>input_sequence_59660
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-------------------CTATAAAGGCCACCTGCTCCAAGCTCCTTACCATATCACAAGAAGCCGATCCACTCCAAG-
---CACAGTCGAGCAGAAGCCTAAAGCGAGTGAGATTTCCCCCTTCCCATTGATTCCAGTTAGTGTTCCAAGAAACC---
------AAAATGGCCTCCAACCAGAACCAGGCCAGCTACCACGCCGGCGAGACCAAGGCCCGCACCGAGGTAACCCTAGT
CTCCCTCCTTGGTGTGTAGTGTGCACTCTGCCG-------CGCGCATGCGCCGTTGCTCCGGCGGTGATCTGAGATGTTC
TGTCTGTTGGATGAATTGCAGGAGAAGACCGGGCAGGTGATGGGCGCGACCAAGGACAAGGCGGGGCAGACCACGGAGGC
CACGAAGCAGAAGGCCGG---------------------------------CGAGACCACGGAGGCCACGAAGCAGAAGG
CCGCCGAG---------------------ACCACGGAGGCGGCCAAGCAGAAGGCCAGCGAGACGGCCGAGGCCACCAAG
CAGAAGGCCGCCGAGGCCA-------------------------------------------------------------
--------------------------------------AGGACAAGACGGCGCAGACGGCGCAGGCGGCCAAGGAGAAGA
CGTACGAGACGGCGCAGTCGGCCAAGGAGCGCGCCGCCCAGGGCAAGGACCAGACCGCCAGCACCCTCGGCGAGAAGACG
GAGGCGGCCAAGCAGAAGGCCGCCGAGACCACGGAGGCGGCCAGGCAGAAGGCCGCCGAGGCGACCGAGGCGGCCAAGCA
GAAGGCGTCGGAGACGG---------------------------------CGCAGTACACCAAGGAGTCCGCCGTCGCCG
GCAAGGACAAGACCGGCAGCGTCCTCCAGCAGGCAGGGGAGACGGTGGTGAACGCCGTGGTGGGCGCCAAGGACGCCGTG
GCCAACACGCTGGGCATGGGCGGGGACAAC---ACCAACACCACCAAGGACAACACCACCGGCGCCACCACCAAGGA---
CACCACCACCACCACCAGGAATCACTAGACGCATGTGTTCCCG-------CTTAATTTGCTTTGCTTTAGTAGT------
--GTTTGGTCGTTCGCGGGCCTTCTACATA------TTT-GTATGTTTCCAC----------------------------
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---------------------------TCTTTCGTGATTTCAGCTCATTTGGTGTAAAAGTTTGCCTTCGATTTGATGTA
C---TCCTCGTGTCCGGTTCTGTATTAGTAC--GAGCTATGGTCCATAT---------ACTTTGGTGTAAATGGATATCG
AGGACACTCGAAGGCGGCA-------------------------------------------------------------
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>chr1A_1_TraesCS1A01G364000
CCTATAGATCACATGAAACAATTTGCAAATGCTTTGCATCATTTCATTGGAGGTACACATCCGGCGGAAGGCTCCACAAG
AATGATATAAGCTACAAATGAGTGCAATGTGTCCGGTCTTGCTTGGAAAAAAGGACAATGTATAATTTTCATCTTGCAAA
ATGAAGCACCCATGCTGATAATAAATGTATACTTTGCAAATTCTTCATGTGCATGTCTTGCTTTTTTTAACTACAAACAC
ATGCTCATAGAAGTTTGACTACAAACACATACACATATAATGTATCTATGGGGCGCGGCGTGCCCCCGCGCGGGCATGGC
TAGTTTAGGCCATTTAGGACGTCCTTGAGGCTAGGTGTTCTTTCGTCTCACTCAAAGCTAGA---------CAAAGACGC
GCCGATGCGTTGAGCTTCACAATATTTTTCTTTCTTGGT--TAAA---TCGCGAGATTTCCGAGCGAGCGTAGGGCGCAA
TTTTTTACC----CGCTGTCGCCGCTGCTACTTCTGGAAGAAGAAGCGTCCGATCTCATCGAATGGAGCGACGCCGCGTT
TGTTTATTCGTGTGGCTCGTGTGGTTTCCTTTTGCGGCGAGACAAGCGTCA------------CGCACGCACAAACAAAT
CACACCGAGATCGAGGGCAACACGTCGACGGATCAGAGATATCGATGCCGATGCACATGGCGGCGACGATGGCGTCCATG
--CATGCACCACCGCACCGCCACCAAG---------------------AGAGCCGCATCCAACTTGTGCTCGATCGCTCG
CCAGCGTGCGTGCACCCTGCTGCCGGGCAGGCAGATGACTCGTTGCCGTCACACGC----GCCACCCCTTTACACTTGTT
TATTGCAGCTTCTTCACCCGCTTTTGGCCTCTTCTTCCTCCGGCATGGGCTCGGTCGAATCGGTTCCATCTACATGGCAG
AGCTTCGCGAAGGTACGGCCGGGGGTGCGGCGACGCGTGTCCTCCCTACGTGGCGGCCAT--ACGAGCACCGCCGCGCAA
CGTGTCTCATAGGTTCTGCCTATAAAGGCCACCTGCTCCAAGCTCCTTACCATATCACAAGAAGCCGATCCACTCCAAG-
---CACAGTCGAGCAGAAGCCTAAAGCGAGTGAGATTTCCCCCTTCCCATTGATTCCAGTTAGTGTTCCAAGAAACC---
------AAAATGGCCTCCAACCAGAACCAGGCCAGCTACCACGCCGGCGAGACCAAGGCCCGCACCGAGGTAACCCTAGT
CTCCCTCCTTGGTGTGTAGTGTGCACTCTGCCG-------CGCGCATGCGCCGTTGCTCCGGCGGTGATCTGAGATGTTC
TGTCTGTTGGATGAATTGCAGGAGAAGACCGGGCAGGTGATGGGCGCGACCAAGGACAAGGCGGGGCAGACCACGGAGGC
CACGAAGCAGAAGGCCGG---------------------------------CGAGACCACGGAGGCCACGAAGCAGAAGG
CCGCCGAG---------------------ACCACGGAGGCGGCCAAGCAGAAGGCCAGCGAGACGGCCGAGGCCACCAAG
CAGAAGGCCGCCGAGGCCA-------------------------------------------------------------
--------------------------------------AGGACAAGACGGCGCAGACGGCGCAGGCGGCCAAGGAGAAGA
CGTACGAGACGGCGCAGTCGGCCAAGGAGCGCGCCGCCCAGGGCAAGGACCAGACCGCCAGCACCCTCGGCGAGAAGACG
GAGGCGGCCAAGCAGAAGGCCGCCGAGACCACGGAGGCGGCCAGGCAGAAGGCCGCCGAGGCGACCGAGGCGGCCAAGCA
GAAGGCGTCGGAGACGG---------------------------------CGCAGTACACCAAGGAGTCCGCCGTCGCCG
GCAAGGACAAGACCGGCAGCGTCCTCCAGCAGGCAGGGGAGACGGTGGTGAACGCCGTGGTGGGCGCCAAGGACGCCGTG
GCCAACACGCTGGGCATGGGCGGGGACAAC---ACCAACACCACCAAGGACAACACCACCGGCGCCACCACCAAGGA---
CACCACCACCACCACCAGGAATCACTAGACGCATGTGTTCCCG-------CTTAATTTGCTTTGCTTTAGTAGT------
--GTTTGGTCGTTCGCGGGCCTTCTACATA------TTT-GTATGTTTCCAC----------------------------
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---------------------------TCTTTCGTGATTTCAGCTCATTTGGTGTAAAAGTTTGCCTTCGATTTGATGTA
C---TCCTCGTGTCCGGTTCTGTATTAGTAC--GAGCTATGGTCCATAT---------ACTTTGGTGTAAATGGATATCG
AGGACACTCGAAGGCGGCAATAAAGTGTAATTTCTTTATTCCGATGGTCTACATTCCTTCCCCTCATTTCTATAAACGCA
CATCCTACCCTAGGACCCTTCAAAAAGATTAAGCCGGCAAAAGTTACCGTAGACATAGTCGACCGAAACGTCTTCTCTAC
ACAAGCACCTCGTTGGGCTCGTTACCATACACACTTTATAGTCGACGGGACGTCTCCTCTTAAGATTTTATGAAGAGATT
TTGGTCGATGGGACGTCTCCTTTTAAGATTTTATGAAGAGATTTTGGTCGATGGGACGTCTCCTCTTAAGATTTTATTAA
GAGATTTTCACTGAACATAAGCATCCAACATCTTCTCACTTACCTGGTTGGGTTGGGCTCGTCTCCTCTCACTGAACACA
AGCACCGTTGGTGGGCTTGTCTCTTCTCCTAAACGCAAGCATCCTCATCGGGTTAGGATACTGCTGTTCATATAACATCA
GATTAATCACTCCACAACAGTATTATTAAATGGGTCTGTCTAGGATAGTCATGTCACAAGCATAAAAAATATAGAAAATA
GTTACATATGATTTGTACAGTGGATGATATTGTTTTTGTGATCAGGAAGAAATAATACAACATCTATTCATAGATTACCT
TCTCATAAGTCTACTTTAGCGAACGATTCATATAGCCTTTAACATAATTCCTCCGGTTATTATATAGCCTTTAACATAAT
TCCTTCGGTTAGCATTGAATTTTTATTTGGGACATGGTTAGCTGCAGTAGATCATATTATCGCGTCGCCTATTTGAATTG
AAATATGCACGCTTATTTAGGCTATATGGAACTGCATGAACAATATAATTTTTAACAGACAACACATTATTTTAAAGTTC
TCGCAAGTCATTTTAAGAGTTACGACATGGATCGATACATGGTCCTTGCTCACTCTTATGAATTCTAGGAAGCATT----
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----------------------------------------------------------TGATTACTGGGTGCAACCAATA
AGAAATGGTAGCACGGGCTATATTTAACTGATTTGGATGAC---------------------------------------
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>chr1D_324
TTTG----------------------------------------------------------------------------
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-------GGCCATTTAGGACGTGCTTGAGGCTAGGTGTTCTTTCGTCTCAAATTTCTAAAAAAAAGCGAGGCAAAGACAC
GTCCAGGTGTGGAGCTTCAAAATATTCTTCCTTCTTCCTCGAGTTACTTCGCGAGATTTCCAAGAGTACGTATGGTGCAT
CTTTTTTTCTGTTCGTTGTCAGTGCTACTACTTCTGGACGAAGAAACGTCCGATCTCATCGAATGGAGCGACGCTGCGTT
GTTTAT----------TCGTGTGGTTTCCTTTTGCGGTGAGACAAGCATCGCACGTGACAACGCGCACGCAAAAACAAAT
CACGCCGAGATCGAGAGCAACACGTCGACGGATCAGAGACACCGATGC--ATGCACATGGCGGCGACGATGGCGTTCGCG
TCCATGCTCCACCGCACCGGCACCAAGTGTAATAAATCGACCAGGCAGAAAGCCGCATCCAACTTGTGCTCGCTCGGCAC
CGTGGAGGTGCACCGTAAATTGTG--------------CTCGTCGTCGTCACACGCATGCACCACCCCTTTACACTTGTT
TATTGCAGCTTCTTCACCCGCTTTTGGCCTCTTCTTCTTCCGGCATGGGCTCGGTCGAATCGGTTCCATCTACATGGCAG
AGCTTTGCGAACGTACGGC-GGGGGAGCGGCAACGCGTGTCCTCCCTACGTGGCGGCCATGTACGAGCACCGCCGCGCAA
CGTGGCTCACAGCTTCTGCCTATAAAGGCCACCTGCTCCAACCTCCTTACCATATCACAAGAAGCCGAACCATTCCAAG-
---TACTGTCGAGCAGAAGCCTAAAGCGAGTGACATTTCCCCCTTCCGAGCTAGTT------------CAAGAAACC---
------AAAATGGCCTCCAACCAGAACCAGGCCAGCTACCACGCCGGCGAGACCAAGGCCCGTACAGAGGTAAGCGTTTT
TTTACT----------TAGTGTGCACTCTGCTG-------CGCGCATGCGCCGTTGCTCCGGCGGTGATCTGAGATGTTC
TATCTGTTGGATGAACTGCAGGAGAAGACCGGGCAGATGATGGGCGCGACCAAGGACAAGGCCGGGCAGACCACGGAGGC
CACCAAGCAGAAGGCCGG---------------------------------CGAGACGGCCGAGGCAACGAAGCAGAAGA
CTGGCCAG---------------------GCCACGGAGGCTACCAAGCAGAAGGCCGGCGAGACGGCCGATGCCACCAAG
CAGAAGGCCGCCGAGGCCA-------------------------------------------------------------
--------------------------------------AGGACAAGACGGCGCAGACGGCGCAGGCGGCCAAGGAGAAGA
CGTACGAGACGGCGCAGTCGGCCAAGGAGCGCGCCGCCCAGGGCAAGGACCAGACCGCCAGCACCCTCGGCGAGAAGACG
GAGGCGGCGAAGCAGAAGGCCGCCGAGACCACGGAGGCGGCCAGGCAGAAGGCCGCCGAGGCGACCGAGGCGGCCAAGCA
GAAGGCGTCGGAGACGG---------------------------------CGCAGTACACCAAGGAGTCCGCCGTCGCCG
GCAAGGACAAGACCGGCAGCGTCCTCCAGCAGGCCGGCGAGACGGTGGTGAACGCCGTGGTGGGCGCCAAGGACGCCGTG
GCCAACACGCTGGGCATGGGCGGTGACAAC---GCCACCA------AGGACACCACCACCGGCGCCACCACCAAGGA---
CACCACCAC------CAGGAATCACTAGACGCATGCGTTCGCG-------CTTGATTTGCTTTCCTGTAGTCGT------
--GTTTGGTCGTTCGCGGGCCTTCTACATA------TTTTGTATGTTTCCAC----------------------------
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---------------------------TCTTTCGTGATTTCAGCTCATTTAGTGT--AAGTTTGCCTTCGATTTGATGTA
C---TACTCGTGTCCGGTTCTGTAATAGTA--------------------------------------------------
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>chr1B_384
AAAGAT--------------------------------------------------------------------------
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------------------------------------------------------------------------------GC
GCCAATGCGTTGAGCTTCAAAATATTTTTCTTTCTTGGTTATAAA---ACGCGAGATTTCCGAGCGAACGTACGGTGCAA
TTTTCTACC----CGCTGTCACCGCTGCTACTTCTGGATGAAGAAGCGTCCGATCTCATCGAGTGGAGCGACGTTGCGTT
GTTTAT----------TCGCGTTGCTTCCTTTTGCGGTAAGACAGGCATCGCACGTGACACCGCGCGCACACAAACAAAT
TACACCGAGAGAAAAAACAACACGTCGATGGATCATCAGA---GATGCCGATGCACATGGCGGCGACGATGGCGTCGATG
--CATGCTCCACCGCACCGCCACCAAGTTGCAACCTCG---CAGCCAGAGAGCCGCATCCAACTTGTGCTCGCTCGCC--
---------------------------------------------------------TGCGCCACGCCTTTACACTTGTT
TATTGCAGCTTCTTCG-CCCCTTTTGGCCTCTTCTTCCTCCGGCATGGGCTCGATCGAATCGGTTCCATCTACATGGCAG
AGCTTCGCGAAGGTACGGC-TGGGGAGCGGCAACGCGTGTCCTCCCTACGTGGCGGCCATGTACGAGCACCGCCGCGCAA
CGTGGCTCATAGCTTCTGCCTACAAAGGCCACCTGCTCCGTGCTCCTCACCATATCACAAGAAGCCGATCCATTCCAAG-
---CACAGTCGAGCAGAAGCCTAAAGCGAGTGACATTTCCCCCTTCCGAGCTAGCT------------CAAGAAACC---
------AATATGGCCTCCAACCAGAACCAGGCCAGCTACCACGCCGGCGAGACCAAGGCCCGCACCGAGGTAACCGTCGT
CT----CCTTAGTGTGTAGTGTGTGCTCTGCCG-------CGCGCATGCGCCGTTGCTCCGGCGGGGGTCTGAGATGTTC
TGTCTGTTGGATGAATTGCAGGAGAAGACCGGGCAGGTGATGGGCGCGACCAAGGACAAGGCGGGGCAGACCACGGAGGC
CACCAAGCAGAAGGCCGGACAGACCACCGAGGCCACCAAGCAGAAGGCCGGCGAGACGGCCGAGGCAACGAAGCAGAAGG
CCGGTCAG---------------------GCCACGGAGGCCACGAAGCAGAAGGCCGGCGAGACGGCCGAGGCCACCAAG
CAGAAGGCCGCCGAGGCCA-------------------------------------------------------------
--------------------------------------AGGACAAGACTGCGCAGACGGCGCAGGCGGCCAAGGAG----
-----------------------------CGCGCCGCCGAGACCAAGGACCAGACCGGCAGCTACCTCGGCGAGAAGACA
GAGATGGCCAA---------------------------------GCAGAAGGCCGCCGAGACGACCGAGGCTGCCAAGCA
GAAGGCCTCGGAGACGG---------------------------------CGCAGTACACCAAGGAGTCCGCCGTCGCCG
GCAAGGACAAGACCGGCAGCGTCCTCCAGCAGGCCGGCGAGACGGTGGTGAACGCCGTGGTGGGCGCCAAGGACGCCGTG
GCCAACACGCTGGGCATGGGCGGCGACAAC---GCCACCA------AGGACACCACCACCGGCGCCACCACGAAGGACAC
CACCACCACCACCACCAGGAATCACTAGACGCATGCGTTCGCG-------CTTGATTTGCTTTCCTTTAGTCCT------
--GTTTGGTCGTTCGCGGGCCTTCTACATA------TTT-GTATGTTTCCAC----------------------------
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---------------------------TCTTTCGTGATTTCAGCTCATTTAGTGTT-AAGTTTGCCTTCGATTTGATGTA
C---TACTCGTGTCCGGTTCTGTAATAGTTAAAGAGTTACGATCCATGT---------GCTTTGGTGTAAATGGATAACG
AGGACACTCGAAGGCGGCAATAAAGTGTA---------------------------------------------------
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>chr1B_950
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----------------------------------------------TACGTGGCGGCCACGTACGAGCACCGCCGCGCGA
CGTGTCCCGTTGCTTCTGCCTATAAATGCCGCCTGCTGCAATCTCCTTTCCAA--CACAAGCAGTCGATCGATTCATCCA
AGCCAGAGTTGAGCAATACTAGCAGTGAGA-------------TTTACAGTGATTTCAGTTCGTGTTTGTTGGTGAGAGA
CAAGAGAAGATGGCCTCCAACCAGAACCAGGCGAGCTACGCGGCCGGCGAGACCAAGGCCCGCACCGAGGTAACCCTCGT
CTCCCGCAGTGCCTGCCACTTCATCGTGCATTCA--------------------TGCTCA----GTGATCTGAAATGCTC
TCTTGGTTTGGCTGC--GCAGGAGAAGACCGGGCAGATGGTGGGTGCAACCAAGGACAAGGCGGGGCAGGCCACGGAGGC
CACCAAGCAGAAGGCCG---------------------------------------------------------------
---------------------------------------------------------GAGAGACAGCCGGGGCCACCAAG
CAGAAGGCCGGCGAGGCCA-------------------------------------------------------------
--------------------------------------AGGACAAGACGGCCCAGACGGCGCAGGCGGCCAAGGAC----
-----------------------------CGCGCCGCCGAGAGCAAGGACCAGACCGGCAGCTTCCTCGGCGAGAAGACG
GAGGCGGCCAAGCAGAAGGCCGCCGAGACGG---------------------------------CCGAGGCGGCCAAGCA
GAAGGCGTCGGAGGCGGCGCAGTACGCGCAGGAGAGGTCCTCCGACGCCGCGCAGTACACCAAGGAGTCCGCCGTGGCCG
GCAAGGACAAGACCGGCAGCGTGCTCCAGCAGGCCGGCGAGACGGTGGTGGGCGCCGTGGTGGGCGCCAAGGACGCCGTG
GCGAACACGCTGGGCATGGGTGGTGACAAT---GCCACCA------AGGA------------------------------
------CACCACCACCAGGAATCACTAGACGCATGCGTTCGCG-------CTTAATTTGATCTCCTTTAGTCGTGTTCGG
CCGTTCGGTCGTTCACGAGCCTTCTACAGTACATATTTT-GTATGTTTCCAC----------------------------
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---------------------------TCTTTCGTGATTTCCGCTCATTT------------------------------
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>chr1D_1135
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------AAGATGGCCTCCAACCAGAACCAGGCGAGCTACGCGGCCGGCGAGACCAAGGCCCGCACCGAGGTAACCGCCGT
CTCCCGCAGAGCCTACCACTTCATCGTGCATTCCTCCTGCCGCGCATGCGGCGTTGCTCA----GTGAACTGAAATGATC
TCTTGCTTG-------TGCAGGAGAAGACCGGGCAGATGAT------------GGACAAGGCGGGGCAGGCCACGGAGGC
CACGAAGCAGAAGGCCG---------------------------------------------------------------
---------------------------------------------------------GCGAGACGGCCGAGGCCACCAAG
CAGAAGGCCGGCGAGGCCA-------------------------------------------------------------
--------------------------------------AGGACAAGACGGCCCAAACGGCGCAGGCCGCCAAGGAC----
-----------------------------CGCGCCGTCGAGAGCAAGGACCAGACCGGCAGCTTCCTCGGCGAGAAGACG
GAGGCGGCCAAGCAGAAGGCCGCCGAGACGG---------------------------------CCGAGGCGGCCAAGCA
GAAGACGTCGGAGACGGCGCAGTACGCGCAGGAGAGGTCCTCTGACGCGGCGCAGTACACCAAGGAGTCCGCCATCGCCG
GCAAGGACAAGACCGGCAGCGTGCTCCAGCAGGCCGGCGAGACGGTGGTGAACGCCGTGGTGGGCGCCAAGGACGCCGTG
GCGAACACGCTGGGCATGGGCGGCGACAAC---ACCAACACCGCCAAGGACACCACCACCGAGAAGAT------------
------------CACCAGGGATCACTAGACGCATACATACGTCCAGTCTTCCTAATTTGCTTCCTTTACT----------
-CGTTTGGTCGTTCGCGGGCCTTTTACATA------TTT-GTATGTTTCC-C----------------------------
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---------------------------TCTT--GTGATTTCCGCTCATTTAGGGT--AAGTTTGCCTTCGATTTGATGTT
GATGTACTCGTGTCCGGTTCTGTAATGAGTTACTTATA---------AT---------ACTTTGGTGTAAATGGATAACG
AGGACAGTCGAAGG------------------------------------------------------------------
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>chr1D_1297
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---------------TTGCAGGAGAAGGCTGGACAGGTGATGGGCGCGGCCAAGGACAAGGCGTACGAGGCCAAGGACCG
TGCGGCGGGCCT------------------------------------------------------------------GG
CGGGGCACGCGTCCGGGCAGGGGCAAGGCGCCACGGAG---------------------------------GCCACCAAG
CACAAGGCCGGCGAGGCCACGGACAGGGCGTCCCAGACGGCGCAGGCGGCCAAGGACAGGGCTGCCGGGACGGCGCAGGC
CGCCAAGGACAAGACCAACGAGACCGCCCAGGCGGCCAAGGACAAGGCGGCCGGGACGACGCAGGCGGCCAAGGAC----
-----------------------------CGCACCGTCGAGGGCAAGGACCAGACCGGCAGCTTCCTCGGCGAGAAGACG
GAGAT------------------------------------------------------------------GGCCAAGCA
GAAGGCGGCCGAGACGGCGCAGTACACGCAGGACAGGACCTACGACGCGGCGCAGTACGCCAAGGAGTCCGCCGTCGCCG
GCAAGGACAAGACCGGCAGCGTGCTCCAACAGGCCGGCGAGACGGTGGTGAACGCCGTGGTGGGCGCCAAGGACGCCGTG
GCCAACACGCTGGGGATGGGCGGAGACAACAATACCAACACCGCCAAGGACACCACCACC--------------------
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>chr1A_1393
CCACC---------------------------------------------------------------------------
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----------------------------------------------------------------------AAGGACAAGG
CGGGGCAG---------------------GCCACGGAG---------------------------------ACCACGAAG
CAGAAGGCCGGCGAGGCCA-------------------------------------------------------------
--------------------------------------AGGACAAGACGGCCCAGACGGCGCAGGCCGCCAAGGAC----
-----------------------------CGCGCCGCCGAGAGCAAGGACCAGACCGGCAGCTACCTCGGCGAGAAGACG
GAGGC------------------------------------------------------------------GGCCAAGCA
GAAGGCGTCGGAGACGGCGCAGTACGCGCAGGAGAGGTCCTCCGACGCCGCGCAGTACACCAAGGATTCCGCCGTCGCCG
GCAAGGACAAGACCGGGAGCGTGCTCCAGCAGGCCGGCCAGACGGTGGTGAGCGCCGTGGTCGGCGCCAAGGACGCGGTG
GCGAACACCCTGGGCATGGGCGGTGACAC---------CACCACCAAGGACACCACCACC--------------------
-------------ACCAGGAATCACTAGACGCATGCGTTGGCG-------CTTGATTTGCTTTGCTTTAGTCGT------
--GTTTGCTCGTTCGCGGGCCTTCTACATA------TCT-GTAAGTTGTATGTGATCGAATTTCTTCTATCACGGAATCA
TTGAAACTTCAAAATCCGTTGTTGCCGGACCAACTGGCTCATATGGTGAGGTTCCCTCTGGAGGAGCCAACCCACTCCAG
TTCTCGGTGCTTGTATTCTTCTGAATTTATTTCAGGTTTTTTATGATTGGACGTTGCGTCCGAATTTATTTCAGGTCTTT
TATGATTAGACGTTCCGCCAATAGGAATCTTTTGTCAAATCCGAAGATGTTGTGCTGGCTAAGTGCTTGCAATCATAGTG
ATGAGTGTGTATACTT----------------------------------------------------------------
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--------------------------------------------------------------TAAAAAATATCATTATCG
GTATCTCAGATGTTTTCATAGAAGTGTGTGCGTGCGTTCATAAGAGTGAGTGTATGTACATTTTAAAAATAAAGATGTTG
TACCGGTTTAGTACTCCCTCCAGTCCTTTTTACTCTAC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------ATATTAGAGTTC
TCTGAAGTCAAACAGCACAAAGTTTGACCGTATTTATTTGAAAAATATCAACATCTGCCATGCTAAAGTTATATAATATG
AAACTTTAAGTCATGACACATCTAGTGGTATTGGTTTCAGATTGTGAATGTTGGCATTTTTTTCTACAAAGTTGGTCAAA
CTTTACAAGGCTTAACTTCGGTCAAATCTTATATGCAAACTAAAAAGGACCAGATGGAGTATATCAAAAAATACTCATAG
GAGTGCGTGCATTCCTACTCATAGGAGTGAGTGTGTGTATGTTAAAAAAAATTGTTGCCCGAAGCTTTGTGTTTATTGAG
CCTTACTTCTTGCTAGATTGCTCGACAAAAGAAAAGTTCAAGCTTTTTCATTAGATATAAGCATACACAAAGCCTGCAGA
TACTTTCATTGATAGCTCATTGATGGATGAGCATTATTTTTGGTGAATACACAAAGCTTGGAAATAAAAAAGAGTACAAG
AATGATACAACACAAACGCAAAAAAAGAGATGGTACGCTTGGTTCAAACAAAGCAAAACACAACTAAACGCGTTAAGCCC
AAACTCCAGCCATAGAAGGCGAGGAGCCTTGGGAGTGCCTAGAGATCATCACATAGTAGGGTGTAGGAGCCATGGAATGC
AAGGAGCATCGAGACTGCCTAGAGATCGATAAGTAGACTGTCGAACACAACATCGAGAGTGCCTAGAGATTGGCAAGTAG
GCTGCACGACCCGCCATCGAGACTGACTAGAGACCAAAGACAGAAGCCATGGGGAAATTGGCGGTGAAGTAGTATATGGC
ACCTCGCATACCCATGCCTTTAGAGGCAGCCGGAATCAACATGACGTCCAATATCTTGAGATCCATTTTTTGACTGAATA
CTATGAGGCAAAAGCCCCACAGCCCTTTATTAAAACTCAAATAACCAAGGGCCCTTACAAGACAAAAGAGAAGAAAAACT
TACCTTTTTTTAAGGATACCCTACAAAGGTTGAAAACTCTTAGCTGCAATCGTAGGACAAAATTTCTTGCACATCGCTTG
GAGCGGAGCCAAGGTAGCAAAAATCTCCATGGTACTTCACTCTTGAAGCCAGACAGTGGGCAGCTTTGTTCCCGTCCCTA
CTAAGGGCCTCTTTGATTCGCGGGATTGCAAAAACACAAGAATAGGAAAAACGTGGGATTGAAATGACATGTCCATTGGA
TTCCTATAGAATTTGAGTTTGTTTGATTGTATCACAGGAAAAATAAAGGATTTCTTTCAAGAGGTTGGAGTGGATGCTAC
AATTCCTATGAAATGTAGTTCAAATGAATTCATAGGAAAAAATCCTATGGGATTCAATCCTGCGAATCAAACAATCAACG
TAGGAAAAATTCCGAAGGATTCTTATCCTTCAAAAATCCTATGAAAATCCTTTGAATCAAAGAGGCCCTAATCCACCTCA
CCACAAAGGAACTGAATCCAGACAGGGCAGCGTTGATGTCCGCAATGAGTGGAAAGAGTCTTGTTTTGTTCGTAGTGCCT
GGGGATAATGCATTCGCCACCGATTGACGGTCTACCTCAAGCTGGATTGGCCCGTTGTAGAACAACTTACCTATTTAACA
AAGTACAACAACAACTATAAACAGAAACTAACAGAAAGCATTCCCTGTACAATTAGGGTAAGTTGTTGATCCATGCCATG
AGAAGTGGTTTCACAGAGGTCTTGAACCTGTGTGAGAGGAGTGTAATATCATGGATGAATTTTTCTCTGAACTAGTTGCC
AAACATGTTACATACGCCACGGAGAGTGTATAAGTTGGAAGCTATGCAAGCTATGAACTACTACCTCCGTCCCAAAATAT
AAGAACGTTTTTGGGACGGAAGGAGTACATCATACGAGCCGACTTGCACTAAAAGACATATGCTTAATGAATTCGTTGCA
GTGACAAAATAAATGACAATTACTATCATGCCAATCTCAGTGTGTAAGGTTGTCTATAGTCAAAACTACTCCATGGTTTC
AAAGCCAGAAGAAGATCATCACTCAAAGTGGTAGCGGCACTAGGCTGGACGCACTCCCCATGCTAACAACAGAGCAACAG
TGTTGAACAATGCTGATATATCTACAATGAAGAAAGAAACGGCCATCACGCCCCCAGGCCACTGGCTTCGCTTCGTGGGG
CTTGACGCCACCATTGACTCAAACAGAAGCTAAGGCTTTGAAAAGATGAAACAGAAGCTAGGGCGCGTGGCCCGCCGACC
ACCGCATATCGCCTGGTCTGCATTGGACTTCACCGTCGCACTGCCCCACCCAATCTCCTTCCTGAACCTGCCTTTACACT
TGTGTTGGTCTCCTACTTGGCCTTGGGCACCGGCATCCGCATGTGTTGGATCGAATCAGCAGCTAGCTCGTGATATGGGT
GAGCGATCCAGCTTCGCGAAGCTACTTTGTAGCTACGTGGCGGCCAGGTACGAGCACCGCCGCGCGACGTGTCCCGTTGC
TTCTGCCTATATAATGCCGCCTGCTCGAATCTCCTTTCCAACACAAGCAGTCGATCGATTCATCCAAACCAGAGTTGAGC
AATACGTACTAGCAGTGAGATTTGGCCCTTCCAATCGAGTGATTTCAGTTCGTGTTTGTTGGTGAGAGAGAAGAGAAGAG
AAGATGGCCTCCAACCAGAACCAGGCGAGCTACGCGGCCGGCGAGACCAAAGCCCGCACCGAGGTAACCGTCGTCTCCCG
CAGTGCCTACGTACCACTTCATCGTGCATTAATTCGTGCTCAGTGATCTGAAATGCTCTCTTGGTTTGGCTTGGCCGTGC
AGGAGAAGACCGGGCAGATGATGGGCGCCACCAAGGACAAGGCGGGGCAGGCCACGGAGGCCACCAAGCAGAAGGCCGGC
GAGACGGCCGAGGCCACCAAGCAGAAGGCCGGCCAGGCCACGGAGGCCGCCAAGCAGAAGGCCGGCGAGGCCAAGGACAA
GACGGCCCAGACGGCGCAGGCGGCCAAGGACCGCGCCGCCGAGAGCAAGGACCAGACCGGCGAGAAGACGGAGGCGGCCA
AGCAGAAGGCCGCCGAGACGGCCGAGGCGACAAAGCAGAAGGCATCGGAGACGGCGCAGTACGCGCAGGAGAGGTCCTCC
GACGCCGCACAGTACACCGAGGAGTCCGCCGTCGCCGGCAAGGACAAGACTGGCAACGTGCTCCAGCAGGCCGGCGAGAC
GGTGGCGAACGCCGTGG
>chr1B_1500
GCAGAAGGCCGGAGAGGCCAAGGACAAGACGGCCCAGA------------------------------------------
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--------------------------------------------------------CGGCGCAGGCGGCCAAGGAC----
-----------------------------CGCGCCGCCGAGAGCAAGGACCAGACCGGCAGCTTCCTCGGCGAGAAGACG
GAGGCGGCCAAGCAGAAGACCGCCGAG---------------------------------GCAACCGATGCGGCCAAGCA
GAAGGCGTCGGAGACGGCCCAGTACGCGCAGGAGAGGTCCTCCGACGCGGCGCAGTACACCAAGGAGTCCGCCGTGGCCG
GCAAGGACAAGACCGGCAGCGTGCTCCAGCAGGCCGGCGAGACGGTGGTGAGCGCCGTGGTGGGCGCCAAGGACGCCGTG
GCGAACACGCTGGGCATGGGCGGCGACAAC---ACCAACACCGCCAAGGACAGCACCACCGAGAAGAT------------
------------CACTAGGGATCACTAGACGCATACATGCGTCCAATCTTGCTAATTTGCTTCCTTTACT----------
-CGTTTGGTCGTTCGCGGGCCCTTTACATA------TTT-GTATGTTTCC-C----------------------------
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---------------------------TCTTTTGTGATTTCCGCTCATTTAGTGT--AAGTTTGCCTTCGATTTGATGTA
C---TACTCGTGTCCGGTTCTGTAATGAGTTACTTATA---------ATCCATGTTTTACTTTGGTGTAAATGGATAACG
AGGACAGTCGAAGGTGTCAATAAAGT------------------------------------------------------
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>SNPs
---SS--SS-SS-SSSSS---SSSSS-S-S-SSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS---------------S---------------------------SSSSSSSSS-S-------------------
---S---------------S-----------------------------------------------S----S--S----
--------------------S-----------------S-----------------------------------S-----
SS--SSSSSSSSSSSS---------------------S---------S--S-----------------------------
---------------S-----------------------S-S--------------------------------------
-------S----------------------------------------------------------------S----SSS
-SS-SSS-S-SS-SSSSSSS--SSSSSSSSSSSSSSSS-----S-S----------------------------------
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-------------------S-----S-----S------------------------------------------------
------------S-----------------------------------------------------------S-------
---------------------------------S---------------S-----S-----S-----S------------
-----------------------------------------------------------------------------S--
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---------------------------------------------------------SS-S-----S-------------
---S-S-----------------------S----------SS--------------S-----------------------
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----------------------------------S--S------------------------------------------
-----------------------S----------------------------S---------------------------
-----------------------------------S----S------------------------------S--------
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--------------------------------------------------S----SS-----------------------
-----S------------------S-----S-----S--S-S-----------------------------------S--
-----------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------SSSS-SSS
--SS-SS-SSSS--S-SSSSSSSS--SSSSS--SSS-SSSSSSSS-SSSSSS--SSSSS-SS-SS-SSSSS-SSS-SSSS
-SS-SSSSSSS----SSSS-S-SSSS--SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S---S-----
--SS------SSSSSSSSSSSSSSSS-SS-SSSSSSSSSSSSSSS-SS-SSSS---SSSSSSS-SS--SS-SSSSS----
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-----------------------------------------------------------S-S-SS-S-S-S--SS-S--S
----S----SS---S-SSSSSS-SS-S---SS-SS--S--S---------------------------------------
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>forward_473
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-----------------------------------------------------AGATTTCCGAGCGAGCGTAG-------
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>reverse_2928
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-----------------------------------------------TCGATGGGACGTCTCCTCTT-------------
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-----------------
