>input_sequence_59746
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------ATGCCGCAGGTTGGGCTTTCAAAAACT
TTACCGGCCCGATCCAAAATTCTTGGCAGGACGATGAGGCGGACCACGGCGTTGCTGCTGCGCCACGGCGGCGGCGGGAT
CCCGCAGGCGCTCGCCGACGTGCTCGTCTGCCCCCTGTCCAAGAAGCCTCTCAGGTAGCCAAGTCAGGCAATATCTGGCC
CCTCCTACTTCCACAATA--CCCTTTGATTGATCTCGTCTCTTTCCTTTCCCCACCAGGTATTGCGAGGCCAGCGGCTCT
CTGGTCAGCGACGCCGTCGGCATGTCCTTCCCGGTGAGTTCCGGTGCCCCCTCCCGCTCCTCTATGCGCCGCGCTTGTTG
AATGCTTGGGTCTGCAACCCTCTAGAGGTTTTAGCCGCTATTC--CATGCTTGCGGCTTACCTGTTTGCTGTATTGCCTC
CGCGAAAATGGAAACCCATTCAACAGATGTAAAACGAAAAGGGGGC-GATTTCCTAGTACCTTTATGCAATGAAAACATA
AAATGCGCAGAAGAGACTCAATTCAGGAAGTAGCTGGTGATAACTAGTCTTCAGACAGCATCTCTCTATGGTTATCGAGA
ATTTCACTGTTTG--AGATGAAGTTTTAGAACATGGGAGATGCTCGTATTACCAAAG-----------------------
--------------------------------------------------------------------------------
---------------------------TACTGGTGTTAGCATGCTGGGATCAACGCGTGTGCAGTGGTGTGTGGGGACAG
ACTCACAGACTAGAG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TGGTACGGTGA---GAGAAAATGATTAAAGTGCACA--TAATGGCTAACAACCAACTGATTTGATGTT
CTGAAACAGGGATATTTTATGTCAACTTTGAACTTTTAGGATAAACATGTTCCTATGGAATTTCAGGATCTCAATTTATT
GCTTCCTGTAGCATTTCATCAATTTCTTGTGGCATCTCTGGCATACTTACATTACTCCTTGTGAACAGTATCTCTGGCAT
TTCCACTCATCATTTCTGCTTAGCAGTTAGCCCTGATTTCATCCTGACATTAACTGCAGATAGTAGATGGAATTCCTTG-
CTCCTTCCGAAAGACGGGAAGTTGCTCGAAGACCACCAGAGGGAATCAGGACATGAGACCAGCTCTAGGGATTCCTCTGA
TTGAATCCACGTTGTTGTACAAGCCGGTAACATCGTTCTGTATTTAA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>chr1D_1_TraesCS1D01G138800
AGCTGGTCGTCCATGCTCAGAACCGACTGATGAAATGCCACGGTGGAATGAGTTTATTTC--------------------
-----------ATCTTGGAAGTGGAGATAAAACGATGTTCCTTCCCTGGGCAGGGCTGGACGCTCACCACGATCTCGGCC
GTGAGGGGGTCGAAGCCGCAGCCACCGGAGGCGAAGCTGACGCCGGTGAGGAGGTCCGAGTCGCTGAGCTCCGTGCCGAG
GTACGCCGGCACGTACTGCTTCAGGCCCATCCGGGCGGCTGGCAGGATCAAATGCCAACCATCAGTTTCAATGCCT----
-GCCATGCCATGCCATGCATGCTTGAACCTTATG-----------------------------------ATATACCCATA
CCGAGGATGTCGCCGACGATCTTGCCGTTGCTGAACCTGCCGGTGGCGTTGTGGGCGGGGAAGTCCTGGCCGTAGGGCGC
GAAGTCGCACCGCACCGCCGTGGTGAGGCCGTTGTTGTTGCCCGGGTCCACGATGGAGTCCCCGAACAGGATCAGCGCCG
GCGGCCGCGTCTGGCTCGAGCCCGGCTGGGAAGCGGCAGTGCAGCAGCAGGGACGCTGCAGCAGCATCAATGCCACGAGT
GCTGTTATGATGAGAATGAGGCGGCGCGTTGCTCCTCCGGCTCCGGTCGTGCATTCGCCGGCCATGGCCATGCCTGCTCC
GGTGTCGGTGCTGATCAGCTC---GCTCACTCACACCACG------------CCTCCTGCTGCTGCTCTGTCCGATCGAT
GCTTCTCTTCTAGCTAGAGCGCGTAATAGTT----ATAGAGACACCTTCAATCTCATCTTAACTTGTGTAATTCCCTCCC
CATTTCTTGCAAGATTCAGACTCCAAATCCACAAGTTTCGGCTACCTCGGTTAATGCATTTTTGTTGTTTCGTCAAGTGA
GGTGACACACGTCCGTGTGAGCGTTGTCTTCGGTTTTTTAGCGG---AATCTTGGAAGGGAAATTTTCGTGCCTGCCCCA
ACCGTTCGCCACCTTCTAGAGATGGGCTGGGTTGTATTGTGTGAGCCGAATGGATGCCGCAGGTTGGGCTTTCAAAAACT
TTACCGGCCCGATCCAAAATTCTTGGCAGGACGATGAGGCGGACCACGGCGTTGCTGCTGCGCCACGGCGGCGGCGGGAT
CCCGCAGGCGCTCGCCGACGTGCTCGTCTGCCCCCTGTCCAAGAAGCCTCTCAGGTAGCCAAGTCAGGCAATATCTGGCC
CCTCCTACTTCCACAATA--CCCTTTGATTGATCTCGTCTCTTTCCTTTCCCCACCAGGTATTGCGAGGCCAGCGGCTCT
CTGGTCAGCGACGCCGTCGGCATGTCCTTCCCGGTGAGTTCCGGTGCCCCCTCCCGCTCCTCTATGCGCCGCGCTTGTTG
AATGCTTGGGTCTGCAACCCTCTAGAGGTTTTAGCCGCTATTC--CATGCTTGCGGCTTACCTGTTTGCTGTATTGCCTC
CGCGAAAATGGAAACCCATTCAACAGATGTAAAACGAAAAGGGGGC-GATTTCCTAGTACCTTTATGCAATGAAAACATA
AAATGCGCAGAAGAGACTCAATTCAGGAAGTAGCTGGTGATAACTAGTCTTCAGACAGCATCTCTCTATGGTTATCGAGA
ATTTCACTGTTTG--AGATGAAGTTTTAGAACATGGGAGATGCTCGTATTACCAAAG-----------------------
--------------------------------------------------------------------------------
---------------------------TACTGGTGTTAGCATGCTGGGATCAACGCGTGTGCAGTGGTGTGTGGGGACAG
ACTCACAGACTAGAG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TGGTACGGTGA---GAGAAAATGATTAAAGTGCACA--TAATGGCTAACAACCAACTGATTTGATGTT
CTGAAACAGGGATATTTTATGTCAACTTTGAACTTTTAGGATAAACATGTTCCTATGGAATTTCAGGATCTCAATTTATT
GCTTCCTGTAGCATTTCATCAATTTCTTGTGGCATCTCTGGCATACTTACATTACTCCTTGTGAACAGTATCTCTGGCAT
TTCCACTCATCATTTCTGCTTAGCAGTTAGCCCTGATTTCATCCTGACATTAACTGCAGATAGTAGATGGAATTCCTTG-
CTCCTTCCGAAAGACGGGAAGTTGCTCGAAGACCACCAGAGGGAATCAGGACATGAGACCAGCTCTAGGGATTCCTCTGA
TTGAATCCACGTTGTTGTACAAGCCGGTAACATCGTTCTGTATTTAAAAAGTAATCCAGATGGAAGCAAGAGTATGTGCT
GTCCTCAAACTGTTTCTTGTCGCCGTAAATCATTGTCACGTTGATTTGTACTGACTATTTTGCACAATGGAAATAAAATT
ATTACATGGTATTGCTCTTAGCCGTAATTTATTTCCGCTTCATGTTTCTCTTTGCTGCTGTACCTTTATAGTGAACCTTG
CGTACTACTCCCTCCGTCACATAACATAAGGGCGTTTTTGACACTACAGGGGAG-------------ATAGCGTTTTGGC
TCTCGGCCTCCATGGAAGCCGATTTAAAAAAAAAATCAAACTAAAAAATTTCGGTTTCAAAACAATCTGAAATTTTTTGT
ACAAGTAAACAAGGATGTGAGGTGAA------------------------------------------------------
-----TCATGGTTTTGAAGGATGAATAGCATCATGTGTTAAAAAGCCCCATATTTGTCTTTTTTGCACAGCCCTCATTTC
AACGTATTTCGTCCTG-AAATTTACACACTTGTGCACTATGCCTTCATCTATCTCTGTAT-TTTTTTTCAGAATTTTTTG
AAATAAAATATGAATTTCCATGAATTTTGAATTT-------GGAGGCCTTCATGGAGCTCGGCCTCCAAAAGCAATTTCT
GGTAAAAAACGCTCTTATATTAGAGCATCTCCAGCCGCGCCCCAACAGGCCCTCCCTAGGCGTTTTTGCCACGCCGGCGC
CCAAAAATCGGCCCAGTCGCGCCTCCAGTAGCCCGTTTTTCGCCGGCTCGGGCCGAAACTGGTGCCGGCGGACCCGAGCC
GAACCCGGCGCGCTGGGGGGCGCCGGCACAAGCGAAAAGGGGCGTGGGGCCGCTCTGTCGACGAGTCGAGAGCCTCTTCC
CGCCGTTTCTTCCCGCTTTTCCCCCACTTCCCTCCCATTCTCTCCCTCCCGCTCGCCTCCCAGCCGGCCGCCATGCCGCC
GAAGAAGTACGTGATCCCCCGCGCCGCGACAACCGCGACCGCCTCCGTCGCCCAGCCGAAGCAGAGGAAGCCGAGGGCAC
CGCCGTCC
>chr1A_1
AGCTGGTCGTCCATGCTCAGAACCGACTGATGAAATGCCATGGCAATGTAAATCAGCAAGGCAACTAATGGGCTTTCAAG
TCGAGTGTTCGATCTTGGAAGTGCGAGC------------------------------AGCGCTCACCACGATCTTGGCC
GTGAGGGGATCGAAGCCGCAGCCACCGGAGGCGAAGCTGACGCCGGTGAGGAGGTCCGAGTCGCTGAGCTCCGTGCCGAG
GTACGCTGGCACGTACTGCTTCAGGCCCATCCGGGTGGCTGG----ATCAAATGCAAACCATCAGTTTCTG---------
----------TGCCATGCATACATGAACCGAGTAGCTAGAGAGAGTCGTCAATGGAGTGCCTGCCATGCATATACCCATA
CCGAGGATGTCGCCGACGATCTTGCCGTTGCTGAACCTGCCGGTGGCGTTGTGGGCGGGGAAGTCCTGGCCGTAGGGAGC
GAAGTCGCATCGCACCGCCGTGGTGAGGCCGTTGTTGTTGCCCGGGTCCACGATGGAGTCCCCGAACAGGATCAGCGCCG
GCGGCCGCGTCTGGCTCGAGCCCGGCTGGGAAGCGGCAGTGCAGCAGGAGGGACGCGCA---AGCATCAATGCCACGACT
GCTGTGGCGATGAGAATGAGGCGGCGCGTTGCTCCTCCGGCTCCGGGCGTGCATTCGCTGGCCATGGCCATGCCTGCTCC
GGTGTTGGTGCTGATCTCTGATCAGCTCACTCACACCACACG-------------CCTACCGCTGCTCTGTCCGATCGAT
GCTTCTCTTGTAGCCAGAGCGCATTGTAGTTATAGATAGAGAGACATTCAATCTCATCTTAACTTGTGTAATTCCCTCCC
CATTTCTTGCAAGATTGAGACTCCAAATTCACAAGTTTTGGCCACCTCGGTTAATGCAATTTTGTTGTTTCGTCAAGCGA
GGTGACACACGTCCGTGTGAGCATTGTCTTCGTTCTTTTAGCGG---AATCTTGGAATGGAAATTTTCGTGCCTACCCCA
ACCGTTCGCCACCTTCTAGAGATGGGCTGGGTTGTC-----TGAGCCGAGCGGATGGGGCAGGTTGGGCTTTCAAAGTTT
TGACCGGCCCGATCCACAACCCTGA-CAGGACGATGAGGCGGACCACGGCGTTGCTGCTGCGCCACGTCGGCGGCGGGAT
CCCGCAGGCGCTCGCCGACATGCTCGTCTGCCCCCTGTCCAAGAAGCCTCTCAGGTAGCCAAGCCAGGCAATATCTGGGC
CCTCCTACTTCCACACTACTCCCTTTGATTGATCTCGTCTCTTTCCTTTGCCCACCAGGTACTGCGAGGCCAGCGGCTCT
CTGGTCAGCGACGCCGTCGGCATGTCCTTCCCGGTGAGTTCCGGTGTCCCCTCCCGCTCCTCTATGTGCCGCGCTTGTTG
AATGCTTGGGCCTGCAACCCTCTGGTGGTTTTAGCCGGTATATTGCATGCTTGCGGCTTACCTGTTTGCTGTATTGCCTC
GGCGAAAATGGAAACACATTCATCATGTGCAAAACGAAAAGGGGGCCGATTTCCTAGCATCGCTACTTAATGGCACCATG
AAATCCGCAGTGGAGACTCAATTCAGGAAGTAGCTAGTGATAACTAGTCTTCACACAGCATGTCTTTGTGATTATCGAGA
ATTTGACTGTTTG--A--TGAAGTTTTTGAGCATGAGAGAGGATCATGTTACTAGAA-----------------------
--------------------------------------------------------------------------------
----------------------AGTACTACTGGTGTTAGCATGCTGGGATCAGCGCGTGTGCAGTGGCGTGT-GGGACAG
ACTCACATACTAGAG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------AGAGAAGGTGAGAGGAGAAAATGATTAAAGTGCACACATAATGGCTAACAACCAACTGATTTGATGTT
CTAAAACGGGGATATTTTACGTCAACTTTGAACTTTTAGGATAAACATGTTCCTATGGAATTTCAGGATCTCAATTTATT
GCTTCCTGTAGCATTTCATCAATTTCTTGTGGCATCTCTGGCATGCTTACACCACTCATTGTGAACAGCATCGCTGGCAT
TTCCACTCATCATTTCTGCTTAGCAGTTAGCCCTGATTTCATCCTGACATTAACTGCAGATAGTAGATGGAATTCCTTGT
CTCCTTCCGAAAGACGGCAAGTTGCTCGAGGACCACCAGAGGGAATCAGGACATGAAACCAGCCCTAGGGATTCCTCTGA
TTGAATCCACGTTGTTGTACAAGCCGGCAACATCGTTCTGTATTTAAAAAGTAATCGAGATGGAAGCAAGAGTATGTGCT
GTCCTCAAACTGTTTCTTGTCGCCGTAAATCATTCTCACGTTGATTTGTACTGACTATTTTGCACAATGGAAATAAAATT
ATTACATGGTATTGCTCTTAGCCGTAATTTATTTCGGCTTCATGTTTCTCTTTGCTGCTGTACCTGTAGAGTGAACCTTG
CGTACTACTCCCTTCGTCACATAATATAAGAGTGTTTTTGACACTACAATAGTGTAAAAAACGGAGAATAGTGTTTTGGC
TCTCGGCCTCCATGGAAGCCGTTCTTTTTTAATTC---------AAAATTTTGGTTTAAAAGAAATCTGAAAAAAATTGT
ACAAGTAAACAAGGATATGAGGCGTATGTGTGTAAAGTTTCAGGATGAAATGCGTTGAAATGCGACCTGTACAAAAAAGA
CAAATTCATGGTCTTGAAGGATGAATTGTATCATGTATTAAAAAGCCTTAGATTTGTCTTTTTTGCACCGCCCTCATTTC
AAAGTATTTCGTTCTGAAAATTTACACACTTGTGCACTATGCCTTCATCTATCTCTGTATTTG-TTTTCAGAATTTTTTA
AAATAAAATATGAATTTTCATGAATTTTGAATTTTGCATTTGAAGGCCTCCATGGAGCTCGGCCTCCAAAAGCAATTTCC
GGT-AAAAATGCTCTTATATTA----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>chr1B_1
AGCTGGTCGTCCATGCTCAGAACCGACTGATGAAATGCCACGGTGGAATGAGTTTATTTC--------------------
-----------ATCTTGGAAGTGGAGATAAA-CGATGTTCCTTCCCTGGGCAGGGCTGAGCGCTCACCACGATGTCGGCC
GTGAGGGGGTCGAAGCCGCAGCCACCGGAGGCGAAGCTGACGCCGGTGAGGAGGTCCGAGTCGCTGAGCTCCGTGCCGAG
GTACGCCGGCACGTACTGCTTCAGGCCTATCCGGGTGGCTGGCAGGATCAAATGCCAACCATCAGTTTCAATGCCTGCCA
TGCCATGCCATGCCATGCATGCTTGAACCTTACG-----------------------------------ATATACCCGTA
CCGAGGATGTCGCCGACGATCTTGCCGTTGCTGAACCTGCCGGTGGCGTTGTGGGCGGGGAAGTCCTGGCCGTAGGGCGC
GAAGTCGCACCGCACCGCCGTGGTGAGGCCGTTGTTGTTGCCCGGGTCCACGATGGAGTCCCCGAACAGGATCAGCGCCG
GCGGCCGCGTCTGGCTCGAGCTCGGCTGGGAAGCGGCAGTGCAGCAGGAGGGGCGCACA---AGCATCAATGCCACGAGT
GCTGTGATGATGAGAATGAGGCGGCGCGTTGCTCCTCCGGGTCCGGGCGTGCATTCACTGGCCATGGCCATGCCTGCTCC
GGTGTTGGTGCTGATCAGCTC---GCTCAGTCACACCACGCCTCCTCCTCCTCCTCCTGCTGCTGCTCTGTCCGATCGAT
GCTTCTCTTGTAGCCAGAGCGCATTGTAGTTATAGATAGAGAGACCTTCAATCTCATCTTAACTTGTGTAATTCCCTCCC
-ATTTCTTGCAAGATTGAGACGACACATTCACAAGTTTCGGCTACCTCGGTTAATGCATTTTTGTTGTTTCGTCAAGTGA
GGTGACCCGCGTACGTGTGAGCATTGTCTTCGTTTTCCTTGGCGGAAAATCTTGGAATGGAAATTTTCGTGCCTACCCCA
ACCGTTCGCCACCTTCTAGAGAT---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>chr1B_958
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------ACCTTCTAGAGATGGGCTGGGTTGTC-----TGAGCCGAACGGATGGGGCAGGTTGGGCTTTCAAAGTTT
TGACCGGCCCGATCCACAACCCTGA-CAGGACGATGAGGCGGACCACGGCGTTGCTGCTGCGCCACGGCGGCGGCGGGAT
CCCGCAGGCGCTCGCCGACGTGCTCGTCTGCCCCCTGTCCAAGAAGCCCCTCAGGTAGCCAAGCCAGGCAATATCTGGCC
CCTCCTACTTCCACACTACTCCCTTTGATTGATCTCGTCTCTTTCCTTTCCCCACCAGGTACTGCGAGGCCAGCGGCTCC
CTGGTCAGCGACGCCGTCGGCATGTCCTTCCCGGTGAGTTCCGGTGCCCCCTCCCGCCCCTCTATGCGCCGCGCTTGTTG
AATGCTTGGGTCTGCAACCCTCTAGAGGTTTTAGCCGCTATTC--CATGCTTGCGGCTTACCTGTTTGCTGTATTGCCTC
GGCGAACAAGGAAACACATTCATCATGTGCAAAGCGAAAAGGGGGCCGATTTCCTAGTATCGCTACTTAATGGCACCATG
AAATCCGCAGTACAGACTCAATTCAGGAAGTAGCTAGTGATAACTAGTCTTCACACAGCACGTCTTTGTGGTTATCGAGA
ATTTGACTGTTTGAGA--TGAAGTTTTAGAACATGAGAGAGGATCATGTTACTAGAAAGTACTCCCTCTGTCCGGAAATA
CTTGTCATCAAAATGAATAAAAGTAGATGTATCTAGATGTATTTTAGTTCTAGATACATCCCCTTTTGTCCATTTTGATG
ACAAGTATTTTCAGACGGAGGGAGTACTACTGGTGTTAGCATGCTGGGATCAGCG--------------TGT-GGGACAG
ACTCACATACTAGAGAGAGAAGGCGAGAGGAGAAAATGATTAAAGTGCACATATAATGGCTAACAACCAACTGATTTGAT
GTTCTGAAACAGGGATATTTTATGTCAACTTTGAACTTTTAGGATAAACATGTTCCTATGGAATTTCAGGATCCCAATTT
ATTGCTTCCTGTAGCAATTCATCAATTTCTTGTGGCATCTCTGGCATACTTACACCACTCCTTGTGAACAGCATCTCTGG
CATTTCCACTCATCATTTTTGCTTAGCAGTTAGCCCTGATTTCATCCTGATATTAACTCCAGATAGTAGATGGAATTCCT
TGTCTCCTTCCGAAAGGCGGGAAGTTGCTCGAGGACCACCAGAGGGAATCAGGACATGAAACCAGCTCTAGGGATTCCTC
TGACTGAATCCAAGTTGTTGTAGTATTAAAAGATAATCGAGATGGAAGCAAGAGTATGTGCTGTCCTCAAACTGTTTCTT
GACGCCGTAAATCATTGCCACGTTGATGTGTACTGACTATTTCGTGCAATGGAAATAAAATTATCACATGGTATTGCTCT
CACATACTAGAAAGAGAAGGTGAGAGGAGAAAATGATTAAAGTGCACATATAATGGCTAACAACCAACTGATTTGATGTT
CTGAAACGGGGATATTTTACGTCAACTTTGAACTTTTAGGATAAACATGTTCCTATGGAATTTCAGGATCTCAATTTATT
GCTTCCTGTAGCATTTCATCAATTTCTTGTGGCATCTCTGGCATACTTACACCACTCATTGTGAACAGCATCTCTGGCAT
TTCCACTCATCATTTCTGCTTAGCAGTTAGCCCTGATTTCATCCTGATATTAACTCCAGATAGTAGATGGAATTCCTTGT
CTCCTTCCGAAAGACGGCAAGTTGCTCGAGGACCACCAGAGGGAATCAGGACATGAAACCAGCTCTAGGGATTCCTCTGA
TTGAATCCACCTTGTTGTACAAGCCGGCAACATCGTTCTGTATTTAAAAAGTAATCGAGATGGAAGCAAGAGTATGTGCT
GTCCTCAAACTGTTTCTTGTCGCCGTAAATCATTGTCACGTTGATTTGTACTGACTATTTTGTACAATGGAAATAAAATT
ATTACATGGTATTGTTCTTAGCCGTAATTTATTTCCGCTTCATGTTTCTCTTTGCTGCTGTACCTGTATAGTGAACCTTG
C-TACTACTCCCTCCGTCACATAATATAAGAGTGTTTTTGACACTACAG-------------------------------
---------------------------------------------------------------------------TTTGT
ACAAGCAAACAAGGATGTGAGGCGTATGTGTGTAAAATTTCAGAATGAAATACATTGAAATGCGACCTGTACAAAAAAGA
CAAATTCATGGTCTTGAAGGATGAATAGTATCATGTGTTAAAAAGCCCCAAATTTGTCTTTTTTGCACAATCCTCATTTC
AACGTATTTCGTCCTGAAAATTTACACACTTGTGCACTATGCCTTCATCTATCTCTGTATTTTTTTTTCAGAATTTTTTG
AAATAAAATATGAGTTTTCATGAATTTTGAATTTTGCATTTGGAAGCCTCCATGGAGCTCGGCCTCCAAAAGCAATTTCC
GGTCAAAAACGCTCTTATATTA----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>SNPs
--------------------------------------------------------------------------------
-------------------------------S--------------------------SS--------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------SSSSSS------------------
-----S----------------------------------------S-----------S---------------------
-----S--------------------------------------------------------------------------
---------S----S-------S-SS----------------S-------------------------------------
----------------S-----------S---------------------------------------------------
----------------------S---------S------------------------S----------------S-----
-----------------------------------SSSSSS---------S-----SS------------------SSS-
-S--------------S--SS--SSS------------------------------------------------------
---------------------------------------------------------------S----------------
---------------S---------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S--------------S------S--SS--S-----------------------------S-SS--SSS----SS-S---S
----S-----S------------------------S-----------------S-------S---S-S------------
----S-----------SS-----------------S----S-S--S-S----S-S-S-----------------------
--------------------------------------------------------------------------------
----------------------------------------------------S--------------S----S-------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-SS-S--------------------------------------------------------------
-------S-----------S------------------------------------------------------------
---------------------------------------------------SS----S----------S-----------
--------------------------------------------------------------------------------
-----------------S-----------S--------------------------S-----------------------
---------------------------S----------------------------S-----------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
------------------------S-----S-S----------------SS-S------------------S--------
---------------------S-S-SSSSS--SSSSSSSSSSSS-------S-----S---SS---------SSS-----
----------------------S-S-------------------------------------------------------
------------S---------------S---------------------S-----------------------------
--------------------------------------------------------------------------------
-----------------S-------------------------------S-----------------------------S
---S------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS
>forward_646
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TCAATGCCACGAGT
GCTGTT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>reverse_1908
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TGTGTGGGGACAG
ACTCACA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>forward_1117
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CGCAGGTTGGGCTTTCAAAA---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>reverse_3856
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------CTTTTCCCCCACTTCCCTCC---------------------------------------------
--------------------------------------------------------------------------------
--------
