>input_sequence_59777
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---------------------------------------------------------------ATGGGATTCCTCCACAA
AACCTCCAAGCAGACAGCGAAGCTCAAGTCCCTCCTGGGGCTCGCCGTCTCCCGCATCGCCGTCGCCCGCCAGCCGCGCC
TTGCTCGCAGGTCCATCGCCTGCAGCGATGTCAGCCAGCTCCTCGTCCTCGGCCACCTTGACCGCGCCCTCCACCGCGTG
CGTACCGACGACATGAAGCGAGACGTGGTGGTACCCTTCGATGCAGCCATACTGATGCTGGTGTTTCTGCGCGCAGGCAG
AGCAGGTTATCCAGGAGGACAACATGCTGGAGGCGTTCGGCATCATAGAGCTCTACTGCAAGCGCCTCATCGAGCAGGCT
GAGCAGTTAGACAAGCCGGAGTATGT---CTGCCTGCCTCATCACGCCTGTTCTCATCTTTGGTTCTCTATGTCCATTGG
ACAATAAACATTGCTATTCTGTTTGGGCCGTAGGGAGTGCGGCGAGGAGCTACGGGAAGCGGCGGCCAGCATCATGTTCG
CCGCCGGGTGGTGCGGCGACCTGCAGGAGCTGCTGTTTGCCCGTACCATCCTCGCAGACAAGTTCGGCGGCGACTTTGCT
GTCGCGGCCAAGGAGGGCACCGGCATCGTCGATCCCATCGTAAGAACTCCTATAGTACATTTGATCATTT-CTAGCGGGT
CTCATTGATTCACAGTGGAAAAAGGAAAGAGGAACTGCGGGCGGGGAGTTCACATGCGTTGTTTGTGTTGCCATTGCAGT
TGGTCTGGAAGCTGTCCGGAAACACAACGAGCATGGAACTGAAGAAGAAATTGACAAAAGAGATCGCCGCCGAGAACAAC
ATCTTGGTGGACTTCTCTGAGCTTCCAGAAGCAACGGAGGATGGCAGTGATATCTTGTTGGATTTCTGTCGGCTCCAAGA
AGCAACTGACGAAGGCAACAACAATGTTCCAGACAGTCAGGAGCTCCTCGGCCAAATGTCATGCCAGGACGACATGGATG
AAGGTTCAGAGTCGGACAATGAACATCCTCGCTCACACGGAACAAACACACCCGGGCTGGAGAGCGACGAGAATGTGCAC
ATCGTTACCAATTCTGACGGATCAGATGATGAGG---TTACAGGCCGGCGTAACCGAAGGTGGTGGCGCCTTGGGTGCGC
ATGA----------------------------------------------------------------------------
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>chr4B_1_TraesCS4B01G219400
CTTAGGTTAGACCCATGCCTGAACCCGTCGGGTCGCCCGACCC-AATTGGGCATTCATCGGGTGAGTGCAATAAAAAACC
T-TTTTTGTATCGTTTGTTCCGAAGCAAGCCACGCAGACAACATGACTCCCCTCCTCTTCCCCTGTGGTTGTCTTATATA
GGTGT--CCAACCCTTCGTTTTCTACTCCCACAAGCGAGGTGGTACTA--TCGATCAACACTACTGCAATACTGCACTGG
AATGGGTGAGCCAGAGTCAAGTGGAACATGGCCCAAGTGCTTTTAGCTTTGCGCGGGCAAAACCATGGGCCGGCCGCTTC
TCATTTTTGAGGGATGGGCCAGGTCCTTCTCTC---CTTGTGCATGAGCCTCACGCACCTA---TTCTTCTTCTTCTTCG
GTTGGCAATTATTTTTCTCGTGTGTTCTGTGTTACGTGCTTGGCCCATGCATGTATAGATCCATGCATTCATCCTACATT
TTTTTCTATGTTTCTCTATGTGCCTCGTGCATACATGTTAAATAATTAGTTAATAATTACATAATTTCACCGAGTCACAT
AGATGTCACAT---------------------------------------------------------------------
---------------TACCCATGGGCGCACATGAAGACCCATACCCTACCCATTCAGGTCGGGTGCCCATGGGCGTGCCT
ACCCATGGGTCGAATTGCCGGGTTGACTCCTAAGGGTAACCAACGAGGATCTCATTTGCTCGCAATATTTTAAAAACATT
TGTAGCATTAGCGAAAGACATATAAATTGGATGTCATGGCATGTTAAATCCTACAAGGATTGGAAACACATGAGCCTACA
AATTCTTGTCCCTCCAAGGCGGACTTCAGCATGAGTCCACCCACAAGCAACCCATCTGATCATATCCCTCCTC--CTCTC
CACGCAAAGGACCAGCAATGCAACCAAGATCAGCATCCAAACGCCGTCTGCTCTAGGCAAATAGCAATACAACCG----A
ATATAACAGAAGAGCAAAGCCAACACCCACCGCCGGGCCAACGTGC-AAAGCATCGTCCGGCCATGGGATTCCTCCACAA
AACCTCCAAGCAGACAGCGAAGCTCAAGTCCCTCCTGGGGCTCGCCGTCTCCCGCATCGCCGTCGCCCGCCAGCCGCGCC
TTGCTCGCAGGTCCATCGCCTGCAGCGATGTCAGCCAGCTCCTCGTCCTCGGCCACCTTGACCGCGCCCTCCACCGCGTG
CGTACCGACGACATGAAGCGAGACGTGGTGGTACCCTTCGATGCAGCCATACTGATGCTGGTGTTTCTGCGCGCAGGCAG
AGCAGGTTATCCAGGAGGACAACATGCTGGAGGCGTTCGGCATCATAGAGCTCTACTGCAAGCGCCTCATCGAGCAGGCT
GAGCAGTTAGACAAGCCGGAGTATGT---CTGCCTGCCTCATCACGCCTGTTCTCATCTTTGGTTCTCTATGTCCATTGG
ACAATAAACATTGCTATTCTGTTTGGGCCGTAGGGAGTGCGGCGAGGAGCTACGGGAAGCGGCGGCCAGCATCATGTTCG
CCGCCGGGTGGTGCGGCGACCTGCAGGAGCTGCTGTTTGCCCGTACCATCCTCGCAGACAAGTTCGGCGGCGACTTTGCT
GTCGCGGCCAAGGAGGGCACCGGCATCGTCGATCCCATCGTAAGAACTCCTATAGTACATTTGATCATTT-CTAGCGGGT
CTCATTGATTCACAGTGGAAAAAGGAAAGAGGAACTGCGGGCGGGGAGTTCACATGCGTTGTTTGTGTTGCCATTGCAGT
TGGTCTGGAAGCTGTCCGGAAACACAACGAGCATGGAACTGAAGAAGAAATTGACAAAAGAGATCGCCGCCGAGAACAAC
ATCTTGGTGGACTTCTCTGAGCTTCCAGAAGCAACGGAGGATGGCAGTGATATCTTGTTGGATTTCTGTCGGCTCCAAGA
AGCAACTGACGAAGGCAACAACAATGTTCCAGACAGTCAGGAGCTCCTCGGCCAAATGTCATGCCAGGACGACATGGATG
AAGGTTCAGAGTCGGACAATGAACATCCTCGCTCACACGGAACAAACACACCCGGGCTGGAGAGCGACGAGAATGTGCAC
ATCGTTACCAATTCTGACGGATCAGATGATGAGG---TTACAGGCCGGCGTAACCGAAGGTGGTGGCGCCTTGGGTGCGC
ATGAGAACTGAGATGGTGA----CCTCTGCATCCGGCTAAAAATGTAACGATATGGGCAGGACA--AATGCCATTTGTCC
ATGTGCACCCACCAAATTGTGAATAGACATGAATACACACATGGGTACTTTTAAACTATCTG------------------
---CTAGTCCAGTCAATTGTACTATCGTCTAAAAAGAAATG-TAAATCAGCTGTATCTCATGGCCGA-CCCTAGTGGCCA
ATGCTACAATAAAACCACATTGCTTAACAGTCATGGACCTCATGGTCACCTGTCCGTTGCTTGGTCATCGCCGTTCATCA
CCTTGATTTGATGATGTTGCTTTA-AGTAACCACCATACCACTACGTTATCCAACCTATCCTTAATGTTATGCTGTGCAA
GTATTTTTGTAA----------------------------------------------------------------ACAT
TATGTGGACCAGGTATAATTGCTAGCAAACCAACAA--ATATTTACTCGACAAGATCAGTACAAAAAGCAAAGATGGTC-
--------------------------AAACCTGGCCCAACAAAAATGCACAGGGGCGAAAATATGGAAGGGGAAATAAGC
CAGTAAAAGGTGCGCTGCAAAGATCATGGCAAGAAAAAGCCCTGCAAGGCCCGCATTTGGATTTTCTTGTGGGTGATTTT
GGATTTTCTTGCTACC-AAAAGAGCTGATCAGTTACCAGCGTGAATACTGATATTTGGTCAGTTCGGTAGCTGATGTGCA
AATGCAAATCAAAATCAAATTTGTCGGCATACACAATTGTATACAACAACAGGGCAACATACGATAGATTGATATTCATA
CCACTATTCACAGAAGTTTCTGTACAAGTATAGAACCTGT-------------AAAGAGCAAACTATTCATGGAATGACA
TTTGTGGAGAACACAATGGTGACGATAACCGTAGAAAACTAATATTTCCAAGCTCTCACTGCAGTCTAAGGCCTCAAGTC
AAATCCCTTTTTGTATCCAAAAAATAGATGAACAGTCATGGTTAACAGAGTTTGCTTTTGCACTCCTTTGATGCAAATAC
GACTTTCAGTCTTTTGAGTAT
>chr6A_1
CTTTGGTTAGACCCATGCCCGAACCCATTGGGTAGCTCGA-CC-AATTGGGCACCCATCGGGTGAGTGCAATAAAT-ACC
TATTTTTGCATTGTTTGTTCTGAAGGAAGCCACGCAGACGACGTGACTCCCCTCCTCCTCCCCTGTGGTTGTCTTATATA
GGCGT--CCAACCCTTCGTTTTCTACTCCCACGAGTGAGGTGGTACTATT--GATCAGCACTACTGCTATACTGCACTGG
AATGGGTGAGCCGGAGTCAAGTGGAACGTGGCCCAAGTGCTTTTAGCTTGCA-CGGGCAAAACCATGGGCCGGGTGCTTC
TCATTTTTTAGGGATGGGCCAGGTCCTTCTCTC---CTTGTGCATGAGCCTCACGCATGTAATCTTCTTCTTCTTATTCG
GTTGGCAATTATTTTTCTCGTGTGTTCTGTGTTACGTGCTTGGCCCATGCATGTATAGATCCATGCATTCATCCTACATT
TTTTCCTTTGTTTCTCTATGTGCCTTGTGCATACATGTTAAATAATTAGTTAATAATTACATAATTTCACCGAGTCACAT
AGATGTCACATTAATCGGGTAGCCCATCGGGTAACCCATGGGTATAGGCTTGTACCCATACCCTACCCACCATTATTCGG
TTTGCCCATGGGTCATACCCATGGGCGCACATGAAGACCCATACCCTACCCATCCGGGTCGGGTGCCCATGGGCGCGCCT
ACCCATGGGTCGAATTACCAGGTTG-------------------------------------------------------
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>chr1A_1
CTTAGGTTA-ACCCGTGCCCGAACCCGTCGGGTCGCCCGA-CCGAATTGGAAACCCATCGGGTCGGTGCAATAAAAAACC
TCTTTCTGTATTGTCTGTTTCGACAGAAGGCATGCAGACAACATGTCGACCCTCCTCCTCCGCTGTGGTTGTCTTATATA
TAAGCACCCAACCCTTCCTTTTCTACTACCACAAGCGAGGTGGGACTATCTCGATCAGAACTACTGCAATATTGCACTGG
AATGGGTGAGCCAGAGTCAAGTGAAACATGGCCCAAGTGCTTTTAGCTTGCA-CGGGC-AAACCATGGGCCGGGTGCTTC
TCTTTTTTCAGGGATGGCCCAGGTCTTTCTCTCTTACTTGTGCATGAGCCTCGCGCAAGTATTC----------------
-----------TTTTTCTCATGTGTTTTGTGTTAGGTGCTTGGCC------TGTATAGATCCATGCATTCACCCTACATT
CTCTCCTCTATT--TCTCTGTGCCTTGTGCATACATACTAAATAATTAGTTAATAATTACATAATTTCACCAGGTCATAT
ACATGTCACATTA-------------------------------------------------------------------
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>chr4A_651
CTCG----------------------------------------------------------------------------
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------------------------------TAAGGGTAACCAGCGAGGGTCCCATTTGCCCGCAATATTTTAAAAACATT
TGTAGCATCAGCGAAGGACATATAAATTGGATGTCATGGCATGTTAAATCTTACAAGGATTGAAAACACAAGAGCCTACA
AATTCTTGTCCCTCCAAGGCGGACTTCAGCATGAGT----CCACAAGCAACCCATCTGATCATCTCCCTCCTCTCCTCTC
CACGCAAAGGATCAGCAACGCAACCAAGATCAGCATCCAAACGCCGTTTGCTCTAGGCAATTAGCAATCCACCGAATATA
ACATAACAGAATAGCAAAGCCAGCACCCACCGCCGGGCCAACGTGC-AAAGCATCGTCCGGCCATGGGATTCCTCCAGAA
GACCTCCAAGCAGACGGCGAAGCTCAAGTCCCTCCTCGGGCTCGCCGTCTCCCGCATCGCCGTCGCCCGCCGGCCGCGCC
TTGCTCGCAAGTCCATCGCCTGCAGCGATGCCAGCCAGCTCCTCGTCCTCGGCCACCTCGACCGCGCCCTCCACCGCGTG
CATACCGACGACACGAAGCAAGACGTGGTGGTGCCCTTGGATGCAGGCTTACTGATGCTGGTGTTTCTGCGCGCAGGCGG
AGCAGGTTATCCAGGAGGACAACATGCTGGAGGCGTTCGGCATCATAGAGCTCTACTGCAAGCGCCTCATCGAGCAGGCT
GAGCAGATAGACAAGCCACAGTATGTTGCCTGCCTGCCTCATCACGCCTGTTCTCATCTTTGGTTCTCTATGTTCGTTGG
ACAACAAACATTGCTATTCTGTTTGGGCTGCAGGGAGTGCGGCGAGGAGCTGAGGGAAGCGGCGGCCAGCATCATGTTCG
CCGCCGGGTGGTGCGGCGACCTGCAGGAGCTGCTGTTTGCCCGTACCATCCTCGCAGACAAGTTCGGCGGCGACTTTGCT
GTCGCGGCCAAGGAGGGCACCGGCATCGTCGACCCCATCGTAAGAACTCTTA--GTACATTTGATCATTTTCTAGCGGGT
GTCATTGATCCGCAGTGTAAAATGGACGGAGAAACTGCGGGCA-GGAGTTCACAGGCGTTGTCTGTGTTGCCATTGCAGT
TGGTATGGAAGCTGTCCGGAAGCACAGCAGGCATGGAGCTGAAGAAGAAAGTGACCAAAGAGATCGCCACGGAGAACAAC
ATCTTGGTGGACTTCTCCGAGCTCCCGGAAGCAACGGAGGATGGCAACGATATTTTGGTGGACTTCTTTGAGCTCCAAGA
AGCAACCAAGGAAGGCAACAACAATGTTCCAGACAGTCAGGAGCTCCTCGGCGAAATGCCATGCCAGGACGACATGGATG
AAAGTTCAGAGTCGGACAATGACCATCCTCGCTCACATGGAACAAATACACCCGGGCTGGAGAGTGACGAGAATGTGCAT
ATCGTTACCAACTCTGATGGATCAGATGATGAGGAGGTTACAGGCCGGCGTAACCGAAGGTGGTGGCGCCTTGGGTGTGC
ATGAGAACTGAAATGACGACCTTCCTCTGCATCTGGCTAGAAATGTAACGATATGGGCAGCAGGGCAATGCCATTTGTAC
ATGTGCACCCACCAAATTGTGAATAGACATGAATACACACACGTGTAATTTCAAACTATCAACTACAATATGTAGATATC
CAACTAGTCCAGTCAACTGGAGTATCATCTATAAGAAATGTCAATTCTCATGGACCA---------ACCCCTAGTGGCCA
ATGCTACAATGTAACCACATTGCTTAACAGTCATTGACCTCATGGTCACCTATCTGCTGCTTGGCCACCGCCGTTCATCA
CCTTGATTTGATGATGTTGCTTTATAGTAACCACCATACCA------------ACATATCTTTAATGTCATGTTGTTCAA
GTATTTTTGTAACATATGTTGTGTCATGTTGTTCAAGTATTTTTGTAACATTACATTTTTTTAGACAATTTTGTAAACAT
TATGTGGGCCAGGTATAATTGCTAGCAAACCAACAAATATATTTACTCGACGAGATCAGTACAAAAACCAAAGATGGTCA
AACTTCGCCCAACATTGGTAAAAAAAAAACTTGGCCCAACAAAAATGCACAGGGGCGAAGATATAGAAGGGGAAAGAAGC
CAGTG-AAGGTGCGCTGCAAAGATCATGGCAAGAAAAAGCCCTGCAAGGCCCGCATTTGGATTTTCTTGTGGGTGATTTT
GAATTTTCTTGCTA-C-AAAAGAGCTGATCAGTTACCAGCGTGAATACTGATATTTGGTCAGTTCGGTAGCTGATGTGCA
TACAC------------AATTTGTCGGCATACGCAATTGTATACAACAACAGGGCAACATACGATAGATTGATATTCATA
CCACTATTCACAGAAGT------------ATAGAACCTTTTATTAAACTAAAAAAAGAGCAAACTATCTGTGGAATGACA
TTTGTGGAAAACACAATGGTGACGATAACCGTAGGAAACTAATATTTCCAAGCTCTCACTGCAGTCTAAGGCCTCAAGTC
AAATCCCTTT----------------------------------------------------------------------
---------------------
>chr4D_653
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----------------------------CCTAAGGGTAACCAACGAGGGTCTCATTTGCTCGCAATATTTTAAAAACATT
CGTAGCATTAGCGAAAGACATATAAATTGGATGTCATGGCATGTTAAATCCTACAAGGATTGAAAACACACGAGCCTACA
AATTCTTGCCCCTCCAAGGCGGACTTCAGCATGAGT----CCACAAGCAACCCATCTGATCATCTCCCTCCTC--CTCTC
CACGCAAAGGATCAGCAATGCAACCAAGATCAGCATCCAAACGCCGTCTGCTCTAGGCAATTAGCAATACAACCG----A
ATATAACAGAAGAGCAAAGCCAACACCCACCGCCGGGCCAACGTGCAAAAGCATAGTCCGGCCATGGGATTCCTCCACAA
GACCTCCAAGCAGACAGCGAAGCTCAAGTCCCTCCTCGGGCTCGCCGTCTCCCGCATCGCCGTCGCCCGCCGGCCGCGCC
TTGCTCGCAAGTCCATCGCCTGCAGCGATGTCAGCCAGCTCCTCGTCCTCGGCCACCTCAACCGCGCCCTCCACCGCGTG
CGTACCGACGACATGAAGCGAGACGTGGTGG----CTTGGATGCAGGCATACTGATGCTGGTGTTTCTGCGCGCAGGCAG
AGCAGGTTATCCAGGAGGACAACATGCTGGAGGCGTTCGGCATCATAGAGCTCTACTGCAAGCGCCTTATCGAGCAGGCT
GAGCAGTTAGACAAGCCACAGTATATTGT-TGCCTGCCTCATCACGCCTGTTCTCATCTTTGGTTCTCTATGTTCATTGG
ACAATGAACATTGCTATTCTGTTTGGGCTGTAGGGAGTGCGGCGAGGAGCTACGGGAAGCGGCGGCCAGCATCATGTTCG
CCGCCGGGTGGTGCGGCGACCTGCAGGAGCTGCTGTTTGCCCGTACCATCCTCGCAGACAAGTTCGGCGGCGACTTTGCT
GTCGCGGCCAAGGAGGGCACTGGCATCGTCGACCCCATCGTAAGAACTCTTAATA-ACATTTGATCATTT-TTAGCGGGT
CTCGTTGATCCGCAGCGTAAAATGGACAGAGGAACTGCGGGCG-GGAGTTCACAGGCGTTGTTTGTGTTGCCATTGCAGT
TGGTATGGAAGCTGTCCGGAAGCACAGCAGGCATGGAGCTGAAGAAGAAAGTGACCAAAGAGATCGCCGCGGAGAACAAC
ATCTTGGTGGACTTCTCCGAGCTCCCGGAAGCAACGGAGGACGGCAACGATATGTTGGTGGACTTCTTTGAGCTCCAAGA
AGCAACCGAGGAAGGCAACAACAACGTTCCAGACAGTCAGGAGCTCCTCGGCGAAATGCCATGCCAGGACGACATGGATG
AAAGTTCAGAGTCGGACAATGACCATCCTCACTCACATGGAACAAATACACCCGGGCTGGAGAGCGACGAGAATGTGCAC
ATTGTTACCAACTCTGATGGATCAGATGATG---AGGTTAAAGGTCGGCGCAACCGAAGGTGGTGGCGCCTTGGGTGTGC
ATGAGAACTGAGATGACGACCTTCCTCTGCATCCGGCTAGAAATGTAACGATATGTGCAGCAGGGCAACGCCATTTGTAC
ATGTGCACCCACCAAATTGTGAATAGACATGAATA-ACACATGTGTACTTTCAAACTATCCA--ACAATATGTCAATATC
CATCTACTCCAGTCAGCTG---TATCGTCTAAATGGAAATGTTAAGTCAGCTGTATCCCATGGCCGACCCATAGTGGCCA
ATGCTACAATATAACCACATTGCTTAACAGTCATGGACCTCATGGTCACCTATCTGCTGCTTGGTCACCGCCGTTCATCA
TCTTGATTTGATGATGTAG-TTTACAGTAACCACCATACCACTATGTTATCCAACCTATCTTTAATGTCACGCTGTGCAA
GTATTTTTGTAA----------------------------------------------------------------ACAT
TATGTGGACCAGGTATAATTGCTAGCAAACCAACAA--ATATTTACTCCACGAGATCAGTACAAAAACTAAAGATGGCC-
--------------------------AAACTTGGCACAACAAAAATGCACAGGGGCGAAGATATGGAAGGGGAAATAAGC
CAGTG-AAGGTGCGCTGCAAAGATCATGGCAAGAAAAAGCACTGCAAGGCCCGCATTTGGATTTTCTTGTGGGTGATTTT
GAATTTTCTTGCTA-CAAAAAGAGCTGATCAGTTACCAGCGTGAATACTGATATTTGGTCAGTTCGGTAGCTGATGTGCA
AATGCAAATCAAAATCAAATTTGTCGGCATACGCAATTGTATACAACAACAGGGCAACATACGATAGATTGATATTCATA
CCACTATTCACAGAAGTTTCTGCACAAGTATAGAACCTGTTATTAAACT-AAAAAAGAGCAAACTATCCGTGGAATGACA
TTTGTGGAAAACACAATGGTGACGATAACCGTAGGAAACTAATATTTCCAAGCTCTCACTGCAGTCTAAGGCCTCAAGTC
AAATTCCCTTTTGTATCC--AAAATAGATGAACAGTCATGGTTAACAGAGTTTGCTTTTGCGCTCCTTTGATGCAAATAC
GATTTTAAGTCTTTTGAGTAT
>SNPs
-------------------S--------------------S------------SS-------------------------
-----------S-------------S-------------------------------S----------------------
--S------------------------------------------------------S----------------------
-------------------------------------------------SSSS--------------------SS-----
--------S------------------------------------------------SS----------------S----
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----S--S-----------------S------------------------------------------------------
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-----------------------------------------------------S-S-------------------S----
----------------S--S-----SSS--------------------S-------------------------------
--------------------------------------------------------------S-------S---------
------------------------------------SSSS-----------------------S----------------
-----------S------------------------------------------------S-------------------
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S-----------------------------------S----------------------------------S--------
---------S------------------------------------------------S---------------------
--------------------------------S-----S-------S---------------------------------
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-----------------SS------------------------------------------------------S------
----------------------------S---------------------------------------------------
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--------------------------------S----------------S--SS--------------------------
---------S-S-----S----S---S----------------S----------S-------------------------
----S----------------S----S-SS-------S------------S----S--------------S---------
-----------------S-----S--S-------------------SS-----S---S----S----S-SS---------
------S--S------------------------------------------S-----S---------------------
--S-------------------S--------------S--------S---------------------------------
-----------S-----S-----------------------------------------------------------S--
---------------SS----------------------S--------------------S-SS--------------S-
-------------------------------------------S-------S--------SS------------------
----------------S--S-S------------S----------S-----------S----------------------
-----------S---------------------------------------S--S-S----------S------------
--------------------------------------------S---------------S-------S-----------
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---------------------------------------------------S---------------S------------
------------------------------S----------------------------S--------------------
----SS--------------------------------------------------------------------------
-S------------S-----------------------------------------------------------------
--------------------------------S-----------------------------------------------
----------------------S--------------------------------------------S-S----------
--------S-------------------------S---------------------------------------------
------------------SS-----------------------------------------S------------------
--S---S--------------
>forward_972
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------------------------------------------------------------------------CTCCTCTC
CACGCAAAGGAC--------------------------------------------------------------------
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>reverse_2886
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-----AAAGGTGCGCTGCAAAGATC-------------------------------------------------------
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