCGCGCTCCAGGCGGCCGCAGCGGCGCT-G-CGCTGCGTCTCCAGTGCCGCCG
TCGCTGGGTCCGCCGTGCCCTTGCCTACCTCGCGCTCGCGCTCACCATCGGCGGCCACTGCTTCTACGCCGCGCTAGCCC
GCCTCTTCCTCGTCGCCGACCCAGGAGACCTCTTCTTCAGGATCTGCTCAACCGTGGGCATCTTCGTCTGCGCGGCGGGA
GACACCATCAGCTTCCTGGCCCTCATCCTCGGCCGC---------GAG---TAGGACTGGGAAGCAGGGCAAGCA-----
--GCGGATCATGTCTATGGATCCTCTCATGACTCGTGAGGTACTGATGATGAGAGATTGATGAATATTGAGTGCAATAAC
GTAGAGCGTGCATTAT-----------GCTAGCTGCGACGATTGATCGAGTGCCCTGCCCTATGTTTGTGTGAATTTACT
AGTGTACTGCCTTATCTTTGATGCAGTAGTATTTGACCTTTTCTCTATATGACCAGACATCATTTATATGCTTATTTGTG
CAGCTTATCTGTGTGAATTTATTAGTGTACTGCCCTATGTGTGAATTTATTAGTGTACTGCCCTATGTGTGAATTAC---
-----------------TGAATTATGGTCGTCTTTGATACAGTGGTATTTGAC-TTTTCTCTATATGATCAGACATCACT
TCTATGCTCATTTATCTCCAGCTTCAGTATAATTCATGTTGGTGAGATTGTCACTGCATGCACTTTTTATATATATTCAT
GAAGTATA-----TATATGTTAACCATTGTTTTGCATGCAACCGCTGGCGTAATGCATTGGGGGTATATATAGCTGTTGG
TTCCCCTGAACCTCTAGGA-ATTGTTGCGGTACAGCTAGCAAATTAAGAAATTTTGCTTATAGTTTTATTTCACCATACA
AAATTATTTCAGTTATGCTTGTATGGA------TATATACTCAGTGCCTCACATGCATAATTAGCTTATCTTGGGTCTA-
---ATTGATGTTGGTGAAATTGGTAGTGCAGTTTATATGCATACACACATGCATGTTGTTTCAACATATGTTCCTAGTAT
CAACTTCCTTGCTGATCAAGCAATTTTCTAGAGTTGCGGAAATGCAACTTAAAGTACCT---------------------
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>chr5A_731
TGAATTGTTGTCGTCTTTGATGCAGTTGTATTTGACCTTTCCTCTATATGCTCAGACATCATTTATATGCTTATTTATCC
AGCTTTGGTATAATTCATCAAGTGCTGTATGTCTGAATCTACTAGTGTACTATTAATTGGATAGATCGACGATACTGGAT
AGTACTCCCTCTGTAAGTTAATATAAGACATTTCTTAAAACAATTATAATGTAAAAAACGGCTTATATTATGTTACGGAG
GAAGTATTTGTGTAATGTGTTACCCTGAATTATGGCCATCTCAGTATTCGACCTTTTCTCCATATGACCAGACATCATTT
ATATGACCTTTTTTTAGATGTGTGCACCAGGAGTGGTCAATATGCCTCCTAATTCTAGAATAATTGTTTTTACACACATT
TTGATAAAAAGATCAACCCATGAAAATTTTGTTGCCGATTAAGTTAATCAGTTGGTAGAAAAGTCGGATTGTGTGAATGT
GTATTGAAGGTGTTTGATGAAATGTTTTGTAGCGCCCCGGGACTGACACTATGCACATCTAGCAACCTCCAATAGCCTCC
GCATAATATCGATCTTAAGGTGTCACCTTCACACAACGTACACATGGAAACAACGTATATCATTGAGACGTTGGCATTGC
GAGCTTAGGTGATGATGAGTTTATCTTGTTGTCCGCCATCACGGTGGCACATGAGTCGAGGGGGAACATGCACATCCGAT
GCATCATGGTATTTAAGCATTGTTAGCCCATTTTAGTTGCCAATCTTCTTGATTTCCTATGCCAGAATTTCACTTGATCA
ATTATAAACAACTTGATGTGCATATGTAACCTAATTTGAATTCTGGCGCAAGCTACATTAATTTCATGGTCAAACTTAAC
TTGACGATCTCGTTATGTCATATGGTGGATTAGAATGCACAACTACGGATCGCCGTACAGGACGGCCGGCTTCATCCTAG
TCAGTAACAACCCATATGTAATGCCTACGTTAATTGTATCATCTATGTTGGATGTTGTATAATTTGTTGTTGCCTCTTAT
CATTGTTTTGCATCATGCATCATAATCATCATTGCTTTGTTTGTGACATATTTAATTTTGTTGTGATCTTGTGTGGAACT
CCTTCCCTTCATCTTCATCTTGCTCGTTCCAACCAAACCATCATCAAGTTTCAAAAATCCCATCTCAATCCTTTGCTTTT
TCTTTCTTTTGTCCAATAAATTCAAGTGGCATTTTTTCCTGGTTCAGATTAATGTTCACTATATTTCTATAGTCTCTACA
CCATGGCAAGACCCACTCCTCCAAATTTCAGCTCATTTGGGAATGATCTGGTTAGACTCGATGATGATGAGTTTATTTTG
TCTGTCCGCCATCAGGGTGGCAAATGAGTCTAGGAGACGCATGCACACTCGTGCATCATGGTAGTTAAGGGTTGTTATCC
CATTTTAGGAGCCAATCTTCAGTTGATTTCTTACACCGGAATTCCCCTTGATCAATCAGAAATAACTTGATGCGCATATG
TAACCTGATATGAATTCTGACGCAAGCTACATTAATATAATGGTCAAACTTAAGTTGTGATCTCGTTATGTCATAGATTC
TTCGAACCTCAGTTTGCGCTAAAGAAAAGTTAGTTGTCCTAGTAAAAATAGTTTAGAGGCATGGTCATTTGATATGTGAG
CATGTGATGGATTAGCATGCAAGGATCTTGATTTTTTTCCCAAGTGATGGATTTTCCATGTGTTCAGAAGAGATTAACTA
ATGACCATCTCACTTTATTAAAGCAAGGGTTTATATATATTAAGGTTTATAGTTTAGGGTTAGGCTTTAGGCTTTACAAC
AATATCTGGATTGTTACGATTAGAGCAAAGCTAATTCCTTCATAGGAGCCGGTCTCTTCCCGGTAAAGTAATGAGAAAGA
AGGAAAACTAATAGAGAATTACTTATGTATATTGACATCGCCTAGAAATTAAAAAATATATGAAAAGGGATAAAAGGGAG
AAAAATTAAGCTCACTCAAGATAATGCCTTGAAAGCACGGATTGTTGGAAAGCACGTGATGGCTCGGCACTTTATGCCTT
GGTGGAGACGTGTCATCAATGGCCATCACTTTCTTCCTTCTTTGGACACGCTTTTCAAGTAGATGATAAAGGTCAAGATG
ACAATGCAAAACTTTGAAGCCCCATCATCCATTCTCAACAAAGATAAATAAGCTCAGGAATGATCTCGTGAAAAACCCAG
TGTCACATGGTATTACACAATGTAACTCATAGTTAAGGTTGCATCAGCTAACGACATCCAATCATGCATAAAAAAGATAT
TAAAAAACAATGAAATGATTTGCCTAAAATGTCTTAGAAGCTAGCTTATTAAAATGATCGATTTGGCACCCGTCGTTAAG
AATGGTGTTACTAGAAATCACGCTAGTTGAAAATGACCGCGCGCGTGTAGCTAAAATAAGCTAGCTAATTTTTTACTGCA
TGTCATGTGTGTGCTGTGGTTCACTCACACTTTTGTGCATCTGCCAGCAAATTAAGCATCCCATTGCATTGCCAAAGATG
GCATGCCCTCTCCTTCCCCGTGGTTTCCTTTGTCCACAGTCACATGGGCCTCTGTGTGCGCGCGCGCGGCTCGATCGACA
CGTCGTGGTGGGCGCCCACGCTGCGTCCCTTTGCATCGTCTCG-------------------------------------
----------------------GCTCCACAC-----CATAGTCCTCCGCCTCCAGGCTCCAACACCACACCATAGTCACG
CTAGGGACC-------AGTACAGGAGTAGGGAAGCATCTCTCACATCGATCGACGAGCGGCGGTGAGTCCATCCCCTCCT
CCTCCGTG------------------TCCCCGTTCCCGGAGATGCTTCACTTTCATGCTAATGCTTCATCTTCTTCTTGT
CCACTTGTCCTGACTAGCTA----------GCTTGGAGCCTTGGATCCATGGAGTCCCCGCAGAAGAAGGCTGGATCCAT
GGATGGCACTGGCAGCGAGAAGACGCCTCTTCCTCATCTGCTACCGGTGACCGTGGCGAAGAAGACGCCTCGTCCGGATG
TTGTCCGAGAGGTCAGCGAGTGGGTGCTCGTGACCGCCTTCTCCTTCGCCTTCGCCTTGGTGTTCTCCTTCGGCTTG---
---------GCCTACGCACTCGAGCTCTTCCACGTCCAGTGCAGCCAGGTAAA----GACGAGTCGGCGAGCTCTTCCAC
GTCGCTATTCATG---------------------------------------------------------TTCCTTCGCG
TTCTGAATTTCCTCCTCCGCAGTCCTCCCTCTTTCTTCGGTGCGGCCTGCTGACGGACGCGGAGGAAGCTGTGATGAACG
CCCTAGGTATCGGGATGCTGTGCTGCGTCGCGCTCCAGGCGGCCGCAGCGGCGCT-GGCGCTGCGTCTCCAGTGCCGCCG
TCGCTGGGTCCGCCGTGCCCTCGCCTACCTCGCGCTCGCGCTCACCATCGGCGGCCACTGCTTCTACGCCGCGCTAGCCC
GCCTCTTCCTCGTCGCCGACCCAGGAGACCTCTTCTTCAGGATCTGCTCAACCGTGGGCATCTTCGTCTGCGCGGCGGGA
GACACCATCAGCTTCCTGGCCCTCATCCTCGGCCGC---------GAG---TAGGACTGGGAAGCAGGGCAAGCA-----
--GCGGATCATGTCT-----------------------------------------------------------------
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>chr5B_780
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-----------------------------------ACAGTCACATGCTCCTCTGTGTGCGCGCGCGCGGATCAATCGACA
CGTCGTGGTGGGCGCCCACGCTCCGTCGCTTTGCTTCGTCTCGG------------------------------------
------------CCCTTAGACAGCTCCACACCATAGCATAG-------CCTCCAGGCTCCA-------------------
----------------AGTACAGGAGTAGGGAAGCATCTCCCACATCATTCGACGAGCGGCGGTGAGTCCATCCCCTCCT
CCTCCGTCTCCCCCTCCTCCTCCTTCTCCCCGTTCCCGGAGATGCTTCATTTTCTTGCTAATGCTTCATCTTCTTCTTGT
CCACTTGTCCTAAGTCCTAACTAGCTAGCTGCTTGGAGCCTTGGATCCATGGAGTCCCCGCAAAAGAAGGCTGCATCCAT
GGACGGAAGCA------------AGACG---CCTCATCTGCCGCCGGTGACCGTGGCCAAGAAGACGCCTCGTCCGGATG
TTGTCCGAGAGGTCAACGAGTGGGTGCTCGTGACCGCCGG------------CATCTTCGTGTTCTCCTTCGGCTTG---
---------GCCTACGCACTCGTGCTCTTCCACGTCCCCTGCAGCCAGGTAAA----GACAAGTCGGCTAGCTCTTCCAC
GTCACTATTCATG---------------------------------------------------------T---------
-----------------------------TCTTTCTTCGGTGCGCCCTGCTGACGGACGTGGAGGAAGCTGTGATGAACG
CCCTTGGCATCGGGATGCTGTGCTGCGTCGCGCTCCAGGCGGCCGCAGCGGTGCT-GGCGCTGCGTCTCCAGTGCCGCCG
TCGCTGGGTCCGCCGTGCCCTCCCCTACCTCGCGCTCGCGCTCACCATTGGCGGCCACTGCTTCTACGCCGCGCTAGCCC
GCCTCTTCCTCATCGCCGACCCAGGAGACCTCTTCTTCAGGATCTGCTCAACCGTGGGCATCTTCGTCTACGCGGCGGGA
GACATCATCAGCTTCCTGGCCCTCCTGCTCAGCCG------CGAGGAG---TAGGACTGGGAAGCAGGGCAAGCACCAAG
CAGCGGATCATGTCTATGGATCAGCTCGTGACACGTGAGTTACTGATGATGAGTGACTGATGAATATTGAGTGCGATAAC
GTAGAGTGTGCATTAT-----------GCTAGCTGCGACGATTGATCGAGTCCCCTGCCCTATGTGTGTGTGAATTTACT
AGTGTACTA-----------------------------------------------------------------------
------------------------------------------------------------CCCTGTGTGTGAATTAC---
-----------------TGAATTGTGGTCGTCTTTGATACAGTAGTATTTGACCTTTTCTCTGTATGACCAGACATCATT
TATATGCTTATTTATC--TAGCTTCGGTATATTTAAT-------------------------------------------
---------------TATGATAACCATTGTTTTTCATGCAACCGCTGGCGTAATCCATTGGGGG----TATAGCTGTTGA
TTCCCCTGAACCTCTAGGAGATTGTTGGGGTATAGCTAGCA----AAGAAATTTAGCTGATAG--CTATTTCAGCATACA
GAATAATTGCAGTTATGCTTGTACATATATAGTTATATACTCAGTGACTCCCATGCATAATTATCTTATCTTGGGTCTA-
---ATTGATGTTGCTGAAATTGGTA-------------------------------------------------------
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>chr1D_1087
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-----------------------------------------------CATGGAGTCTCCGCAGAAGAAGGCTGCATCCAT
GGACGGCAGCAAGAGCAAGACGACGG------CTCATCTGCTGCCGGTGACCGTGGCCAAGAAGACGCCACGTCCGGATC
ATGTCCGATGGGTCAGCGCGTGGGCGCTCTTCACCGCCAG------------CGTCTTCGCCTTCTCCTTCGCCGTGGGC
TCTGCAATCGCCTACGCACTCGACCATTTCCACGTCGCCTGCAGCCAGGTAAGGATCGACGAGTTGCCTGGTGTACTGTA
GCATCGCCAAATCTCCCCGATTCTCCTGCCTTCTCAATCAATTTCTTCTG------------------------------
------------TCCTCCACAGTCCTCCTTCTTCCTCCGGTGCGACCAGCTGACGGACGCGGCGGAAGCCGTGGTGAATG
CCCTAGGGACCGGGATGCTGTGCTGCGCCGCGCTCCAGGCGGCCGCGGCGGTGCT-GGCGCTGCGGCTCCGTTGCCG---
---------CCGTCGCTCCCTCGCCTACCTCGCGCTCGCGCTCACCATCGGCGGCCACTGCATCTACGCCGCCATAGCCC
ACCTCTTACTCGTCGCCGACCCAGGAGACCTCTTCTTCGGGATCAGCTTCGCGGTGAGCATCGTCTTCTTCGCGGCGGGA
GACATCATCAGCTTCGTGTCCCTCCTCCGCGGCGGCGAGGACGAGGAG---TAGGACTGGGGAGCAGGGCAAGCA-----
--GCGGATCATGTC------------------------------------------------------------------
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>chr1B_1087
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-----------------------------------------------CATGGAGTCTCCGCAAAAGAAGGCTGCATCCAT
GGACGGCAGCAAGAGCAAGACGCAGACG---CCTCATCTGCTGCCGGTGGCCGTGGCCAAGAAGACGCCACGTCCGGATC
TTGTCCGGTGGGTCAGCGCGTGGGCGCTCTTCACCGCCGG------------CGTCTTCGCCTTCTCCTTCGCCGTGGGC
TCTGCAATCGCCTACGCACTCGACCATTTCCACGTCGCCTGCAGCCAGGTAAGGATCGACGAGTCGCCTCGTGTACTGTA
GCCTCGCCAAATCTCCCCGATTCTCCTGCCTTCTCAATTTCCTCTGCCCTCCACACTTCCACAGTCCTCCT---------
-----------------------------TCTTCCTGCGGTGCGACCAGCTGACGGACGCGGCGGAAGCCGTGGTGAACG
CCCTGGGGACCGGGATGCTGTGCTGCGCCGCGCTCCAGGCGGCCGCGGCGGTGCT-GGCGCTGCGTTTCCGGCGCTG---
---------CCGCCGCTCCCTCGCCTACCTCGCGCTCGCGCTCACCATCGGCGGCCACTGCATCTACGCCGCCATAGCCC
ACCTCTTACTCGTCGCCGACCCAGGAGACCTCTTCTTCGGGATCAGCTTTGCAGTGACCATCGTCTTCTTCGCGGCGGGA
GACATCATCAGCTTCCTGTACCTCCTCCTCGGCGGCGAGGACGAGGAG---TAGGACTGGGAAGCAGGGCAAGCA-----
--GCGGATCATGTC------------------------------------------------------------------
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>chr5D_2355
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-------------------------------------------------------TCCTACATGTTGCCTTCGGAGCCAG
TGGCATTAG-CC-TTGGTGCCTTCGGAGCACGATGACAATTGGGAGTGGTTCATGGGGGGTGTAGCGGGTAATAGTATTC
TCCTTTGGGATCTATGACCTGGTCGAGCAAAAATCCCGCTATTTCCTCTTGAAGTGCCCGTATGCGCTCC--TGGTAGAT
GCTGATCCCGCACCTGATTGAACTGTTAAGAAGGAGATCAATATGCATGTGTATTAGTTGTGTGACTAGATATCGATAAT
GATGTAAAAATTGTGAATAGTGTTCTGGCAAACGTACCCATAACTGTCTATCAGATTTGGTCCTTTCGGACGCCATCATG
CAAATGTTCTCGTAAATGTAGTATGCACACAGATTAGTCCCTGGCGCCTGCTTGAGGGCCTTTACGAGAATGGAATTTAA
TCAGATAATAATTAATCAAGCATGA----TAATTTAT----GGTATTGAAACAAGAATTAAAGAAATG--GTAGCTAGCT
AGTACTACTTAATTACTTACCTTGGATCGAAACCAATACAGCTTTTTTCGCCATTTGCCTGGAGTCACGTTGATGAACTT
TGCCCAAGCCCTGCCCGCCGGCAAAGAAAATGA--A--AAGGGGTTATTAAATAGTTGATATCAGGAAATGACGAAC---
-TAAATAGGCCGAGATATAGTTAATAATGATTGAAATTACCTGTCGACTATCCCCTTCAAGATGGTGAAGTCACTTTCTT
TTTTAAGTAGTGAGTCCAGTACTTCAACTGTTCCTTCTTCAACT
>chr4D_2355
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-------------------------------------------------------TCCTACATGTTGCCTTCGGAGCTAG
TGGCATTTG-CC-TTGGTGCCTTCGGAGCACGATGACAATTGGGACTGGTTCATGGGGGCGGTAGCGGGTAATGGTATTC
TCCTTTGGGATCTATGACCTGGTCGAGCAAAAATCCCGCTATTTCCTCTTGAAGTGCTCGTATGCGCTCCGTTGGTAGGA
GCTACTCCCGCACCTCATTCTACTGTTAAGAAGGAGATCAATATGCATGTGTATTAGTTGTGTGACTAGATATCGATAAT
GATGTAAAAATTGTGAATAGTGTTCTGGCAAACGTACCCATAGCTGTCTATCAGATTTGCTTCTTTCGGACACCATCATG
CGGATGCTCTCGCAAACGTAGTATGCACATACTTCAGTCCCCGACGCCTGCTTCAGGGCCTTTACGAGAATAGAATTTAA
TCAGATAATTATTAATCAAGCATGA----TAATTAAT----GGTATTGAAACAAGAATTAAAGAGATG--GTAGCTAGCT
AGTACTACTTAATTACTTACCTTGGGTCGAAACCAATACAGCTTTTTTCTCCATTGGCCTGGAGTCACGTTGATGAACTT
TTCCCAAGCCCTGCCCGCTGGCCAAGAAAATGAATA--AATGAGTTATTAAATAGTTGATATCAGGAAATAACGAAC---
-TAAAGAGGCCGAGATATAGTTAATAATGATTGAAATTACCTGTCGACTATCCCCTTCAAGATGGTGTAGTCACATTGTT
TTTTAAGTAGTGAGTCCAGTACTTCAACTGTTCCTTCTTCAACT
>chr6D_2355
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-------------------------------------------------------TCCTACATGTTGCCTTCAGAGCAAG
TGGGATTAG-CCCTTGGTGCCTTCGGAGCACGATGACAATTGGAAGTGGTTCAGGGGGTTGGTAGCGGGTAATAGTATTC
TCCGTTCGGATCTATGACCTAGTCGAGCAAAAATCCCGCTATTTTCTCTTGAAGTGCTCGTATGCGCTCCGTTGGTAGGA
TCTGCTCCCGCACCGAATTGAACTGTTAAGAAGGAGATCAATATGCATGTGTATTAGTTGTGTGACTAGATATCGATAAT
GATGTAAAAATTGTGAATAGTATTTTGGCAAACGTACCCATAGCTGTCTATCAGATCTGGTCCTTTCGGACGCCATCATG
CGAATACTCTCGCAAACATAGTATGCACACAGATCATTCCCCGGCGCCTGCTTCAGGGCCTTTACGAGAATGGAATTTAA
TCAGATAATAATTATTCAAGCATGA----TAATTAAT----GGTATTGAAACAAGAATTAAAGATATG--GTAGCTAGCT
AGTACTACTTAATTACTTACCTTGGGTCGATACCAAAACAG-TTTTTTTTCCATTGGCCTGGAGTCACGTTGATGAACTT
TGCCCAAGCCCTGCCCGCCAGCAAAGAAAATGA--ATAAAGAGGTTATTGAATAGTTGATATCAGGAAATGACGAACTAA
TTAAATAGGCCGAGATATAGTTAATAACGATTGAAATTACCTGTTGACTATCCCCTTCACGATGGCGAAGTCACTTTCTT
CCTTAAGTAGTGAGTCCAGTACTTCAACTTTTCCTTCATCAACT
>chr3D_2355
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-------------------------------------------------------TCCTACATGTTG-CTTCGGAGCCAG
TGGCATTAG-CC-TTGGTGCCTTCGGAGCACGATGACAATTGGGAGTGGTTCATGGGGGCGGTAGCGGGTAATAGTATTC
TTCTTTGGGATCTATGACCTGATCGAGAAAAAATCCCGCTATTTCCTCTTGAAGTGCTCGTATGCGCTCCGTTGGTAGGA
GCTAATCCCGCACCTGATTGAACTGTTAAGAAGGAGATCAATATGCATGTGTATTAGTTGTGTGACTAGATATCGATAAT
GATGTAAAAATTGTGAATAGTGTTCTGGCAAACGTACCCATAGCTGTCTATCAGATTTGGTCCTTTCGGACGCCATCATG
CGAATGTTCTCGCAAACGTAGTATGCACACATATCAGTCCCCGGCGCCTGCTTCAGGGCCTTTACGAGAATGGAATTTAA
TCAGATAATAATTAATCAAGCATGA----TAATTAAT----GGTATTGAAATAAGAATTAAAGAGATGGTATAGCTAGCT
AGTACTACTTAATTACTTACCTTGGGTCGAAACGAATACAGCTTTTTTCGCCATTTGCCTGGAGTCACGTTGATGAACTT
TGCCCAAGCCCTGCCCGCCAGCAAAGAAAATGA--ATAAAGGGGTTATTAAATAGTTGATATCCGGAAATGACGAAC---
-TAAATAGGCCAAGATATAGTTAATAATGATTGAAATTACCTGTCGACTATCCCCTTCAAGATGGTGAAGTCACTTTCTT
TTCTAAGTAGTGAGTCCAGTACTTCAACTGTTTCTTCTTCAAC-
>chr3D_2355
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-------------------------------------------------------TCCTACATGTTGCCTTCGGAGCCAG
TGGCATTTG-CC-TTAGTGCCTTCAGAGCACGATGACAATTGGGAGTGGTTCATGGGGGCGGTAGTGGGTAATAGTATTC
TCCTTTGGGATCTATGACCTGGTCGAGCAAAAATCCCGCTATTTCCTCTTGAAGTGCTCGTATGCGCTCCGTTGGTAGGA
GCTGCTCCCGCACCTGTTTGAACAGTTCAGAAGGAGATCAATATGCATGTGTATTAGTTGTGTGACTAGATATCGATAAT
GATGTAAAAATTGTGAATAGTGTTCTGGCAAACGTACCCATAGCTATCTATCAGATTTGCTCCTTTCGGACGTCATCATG
CAAATGTTCTCGCAAATGTAGTATGCACACAGTTCAGTCCCCGGCGCCTGCTTCAGGGCCTTTACGAGAATGGAATTTAA
TCAGATAATAATTAATCAAGCATGA----TAATTAATTACTGGTATTGAAACAAGAATTAAAGAGATG--GTAGCTAGCT
AGTACTACTTAATTACTTACCTTGGGTCGAAACCAAAACAACTTTTGTCGCCATTTGCCTGGAGTCACCTTGATGAACTT
TGCCCAAGCCCTGCCCGCCGGCAAAGAAATAGA--ATAAAGGGGTTATTAAATAGTTGATATCAGGAAATGACGAAC---
-TAAATAGGCCGAGATATAGTTAATAATGATTGAAATTATCTGTCGACTATCCCCTTCAAGATCGTGAAGTCACTTTCTT
TTTTAAGTAGTGAGTCCGGTATTTCAACTGTTCCTTCTTCAACT
>chr7D_2355
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-------------------------------------------------------TCCTACATGTTGCCTTCGGAGCCAG
TGGCATTTG-CC-TTGGTGCCTTCGGAGCACGATGACAATTCGGAGTGGTTCATGGGGGCGGTAGCGGGTAATGGTATTC
TCCTTTGGGATCTATGACCTGGTCGAGCAAAAATCCCGCTATTTCCTCTTGAAGTGCTAGTATGCGCTCTGTTGGTAGGA
GCTGCTCCCGCACTTCTTTGAACTGTTAAGAAGGAAATCAATATGCATGTGTATTAGTTGTGTGACTAGATATCGATAAT
CATGTAAAAATTGTGAATAGTGTTCTGGCAAACGTACCCATTGCTGTCTATCAGATTTGCTTCTTTCGGACGCCATCATG
CGAATGTTCTCGCAAACGTAGTATGCACACAGTTCAGTCCCCGACGCCTGCTTCAGGGCCTTTAAGAGAATAGAATTTAA
TCAGATAATAATTAATCAAGCGTGA----TAATTAA----TGGTATTGAAACAAGAATTAAAGAGATG--GTAGCTAGCT
AGTACTACTTAATTACTTACCATGGGTCGAAACCAAAACAGCTTTTTTCGCCATTTCCCTGGAGTCACGTTGATGAACTT
TGCCCAAGCCCTGCCCGCCGGTAAAGAAAATGA--ATAAAGGGGTTATTAAATAGTTGATATCAGGAAATGACGAAC---
-TAAATAGGCCGAGATATAGTTAATAATGATTGAAATTACCTGTCGACTATCCCCTTCAAGATGGTGAAGTCACTTTCTT
TCTTAAGTAGTGAGTCCAGTAATTCAACTGTTCCTTCTTCAACT
>chr6D_2357
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---------------------------------------------------------CTACATGTTGCCTTCGGAGCCAG
TGGCATTTG-CC-TTGGTGCCTTCGGAGCACGATGACAATTGGGAGTGGTTCATGGGGGCGGTAGCGGGTAATAGTATTC
TCCTTTGGGATCTATGACGTGGTCGAGCAAAAATCCCGCTATTTCCTCTTGAAGTGCTCGTATGCGCTCCGTTGGTAGGA
GCTGCTCCCGCACCTCTTTGAACTGTTAAGAAGGAGATCAATATGCATGTGTATTAGTTGTGTGACTAGATATCGATAAT
GATGTAAAAATTGTGAATAGTGTTCTGGCAAACGTACCCATAGCTGTCTATCTGATTTGCACCTTTCGGACGCCATCATG
CGAATGTTCTCGCAAACATAGTATGCACACAGTTCAGTCCCCGGCGCCTGCTTCAGGGCCTTTACGAGAATGGAATTTAA
TCAGATAATAATTAATCAAGCATGATAATTAATTAA----TGGTATTGAAACAAGAATTAAAGAGATG--GTAGCTAGCT
AGTACTACTTAATTACTTACCTTGGGTCGAAACCAAAACAGCTTTTGTCGCCATTTGCCTGGAGTCACCTTGATGAACTT
TGCCCAAGCACTGCCCGCCGGCAAAGAAAATGA--ATAAAGCGGTTATTAAATAGTTGATATCAGAAAATGACGAAC---
-TAAATAGGCCGAGATATAGTTAATAATGATTGAAATTACATGTCGACTATCCCCTTCAAGATGGAGAAGTCACTTTCTT
TTTTAAGTAGTGAGTCCAGTACTTCAATTGTTCCTTCTTCAA--
>chr4D_2359
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-----------------------------------------------------------ACATGTTGCCTTCGGAGCAAG
TGGGATTAGCCC-TTGGTGCCTCCAGAGCACGATGACAATTGGAAGTGGTTCATGGGGGCGGTAGCGGGTAATAGTATTC
TCCGTTCGGATCTATGACCTGGTCGAGCAAAAATCCCGCTACTTCCTCTTGAAGTGCTCGTATGCGCTCCGTTGGTAGGA
GCTTCTCCCGCACCGAATTGAACTGTTAAGAAGGAGATCAATATGCATGTGTATTAGTTGTGTGACTAGATATCGATAAT
GATGTAAAAATTATGAATAGTATTCTGGCAAACGTACCCATAGCTGTCTATCAGATTTGCTCCTTTCGGGCGTCATCATG
CGAATGTTCTCGCAAACGTAGTATGCACACAGATCAGTCCCCGGCGCCTGCTTCAGGGCCTTTACGAGAATGGAATTTAA
TCAGATAATAATTATTCAAGCATGATAATTAAT--------GGTATTGAAATAAGAATTAAAGATATG--GTAGCTAGCT
AGTACTACTTAATTACTTACCTTGGGTCGAAACCAATACAGCTTTTTTTTCCATTGGCATGGAGTCACGTTGATGAACTT
TGCTCAAGCCCTGCCCACCAGCAAAGAAAATGA--ATAAAGGGGTTATTAAATAGTTGATATCAGGAAATGACGAACTAA
TTAAATAGGCCGAGATATAATTAATAATGATTGAAATTACCTGTTGACTATCCCATTCACGATGTCGAAGTCACTTTCTT
CCTGAAGTAGTGAGTCCAGTACTTCAACTGTTCCTTCATCAACT
>chr3D_2359
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-----------------------------------------------------------ACATGTTGCCTTTGGAGCAAG
TGGGATTAGCCC-TTGGTGCCTTCGAAGCACGATGACAATTGGAAGTGGCTCATGGGGGTGGTAGCGGGTAATAGTATTC
TCCGTTCAGATCTATGAACTGGTCGAGCAAAAATCCCGCTATTTCCTCTTAAAGTGCTCGTATGCGCTCCATTGGTAGGA
GCTTCTCCCGCACCGAATTGAACTGTTAAGAAGGATATCAATATGCATGTGTATTAGTTGTGTGACTAGATATCGATAAT
GATGTAAAAATTGTGAATAGTATTCTGGCAAACGTACCCATAGTTGTCTATCAGATTTGCTCCTTTCGGACGCCATCATG
CGAATGTTCTCGCAAATGTAGTATGCACACAGATCAGTCCCCGGCGCCTGCTTCAGGGCCTTTACGAGAATGGAATTTAA
TCAGATAATAATTATTAAAGCATGATAATTAAT--------GGTATGGAAACAAGAATTAAAGATATG--GTAGCTAGCT
AGTACTACTTAATTACTTACCTTGGGTCGAAACCAAAACAGCTTTTGTCGCCATTTGCCTGGAGTCACCTTAATGAACTT
TGCCCAAGCCCTGCCCGCCGACAAAGAAAATGA--ATAAAGGGGTTATTAAATAGTTGATATCAGGAAATTTTGAACTAA
TTAAATAGGCCGAGACATAGTTAATAATGATTGAAATTACCATTTGACTATCCCATTCACGATGGCGAAGTCACTTTCTT
CCTTTAGTAGTGAGTCCAGTACTTCAACTGTTCCTTCATCAACT
>SNPs
-SSSS-SSSS-SS-SSS-SS-SSS-S--------------------S------------------SS---------S--S
------------------------S------------SS---------SS-----------------S------------
----------S----------------S-----S---------S------------S-S----SS---------------
---------------------------------------S--------SSSSSS-SS-SSS-S-SS-SS-SSSS-SSSS-
S---------------------S------------S-----S--------------------------------------
------------S------------------------------S-S------S-------------SSSS-SSS-SSSSS
S-SS-SSSSSSS-SSSSS-S-S-S-SSSSSSSSS-SSSSSS-S-SSS-SS-S-SSSSSSSSSSSSSSSSS--S-SSSSSS
-S--SSSS-SSSSSS-S-S-SSS-SSSS---S-SS-SS-S-SSSSSS-SS--SS-S-SSSS--SS--SSS-SSSS-S-SS
S--SS--S-SS-SS--SSS--S-SSSSS-S--SSSSS-SSSSSS-SS--S---SS-SSSSSSSSSSS---SSSS-S-SSS
SS-SS-SSSSSS--------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-------------------S---------------------
---S------------S-----------------------------------------------S-------S-------
--------------------------------------------------------------------------------
------------------------S--------------------------S----------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------S----------------S-----
-------------------------------S-----------------------S------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------SSS-----------------------------
---------------S---------------------------------------------SS-SSSS-S----------
-----S-S---S-S-SSSSSSSSSSSS-------------SS--------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------S----SSSSS-SS-SSSSS--SSS
SSSSSSSSSSSSSSSSS------S--------------S-----------SSS--S-S----------------------
-------------------------S--------S--------S---S----------S-------------------SS
S-SSSSSSSSSSS-------------S-----------S------------------S----------------------
-----------------------------------S--------------------------------------------
----------------------S--S---------------S-------------------------------------S
SSS---S------------------S----S-------SS-------------------------S--S---------S-
------S----------S----S-------------S-------------------------------------------
------------------------------------------------------S-------------------------
-----------------S-----S-----------------------------------S--------------------
---------------S----------------------------------------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
--------------------------S--S--------------------------------------------------
--------------------------------------------------------------------------------
--S------------------------------------------S----------------------------------
---------------------------S----------------
>forward_2884
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----------------------------------------------------------------GAGTCCATCCCCTCCT
CCTT----------------------------------------------------------------------------
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>reverse_4780
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-----------------------------------------------------------ATATGCGCTCCGTTGGTAGG-
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--------------------------------------------
