>input_sequence_59677
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--------------------------------------------------------------------ATGGACTCCCTC
TCCCTGTACGAGATCTCCTGCTTCGCCGCCGGGTTCGCCGGCAACCTCTTCGCCTTCGCTCTCTTCCTCTCCCCAGTGTA
AGCATGCTATATACATGGATGGCGCTGGTTTTG-----TTGGCTTGATCGTCGTGGAGAGGGGTTTCTGACGACGCGTTT
GTGTTTCGTGTTGTCGCCTTTTTCAGGCCGACCTTCAAGAGGATCCTCAAGGCCAAGTCCACGGAGCAGTTCGACGGGCT
CCCCTACCTGCTCTCCCTGCTCAACTGCTTCATCTGCCTCTGGTATGGCCTCCCCTGGGTCTCCGACGGCCGGCTGCTCG
TCGCCACCGTCAACGGCACCGGCGCCGCGTTCCAGCTCGCCTACATTTCTCTCTTCTTCATCTACGCCGACAGCAGAAAG
ACCAGGGTAATTTCCTTCCCGTCCTGAACCCCGTTGCACTTTCATCATCTCAGAAAACCAGTCAAACAGGGAACAACAAC
TGCAATACTTCTTCCTGTACTGAAATCTGCTATCCA-TCTGCTCCACAGCTGAGGATGGTAGGGCTCCTGGCTCTCCTGG
TCTGCGCGTTCGCCCTCGTCGCGCACGCGAGCATCGCTTTCTTTGACCAGCCGACTCGGCAGCAGTTCGTCGGCGCCGTG
AGCATGGCGTCGCTCATCTCCATGTTTGCTTCCCCACTAGCCGTCATGGTACGCA---------------GCTCCTCATG
AAAATTTCTCCTACCTAGATCATCCCTTTTGGACTACGTACGCGATCGGCGCGCAACAGCGTGACATGGAACTGTTCTCA
CGCATGTCTTCATCGCTGCTTCTTCAGGGCGTGGTGATCAGGACGGAGTGCGTGGAGTTCATGCCCTTCTACCTCTCGCT
CTCTACATTGCTCATGAGCGCCTCTTTCGCGGTCTATGGAGTGCTGCTGCGTGATCTCTTCATCTACGTAAGCACCCGAT
CCGATTTCAAATTGCATTTTTTTACTTGAATCGATGTAT------------------TGTGCTGACGATTACACTTCTTG
CCGTCTGAATTTTCAGCTGCCCAACGGACTTGGAGTTGTCCTGGGAGCAACGCAGTTGGCGCTCTACGCTTACTACAGCC
GGAAATGGAGATGCAAGGATACGTCTGCGCCGTTGCTTGCCTGA------------------------------------
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>chr3A_1_TraesCS3A01G255300
CCCCGATTTTGAGAAGCTGTGTCTGAAAGATGGCGTGTCTTAGCCACTTATATTTGGCTCAACTGATGACTCATCTTCAC
AAGTTTTGAGCATGGAATTCCCAAACCGCTGCATTTCTCCGTGCTGAATTTCGTTTGGTCATTCTAAGCATCGACATGGC
GAGGCGTGTCAGCCTCAAACGCACCTTTTGTCATCCGCTCCGCTTCTCAGAGGTGCTGTCGGCCGTCCAATCTTCTGGTT
G-CTAGGGCCGGAGACCGCTGGGTCAAATGACGGCCAAGCAAG-CGGTGGCCATCCAAACTTTTCGGCCACAAGTTCAAA
GAGTGACTTGGCCGATTTGTGTTCACGGCGATGATCGGCGATCCGACCTATCAACCACTTGGACGCCATTACCTCAAAAA
ATGAAAAA-------------AACTACCTGGACGCCAGGAAAGATTCTTCAGATCCTACCGCAGAAAACGATAGCCTGTA
GATAGCTGGTACTACTACTACCTCTGTTCACTTTTATAAGACGTTTTAGACATTCAGACACTGTCCAAAACAGTACAAAG
CAAGCTGTCTGAAACGTCTTACAAAAACAAACGGAGGGAGTAGTAAATTTCATTTTTTTTTCGTAAAAGCTACTCCAGTA
ATGATCTTGCCAGTGCGTCAGTAATGAGCTAGTTGACAAAAAAACACATTCATGCCACTGCGGACCACGTCCATGCGATA
CACGACAGTGAGAGGGAGCCCCGGTGTCAGCAGAGGCGAGACAAGTTGCTGGTTAACTGATATGAGTGGAGACGCGTGCT
CGCAGTCGTCTCCCGTTCCATAGGCGCGAAGAAA---ATAAATGAAGAGGCGCGTTCCCAGGGCTAGGTTGCCGATGATT
CAACCATACAACCCAACTTGTGGCTGTGGGGTTTTGGCTCGTGCCGTGCAGCCCGCTACAAAAGCCACGGCG----TTAC
AGTGCTGTGGAGGCAGACGTGGAAAAGCTAAGG------TACAAGGAGGCTTCTTCAATCTTTCATCCATGGACTCCCTC
TCCCTGTACGAGATCTCCTGCTTCGCCGCCGGGTTCGCCGGCAACCTCTTCGCCTTCGCTCTCTTCCTCTCCCCAGTGTA
AGCATGCTATATACATGGATGGCGCTGGTTTTG-----TTGGCTTGATCGTCGTGGAGAGGGGTTTCTGACGACGCGTTT
GTGTTTCGTGTTGTCGCCTTTTTCAGGCCGACCTTCAAGAGGATCCTCAAGGCCAAGTCCACGGAGCAGTTCGACGGGCT
CCCCTACCTGCTCTCCCTGCTCAACTGCTTCATCTGCCTCTGGTATGGCCTCCCCTGGGTCTCCGACGGCCGGCTGCTCG
TCGCCACCGTCAACGGCACCGGCGCCGCGTTCCAGCTCGCCTACATTTCTCTCTTCTTCATCTACGCCGACAGCAGAAAG
ACCAGGGTAATTTCCTTCCCGTCCTGAACCCCGTTGCACTTTCATCATCTCAGAAAACCAGTCAAACAGGGAACAACAAC
TGCAATACTTCTTCCTGTACTGAAATCTGCTATCCA-TCTGCTCCACAGCTGAGGATGGTAGGGCTCCTGGCTCTCCTGG
TCTGCGCGTTCGCCCTCGTCGCGCACGCGAGCATCGCTTTCTTTGACCAGCCGACTCGGCAGCAGTTCGTCGGCGCCGTG
AGCATGGCGTCGCTCATCTCCATGTTTGCTTCCCCACTAGCCGTCATGGTACGCA---------------GCTCCTCATG
AAAATTTCTCCTACCTAGATCATCCCTTTTGGACTACGTACGCGATCGGCGCGCAACAGCGTGACATGGAACTGTTCTCA
CGCATGTCTTCATCGCTGCTTCTTCAGGGCGTGGTGATCAGGACGGAGTGCGTGGAGTTCATGCCCTTCTACCTCTCGCT
CTCTACATTGCTCATGAGCGCCTCTTTCGCGGTCTATGGAGTGCTGCTGCGTGATCTCTTCATCTACGTAAGCACCCGAT
CCGATTTCAAATTGCATTTTTTTACTTGAATCGATGTAT------------------TGTGCTGACGATTACACTTCTTG
CCGTCTGAATTTTCAGCTGCCCAACGGACTTGGAGTTGTCCTGGGAGCAACGCAGTTGGCGCTCTACGCTTACTACAGCC
GGAAATGGAGATGCAAGGATACGTCTGCGCCGTTGCTTGCCTGATCAAACCTCAAGTGATCAGTTCTCAGTTTTAGCTTG
GCTAGAAAGGGTGGGTGTGGGGTTCTGTAGGAGAGAATTGTATGCCCCGGCCCTGTTTTCCCTAGTTGATGCTGAATCAG
CTTGTACAGATTTGCTGGCCTATGCCTCTGTTTATATGTTGCTCAAG--TATCATTCTTTTCCCAAAGAATGCAGAGGAG
GGGGATATTTTGTTTGATTCCCCCTTTGTTATGAAATGTTTCTCCACACAAATATTTCAATTCTGGGCCCGATCAGCTTG
GTTAATAGCCCGATCAATTTTTTTGGCAAGATCCTTGCCACAAGACTTGCTATGGAGCTTCCGAAGCTCGTGGGATGCCA
CCAAAGCGCGTTTACCAAAGGG--CGTTCTCTCCACGATAACTTCATGCTCGTGCAATGCACGGCACGACGCATGCATGC
TTTGAGGAACCCAGCGGCCCTGCTCAAACTCGACATCACCAAAGCATTTGACTCCATACAGTGGCCGTTCTTGATCGAAG
TCTAGCGTAGACTAGGCTTTGGACACAAGTGGCTAACCTGGATCTGTGGACTCCTAGCCACCTCCTCCACGCGGATCATG
ATTAATGGCCGTCCCGG-CAAGCCAATCTTGGCGTGTCAAGGTTTCAGACAAGGGGACCCGCTGTCGCCGATGCTATTCA
TTCTCTGTATGGAACCCCTCTATGCACTCTTCCAACATGCTTCTGAGCATGGCCTTCTAGCACCATTGGCTCGTTCTGGC
ATGCAGCAGTGTGTCTCCATGTTTGCGGATGACGTCGTGGTCTTCATGAAGCCAACTGAACTTGAGGCAGCCACCTCCAG
GGTGATCTTGCACCTGTTTGGCCAAGCTTCCGGTTTGTCTGTCAATATGGCCAAGAGTACGGTGCTCCCCATTAGATGTT
CCCAGGACAAGATCGAGCTACTATCCACTATGTTGGGATGCCCTACTGCTCCTTTTCCGTGCAAATATTTGGGTCTGCCG
TTGACACTT
>chr3D_1
CCCCGATTTTGCGAAGCAGTGTCTGAAAGATGGCGTGTCTTAGCCACTTATATTTGGCTCAACTGATGACTCATCTTCAC
AAGTTTTGAGCATAGAATTGCCAAACCGCTGCATTTCTCCTTGCTGAATTCCATCTGGTCATTCTAAGCAGTGACATGGC
GAGGCGTGTCAGCCTCAAACGCGCCTTTTGTCATCCGCTCCGCTTCTCAGAGGTGCTGTCGGCCGTCCAATCTCATGGCT
GCCTAGGGCCGGAGACCGATGGGTCAAATGACGGCCAAGCAAG-CGGTGGCCATCCAACCTTTTCGGCCACAAGTTCAAA
GAGTGACTTGGCCGATTTGTGTTCATGGCGATGATCCGCTATCCAACCTATCAACTACCTGGACGCCATTACCTAAAAA-
---AAAAA-------------CCCTACCTGGACACCAGGAAAGATTCTTCAGATCCGACCGCAGAAAACGATAGTCTGTA
GATAGCTGGTAGTAAATT--------------------------------------------------------------
----------------------------------------------------TTATTTTTTCGTAAAAGCTA-----GTA
ATGATCTTGCCAGTGCGCCAGTAATGAGCTAGTTGACAAAAAAACACGTTCATGCCGCTGCGGACCACGTCCATGCGATA
CACGACAGTGAAAGGGAGCCCCGGTATCAGCAGAGGCAAGACAAGTTGCTGGTTAACTGAT--GAGTGGAGACGCATGCT
CGCAGTCGCCTACCGTTCCATAGGCGCGAA-AAATAAATAAATGAAGAGGCCGGTTCCCAGGGCTAGGTTGCCGATGATT
CAACCATACAATCCAACTTGTGGCTGTGGGGTTTTGGCTCGTGCCGTGCCGCCCGCTACAAAAGCCACGGGG----TTAC
ATTGCTGAGGAGGCAGACGTGGAAAAGCTAAGG------TACAAGGAGGCTTCTTCAATCTTTCATTCATGGACTCCCTC
TCCCTGTACGAGATCTCCTGCTTCGCCGCTGGCTTTGCCGGCAACCTCTTCGCCTTCGCTCTCTTCCTGTCCCCAGTGTA
AGCAT---ATATACATGCATGCTGTTTGCCTCGCCCCCTTGTTTTGATCATGGTGGAGAGAGGTTTCTGACGACGGATTG
TGTTG---------TTGCCTTTTCAGGCCGACCTTCAAGAGGATCCTGAAGGCCAAGTCCACGGAGCAGTTCGACGGGCT
CCCCTACCTGCTCTCCCTGCTCAACTGCTTCATCTGCCTCTGGTATGGCCTCCCCTGGGTCTCCGATGGCCGGCTGCTCG
TCGCCACCGTCAACGGCACCGGCGCCGCGTTCCAGCTCGCCTACATTTCTCTCTTCTTCATCTACGCCGACAGCAGAAAG
ACCAGGGTAATTTCCTTCCCGGCCTGAACCC-GTTTCACTTTCATCTCAG-----AAACACTCCAACGGGGAACAACAAC
TGCAATACTA-TTCCTGTACTGAACTCTGTTATCCA-TTTCCTCCACAGCTGAGGATGGTAGGGCTCCTGGTTCTCCTGG
TCTGCGCGTTCGCCCTCGTCGCGCACGCGAGCATCGCCTTCTTCGACCAGCCGACTCGGCAGCAGTTCGTCGGCGCCGTG
AGCATGGCGTCGCTCATCTGCATGTTTGCTTCCCCGCTGGCCGTCATGGTACGCCGTCCGCTCAACCTGGGCTCCTCATC
AAAATTTCTCCTACCTAGATCATCCTTTTTGGAGTACGTACGCCATCGGCGCGCAACGGCGTATCATGGAACTGTTCTCA
CACATGTCTCCATCGTTTCTTCTTCAGGGAGTGGTGATCAGGACGGAGTGCGTGGAGTTCATGCCCTTCTACCTCTCGCT
CTCTACGCTGCTGATGAGCGCCTCTTTCGCGGCATACGGAGTGCTGCTGCGTGATCTCTTCATCTACGTAAGCGCCCTAT
CCGATTTCAAATTCAA----TTTGCTTGAATCGATGTATCTGTGGGAATGCA-----TGTGCTGACAATTGGACTTCTCG
CCGTCTGAATTTTCAGCTGCCCAACGGGCTTGGAGTTGTCCTGGGAGCAACGCAGTTGACGCTCTACGCTTACTACAGCC
GCAAATGGAGATGCAAGGATACGTCTGCGCCGTTGCTTGCCTGATCAAAGCTCAAGTGATCAATTCTCAGTTTTAGCTTG
GCTAGAAAGGTTGGGTGTGGGGTTCTGTGGGAGAGAATTGTATGCCCGGGCCCTGTTTTCCCTAGTTGATGCTGAATCAG
TTTGTACAGATTTGCTGGCCTACGCCTCTGTTTATATGTTGCTCAAGTATATCATTCTTTTCCCAAAGAATGCAGAGG--
GGGGATATTTTGTTTGACTCCCCCTTTGTTATGAAATGTTTCTCCACACAAATATTTCAATTCTGG--------------
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>chr3B_1
CCCCGATTTTGCGAAGCAGTGTCTGAAAGATGGCGTGT---AGCCACTTATATTTGGCTCAACTGATGACTTATCTCCAC
AAGTTTTGAGCATAGAATTGCCAAACCACTGCATTTCTCCTTGCTGAATTCCATCTGGTCATTCTAAGCAGTGACATGGC
GAGGCGTGTCAGCCTCAAACGCGCCTTTTGTCATCCGCTCCGCTTCTCAGAGGTGTTGTCGGCCGTCCAATCTTCTGGTT
GCCTAGGGCCGGAGACCGTTCGGTCAAATGACGGCCAAGCAAGCCGGTGGCCATCCAACCTTTTCGGCCACAAGTTCAAA
GAGTGACTTGGCCGATTTGTGTTCATGGCGATGATCCGCGATCCGACCTATCAACTACCTGGACGCCATTACCTCAAAA-
---AAGAAAAAAGAAAAAAGAAACTACCTGGACACCAGGAAAGATTCTTCAGATCCAACCGCAGAAAACGATAGTCTGTA
GATAGCTGGTAAATT-TT--------------------------------------------------------------
----------------------------------------------------ATTTTTTTTCGTAAAGCCAGCAG-----
-TGATCTTGCCAGTGCGTCAGTAATGAGCTAGTTGACAAAA-AACACATTCATGCCACTGCGGACCACGTCCATGCGATA
CACGACAGTGAAAGGGAGCCCCCGTATCAGCAGAGGCAAGACAAGTTGCTGGTTAACTGATATGAGTGGAGACGCATGCT
CGCAGTC---TCCCGTTCCATAGACGCGAA-AAA---ATATATGAAGAGGCGCGTTCCCAGGGCTAGGTTGCCGATGATT
CAACCATACAATCGAACTTGTGGCTGTGGGGTTTTGGCTCGTGCCGTGCCGCCCGCTACAAAAGCCACGGCCGGGTTTAC
AGTGCTGAGGAGGCAGACGTGGAAATAGCCAAGATACAATACAAGGAGGCTCCTTCAATCTTTCATTCATGGACTCCCTC
TCCCTGTACGAGATCTCCTGCTTCGCCGCTGGGTTTGCCGGCAACCTCTTCGCCTTCGCTCTCTTCCTCTCCCCAGTGTA
AGCATGT--TATAAATGGATGTTGCTGGTTTCG-----TTGGTTTGATCATCGTGGAGAGAGGTTTCTGACGACGGGTTT
GTGTTTCGTGTTGTTTGCCTTTTCAGGCCGACCTTCAAGAGGATCCTCAAGGCCAAGTCCACGGAGCAGTTCGACGGGCT
CCCCTACTTGCTCTCCCTGCTCAACTGCTTCATCTGCCTCTGGTATGGGCTCCCCTGGGTCTCCGACGGCCGGCTGCTCG
TCGCCACCGTCAACGGCACCGGCGCCGCGTTCCAGCTCGCCTACATTTCTCTCTTCTTCATCTACGCCGACAGCAGAAAG
ACCAGGGTAATTTCCTTCCCGTCCTCAACCC-GTTCCACTTTCATCTCGG-----AAACAGTCCAACGGGGAACAACAAC
TGCAATACTTCTTCCTGTACTGAATTCTGTTACCCGTTTTCCTCCACAGCTGAGGATGGTAGGGCTCCTGGTTCTCCTGG
TCTGCGCGTTCGCCCTCGTCGCGCACGCGAGCATCGCCTTCTTCGACCAGCCGACTCGGCAGCAGTTCGTCGGCGCCGTG
AGCATGGCGTCGCTCATCTCCATGTTTGCTTCCCCACTAGCCGTCATGGTACGCCGCCCGATCAATCTGGGCTCCTCATC
AAAATTTCTCCTACCTAGACAT-------------------------------------------------CTGTTCTCA
CACATGTCTCCATCGTTGCTTCTTCAGGGCGTGGTGATCAGGACGGAGTGCGTGGAGTTCATGCCCTTCTACCTCTCGCT
CTCTACGCTGCTCATGAGCGCCTCTTTCGCGGTATACGGACTGCTGCTGCGTGATCTCTTCATCTACGTAAGCACCCTAT
CCGATTTCAAATTGCATTTTTTTACTTGAATCGATGTATCTGTCGGATCGGAATGCCTGTGCTGACGATTGGACTTCTTG
CCGTCTGAATTTTCAGCTGCCCAACGGGCTTGGAGTTGTCCTGGGAGCAACGCAGTTGGCACTCTACGCTTACTACAGCA
GGAAATGGAGATGCAAGGATTCATCTGCGCCGTTGCTTGCCTGATCAAACCTCAAGTGATCAATTCTCAGTTTTAGCTTG
GCTAGAAAGGGCGGGTGTGGGGTTCTGTAGGAGAGAATTGTATGCCCCGGCCCTGTTTTCCCCAGTTGATGCTGAATCAG
TTTGTACAGATTTGCTGGCCTACGCCTCTGTTTATATGTTACTCAAGT--ATCATTCTTTTCCTGAAGAATGCAGA-G--
GGGGATATTTTGTTTGATTCCCCCTTTCTTATGAAATGTTTCTCCACACAAATATTTCAATTCTGGGC------------
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>chr5D_2390
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----------------------------------------------------------AATTCTGG--CCGATCAGCTTG
GTAAATGGCCCGATCAATTTTTTTGACAAGATCCTAGCCACAAGACTTGCGGTGGAACTTCCGAAGCTTGTGGGATGCCA
CCAAAGCGCATTTGTCAAAGGG--CGTTCCCTCCACGATAACTTCATGCTCGTGCAATGCACGGGTCGACGCCTACATGC
TTTAAGGAGTCCGGCAGCCCTGCTCAAGCTCGACATTACTAAAGCTTTTGACTCTATTCAGTGGCCGTTCCTGATCGAGG
TCCTGCATCGGATGGGTTTTGGCCACAAGTGGCTGACCTGGATCTGTGGACTGCTCGCTACCTCCTCCACGCGTGTCATG
ATAAATGGCCGCCCAGG-CAAACCAATTCTGGCATGTCAAGGCTTTAGGCAAGGTGATCCTTTGTTGCCAATGCTTTTCA
TCCTTTGTATGGAGCCCCTCTATGCGCTTTTCCAGTTTGCTGCCGAGCATGGCCTTCTTGCTCCCTTGGCTCGATCTGGC
ATGCAACAACGCGTCTCCATGTTTGCGGACGATGTGGTGGTCTTCATCAAGCCAACTGAACTTGAGGCTGCAACCTGCAG
CGCGATCTTGACTCTGTTTGGCCAGGCTTCTGGGTTGTCTGTCAATCTGGCCAAGAGCTCGGTTCTTCCCATTCGATGTT
CTCCTGAGGAGATTGAGCTTCTAACTTCCATGCTGGGATGCCCTTTGGCCGCTTTCCCGTGCAAGTACTTGGGTCTGCCG
TTGACACT-
>chr2B_2391
ATTTTC--------------------------------------------------------------------------
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----------------------------------------------------------------GG--CCCATCAACTTG
GTTAATAGCCCGATCAAAATATTTGACAAGATCCTTGCTACAAGACTTGCTATGGAGCTTCCAAAGCTTGTGGGATGCCA
CCAAAGCGCATTCGTCAGAGGG--CATTCCCTCCATGATAACTTCATGATTGTGCAATGCACGGCACGGTGTCTGCATGC
TTTGAGGATCCCAATGGCCCTGCTCAAACTCGACATCACCAAAGCTGTTGACTCCATACAGTGGCCGTTCTTGCTCGAGG
TCTTGCGTAGACTGGGTTTTGGAGATAAGTGGTTGATCTGGGTCTGTGGACTCCTTGCCACCTCCTCCACGCGGATCATG
ACTAATGGCCG-TCCCGGCAAGCCAATCTTGGCATGCCAAGGTTTCAGACAAGGGGACCCGCTATCGCCGATGCTATTCA
TTCTCTGCATGGAACCCCTATATGCTCTCTTCCGGAATGCTACTGAGCATGGCCTTCTAGCTCATTTGGCTCGTTCTAGC
ATGCATCAGCGTGTCTCCATGTTTGCGGACGACATTGTGGTTTTCATCAAGCTATCTGAACTTGAGGCGGCCACCTGCAC
GGCAATCTTGCGCCTATTTGG-CAAGCTTCCAGCTTGCATGTCAATATGTCCAAGAGTTTGGTGCTCCCCATTAGATGTT
CCCAAGATGAGATTGAGATGCTATCCACTATGTTGGAATGCCCAGCTGCTCCTTCTCCATGTAAGTATTTGGGTCTGCCG
TTGACACTT
>chr3D_2400
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--------------------------------------------------------------------CCGATCATCTTG
GTTAATGGCCCGATCAATTTTTTTGACAAGATCCTTGCCACAAGACTTGTTGTGGAGCTTCCAAAGCTCATGGGATGCCA
CCAAAGCGCCTTTGTCAAAGGG--CGTTCTCTCCACGATAACTTCATGCTCGTGCAGTGCACGGCACGGCGCCTGCAT-C
TTTGAGGAATCCAACGGCCCTGCTCAAACTCGACATCACCAAAGCATTTGACTCCATACAGTGGCCGTTCTTGATTGAGG
TCTTGCGTCGACTAGGCTTTGGACACAAGTGGCAGACTTGGATTTGTGGACTCCTAGCCACCTCCTCCACGCGGATCATA
ATTAATGGCTGACCCGG-CAAGCCAATCTTGGCGTGTCAAGGTTTCAGACAGGGTGACCCGCTGTCGCCGGCGCTATTCA
TCCTCTGCATGGAACCCCTCTATGCACTCTTCCAGTATGCTTCTGAGCATGGCCTTCTAGCACCTTTGGCTCGTTCTGGC
ATGCAGCAGCGTGTCTCCATGTTTGCGGATGACGTCGTGGTCTTCATCAAGCCAACTGAACTTGAGGCATCCACCTGCAG
GACGATCTTGCATCTGTTTGGCCAAGCTTCTGGTTTGTCTGTCAATATGGCCAAGAGTACGGTGCTCCCCATTAGATGTT
CTCAAGACGAGATCGAGCTTCTGTCCACTATGTTGGGATGCCTTATTGCTCCTTTTCCGTGCAAATATTTGGGTCTGCCG
TTGACACTT
>chr7D_2400
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--------------------------------------------------------------------CCGATCAGCTTG
GTTAATAGCACGATCAATTTTTTTGACAAGATCCTTGCTACAAGACTTGCTGTGGAGCTTCCGAAGCTCGTGGGATGCGA
CCAAAACGCATTTGTGAAAGGG--TGTTATCTCCATGATAACTTCATGCTTGTGCAGTGCACGGCACAGCGCCTGCATGC
TTTGAGGAATCCAGCGGCCCTGCTCAAACTCGACATCACCAAAGCATTTGACTCCATACAGTGGCCGTTCTTGATCGAGG
TCTTGCGTCGACTGGGCTTTGGACACAAGTGCCTGACTTGGATTTTTGGACTCCTAGACACCTCCTCCACGCGGATCGTG
ATTAATGGTCG-CCCGG-CAAGCCAATCTTGGTGTGTCAAGGCTTTAGACAAGGAGACCCACTGTCGCAAATGCTATTCA
TCCTCTGCATGGAACCCCTCTATGCACTCTTCCAGTATGCTTCTGAGCATGGCCTTCTAGCACCTTTGGCTCGTTCTGGC
ATGCAACCGCGTGTCTCCATGTTTGCGGATGACGTCGTGGTCTTCATCAAGTCAACTGAACTTGAGGCAGCCACCTGCAG
GACGATCTTGCGTCTGTTTGGCCAAGCTTCCGGTCTGTCAGTCAATATGGCCAAGAGTACGGTGCTCCCCATTAGATGTT
CTCAAGACGAGATCAAGCTTCTTTCCACTATGTTGGGATGCCCTACTGCTCCTTTTCCGTGCAAATATTTGGGTCTGCCG
TTGACACTT
>chr7D_2400
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--------------------------------------------------------------------CCGATCAGCTTG
GTTAATGGCCCGATCAATTTTTTTGACAAGATCCTTGCCACAAGACTTGCGGTGGAACTTCCGAAGCTCGTGGGATGCCA
CCAAAGCGCGTTTGTCAAAGGG--CGTTCTCTCCACGATAACTTCATGCTCGTGCAATGCACGACACGGCGCTTGTATGC
TTTGAGGAGTCCAGCGGCCCTGCTCAAACTCGACATTACTAAAGCTTTTGACTCTATACAGTGGCCGTTCTTGATCGAGG
TCTTGCGTCGACTGGGTTTTGGCCACAAGTGGCTGACTTGGATTTGTGGACTGCTAGCCACCTCCTCCACGCGGATCATG
ATTAATGGCCG-CCCCG-CAAACCAATCTTGGCGTGTCAAGGCTTCAGACAAGGTGATCCACTGTCGCCGATGCTATTCA
TCCTCTGCATGGAACCCCTCTATGCACTCTTCTAGTATACTTCTGAGCATGGCCTTCTAGCACTGTTGGCTCGATCTGGC
ATGCAACAGCGTGTCTCCATGTTTGAGGATGATGTCGTGGTCTTCATCAAGCCAACTGAACTTGAGGCTACCACCTGCAG
GGCGATCTTGAATCTGTTTGGCCAAGCTTCCGGTTTGTCTGTCAATATGGCCAAGAGTATGGTGCTTCCCATTCGATGTT
CTGATGACGAGATTGAGCTTCTATCCACTATGCTGGGATGCCTTACCGCTCCTTTCCCGTGCAAATATTTGGGTCTGCTG
TTGACACTT
>chr2A_2400
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--------------------------------------------------------------------CCGATCAGCTTG
GTTAATAGCCCAATCAAAATATTTGACAAGATCCTTGCCACAAGACTTACTGTGGAGCTTCCGAGGCTTGTGGGATGCCA
CCAAAGTGTGTTCGTCAAAGGG--CGTTCCCTCCACGATAACTTCATGCTCGTGCAATGCACAACACGACGCCTGCATGC
TTTGAGGAACCCAACGGCCCTACTCAAACTCGACATCACCAAAGCATTTGACTCCATACAATGGCCATTCTTGTTCGAGG
TCTTGCGTAGACTGGGTTTTGGAGACAAGTGGCTGACCTAGATCTGTGGACTCCTATCCACCTCCTCCATGCGGATCATG
ATTAATGGTCG-TCCCGTCAAGCCAATTTTGGTGTGTCAAGGCTTCAGATAAGGGGACCCACTGCCGCCGATGCTATTCA
TTCTCTGCACGGAACCCCTCTATGCACTCTTCCAGTATGCTACTGAGCTTGGCCATCTAGCACCTTTGGCTTGTTCTAGC
ATGCAACAGCGTGTCTCCATCTTTGCTGATGACATTGTGGCTTTCATCAAGCCAACTGACCTTGAGGTGGCCATCTGCAG
GGCGATCTTGCGCCTGTTTGGCCAAGCTTCCGGTTTGTCTGTCAATATGGCCAAGAGTACGGTGCTCCCCATTAGATGTT
CCCAGGACGAGATCAAGCTGCTGTCCACTATGTTGGGATGCCCTACTGCTCCTTTTCCGTGCAAATATTTAGGAGTGTCA
ATGACACTT
>chr5B_2400
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--------------------------------------------------------------------CCGATCAGTTTG
GTTAATGGCCTGATTAAAATTTTCGACAAGATCCTTGGCACAAGACTTGCGGTGGAACTTCCGAAGCTTGTGGGATGCCA
CCAAAGCGCGTTTTTCAAAGGGCA--TTCCCTCCACGATAACTTCATGCTCGTGCAATGCATGGCTCGACACCTTCATGC
TTTACGGAGTCCTGCAGCCCTGCTCAAGCTCGACATTACTAAAGCTTTCGACTCTATTCAATGGCCATTCCTGATCAAGG
TCCTGTGTCGTATGGGCTTTGGCCACAAGTGGCTCACCTGGATCTGTGGACTGCTCGATACCTCCTCCACGCGAGTCATG
ATAAATGGCCG-CCCAGTCAAGCCAATCCTGGCGTGTCAAGGCTTCAGGCAAGGTGATCCATTGTCGCCGATGATATTCA
TCCTATGTATGGAGCCCCTCTTTGCGCTTTTCTAGTTTGCTCCCGAGCATTGCCTTCTTGCTCCCTTGGCTCGATCTGGC
ATGCAACAGCGCGGCTCAATGTTTGTGGACGATGTTGTGGTCTTCATCAAGCCAAGTGAACTTGAGGCTGCAACCTGCAG
CGTGATCTTGACTCTATTTGGTCAAGCTTCTGGGTTGTCTGTCAATCTGGCCAAGAGCTTGGTTCTTCCCATTCGATGTT
CTCCTGAGGAGATTGAGCTTCTATCTTCCATGCTGGGATGCCCTTTTGCCGCTTTCCCGTGCAAGTACTTGGGTCTGCCA
TTGACACT-
>chr6D_2434
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----------------------TTGACAAGATCCTTGCCACAAGACTTGCTGTGGAGCTTCCGAAGCTCGTGGGATGCCA
CCAAAGCGCATTTGTCAGAGGGCACGTTCCCTCCATGATAACTTCATGCTCGTGTAATGCACGGCATGACGTCTGCATGC
TTTGAGGAACCCAAAGGCCTTGCTCAAACTCGACATCATCAAAGCATTTGACTCCATACAGTGGCTGTTCTTGCTGGAGG
TCTTGCGAAGACTGGGCTTTGGAGATAGGTGGCTGACCTGGATCTGTGGACTCCTAGCCACCTCCTCCACACGGATCATG
ATTAATGGCCG-TCCCGGCAAGACAATTTTGGCGTGTCAAGGTTTCAGACAAGGGGACACACTGTCGCCGATGCTATTCA
TTCTCTGCATGGAACCCCTCTATGCACTCTTCGAGTATGCTACAGAGCATGGCCGTATAGCACATTTGGCTCGTTCCGGC
ATGCAACAGCGTGTCTCCATGTTTGCGGATGACGTCGTGGTCTTCATCAAGCCAACTGAACTTGAGGCGGCCACCTGCAG
GGCGATCTTGCGCCTGTTTGGCCAAGCTTCCGGTTTGTCTGTCAATATGGCCAAGAGTATGGTGCTCCCCATTAGATGTT
CCTAGGACGAGATCGAGCTGCTGTCCACTATGTTGGGATGCCCTATTGTTCCCTTTCCATGCAAATATTTGGGTCTGCTG
TTGACACTT
>chr7D_2586
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----------------GCCCTGCTCAAACTTGACATCACCAAAGCATTTAACTCCATACAATGGCCGTTCTTGCTCCAGG
TCTTACGTAGATTGGGCTTTGGAGACAAGTGGTTGACCTGGATCTGTGGACTGCTAGCCACCTCCTCCACGTGGATCATG
ATCAATGGACG-TCCCGGTAATCCAATCTTGGCGTGTCAAGGTTTCAGGCAAGGGGACCCGCTATCGCCGATGCTCTTCA
TTCTCTGCATGGAACCCCTCTCTGCACTCTTTCACTATGCTACAGAGAAAGGCCTTCTAGCCCCTTTGGCTCGTTCAGGC
CTGCAACAGTGTGTCTCCATGTTTGGGGATGATGTTGTGGTCTTCATCAAGCCAAATGACCTTGAGGCGGCCATCTGCAG
GGCAATCTTGCACCTGTTTGGCCAAGCTTCCGGACTATTTGTTAACATGGCCAAGAGTGTGATGCTCCCCATTAGATGTT
CCCAGGACGAGATCGAGCTGTTGTCCACTATGTTGGGATGCCCTACTGCTCCTTTTCCGTGCAAGTATTTGGGACTTCCG
TTGACACTT
>SNPs
-----------S-----S--------------------------------------------------------------
-------------S-----S--------------------S---------S-S-S---------------SS--------
----------------------S---------------------------------------------------------
------------------S---------------------------------------S---------------------
-------------------------S----------S------------------S--S--------------------S
SSS------------------------------S----------------------S-----------------S-----
-----------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------SSSS---
--------------------------------------------------------------------------------
-----------S-------------S-----------S-------------------------------------S----
--------S---------------------S-------------------------------------------------
-----------S-------------------------------------S------------------------------
-------S----------------------------------------------------------S-------------
-----------------------------S-----S--------------------------------------------
------SS-------------SS--------S----------S------S----------S--------------S----
--------------SSS-S-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S---S----------SSSSSSSSS--S-----S---S------------
------------------------S----S--------S-S------------------------------S--------
-------------------------------------S-----S------------------------------------
------------------------------------------------------S------------------------S
-------------------------S-------S---------S-------------S----SS----------------
-S-------S-----S----------------------------------------------------------------
------SS-------------------------S--S----------------------------------------S--
----------------------------------------------------------------------SS--------
---------------------------S----------------------------------------------------
--------------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
S---------------------S-------------------------------------------------------SS
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
-------------SS---------------------------------------------------------S-------
------------------------------------------------------------------------------S-
---S------------------------------S---------------------------------------------
-----------S--------------------------------------------------------------------
----------------------------------SS----------------------------S---------------
-----------------------------------------------S----------------------------S---
--------------------------------------------------------------------------------
--------S----------S------------------------------------------------------------
---------
>forward_376
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------------------------------------GGCGATCCGACCTATCAACC------------------------
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>reverse_1850
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---------TCATCGCTGCTTCTTCAGGG---------------------------------------------------
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>forward_1760
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------------------------------------------------------------ATGGTACGCAGCTCCTCATG
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>reverse_2633
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------------------------------------------------------------------------ATGCATGC
TTTGAGGAACCC--------------------------------------------------------------------
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---------
