>input_sequence_59763
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----------------------------------------------------------------ATGGAATTGGGAGTTT
A------------------------CTACGGCATGGTAATGAGCAATTTGATGCTTGTGCTAACTGCGTTCATGGTCTCT
GCTACTTA---CCTCTTCATGAGGAGGATGAGAGGCAAGATGAGGCTGCCACCTGGGCCAGGCTTGGCCCTCCCGCTGGT
GGGCCACCTTCACCTGCTCCGCGAGAAGCCGCTCCACCTCATGCTGGCCGGCCTCGCCGCGCGCCACGGCCCCGTCCTCT
CCCTCCGCCTCGGCCGCCGCGCCGCCGTCGTTGTCACCTCGCTGCGGCTCGCCAAGGAGTGCTTCTCCTCCGAGCTGGAC
GTCAACTTCGCCAACCGTCCGCGGTTCCCCTCCGCGCGGGAGGTCTCGTTCGGCTACACGGGGCTGTCAGCCGCGAGCTA
CGGCCCGCAC----------------------TGGCGCGCCATGCGCCGCATCGCCACCGTGCACCTCCTCTCGGCGCGC
CGCGTCGACCTCATGTCCGACGCCGCCATCGCCGGCGAGATCCGTGCCATGGTGCGACGTCTTGCGCGCG---CTGCCGC
TG---------GTGGAGTTGCCAGGGTCGAGCTGAAGCGGAATCTGTTCGAGCTCTCGCACGGCGTCCTCATGGAGGCCA
TCGCTGGAGCCAAGGGCAAGCGCGGTGCCGGCTCCGACGCCGACATGTCCGAGGAGGCGCACGAGTTCAAGAAAGTGGTG
GATGAGATCGTGCCGCTGCTCGGCATGGCGAACCTGCACGACCACCTGCCGGCACTGCTGCGCTGGCTGGACTTGGGTGG
CGTACGCCGGAGGCTCACCCAGCTGGTGAACCGGAGGAACGCGCTGATGCACGGTCTGATCGATGCAGAGAGGGAACGGC
GGCGGCAGGAGG---------------------------------AGCTGCTGCCGGAGTCGAAGAGCATGATCGGCGTG
ATGCTCTCGTTGCAGGAGTCCGATCCGCAGCAGTACACAGACACTTTCATCGCCGCTTTAGTCACCGTGAGTGCTCTTCC
TCCTACTGCTTCGTCTTGTACGTTC-----ACGACCAAAA---TGCATATATCCATG-----CTGCTCTGCTCTGT----
----------------------------------------------------GAAGAACCTCTTCGGCGGCGGCACGGTG
ACCACGTCGGCGACCATGGAATGGGCCATGTCGCTGCTGCTCAACCACCCGG-CGC-GCTGCGGAAGGCGGGAGAGGAGG
TGA-----------------------------------------------------------------------------
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>chr3B_1_TraesCS3B01G043900
ACTGGTGG------------------------------------------------------------------------
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-------------------------------------------------------------------------ATTCATC
TCCACGTGGCTCTGCAGTGTGTATTGGGTCGACGATCGCCTACGGCGAAGTCAGAGTCGTTTTCTCAGTGTTTAGGGATG
GCGATGACACCTCTAGGGGAGTAGTACTGTTTGCAAGAACAATTTAAGTACGGCTTTTTTTTTGCGAATCATAGGAGTTT
TATTCCATATTTAAAGAGTTACAGTCGAGAGGCAAAAGATCCTTAGTACATGGTGGTCCTTGGTGCATCCACATAGTGGT
GGCACACTCAGTACAACTATACTTTGACAGGAAGTCGACAACCCTATTTTGATCCCTAGTTAACTTTTGTGGAATAAACT
CCCTGACTTTCATCAACTCCTTAATTTCAGCCA-GAGATGACCATAAGCAGACCGATCTAGCCCATCCGTTGTTAAACTG
GACAACGCCTCACTTGAGCCAGATTGGATAACGACTGGAAGGTTTA-GTGTGTTGAATAGCAAGCACCATTCCTTGCATG
ATTGCATGTATCTCCATCTCCAGTGCATCA--GCAATTTAAGTACGGTTAGTGATCGTAATAGCTAATATTAATAGTTTG
ATTTATGTCTTGGCCCGTCACTTTTTTTCTCCACGCACCGCCAAAGCAAACGTGATCAAACACAAGTACTAATAAAAAGC
TATACTATGTAGCAGTCATCAACATGACTCATATCAATAAAATGCAGTACCTAAAGTCCTAAACTATGTAGTAATGATCA
ATCAAACACCAATATAACAACGAACAACTTGATCAATCAAATATTTTTTACAAGTCACCAACCTAATCCAATATATACAA
CACCTAATGATTGTACCTTTTTCA---TAAAGTCC----TAATTAAACTAGACCTGACCTAGTGAAGTCCTTTTACTTTC
CAGGCCAACCAAGTAAAATC-------------TGCCAACAGTGC-AAGTACTTTGCTGAACGATAGATGCCAGATCTCG
TGG--------------AGTTATAACCAAAGGTAGCTAGAGCTAAACTGAGAGCTTAATTGGAGATGGAATTGGGAGTTT
A------------------------CTACGGCATGGTAATGAGCAATTTGATGCTTGTGCTAACTGCGTTCATGGTCTCT
GCTACTTA---CCTCTTCATGAGGAGGATGAGAGGCAAGATGAGGCTGCCACCTGGGCCAGGCTTGGCCCTCCCGCTGGT
GGGCCACCTTCACCTGCTCCGCGAGAAGCCGCTCCACCTCATGCTGGCCGGCCTCGCCGCGCGCCACGGCCCCGTCCTCT
CCCTCCGCCTCGGCCGCCGCGCCGCCGTCGTTGTCACCTCGCTGCGGCTCGCCAAGGAGTGCTTCTCCTCCGAGCTGGAC
GTCAACTTCGCCAACCGTCCGCGGTTCCCCTCCGCGCGGGAGGTCTCGTTCGGCTACACGGGGCTGTCAGCCGCGAGCTA
CGGCCCGCAC----------------------TGGCGCGCCATGCGCCGCATCGCCACCGTGCACCTCCTCTCGGCGCGC
CGCGTCGACCTCATGTCCGACGCCGCCATCGCCGGCGAGATCCGTGCCATGGTGCGACGTCTTGCGCGCG---CTGCCGC
TG---------GTGGAGTTGCCAGGGTCGAGCTGAAGCGGAATCTGTTCGAGCTCTCGCACGGCGTCCTCATGGAGGCCA
TCGCTGGAGCCAAGGGCAAGCGCGGTGCCGGCTCCGACGCCGACATGTCCGAGGAGGCGCACGAGTTCAAGAAAGTGGTG
GATGAGATCGTGCCGCTGCTCGGCATGGCGAACCTGCACGACCACCTGCCGGCACTGCTGCGCTGGCTGGACTTGGGTGG
CGTACGCCGGAGGCTCACCCAGCTGGTGAACCGGAGGAACGCGCTGATGCACGGTCTGATCGATGCAGAGAGGGAACGGC
GGCGGCAGGAGG---------------------------------AGCTGCTGCCGGAGTCGAAGAGCATGATCGGCGTG
ATGCTCTCGTTGCAGGAGTCCGATCCGCAGCAGTACACAGACACTTTCATCGCCGCTTTAGTCACCGTGAGTGCTCTTCC
TCCTACTGCTTCGTCTTGTACGTTC-----ACGACCAAAA---TGCATATATCCATG-----CTGCTCTGCTCTGT----
----------------------------------------------------GAAGAACCTCTTCGGCGGCGGCACGGTG
ACCACGTCGGCGACCATGGAATGGGCCATGTCGCTGCTGCTCAACCACCCGG-CGC-GCTGCGGAAGGCGGGAGAGGAGG
TGAGCGCGCACGTCGGCCACGC------CCGGCTCCTCGGCAGGGACGACCTCCCAAACCTCCCTTACCTCCGGTGCATC
ATCAGCGAGACCCTGCGGCTCTACCCCGCCGCGCCGCTGCTGTCGCCGCACGAGTCGTCCGCAGACTGCAGCCTCCACGG
GTACCACGTCCCGGCGGGCACCATGCTGCTCGCCAACGCCTACGCCATCCACCGTGACCCGTCCGTGTGGGACGAC---C
CAGAGGAGTTCAGGCCGGAGAGGTTCCACGTTAATGGCGCCGACGGGCAGGGCCAGCAGGG---GATGATGCTGCCGTTT
GGGATGGGGCGGCGGCGGTGCCCCGGCGAGAGCCTTGCGCTGAGGACCATGGGGCTGGTGCTGGGGACCTTCATCCAGTG
CTTCGACTGGAGCAGGGTGGCCGGAGACGAGGTTGACATGACGCAGGCCTCTGCCAAGATCTTGTATAAAGCTGTTCCTT
TGGTAGCTCTCTGCAAACCACATGACAGCATGCGGGCTATGCTTCAATCAGGAT--CTAGTTAGTCCATCAAGTCTCCTG
CCCCGTACAAAGTTGTACTAAACCAAAGACATCTATTTTAGACCTGCCACGCAAGATCTTTGGTCTTCCCCTGGAACCGA
TGAAAAAAAGTGGATCGCTTCTTATGTACTCGCTCAGAATGATTCTTCTCTATCTATAGTTCATGGCCTATTAGAAGTAG
AAGGTGCTCTGGTGCAATCCTTACCGACAGAAAAAGATTGCAGTCAGGTTGATAATAGTCGAGTGACATTACTTCGTCGG
TCCGAACTAAGGAATCTGTTAGAAATGTTTTGAAATGGATATTGTTCTCTCTTTGATCAGGGATTGCTATATGAAAAGAA
GTGGAGTTTGAAAAAGGGAACGGAATGCTCAAACCGAAACTGCTAGAGGAACGAATTTTCAATAGCATAACTTGGGCTCC
TAGAATATCCCCCGCCCC--------------------------------------------------------------
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----------------------------------------------------AAAGCGAGACTCTATCCAGATCTCAAAG
AATAACGAGCT-------------------------------
>chr3D_4
GATGAGACACTAGAAGAGGCTGCCACCTAGGCCAGGCTTGGCTCTCCTGCTGGTGGGCCACCTCCACCTGCTCCGTGAAA
ACCCGCTCCAATCCACGCTCGCCGGCATCGCCCGCGGCACGGCCCCATTCTCTCCCTCCGCCTGGGCCGCAGCGTCGCAT
TGTTGTCACCTTTCTGCAGCTGGCCAAGGAGTGCTTCTCCTTCGAGCTGGACGTCAACTTCGCCAACCGCTTGCGGTTCA
CCTCGGCATGGGAGGTCTCGTTCGGCTACATGGGGTTGTCGGCCGCCAGCTACGACTCGCACTGGCGTGCCATGCGCCGC
ATCGCCACTGTGCACCTCCTCTCGGCGTGCCGCGTGGACCTCATGTCTGACGCCGCCATCGTCGGCTAGACCCATGCCAT
GGTGCGACGCCTTGCACGCACTGCAACTGCGGTTGCCGGTGGCGTCGCTAGGGTCGAGCTGAAGTGGAATCTGTTCGAGC
TCTCGCATGGCGTCCTCATGGAGGCCATCGCGGGAACCAAGGGCAAGCGCGTTGCTGGCTCCGACACCGACTATCCTAGG
ACGCGCACGAGTTCAAGAAAGTGGTGGACGAGATTGTGGCGCTCCTCGGCATGGCCAACCTGCACGACCACTTGCTGGCA
CCCCTGTGCTGGCTGGACTTCGGCGGCATCTGCCGGAGGCTCACCCAGCTGGTGAACCGAAGGAGCGCGCTAATCTATGG
CCTGATAGATGTAGAGAGGCAGCAACGTCGGCAGGAGGACGCCAACGAGCTGCCGGACTCAAAGAGCATGATCCGCGTGA
TGCTCTTGCTGAAGGAGTCCGATCTGCAGCAGTACACGGACACTTTCATCGCCGCTCTAGTGCTGGAGCTTGGGTGAAAA
CCCTGTCTCGGCCTTGTGCTGTGACCAGCGATGGCGGCGGATGCGGCCGTCGTTAACCTTCTTGAAGGTATCGTTGCTTT
GCCTCTGCACCGCTCCTGCACGGATCTGGCCATCTCGGCCTCTCTAGGGGAAAACCTTGATCTTGTGTGATCGGACGATG
GCGGCGCCTTGGTGTCGTGTTCCCTCTTGGGGGCTTCGTCTTAGAGCTCGGGATCGGCAAGCGGGACCGGTGGATTCATC
TCCACGTGGCTCTGCAGTGTGTATTGAGTCGACAATCGCCTACGGCAAAGTCAGAGTCGTTTGCTCAGTGTTTAGGGATG
GCGATGACACCTCTAGGGGAGTAGTACTGTTTGCAAGAACAATTTAAGTATGGTTATTTTTTTGCGAATCATAGGAGTTT
TATTTCATATTTAAAGAGTTACAGTGGAGAGGCAAAAGATCCTCAATACATGATGGTCCTTGGTGCATCCACACAGCTGT
GGCACAGTCAGTACAACTATACTTTGCCAGGCAGTCGACAACTCTATTTTGATCCCTAATTAACTTTTGTGGAATGAACT
CCCTGGCTTCCATCAACTCCTTAATTTCATACACGAGATGACCATAAGCAGAACGATCTAGCCCATCCGTTGTTAAACTA
GACAACGCCTCACTTGAGCCAGATTGGACAATGACTGGAAGG-TTA-GTGTGTTGAATACCAAGCGCCATTCCTTGCATG
ATTGCAAGTATCTCCGTCTCCCGTGCATCGTTGCAATTTAAGTACGGTTAGTGATCATAATAGCTAATATTAATAGTTTG
ATTTATGTCTTGGCCCCTCACTTTTTT-CTCCACGCTCCGCCAAAGCAAACGTGATCAAACACAAGTACTAATAAAAAGC
--TACTATGTAGTAGTTATCAAAATGACTCATATCAATAAAATGCAGTACCTAAAGTCCTAAACTATGTAGTAATCATCA
ATCAAACACCAATATAACAATGAACAACTTGATCACTCAAGTATCTTTCACAAGTCACC-ACCTAATCCAACATATACAA
CACCTAATGATTGTACCATCTTTTTCCTAAAGTCC----TAATTAAACTAGACCTGAATTAGTGAAGTCCTTTTACTTT-
CAGGCCAACCAAGTACCT----------------------------AAGTCCATTGCTGAACGATGCCAGA------TCG
TGG--------------AGTTATAACCAAAGGTAGCTAGAGCTAAACTGAGAGC------------------------TT
AGTTGGAAATGGAATTGGGAGCTTAGTACGGCATGGTAATGAGCAATTTGATGCTTGTGCTAACAGTGTTCATGGTCTCT
GCTACTTA---CCTCTTGATGAGGAGGATGAGAGGAAAGAATAGGCTACCACCAGGGCCAGGCTTCGCTCTCCCGCTAGC
GGGCCACCCCCACCTGCTTCGTGAGAAGCCGCTCCATGTCACGCTCGCCGGCCTCGCCGCGCGCCACGGCCCCGTCCTCT
CCCTCCGCCTTGGCCGCCGCGACGCCGTCGTCGTCACCTCGCTGCGGCTGGCCAAGGAGTGCTTCTCCTCCGACCTCGAT
GTTGCCTTCGCCAACCGCCCGCGGTTCCCCTCCGCGCGGGAGGTCTCGTTCGGCTACACGGGGCTGCCGGCCGCTAGCTA
CGGCCCGCAC----------------------TGGCGCGCCATGCGCCGCATCGCCACCGTGCACCTCCTCTCGGCGCGC
CGCGTCGACCTCATGTCCGATGCCGCCATCGCCGACGAGACCCGTGTCATGGTGCGACGCCTTGCGCGCG---CCGCAGC
TGCGGTCAGCAGCGGCGTCGCCAAGGTCGAGCTAAAGCGGAATCTGTTCGAGCTCTCGCACGGCGTCCTCATGGAGTCCA
TTGCGGGAACCAAGGGCAAGCGCGGTGCCGGCTCTGACGCCGACATGTCCGAGGAGGCGCACGAGTTCAAGAAAGTGGTG
GACGAGATCATGCCGCTGCTCGGCATGGCGAACCTGCACGACCACCTGCCGGCACCGCTGCGCTGGCTGGACTTGGGCGG
CGTACGCCGGAGGCTCACCGAGCTGGTGAACCGGAGGAACGCGCTGATGCATGGTCTGATCGATGCAGAGAGGGAACGGC
GGCGGCAGGAGGACC------------ACGCCGCCGACGAGGAGGAGCTGCTGCCGGAGTCGAAGAGCATGATCGGCGTG
ATGCTCTTGCTGCAGGAGTCCGATCCGCAGCAGTACACGGACACTTTCATCGCCGCTCTAGTCACCGTGAGTGCTCCTCC
TCCTACTGGTTCGTCTTGCACGTTC-----ACGGCCAAAAGAATGCATATATCCACGTT-CTCTGCTCTGCTCTGT----
----------------------------------------------------GAAGAACCTCTTCGGCGGCGGCACGGTG
ACCACGTCGGCGACCATGGAATGGGCCATGTCGCTGCTGCTCAACCACCCGTACGC-GCTGCGGAAGGCGCGAGAGGAAG
TGAGCGCGCGTGTTGGCCACGC------CCGCCTCCTGAGCAGGGACGA----CCCCACCTCCCTTACCTCCGGTGCATC
ATCAGCGAGACCCTCCGGCTCTACCCCGCCGCGCCGCTGCTAGCGCCGCACGAGTCATCCTCCGACTGCAGCCTCCATGG
GTACCACGTCCCGGCGGGCACCATGCTGCTCGCCAACGCCTACGCCATCCACCGGGACCCGTCCGTCTGGGACGAC---C
CAGAGGAGTTCAGGCCGGAAAGGTTCGGCGTTAATAGCGCCGACGGGCAGGGCCAGCAGGG---GATGATGCTGCCGTTC
GGGATGGGACGGCGGCGGTGCCCCGGGGAGAGCCTTGCGCTGAGAACCATGGGGCTGGTGCTGGGGACCTTGATCCAGTG
CTTCGACTGGAGCAGGGTGGCCGGCGACGAGGTTGACATGACGCAGGCCTCTGCCAAGATCCTGTATAAAGCTGTTCCTC
TGGTAGCTCTCTGCAAACCCCACGACAACATGCGGGCTGTGCTTCACAAGATCTAGCTAGCTAGTCCATCAAGTCTCCAG
C-------------------------------------------------------------------------------
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>chr3A_115
AGTGAGTATTA---------------------------------------------------------------------
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-----------------------------TTTGCAAGAACAATTTAAGTATGG----TTTTTTGCGAAACATAAGAGTTT
TATTCCATATTTAAAGAGTTATAGTCGAGAGGAGAAAGATCCTCAATACATGGTGGTCCTTGGTGCATCCACACAGCCGT
GGCACACT-AGTACGACTATACTTTGCTAAGCAGTCGACAACTCTATTTTGATCCCTAGTTAACTTTTGTTGAATAAACT
CCTTGATTTTTATCAACTCCTTCATTTCATCCACGAGAAGACCATAAGCAGAAAGATCTAGCCCATCCGTTGTTAAACTG
GACAACGCCTCACTTGAGTCTGCTTGGACAATGACTGAAAGGTTAGTGTGTGTTGAATAGCAAGCACCATTCCTTGCATG
ATTGCATGTATCTCTATCTTCAGTGCATCATTGCAATTTAAGTATGGTTAGTGGTCGTAATAGCTAATATTAATAGTTTG
ATTTATGTCTTGGTCCCTCGCTTTTTT-CTCCACGCTCCGCCAAAGCAAACATGATCAAACACAAGTACTCGTCAAAACC
--AACTATGCAGTAGTCATCAACATGACTCATATCAATAAAATGCAGTACCTATAGTCCTAAACTATGTAGTGATCATCA
ATAAAACACCAATATAACAATGAACAACTTGACCAATC-AATATTTTTTACAAGTCACG-ACCTAATCCAACATATACAA
CACCTAATGATTGTACCTTCTTTTTCCTAAAGGCCTAATTAATTAAACTAGACCTGAACTAGTGAAGTCCTTTTACTTTC
CAGGCCAACCAAGTAAAATC-------------TGCCAACAGTGC-AAGTACATTGCTAAACGATGCCAGA------TCG
TGG--------------AGTTATAACCAAAGGTTGCTAGAGCTAAACTGAGAGC------------------------TT
A------------------------CCACAGCATGGCAATGAGCAATTTGATGCTTGTGCTAACAGTGGTCATGGTCTCT
GCTACTACGTGCCTCTTGAT------GATGAGACGCAAGAAGAGGCTGCCACCTGGGCCAGGCTTGGCTCTCCCGCTGGT
GGGACACCTCCACCTGCTCCGCGAGAAGCCGCTCCACGCCACGCTCGCCGGCCTCGCCGCGCGCCACGGCCCCGTCCTCT
CCCTCCGCCTCGGCCGCCGCGCCGCCGTCGTCGTCACCTCGCTGCGGCTGGCCAAGGAGTGCTTCTCCTCCGACCACGAC
GTCAACTTCGCCAACCGCCCGTGCTTCCCCTCCGCGCGGGAGGTCTCGTTCGGCTACATGGGGCTGTCCGCAGCGAGCTA
CGGCCCGCAC----------------------TGGCGCGCCATGCGCCGCATCGCCACCGTGCACCTCCTCTCGGCGCGC
CGCGTCGACCTCATGTCCGACGCCGCCATCGCCGGCGAGACCCGCGCCATGGTGCGACGCCTTGCGCGCG---CTGCCGC
CG---------GTGGCGTTGCCAGGGTCGAGCTGAAGCGGAATCTGTTCGAGCTCTCGCATGGCGTCCTCATGCAGGCCA
TCGCGGGAGCCAAGGGCAAGCGCGGTGCCGGCTCCGACGCCGACATGTCCGAGGAGGCACACGAGTTCAAGAAAGTGGTG
GACGAGATCGTGCCGCTGCTCGGCATGGCGAACCTGCACGACCACCTGCCGGCACCGCTGCGATGGCTGGACTTGGGTGG
CGTGCGCCGTAGGCTCACCGAGCTGGTGAATCGGAGGAACGCGCTGATGCACGGTCTGATCGACGCAGAGAGGCAACGGC
GGCGGCAGGAGGACC------------ACGCTGCCGACGAGGAGGAGCTGCTGCCGGAGTCGAAGAGCATGATCGGCGTG
ATGCTCCAGCTGCAGGAGTCCGATCCGCAGCTGTACACGGACACTTTCATCGCCGCTCTAGTCACCGTGAGTACTCCTC-
TCCTACTGCTTCGTCTTGTACGTTTTATATACAACCAAAA---TGCATATATCCACGCTGCTCTGCTCTGCTCTGT----
----------------------------------------------------AAAGAACCTCTTCGGCGGCGGCACGGTG
ACCACGTCGGCGACCATGGAATGGGCCATGTCGCTGCTGCTCAACCAGCCGGACGC-GCTGCGGAAGGCGCGAGAGGAGG
TGAGCGCGCGTGTCGGCCACGC------CCGCCTCCTCGGCAAGGAGGACCTCCCCCACCTCCCTTACCTCCGGTGCATA
ATCAGCGAGACCCTGCGGCTCTACCCCGCCGCGCCACTGCTGTCGCCGCACGAGTCCTCCGCCGACTGCAGCCTCCATGG
CTACCACCTCCCGGCGGGCACCATGCTGCTCGTCAACGCCTACGCCATCCACCGGGACCCGTCCGTGTGGGACAAC---C
CTGAGGAGTTCAGGCCAGAGAGGTTCGACAGTAATGGCGCCGACGGCCAGGGCCAGCAGGGGATGATGATGCTGCCGTTC
GGTATGGGGCGGCGGCGGTGCCCCGGGGAGAGCCTCGCGCTGAGAACCATGGGGCTGGTGCTGGGGACCTTGATCCAGTG
CTTCGACTGGAGCAGGGTGGCCGCCGACGAGGTTGACATGACGCAGGCCTCTGCCAAGATCTTGTATAAAGCTGTTCCTT
TGGTAGCTCTCTGCAGACCACATGACAACATGCGGGCTATGCTTCAATCAGGAT--CTAGCTAGTCCATCAAGTCTCC--
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>chr3D_525
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---------------------------------CAATTTAATTATGGGTAGGCATCCTAATAGCTAATATGAACAATTTA
A--------TTGGCCCCCCACTTTTC-TCTCCACGCTCTGCCAAAGCAAACGTGATCGAACACAAGTACTCATCAAAAAC
--TACTATGTAGTAGCCATCAACATGACTC--ATCAATAAAATGTAGTACCTATAGTCCTAAACTATGTAGTAATCATCA
ATAAAACACCAATATAACAATGAACAACTTGATCAATCAAATATTTTTTACAAGTCACC-ACCTAATTCAACATATACAA
CACCTAATGATTGTACCTTTTTT---CTAAAGTCC----TAATTAAACTAGACCTGAACTAGTGAAGTCCTAGATCCTAA
CAAAAAGGAAAGTACAAGTCCTAGATAATTAAATGCCAACAGTACAAAGTACATTGCTGAAAGATGCCAGA------TCG
TGGATTATAAGTTAGTAAGTTATAACCAAAGGTAGCTAGAGCTAAACTGAGAGC------------------------TT
AATTGGAGATGGAATTGGGAGCTTACTACAGCATGGTAATGAGCAATTTGATGCTTGTGCTAACTGTGTCCATGGTGTCT
GCTACTTA---CCTCTTGATGAGGAAGATGAGAGGCAAGAAGAGGCTGCCACCTGGGCCAGGCTTGGCCCTCCCGCTGGT
GGGCCACCTCCACCTGCTCCGCGAGAAGCCGCTCCACGTCACGCTCGCCGGCCTCGCCGCGCGCCACGGCCCCGTCCTCT
CCCTCCGCCTTGGCCGCCGCGACGCCGTCGTCGTCACCTCGCTGCGTCTGGCCAAGGAGTGCTTCTCCACCGAGCTGGAC
GTCAACTTCGCCAACCGCCCGCGGTTCCCCTCCGCGCGGGAGGTCTCGTTCGGCTACACGGGGCTGTCGGCCGCCAGCTA
CGGCCCGCAC----------------------TGGCGCTCCATGCGCCGCATCGCCACCGTGCACCTCCTCTCCGCGCGC
CGCGTCGACCTCATGTCCGACGCCACCATCGCCGGCGAGACCGGCGCCATGGTGCGACGCCTTGCGCGCG---CCGCAGC
TGCGGCCAGCGGCGGCGTCACCAGGGTCGAGCTGAAGCGGAATCTGTTCGAGCTCTCGCACGGCGTCCTCATGGAGGCCA
TCGCGGGAGCCAAGGGCACGCGTGAT---GGCTCCGACGCTGACATGTCTAAAGAGGCGCACGAGTTCAAGAAAGTGGTG
GACGAGATCGTGCCGCTGCTTGGCATGGCGAACCTGCACGACCACCTGCCAGGACCCCTGCGATGGCTCGACTTCGGCGG
CGTGCGCCGGAGACTCACTGAGCTGGTGAACCGGAGGAACGCGCTGATGCACGGTCTGATCGATGCAGAGAGGCAACGGC
GGCCGCAGGAGGACC------------ACGCCACCGAC------GAGCTGCTGCCGGAGTCGAAGAGCATGATAGGCGTG
ATGCTCTCGCTGCAGGAGTCCGATCCGCAGCAGTACACGGACACTTTCATCGCCGCTCTAGTCACCGTGAGTACTCCTCC
TCCTACTGGTTCGTCTTGCACATTC-----ACAACCAAAA---TGCATATATCCACGCTCCTCTGCTCTGCTCTGT----
----------------------------------------------------GAAGAACCTCTTCGGCGGCGGCACGGTG
ACCACGTCGGCGACCATGGAATGGGCCATGTCGCTCCTGCTCAACCACCCGGACGC-GCTGCAGAAGGCGCGAGAGGAGG
TGAGCGCCCGCGTCGGCCACGC------CCGCCTCCTCAGCAGGGAGGACCTCCCCCACCTCCCTTACCTCCAGTGCATC
ATCATCGAGACCCTGCGGCTCTACCCCGCCGCGCCGCTGCTAGCGCCGCACGAGTCGTCCGCCGACTGCAGCCTCCATGG
GTACCACGTCCCGGCGGGCACCATGCTTCTCGCCAACGCCTACGCCATCCACCGGGACCCATCCGTCTGGGACGAC---C
CAGAGGAGTTCAGGCCGGAGAGGTTCGACGTCAATGGCGCCGACGGGCAGGGCCAGCAGGGGATGATGATGCTGCCGTTC
GGGATGGGGCGGCGGCGGTGCCCCGGGGAGAGCCTTGCGCTGAGAACCATGGGGCTGGTGCTGGGGACCTTGATCCAGTG
CTTCGACTGGAGCAGGGTGGCCGGCGCCGAGGTTGACATGACGCAGGCCTCTGCCAAGATCCTGTATAAAGCTGTTCCTT
TGGTAGCTCTCTGCAAACCGCACGACAACATGCAGACTATGCTTCACAAGATCTAG------------------------
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>chr2A_1113
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-------------------------------------------GGCTTCCACCGGGCCCGGCGCTGGCGGTCCCGTTCCT
TGGCCACCTCCCCT---TCCTCAAGAAGCCGCTGCACGCCACGCTCGCGCGCCTCGCCGCGCGCCACGGCCCGGTCTTCT
CCCTCCGCCTCGGCTCGCGCCCCGCCGTCGTCGTCACCTCGGCGGAGCTCGCCAGGGAGTGCTTCTCCTCCGACCTCGAC
GCCACGCTCGCCAACCGCCCGCACTTCCCGTCCGTGCGGGAGGTCTCCTTCGACTACACCGTGCTCACCCTCGCCAACTA
CGGCGCCCAC----------------------TGGCGCGCCGCGCGCCGCGTCGCCGTCGTGCACCTCCTCTCCGCGCGC
CGCGTCGACCTCATGTCCGACGCCGTCGTAGCCCGCGAGCTGCGAGCCCTGGTGCGCCGCCTCGCGCGCCTTACCGCCGG
CG---------GTGCCACGGCGAGGGTGGAGCTGAAGCGGCGGCTGTTCGACCTCTCCCACAGCGTCCTCATGGAGGCCC
TCGCGCGGAGCAGGAACACCTACT---CCGACGACGGAGCGGACATGTCCCAGGAGGCGCGGGAGATGAAGGACGTCGTG
GACGCCACCGTGCCGCTCGTCGGTGTCGCCAACCTGTGGGACTACCTGCCGG---TGCTACGCTGGTTCGACTGGCGAGG
CGTCGCGCGGCAGCTGGCGGACACAACCAGCCGGAGGAACGCCTTCATCTACAAGCTCATCGACAGGGA---------GA
GGCAGAAGCAGCAGG------------CCGCCGCCGACAAGCAGGAG---GAGGAGGAGC---AGGGCATGATCGGCGTC
ATGCTCTCGCTGCAGAAGTCAGAGCCCGGCCTCTACACGGACACTTTCATCGCCGCCCTCGTCGCCGTGAGTCTCGCAGC
----TTCCAT---------------------------------------------TG-----CAGCTCTGTCACCGTTCA
TGCTCTGATTATTTGACAGGCACTGATTTTCTCGTGTTTGAACC--------GAAGAATCTTCTTGGCGTCGGGACAGAG
ACGACGTCGACGACGACGGAATGGGCGATGGGGCTCCTGCTGAACCACCCGG-CGGTGCTGAAGAAGGCACAGGAAGAGA
TCGACGCGCACCTCAGCGGCGAGCCGAGCCGCCTCCTCGACAAGAAGGACCTGCCCCACCTTCCTTACCTCCACTGCATC
ATCAGCGAGACGCTGCGGCTGTGCCCGGCCGCGCCGCTGCTGCTACCACACGAGGCCGCCGCCGACTGCCAGCTCCACGG
GTACGACGTCGCCGCGGGCACCATAGTGCTCGTCAACGCGTACGCCATCCACCGCGACCCGGCTGAGTGCGGACCGGCGC
CCGAGGAGTTCAGGCCGGAGAGGTTCGAGCATGGCAGCGCCG---------------ATGGGAAGCTCATGATGTCCTTC
GGGATGGGAAGGCGCAAGTGCCCCGGGGAGAGCCTCGCCATGAGGACCATGGGTATGGTTCTTGGCACGCTCATCCAGTG
CTTCGATTGGGCAAGGGTCGGGGATGAAGAGGTCGACATG----------------------------------------
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>chr2A_1113
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-------------------------------------------GGCTGCCGCCTGGCCGGGCGCTGGCGCTACCGTTCCT
TGGCCACCTTCCCT---TCCTCAAGCAGCCGCTGCACGCCACTCTCACGCGCCTCGCCGCGCGCCATGGCCCGGTCTTCT
CCCTCCGCCTCGGCTCGCGCCCCGCCGTCGTCGTCGCCTCGGCGGAGCTCGCCAGGGAGTGCTTCTCCTCCGAGCTCGAC
GCCACGCTCGCCAACCGGCCGCGCTTCCCGTCCTTGAAGGAGGTCTCCTTCGACTACAGGGCGCT---------------
-------CACCGTCGCCAGCTACGGCGCTCACTGGCGCGCCGCGCGCCGCGTCGCCGTCGTGCACCTCCTCTCAGCGCGC
CGCGTCGACCTCATGTCCGACGCGGTCGTCGCCCGGGAGCTGCGCGCCCTGGTGCGCCGTCTCGCGCGCG---TCGCCGC
CG---------GTGGCGCGGCGAGGGTGGAGCTGAAGCGGCGGCTGTTCGACCTCTCCCACAGCGTGCTCATGGAGGCCA
TCGCGCGGAGCAGGAACACCTACT---CCGACGACGGAGCGGACATGTCCCGGGAGGCGCGGGAGATGAAGGACATCGTG
GACGCCATCGTGCCGCTCGTCGGTGTCGCCAACCTGTGGGACTACCTTCCGG---TGCTGCGCTGGCTCGACTGGCGAGG
CGTCAGGCGGCGTCTGGCCGACGCAACGAGCCGGAGGAACGCCTTCATCTATAAGCTCATCGACGGGGA---------GA
GGCAGAAGCGGTTGAACGCTGCTGCGGATGCCGCTGACAAGCAGCAGGAGGAGCAGGAGC---AGAGCATGATCGGCGTC
ATGCTCTCGCTGCAGAAGTCAGAGCCCGAGCTGTACACAGACACTTTCATCGCCGCCCTTGTCGCAGTGAGTCTCT----
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>chr2D_1113
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-------------------------------------------GGCTGCCACCCGGCCCGGCGCTGGCGGTCCCGTTCCT
TGGCCACCTCCCCT---TCCTCAAGAAGCCGCTGCACGCCACGCTCGCGCGCCTCGCCGCGCGCCACGGCCCGGTCTTCT
CCCTCCGCCTCGGCTCGCGCCCCGCCGTCGTCGTCACCTCGGCGGAGCTCGCCAGGGAGTGCTTCTCCTCCGACCTCGAC
GCCACGATCGCCAACCGCCCCCACTTCCCGTCCGTGCGGGAGGTCTCCTTCGACTACACCGTGCTCACCCTCGCCAACTA
CGGCGCCCAC----------------------TGGCGCGCCGCGCGCCGCGTCGCCGTCGTGCACCTCCTCTCCGCGCGC
CGCGTCGACCTCATGTCCGACGCCGTCGTCGCCCGCGAGCTGCGCGCCCTGGTGCGCCGCCTCGCGCGCC---TTACCGC
CG---------GCGGTGCGGCGAGGGTGGAGCTGAAGCGGCGGCTGTTCGACCTCTCCCACAGCGTCCTCATGGAGGTCC
TCGCGCGGAGCAGGAACACCTACT---CCGACGACGAAGCGGACATGTCCCAGGAGGCGCGGGAGATGAAGGACGTCGTG
GACGCCATCGTGCCGCTCGTCGGTGTCGCCAACCTGTGGGACTACCTGCCGG---TGCTACGCTGGTTCGACTGGCGAGG
CGTCGGGCGGCAGCTGGCGGACACAACCAGTCGGAGGAACGCCTTCATCTACAAGCTCATCGACAGGGA---------GA
GGCGGAAGCAGCAGG------------CCGCCGCCGACAAGCAG------GAGGAGGAGC---AGGGCATGATCGGCGTC
ATGCTCTCGCTGCAGAAGTCAGAGCCCGACCTCTACACGGACAATTTCATCGCCGCCCTCGTCGCCGTGAGTCTCTGTCA
TCGGTTCCAT---------------------------------------------TC-----AAGCTCCGTTACCGTTCG
TGCCCTGATTATTTCAA----ACTAATCTTCTCGTATTTGGAATTTTGGATGGAAGAATCTTCTTGGCGTCGGGACAGAG
ACGACGTCGACGACGACGGAATGGGCGATGGCGCTCCTGCTGAACCACCCGG-CGGTGCTAAAGAAGGCACAGGAAGAGA
TCGACGCGCACCTCAGCGGCGAGCCGAGCCGCCTCCTCGACAAGAAGGACCTGCCCCACCTTCCTTACCTCCACTGCATC
ATCAATGAGACGATGCGGCTGTGCCCGGCCGCGCCGCTGCTGCTACCACACGAGGCCGCCGCCGACTGCCAGCTCCACGG
GTACGACGTCGCCGCGGGCACCATCGTGCTCGTCAACGCGTACGCCATCCACCGCGACCCGGCTGAGTGGGGACCGGCGC
CCGAGGAGTTCAGGCCGGAGAGGTTCGAGCATGGCGGCGCCG---------------AGGGGAAGCTCATGATGTCCTTC
GGGATGGGAAGGCGCAAGTGCCCCGGGGAGAGCCTCGCCATGAGGACCATGGGTATGGTTCTTGGCACGCTCATCCAGTG
CTTCGATTGGAAAAGGGTCGGGGATGAAGAGGTCGACATG----------------------------------------
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>chr7D_1113
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-------------------------------------------GGTTGCCGCCTGGCCCGGCGCTGGCGCTGCCGTTCCT
TGGCCACCTCCCCT---TCCTCAAGCAGCCGCTCCACGCCACGCTCGCGCGCCTCGCCGCGCGCCATGGCCCGGTCTTCT
CCCTCCGCCTCGGCTCGCGCCCCGCCGTCGTCGTTGCGTCGGCAGAGGTCGCCAGGGAGTGCTTCTCCTCCGAGCTCGAC
GCTACGCTCGCCAACCGGCCGCGCTTCCCGTCCTTGCAGGAGGTCTCCTTCGACTACAGGGCGCT---------------
-------CAC----------------------TGGCGCGCCGCGCGCCGCGTCGCCGTCGTGCACCTCCTCTCCGCGCGC
CGCGTCGACCTCATGTCCGACGCCGTCGTCGCCCGGGAGCTGCGCGCCCTGGTGCGCCGCCTCGCGCGCG---TTGCCGC
GG---------GTGGCGCCGCGAGGGTGGAGCTGAAGCGGCGGCTGTTCGACCTCTCCCACAGCGTCCTCATGGAGGCCA
TCGCGCGGAGCAGGAACACCTACT---CCGACGACGGAGCGGACATGTCCCAGGAGGCGCGGGAGATGAAGGACATCGTG
GACGCCATCGTGCCGCTCGTCGGTGTCGCCAACCTGTGGGACTACCTTCCGG---TGCTGCGCTGGCTCGACTGGCGAGG
CGTCAGGCGGCGGCTGGCGGACGCAACGAGCCGGAGGAACGCCTTCATCTACAAGCTCATCGACGGGGA---------GA
GGCAGAAGCGGTTGAACGCTGCTGCGGATGCCGCCGACAAGCAGCAGGAGGAGGAGGAGC---AGAGCATGATCGGCGTC
ATGCTCTCGCTGCAGAAGTCAGAGCCCGACCTGTACACGGACACTTTCATCGCCGCCCTCGTCGCCGTGAGTCTCT----
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>chr5D_2718
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----------------------------------------GACCTGCCGCGCAAGATCTTTGGTCTTCCCCTGGAACCGA
TGAAAAAAAGTGGATCGCTTCTTATGTACTCGCTCAGAATGATTCTTCTCTATCTATAGTTCATGGCCTATTAGAAGTAG
AAGGTGCTCTGGTGCAATCCTTACCGACAGAAAAAGATTGCAGTCAGGTTGATAATAGTCGAGTGACATTACTTCGTCGG
TCCGAACTAAGGAATCTGTTAGAAATGTTTTGAAATGGATATTGTTCTCTCTTTGATCAGGGATTGCTATATGAAAAGAA
GTGGAGTTTGAAAAAGGGAACGGAATGCTCAAACCGGAACTGCTAGAGGAACGAATTTTCAATAGCATAACTTGGGCTCC
TAGAATATGGCGCCCTTGGGACAATCTATCTATATAAAGATAAAGAGGCAATCGTGTCAGGAAGCGGGTTTTTCTTTGGC
CAAAAGGTACTTCGAACTTGGAACGAGCATGAAGAGATTAACGAGACTTCTTTCTCTTTTGAGTTTTTCTGGCGGACCTG
CCGCGCAAGATCTTTGGTCTTCCCCTGGAACCGATGAAAAAAAGTGGATCGCTTCTTATGTACTCGCTCAGAATGATTCT
TCTCTATCTATAGTTCATGGCCTATTAGAAGTAGAAGGTGCTCTGGTGCAATCCTTACCGACAGAAAAAGATTGCAGTCA
GGTTGATAATAGTCGAGTGACATTACTTCGTCGGTCCGAACTAAGGAAACTGTTAGAAATGTTTTGAAATGGATATTGTT
CTCTCTTTGATCAGGGATTGCTATATGAAAAGAAGTGGAGTTTGAAAAAGGGAACGGAATGCTCAAACCGGAACTGCTAG
AGGAACGAATTTTCAATAGCATAACTTGGGCTCCTAGAATAT
>SNPs
-S--SSSS------------------------------------------------------------------------
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--------------------------S------S------------S---------------S-----------------
--------------------------------------------------S--S-S------------------------
-------------------------------------------S-S---------------------------S--SS--
--------------------------S----S----------S-------------------------------------
-----------------------------S----------------------S---------------------------
----------------------------S--S------------------------------------------------
--------------------------------------------------------------------------------
----------------S-------------------S-------------------------------------------
SS----------S--------------------------------------------------------------S----
--------------------S--------------------------------------S-----------S--------
----------------------SS---------------------------------S----------------------
----------------------------------------------------S------------SSSS-SSSSSSS---
------------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSS--
------------------------------------------------------------------S-------------
-----------------S----------------------S---------------------------------------
-------------------------------------S---S---S----------------------------------
-------------------------------S------------------------------------------------
-----------------S--------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
----S---------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
---------S-----------------------------------------------S------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
-------------------------------S-----------------------SS-----------------------
--------------------------------------------------------------S-----------------
------------------------------------------------------S-------------------------
--------------------------S----------------------------------------------------S
--------------------------S-----------------------------------------------------
------------------------S-------------------------------------------------------
---------------------------S--------------------------------S-----------------S-
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
--------SS-S-S-SSS--------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------S-SS-SS---S-S--S--S--SSS--
-SS-----SS--------------------------------
>forward_1147
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-------GGCTCTGCAGTGTGTATTGG-----------------------------------------------------
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>reverse_2152
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-----------------------------------------------------------------------TGGGAGTTT
ACTACGGCATGG--------------------------------------------------------------------
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>forward_2053
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--------------------------------TCTGCCAACAGTGCAAGTACT---------------------------
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>reverse_4039
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--------------------------------------TAGACCTGCCACGCAAGATC----------------------
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------------------------------------------
