>input_sequence_59824
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--------------------------------------ATGGTACGCCCTCCTCCCCACCCCGGCCCTTCGTTCTCGCGT
CGTTCTAGTGAATATCCGGCGTCGCC-------GTCGTTCCTCCTGCCGTGCCCCGCGGCTCCGGCCTCTGTCGCTAGGT
AGATAGATAAGAGAGATAGGG-------------------------------------------------------CTCC
CGAGCCGGGTCCGCCGGCTGGGCGAGAGTTACGGCGGGACAGCGACAGTGTGTGCGAACCTTCCTGCCGGTCCATCTG--
----------CCCAATTCGGGATGGGGTTTACTGTTCCGCCGTCGACGACGGCGACCGGGCCAGTACTTGCGGGGCTGCT
AGCGTGCCTA-------GTGGGTTGGTTGAATCGGGCCATCGCAGGGTCCCGGCGGCGAGCGTGGTCCGCTGGTCCGGAG
AGGCGGCAGCAGTCACCCACTGCAGCTGCCGTAAT-CCCCTGCACCACGCTGGTCCACACGAACAGTGCTAGACAACGA-
--CAGTCTTCCTCGCTGGGTTCGTGTA-TCTGACATGGATTTAGGAACTTGTGGTTGGACTAAATCATTTGGTTGGGTCC
AATTTGCAGTTATATCAAGATGAATTACTTCTTTATTATTGCTTGGGTC-----------------------------CA
ATTCGCAAGCCTACTCATGTCATGTTCAGAGTATGATTCTGAATTTTTAGCACTGTCATCGATCCAT------------C
TGGAACATTCTCTGGTACCACAGGCTACGCCGCTGGTAGCTGGGCTGTCGGTAGCTGCTGCTGCGATGGGGAGCAGATTC
ATGATTCAGGCATGGCAGGCCTTTCGAATCCGGGCTGCGATGCCACGTGTGCGTAAATTCTATCCTGGAGGATTTGAGAG
GGAGATGAGCAGAAGAGAAGCCGCATTGATCCTTGGCGTAAGGTGATGTTTCTTCTCCATCCTGTCCTTGTTAACCTGTA
TCTTGATAATAATGTCGCTGAAATCCTGTGCGACTGAA-ATGATGTACAGTTGGTTTTTGAGTTACATTGAGATGCTGAA
AATATGAAACTGTCGTTGTTTCAGAGAACGTGCTGCACTGGAC-----AAGATAAAGGAGGCCCACAAGAGGGTGATGGT
AGCCAACCACCCTGATGGTGGCGGCAGCCATTACATTGCTTCCAAGATAAACGAGGCCAAGGACATGCTCATGGGG----
---AAGGGGAAATCCGGCTCCATTTTTTAG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>chr5D_1_TraesCS5D01G420700
CCTGAAAAGAATCTTGGAAAATCCTATGGGACGTCCGCCTGAATCATATAGGTGCGCCAGAAACGCGAGGCAAGATGGGT
CGGCTCACTCGACACGTTTGCGCATTTTTGTGTTTTTTGTTTTTGTGTGTGTGGTTTTGCTCTTGGTTTT-TGTTTTGC-
----------TTTTGTTTGCTTTTAGATTTTG-GGTTTT-CTTTTATTTTCTTTCATTGTTTACATTTTCTTAATTTTTA
AGTTTTTTTTGTAATATAAGGTGAACACTTATTAATAATATAGTGGAAATGGTTCTAGTATATGATTAATATTTTTTTAT
TTTTTATATACATTATACTTTTTTAAAAAAATTATACGATTTATTTATA----ACACACACCAAACATTCATTGAATATA
GATTAAGCTTCTT----TATGTACACTGGACTTTTGCATAGCGTGTAACACATACAGATTTGTTTTTATAAAAATAATTT
TCAGAGGTTTTA----------AAAAATATGTAGCTTTTTTAGGTGAAAGGCCGACTAAAAACCGAAGAAGAAAAAGAGA
AACCCGTGTGACGGGCACAGTGGGCCGGCCCGTTTGAGTTGGCTTCCGGCGA--AGGCTCCCATATTTCTTGATGGCCTG
GTGGGCCTTCTCGAACGACCGGGGGCGCGCGTGTTCCAGCCTTCTCCGGAAGCGTCCCGCCGCGTGCCCTCCGCCGCCGC
CGCATATTCTTTTCTTCTTCTTCTTCTTCTTCCCCAAGATGAACCAACCGATTTCTCATCTTATAACGAAAAGAAAAAAA
AAG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------AAAAAAAAGAAGGAAACCGACCCCTCCTCCTTTTTCCACTCGATTCTTT
CTTGCTGCACAAGAAGAGCGCCGCCTCGCTCGCCTTAATCCGCAACCACCCCCCGCCCACAGAGGCAGCCAAACCTCGCC
CGCCCGCCGCCCGCAGCCTCCGCTCCCCTCGGTTCCGCAGATTCCC----CCGAGCTCGCCGACGGGACTGCTCCGGCCG
CCTCGCTCTCC--------C----GCCGCCGTTGCCCCATGGTACGCCCTCCTCCCCACCCCGGCCCTTCGTTCTCGCGT
CGTTCTAGTGAATATCCGGCGTCGCC-------GTCGTTCCTCCTGCCGTGCCCCGCGGCTCCGGCCTCTGTCGCTAGGT
AGATAGATAAGAGAGATAGGG-------------------------------------------------------CTCC
CGAGCCGGGTCCGCCGGCTGGGCGAGAGTTACGGCGGGACAGCGACAGTGTGTGCGAACCTTCCTGCCGGTCCATCTG--
----------CCCAATTCGGGATGGGGTTTACTGTTCCGCCGTCGACGACGGCGACCGGGCCAGTACTTGCGGGGCTGCT
AGCGTGCCTA-------GTGGGTTGGTTGAATCGGGCCATCGCAGGGTCCCGGCGGCGAGCGTGGTCCGCTGGTCCGGAG
AGGCGGCAGCAGTCACCCACTGCAGCTGCCGTAAT-CCCCTGCACCACGCTGGTCCACACGAACAGTGCTAGACAACGA-
--CAGTCTTCCTCGCTGGGTTCGTGTA-TCTGACATGGATTTAGGAACTTGTGGTTGGACTAAATCATTTGGTTGGGTCC
AATTTGCAGTTATATCAAGATGAATTACTTCTTTATTATTGCTTGGGTC-----------------------------CA
ATTCGCAAGCCTACTCATGTCATGTTCAGAGTATGATTCTGAATTTTTAGCACTGTCATCGATCCAT------------C
TGGAACATTCTCTGGTACCACAGGCTACGCCGCTGGTAGCTGGGCTGTCGGTAGCTGCTGCTGCGATGGGGAGCAGATTC
ATGATTCAGGCATGGCAGGCCTTTCGAATCCGGGCTGCGATGCCACGTGTGCGTAAATTCTATCCTGGAGGATTTGAGAG
GGAGATGAGCAGAAGAGAAGCCGCATTGATCCTTGGCGTAAGGTGATGTTTCTTCTCCATCCTGTCCTTGTTAACCTGTA
TCTTGATAATAATGTCGCTGAAATCCTGTGCGACTGAA-ATGATGTACAGTTGGTTTTTGAGTTACATTGAGATGCTGAA
AATATGAAACTGTCGTTGTTTCAGAGAACGTGCTGCACTGGAC-----AAGATAAAGGAGGCCCACAAGAGGGTGATGGT
AGCCAACCACCCTGATGGTGGCGGCAGCCATTACATTGCTTCCAAGATAAACGAGGCCAAGGACATGCTCATGGGG----
---AAGGGGAAATCCGGCTCCATTTTTTAGACAGTGGATACATACGAGATGGAAGTTATTTTGCATTGTTCGCGATGAGG
TAGTGATTCGCTTTCCATCGACATCATTAACAGTGTTGTGCTGATACCGTGCATCTGAACAAAGATACACCGTATGGAAA
CAGAGTAA-CTTGAG-ATGTGGCTGATGTAAGTTTACCCAGAGGCTCCAGATATTATGCTAACCGTCGTCTGTTGTGACC
ATTGGGCTGTCTTACTTGAAAGATTGTATATTTGGGGCTTGTTGCTTACTGATGTGTGTGTAAGATATCAGTTTGTTTCT
CATTGTTT---------AATGTCACTGCTGATAAAAGCATAAGCTGTTTACGATCA----------TATCGTTAGAAAAT
CCTTCA--TACATCTGCTTGATCTTATCTCTGTTGTAACAATTGTCCAGCCTTTCGTTTCTTCTATTCTAGGAAACTCCT
ATTAATTCATATAAAGGGCTATAAATCTCCCCCAA----------AACGTCCAAGTCAGCACACTGTGATGATTTATATT
GTTGCAGTGTCAAAGTTACCAATAAATGCATAGCATGGAGAGGAGCAGTGGACATTCTTTGTCGAAAAGTCTGCACTGAA
TCTCTTTGATGCACAATCCACATCAAACATTTAAGCTCCAGTTGAAAGCTTCATTGGAGATTTGCAGTGTTCTGTAAAAA
GAAGCATATATATTGTAAGCCTCGTTAGCTATTTGACCTCCCGTTCCAGTTCAGGCTATATCCTTTTTTT---GCGGAGT
TCAGGCTATATCTTAACAAAATGACCACTGTTTATCAAATATTCATCCACAGCGCGACTTGTAACAGTTAAATATATGCG
CTGTTTCACTACAGTATGTCAAACTAACTTATACTTCAATTAATCTATCAGCCCCTGTCCATGCAAATTGGAAACACAGA
TATTTTGTGCAAATATGAACTCTTGTCATCAGCCTGGCAGAAATAACTTTTGTGGATGCAGCAAGTTTGAAAATTTCAGT
GAACAATTCAATTACGTGGGCATCGA
>chr5B_4
---GAAAAGAATCTTGGAAAATCCTATGGGATGTCCACCTGAATCATATAGGTGCGCCAGAAACGCGAGGCAAGATGGGT
TGGCTCATTTGGCACGTTTGCGCTTT-------------TTTTTGTGTGTGTGGTTTTGCTCTTGGTTTTCTGTTTCGTT
TTTGTATTTGTTTTGTTTGCTTTTTCAGATTTTGGTTTT-CTTTTATTTTCTTTCATCGTTTAAATTTTCTTAAA-TTTT
AGGTCTTTTTTAAATATATGGTGAACATTTATTACTAATATAGTGGAAATGTTTCTAGTATATGATTAATATTTTTTA--
TTTTTATATACAATATAA---TTTAAAAAAATTATATGATTTACATTTTTATGACACACACCGAACATTCATTGAATATA
GATTAAGCTTCTT----TATGTACACTGGACTTTTGTATAGTATGTAACACATACTGA-TTTTTTTCCTAAGAATACTTT
TCATAGGTTTAATGTAGCTCCTAAAAATATGTAGCTTTTTTAGGTGAAAGGCCGACTAAAAACGGAAGAAGAAAAAGAGA
AACCCGTGTGACGGGCAGAGTGGGCCGGCCCGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAGAGAAGGAAACCGACCCCTCCTCCTTTTTCCACTCGATTCTTT
CTTGCTGCACAAGAAGAGCGCCGCCTCGCTCGCCTTAATCCGCAACCACCCCC-GCCCACAGAGGCACCCAAACCTCGCG
CGCCCGCAGCC-------TCCTC-CCCCTCGGTTCCGCAGAATCGGG----CGAGCTCGCCGACGGGACTGCTCCGGCCG
CCTCGCTCACTCGCTCGCTC----GCCGCCGTCGCGCCATGGTACGCCCTCCTCCCCACCCCGGCCCTTCGTTCTCGCGT
CGTTCTACCGAAGATCCGGCGTCGCTGTA-------GTTCCTCCTGCCGTGCCCCGCGGCTCCGG--------------T
AGATAGATAG-AGGGATAGAGGCAGCAGCTAGCGGTC----------------GAGTACAATCCAAGGCGAGGTCCCTCC
CGGGTCGGGTCCGCCGGCTGTTTGAGAGTTACGGCGGAACAGCGACAGTATCTGGTAAACGTC------------CTG--
----------CCCAATTCGGGATCGGGTCTCCTGTTCCGCCGTCGACGACGGCGACCGGGTCGCTACTGGCGGGGCTGCT
AGCGTGCCCAGTG-CTAGCGGGTTGGTTGAATCGGGCCATCCCAGGGTCCCGGCGGCCAGCGTGGTCCGCTGGTCCGGAG
AGGCGGCAGCAGTCGCTCACTGCAGCAGCCGTGACCCCCCTTAGCCGCGCTGGTCCAGACGAACAGTGCCAGACAACGAT
AGCAGTCTGCCTGGCTGGGTTCGTGTA-CCTGACATGGATTTAGGAACCTGTGGTTGAACTGAATCATTTGGTTGGGTAC
AATTTGCAGTTATATGAAGATGAATTTCTCCTTTATTATTGTGTGTATATATGTTGAATGCATAACTGAACCTGCACATA
ATTCAGAAACTTAGCCATGTCATGTTGAGAGTATGATTCTGAATTT-TAGCTCTGTCATCGATCGGTCTAATCAGTGTGC
TGGAACATTCTCTGGTACCACAGGCCACGCCGCTGGTAGCTGGGCTGTCGGTAGCTGCTGCTGCGATGGGAAGCAGATTC
ATGATTCAGGCATGGCAGGCCTTTCGAATCCGGGCGGCGATGCCACGTGTGCGTAAATTCTATCCTGGCGGATTTGAGAG
GGAGATGAGCAGAAGAGAAGCCGCACTGATCCTTGGCGTAAGGTGATGTTTCTTCTTCATCATGTCCTTGTTAACCTGTA
TATTGATAA---TGTCGCTGAAATCCTGTGCGACTGAA-ATGATGTACAGTTGTTTTTTGAGTTACATTGAGATGCTGAA
AATATGAAACTGTCGTTTCTTCAGAGAACGTGCTGCACTGGAC-----AAGATAAAGGAGGCCCACAAGAGGGTAATGGT
AGCCAACCACCCTGATGGTGGTGGCAGCCATTACATTGCTTCCAAGATAAACGAGGCCAAGGACATGCTCATGGGG----
---AAGGGGAAATCCGGCTCCATTTTTTAGCCAG----TGTATACGAGATGGAAGTTATTTTGGATTGATCATGATGAGG
TAGTGATTTGCTTTCCATTGGCATCATTAACATTGTTGTGCTGACACCGTGCATCTGAACAAAGGTACACGTTATGGAAA
CCGAGTGA-CTTAATTATGTGGCTGATGTAAGTTTACCCAGAGGCTTCAGTTATTATGCTAACCT---TCTGTTGTGACC
ATTGGGCTGTCTTGCTCGAAAGATTGTACATTTGGGGCTTATTGCTTACTGATATGCGTGTGTGCTATCAGTTTGTTTCT
CATTGTTTCCATTGTTTAATGTCATCGTTGATAAGAACATAAACTGTTCACGATCGAATT----------GTCAGAAGAT
GTGTCA--TACATCAGGTTGATCTTATCTCTATTGTAACAATTCTTCGGCCTTCTGTTTCTTCT----TGGGAAGCTCCT
ATTAATTCATATAAAGGGCCATAAAGCTCCCCCAA----------AATGTCCAATTCAGCACACAGTGATGATTTATATT
GTTGCAGTGTCAAAGCTACCAATAAATGCATAGCATGGAGAGGAGCAGTGGACATTCTTTGTCGACAAGTCTGCACTGAA
TCTCTTTGCTGCACAATCCACATCAAACATTTAAGCTCCAGTTGAAAGCTTCATTGGAGATTTGCAGTGTTCTGTAAAAA
GAAGCATATATATTGTAAGCCTCACTA-------GACTTCCCGTTCCAGTTCAGGCTATATCCTTTTTTCTAGGCGGAGT
TCAGGCTATATCTTACCAAAATGACAACTGTTTGTCAAATAT--ATCCACAGCGCGACTTGTAACAGTTAAATAT--GCG
CTGTTTCACTACAGCATGTCAAACTAACTTATACTTCATTTAATCTATCAGCCCCTGTTCATGCAAATCGAAAACACAGA
TGTTTTGTTCCAAAAAGAACTCTTGTCATCAGCCTGGCAGAAATAACTTCTGTG--------------------------
--------------------------
>chr5A_22
---------------------TCCTATGGGACGTCCGCCTGAATCATATAGGTGCGCCAGAAACGTGAGGCAAGATGGGT
CGGCTCACTCGGCACGTTTGCGCATTTTTGT-TTTTTTGTTTTTGTGTGTGTGGTTTTGCTCTTGGTTTTCTGTTTTGT-
----------TTTTGTTTGCTTTTTGAGATTCTGGGTTTTCTTTTATTTTTTTTCATTGTTTACATTTTATTGAT-TTTT
AAGT-TTTTTGTAATATATGGTGAACATTTAATAATAATATAGCAGAAATATTTCTAGTATATGATTAATATTTT---AT
TTTTTATATACAATAGATC--TTTTTAAAAATTATACGATTTATTTATA----ACACACACCAAACATTCATTGAATATA
GATTAAGCTTCTTTATTTATGTACACTGGACTTTTGTATAGTATGTAACACATACTGATTG--TTTTATAAAACTACTTT
TCAGAGGTTGTA----------TAAAACCGAAGAA------------------------------------AAAAAGAGA
AACCCGTGTGACGGGCAGAGCGGGCCGGCCCGTTTGAGTCGGCTTTCCGCAATGAGGCTCCCCTATTTCTTGATGTCCTC
GTGGGCCTTCTCGAACGACCGGGGGCGTGCGTGTTCCGGACTTCTAAGGAAGCATATNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CAAGAAGAGCG----------CGCCTTAATCCGCAACGAA-CCC-GCCCACAGAGGCACCCAAACCCCGCC
CG-----------CCGCCTCCGC-CCCCTCGGTTCCGCAGATTCCCTCCCCCGAGCTCGTCGGCGGAGCTGCTCCGGCCG
CCTCG--------CTCGCTC----GCCGCCGTTGCGCCATGGTACGCCCTCCTCCCCGCCCCGGCCCTTCGTTCTCGCGT
CGTTCCAGTGAAGATCCGGCGTCGCTGTCCTGTGTCGTTCCTCCTGCCGTGCCCCGCGGCTCCGGCCTCTGTCGCTAGGT
AGATAGATAAGAGAGATAT---------------------------------------------------AGGCCCCTCC
CGAGCCGGGTCCGGCGGCTGGGCGAGAGTTACGGCGGGACAGCGACAGTGCCTGGGAAACTTC------------CTGCG
TGTCAGTCCCCCCAATTCGGGATGGGGTTTCCTGTTCCGCCGTCGGCGACGGCGACCGGGCCGGTACTGGCGGGGCTGCT
AGCGTGCCTG-------GTGGGTTGCTTGAATCGGGCCATCGCAGGGTCCCGGCGGCGAGCGTGGTCCGCTGGTCCGGAG
AGGCGGCAGCAGTCGCTCACTGCAGCTGCCGTAAT-CCCCTGCACCACGCTGGTCCAGACGAACAGTGCTGGACAACGAT
TGCAGTCTGCCTGGCTGGGTTCGTGTA-CCTGGCATGGATTTAGGAATTTGTGGTTGAACTAAATCATTTGGTTGGGTCC
AATTTGCAGTTATATCAGGATGAATTTCTTCTCTATTATTGTGTAGTATCTGTTGGAATGCATAACTGAACCTGAACGCA
ATTCACAAGCCTACTCATGTGATGTTCAGAGTATGATTCTGATTTTTTAGCTCTGTCATCGATCGATCTAATCAGTGTGC
TGGAACATTCTCTGGTACCACAGGCTACGCCGCTGGTAGCTGGGCTGTCGGTAGCTGCTGCTGCCATGGGAAGCAGATTC
ATGATTCAGGCATGGCAGGCCTTTCGAATCCGGGCGGCGATGCCACGTGTGCGTAAATTCTATCCTGGCGGATTTGAGAG
GGAGATGAGCAGAAGAGAAGCGGCACTGATCCTTGGCGTAAGGTGATGTTTCTTCTCCAGCCTGTCCTTGTTAACCTGTA
TCTTGATAA---TGTCGCTGAAATCCTGTGCGACTGAA-ATGATGTACAGTTGTTTTTTGAGTTACATTGAGATGCTGAA
AATATGAAACTGTCATTG-TTCAGAGAACGTGCTGCACTGGAC-----AAGATAAAGGAGGCCCACAAGAGGGTGATGGT
AGCCAACCACCCTGATGGTGGCGGCAGCCATTACATTGCTTCCAAGATAAACGAGGCCAAGGACATGCTCATGGGG----
---AAGGGCAAATCCGGGTCCATTTTTTAGCCAG----TGCATACGAGATGGAGGTTATTTTGCATTGTTCGCGATGAGG
TAGTGATTCGCTTTCCGTTGACATCATTAACAGTGTTGTGCTGATACCGTGCATCTGAACAAAGATGCACGTTATGGAAA
CAGAGTAA-CTTGATTATGTGGCTGATGTAAGTTTACCCAGCGGCTCCAGATATTATGCTAACCT---TCTGTTGTGACC
ATTGGGCTGTCTTACTTGAAAGATTGTATATTTGGGGCTTGTTGCTTACTGATGTGTGTATATTCTATCAGTTTGTTTCT
CATTGTTT---------AATGTCATTGCTGATAAAAGCATAAACTGTTTATGATCA----------TATCGTCAGTAAAT
GTTTCA--TGCATCAGGTTGATCTTATCTCTGTTGTAACAACTGTCCAGCTTTTTGTTTCTTCTATTCTAGGAAGCTCCT
AGTAATTCATAAAAGACCACAGCACCCCACCCCGA----------AATGTCCAATTCAGCACACAGTGATGAA-TATATT
GTTGCACTGTCAAAGCTACCAATAAATGCATAGCATGGAGAGGAGCAGTGGACATTCTTTGTCGAAAAGTCTGCACTGAA
TCTCTTTGATGCACAATCCACATCAAACATTTAAGCTCCAGTTGAAAGCTTCATTGGAGATTTGCAGTGTTCTGTAAAAA
GAAGCATAGATATTGT----------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------
>chr6D_789
--------------------------------------------------------------------------------
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--------------------------------------------------ACCCGTCCTCCTTTTTCCACTCGATTCTTT
CTTGCTGCACAAGAAGAGCGCCGCCTC---------AATCCGCAACCACCCCC-GCCCACAGAGGCAGCCAAACCTCGCC
CA-----------CAGCCTCCGCTCTCCTCGGTTCCGCAGATTCCC----CTGAGCTCGTCGGCAGTGCTGCTCCGGCCA
CCTCG--------CTCGCTCGCTCGCCGCCGTTGCACCATGATACGCCCACCTCCCCACCCCGTCCCTCCGTTCTCGCGA
CGTTCCAGGGAAGATCCGGCGTCGCTGTA-------GCTCCTTCTACCGTGCCCCGCTACGTCGGTCTCTGTCGCTAGGT
AGATGGGTGT-AGAGATAGGGGCAGCGGTGGTCGCGTGATTCTCCGTCTCCTTGAGTACAATCCAAGGCGAGGTCACTCC
TGAGCCGGGCCCGCTGGCTGTTTGAAAGTTACGGCGGAACAACGACAGTATCTGGTAAACCTC------------CTGAA
------------CAATTCGGGATGGGGTCTCCTGTTCCGCCGTCGACGACGACGACCGGGTCGCTACTGGCGGGGCTGCT
AGCGTGCCTAGTGCCTAGTGGGTTGGTTGAATCGGGCCATCACAGGGTCCCGGCGGCCAGCGTGGTCCGCTGGTCCAGAG
AGGCGGCAGCAGTCGCTCACTTCAGCTGCCGTAAT-CCCCTACGCCGCGCTGGTCCACATGAACAGTGCTAGACAATGAT
AGCAGGCTGCCTGGCTGGGTTCGTGTAACCTGACATGG------------------------------------------
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--------------------------
>chr5D_1769
--------------------------------------------------------------------------------
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-----------------------------------------------------TAATTTTTATCCCAGCGGTTTTGAGAG
AGAAATGAGCAGAAGAGAAGCGGCATTGATCCTTGGCGTAAGGTGATATTTCTTCTCCATCCTGTCCTTATTAACCTGTA
TCTTGATAA---TGTCGCTGAAATCCTGTGCAACTGAACATGATGTACAGTTGTTTTTTGAGTTACATTGAGATGCTGA-
AATAGGGAACTGTCATTG-TTAACTAGAGGTATCCCCCTGTTGTGCTGAATATGAAGGAGGCCCACAAGGGGGTAATGGT
AGCCAACCACCCTGATGGTGGCGG--------------------------------------------------------
------------------TCCCTTTTTTAGCTAG----TGCATATGAGATGGAAGTTAGTTTGCATTGTTAGTGATTAGG
TAGTGATTCGTTTTCCATTGACATTATTAACATTGTTGTGCTGATACCATACATCTGAACAAAGACGCAAGTTGTGGAAA
CCGAGTAA-C----------------------------------------------------------------------
-------------------------------TTGGGGCTTGTTGCTTACTGATTGATTTGTATGCATGCTAAAA------
----GTTT---------GTTATGCCAACTAGTAAAAGCATAATTTTTGTAAGACAAAGAATGGTTGTAGCATCAGAATAT
GTTTCAGCTACACCAGTTTGATATTATCTCTGTAGGAA---TTGTTCAACCATTTGTTTC-----TTCTGGAACGCTCGT
AATAATTCATAAAAGACCAGA-AAGGCTCCCCCAGATTACTGGGGAACGTCCAATTCAC---A-----------------
----CAGTGTCAAAGCTACCATTGAATGCATAGCATGGAGAGGAGCAGTGGGCATTCTTTGTCGAAAAGTCTGCACTGAA
TCTCTTTGCTGCACAATCCACATCAAAG-TTTAAGCTCCAGTTGAAGT-TTCATTGGAGA-TTGCACTGTTCTTGAAAAA
GAATCATAGATAGTGTAAGCCTCATTAACTATTTGACTTCCTGTTCCAGTT-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>chr5A_1834
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------TAAGGTGATATTTCTTCTCCGTCATGTTTTTATTAACCTGTA
TCTTGATAA---TGTAGCTGAAATCATGTGCAACTGAA-ATGATGTATAGTTGTTTTTTGAGTTACATTGAGATGCTGAA
AATAGGGAACTGTCATTG-TTAACTACAGGCATCCCCCTGTTGTGCTTAAGATAAAGGAGGCCCACGAGGGGGTAATTGT
AGCCAACCACCCTGATGGTGGCGGCAGCTATCACATCACTTCCAAGATAAACGAGACCAAGTACATGCTCATGGCTCATG
GGAAAGGGAAAATACTAGTCCATTTTTTAGCTAG----TGCATATGAGATGGAAGTTATTTTGCATTGTTAGTGATGAGG
TAGTGATTCGCTTTTCATTGACATTATTAACATTGTTGTGCTGATACCATACATCTGAACAAAGATGCAACTTGTGGAAA
CCGAGTAAAC----------------------------------------------------------------------
-------------------------------TTCGGGCTTGTTGCTTACCAATTGATCTGTATGCATGCTAAAA------
----GTTT---------GTTATGCCAGCTAGTAAAAGCATAATTTTTTTAAGGCAAAGAATGCTTGTAGCATCAGAATAT
G-TTCAGCTACACCAGGTTGATATTATCTCTGTAGGAA---TTGTCCAGGCATTTGTTTC-----TTCTAGAAAGCTCCT
AATAATTCATAAAAGACCAGA-AAGGCTCCCCCAGATTACTGGGGAGTGTCCAATTCAATAGA-----------------
----CAGTGTCAAAGTTACCATTAAATGCATACCATGGAG-GGAGTAGTGGACATTCTTTGTCGAAAAGTCTGCACTGAA
TCTCTTTGCTGCACAATCCACATCAAACATTTAAGCTCCAGTTGAA-----CATTGGAGA-TTGCAGTGTTCTGTAAAAA
GAAGCAT-------GTAAGCCTCATTAACTATTTCATTTCCCATTCCAGTT-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>SNPs
SSS-----------------------------------------------------------------------------
-----------S-------------------S----------------------------------------------S-
------------------------S--SS--S-------------------------------------------S---S
--S-S-------------S--------S-----------------------S-------------------------S--
------------S----SSSS-----------------------------------------------------------
------------------------------------S----SS------------S-----S--------------S---
---------------------------------------------------------------S----------------
-----------------S---------------------S-----S-S--S-----------S------------S---S
---------------------------S---------S-S-----SS------S-SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
-----------------------------------------------------S--------------------------
-------S---SS-------------------------------------------------------------------
--------S-S------------------------S--------------------------------------------
------------S------------S------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S--S---S----SSSSSSSSSSSS-----
------------------------------S-------------------------------S-----S-----------
--------------------------------------------------------------------------------
--------------S-S---------------------------------------------------------------
--------S---S---------------S----------------------------S----------------------
--------------------------S--------------SS---S-S-------------------------------
----S----------------------------------------------S------------S---------------
----------------------------------------------------------------------S---------
-----------------------------------S--------------------------------S-----------
--------------------------------------------------------------------------------
---------SSS-----------------------------------------S--------------------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S---SSSS-S----------------------------------------
------------------S----------------------------------------------------S--------
--------------S-------------------------------------------------SSSS------------
--------------------------------------------------------------S-S---------------
------------------------------------------S-----------------------------S-------
SS------------S-S-------------------------------------S-------------------S-----
-------------------S-----S----------------------------S---------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S---S---------S-------------------------------S----------
---------------S---------S-------S--------SS-------------------------------SS---
--------------S-----------------------S-------------------S---------S-S---------
-S------S-S--S-S---------------------------------S----SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_770
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TCCCCAAGATGAACCAACCG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>reverse_2042
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CTTGGGTCCAATTCGCAAGC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>forward_771
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------CCCCAAGATGAACCAACCGA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>reverse_3146
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TCTCCCCCAAAACGTCCAAG-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
