>input_sequence_59628
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------------------------------------------------------C------TGCCTTTGGGCCGCTGCCC
TGCCACCAATGGCGAATAATTCGC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------TCTCCCACCACCTCCTCCTCCCGCTCGCCGGCGACGACGACC
CCGCC---TCCTCCTCCTCCTCCTCCGCCCTCGCCTTCCCCTCCTTCTGGCCGCCCTTCCCCTCCCTCCTCTCCGACTCC
GACCCCGA---CGCGCCCTTCTTCCCTCCCCGCCGCATGGACCGCCGCGTCGCCGCCCGGCAGGACACCGCCGCGGCGTT
CCTCGGCCTCGACTTCCACGACGAGGACTACGGCGCCGACTGGGCGTGGGCGGCGCCGGACGATCCCGGCCTGCCGCTCT
GCTGGGACTGCCTGCAACTGGAGGAGCACGACGCCCACCAGCGCTGGGACCTCGCGCTCAGCGACGCCGACGAGTGGGAG
CAGGTCGCCGCCCGGGGCCACGAGGAGGAGGCCGAGCCCCCCGCGGCGCGGAGCCTCGAGTGGGAGGTGCTCCTCGCCGC
CAGCAGCCTGGGCGGCCTCATCATCGACGAGGACGTCGACGACGCCGGCGTCATCGGCGGCG------GCGGCATCGAGA
CGTACTTCCTCGACGGCGGCGCCGACGACGACGACG------ACATGCTGTTCGGGCAGGTGGCCGCGGAGGCGGGGCAC
GAGCCCCCGGCCAAGGGCGGGCGCGCGGCGGCGAAAGCCGCCGTGGAGGGCCTCCCGACGGTGGTGGACGCGGCCCGGGG
CGGCGCGCAGTGCGCGGTGTGCAAGGACGGCATCGAGGCCGGCGAGGGGGCCCGGAGGCTGCCGTGCGCGCACCTCTACC
ACGACGCCTGCATCCTGCCGTGGCTCGCCATCCGCAACACCTGCCCGCTGTGCCGCCACGAGCTGCCCACCGACGACCCC
GACTACGAGAAGTGGAAGGCCAGGCGGG---------------ATGCCGATGCCAACGGCGACAGGTACGGCATCGCCGC
CGGTCATCCTGCTGAATGATGACTGCAGAGACCAGTAATTCGCTTCATGGATTAGGCATTGTGGTGCCAGTGCATTTGCG
ATAGCTGAGTGTGTTGCAGAAATTCTTTTTGATCATGAAGGGGAGCGTGGATGAAATGGATGTGAATTGGCGGGT-----
-TTTTTTCCATTTCATACAGAATGATACTACGAATAAGGTGCATTTTCAATA----------------------------
--------------------------------------------------------------------------------
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-------------------------------------------
>chr6A_1_TraesCS6A01G288800
TGTCTTCTGAGATATCATACATCTCTAACCTACCTCTCTGGGCGCACCGACTCATATCCGCCAAACCTAAGAGGACACAC
CGGCATAACATGACAGCCGATCTCAACATATCGACCGATCTTAAGAGGACACATCTCTAACCTAACTATCTCCCCCATGT
GTTTATTAAGAGAATAACATGACAGTATGGCGCC-AAAGCAAAGTATATGCAAGGTGGAGGCAACTTGGCGGGGCCGACA
ACAGCTATATATGAAGAAGATTTTTCCTTAGCTCGCTATTTTGGTCATGTATTTCTTTTAGTTTACCCCCAGCTAAAGTA
ATATTGTGGTGCATATACTAGCTAGACGCACAAGGCGAGGGG-TTTTTTGCGGCGGATTTTTTTCGCAGGGGTGAAGA-G
GGGGTTATTCTTGATGATCTTCTGGCAGACGATGTGTCCATTTTGCCAATCAATAAAGCACGTCATGAAGGCTTTA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------AGGGGACACCACCGGCAGGACGCCGCCCCTCGCTAGGCCGATAGCCTTTAGTTTTT
TTTTCTTTATCGTCTTCGTTAGCGCTGCGTCGCTATGTACCCGCCTTCGGGCTTGTATTCGTTTTGCTGTGTTGTTCCGC
TAAACCTTGTTGCACTTTGATGGACGTGTTGGATTTGTAAGGGCCTCGGTTTAAGGCCGGGCAAGCGCCTCCTTTCTAAA
AAAACGTCATGAA-------------------------------------------------------------------
----------GGAGCTGAGTCTACAGGGCGGGCGTC--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------TTTCGGCCCACGAGCGA
GCGAGCACAACGGAGCCGTTGCCCACCTGCAGACGC----------CGTGCACGCCCACCTCGTTCCCGTCGCCGGCGCC
GGACGTCCGGTACACCAACCCAACCCAAA-----CCCATCCCATCCCATCCCAATTTTAAAGCGCGCACAAAAAGTGGGG
GAGAAAA-CAAAACAAAACAAAAGCCAGGCGC-----AGCGCAGCGAGTGGACGAAAGCAAA---------GAGAGGGAG
AGCGAGCAA---------CACCGGCAGCGCAAACGTCCCCACCCCACCCCCACCC------TGCCTTTGGGCCGCTGCCC
TGCCACCAATGGCGAATAATTCGC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------TCTCCCACCACCTCCTCCTCCCGCTCGCCGGCGACGACGACC
CCGCC---TCCTCCTCCTCCTCCTCCGCCCTCGCCTTCCCCTCCTTCTGGCCGCCCTTCCCCTCCCTCCTCTCCGACTCC
GACCCCGA---CGCGCCCTTCTTCCCTCCCCGCCGCATGGACCGCCGCGTCGCCGCCCGGCAGGACACCGCCGCGGCGTT
CCTCGGCCTCGACTTCCACGACGAGGACTACGGCGCCGACTGGGCGTGGGCGGCGCCGGACGATCCCGGCCTGCCGCTCT
GCTGGGACTGCCTGCAACTGGAGGAGCACGACGCCCACCAGCGCTGGGACCTCGCGCTCAGCGACGCCGACGAGTGGGAG
CAGGTCGCCGCCCGGGGCCACGAGGAGGAGGCCGAGCCCCCCGCGGCGCGGAGCCTCGAGTGGGAGGTGCTCCTCGCCGC
CAGCAGCCTGGGCGGCCTCATCATCGACGAGGACGTCGACGACGCCGGCGTCATCGGCGGCG------GCGGCATCGAGA
CGTACTTCCTCGACGGCGGCGCCGACGACGACGACG------ACATGCTGTTCGGGCAGGTGGCCGCGGAGGCGGGGCAC
GAGCCCCCGGCCAAGGGCGGGCGCGCGGCGGCGAAAGCCGCCGTGGAGGGCCTCCCGACGGTGGTGGACGCGGCCCGGGG
CGGCGCGCAGTGCGCGGTGTGCAAGGACGGCATCGAGGCCGGCGAGGGGGCCCGGAGGCTGCCGTGCGCGCACCTCTACC
ACGACGCCTGCATCCTGCCGTGGCTCGCCATCCGCAACACCTGCCCGCTGTGCCGCCACGAGCTGCCCACCGACGACCCC
GACTACGAGAAGTGGAAGGCCAGGCGGG---------------ATGCCGATGCCAACGGCGACAGGTACGGCATCGCCGC
CGGTCATCCTGCTGAATGATGACTGCAGAGACCAGTAATTCGCTTCATGGATTAGGCATTGTGGTGCCAGTGCATTTGCG
ATAGCTGAGTGTGTTGCAGAAATTCTTTTTGATCATGAAGGGGAGCGTGGATGAAATGGATGTGAATTGGCGGGT-----
-TTTTTTCCATTTCATACAGAATGATACTACGAATAAGGTGCATTTTCAATACGAATAACGGTGTACGTAGATGCAATCT
A------------------TCTTTTCCAATGGAATGCAAAGAGAAGGAATAAGAATCGCCGACGAGGCCTCCACTCTGTC
GCTGAACGATATCTGTGGTGTAATTCTACATGAAGATTTGGCTTGTTCTCCAGAGATGCTGTAGGCAACACAAATTCAAA
TTCCTTGTGATTTCTGCGCTCAGGA-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CGACTCTTGCAGCAAAGTTTCATTTGAGAAACTGTGT
TTCTTTTTGATGAGACAGAGCAGGGCTATGCACTCTGCTGGCACTGGACCATCCTGAATCTGAAGTGAAACGAAAGGAGA
AAATCCCAAATAAACTGGGGGAAATCTATACTGCCAGCTCGT---------------GTGTTTCTTGCTCTGCACAAGGC
GTGGCGCTTGAGATAGTGTCGCCGGGGTGTTGACCCTGCCAGGAGAAGGTCAGCGGGACCTTTCTGCCGTTGGAAGATAG
GCCGGCGGCCCATGTTGCCCCGCCGCTTTGCGTATGGAAGTGGCGTTGCCGTTGGCACGTATGCGTCGCGACGTGAAGG-
------------GGAGGAGTACGGAGCGGAGATGCGCGGCGTCGCAGCAAACGTAATCCGCC------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------GCGTGCTGTGTAAAGGCGGCCACCTCGCCGGCTCGCCGGCCTCGCGAACGCCGAACCCTACTGCCGCATG
TGCTTGCTTGTTTTCCGCACGTAGTAGTAGCAGTAGCTTGGAAGCACGGCGTGCTCGCTCGAAAA---------------
----GGAGTGGAATCGATCCCTCCTCCCGCCGAAGGAACCAATGCATCTGTTCTATTCGATCGGCAGCCTTTGCTTGTCT
CGCACCTTTTTTTTCCGGGGCAAATAGGAGTTTTGTTCTATAATAATGCAACCGCTTATATATACATGCATACACTCATC
ACTATAAACGCACACACGCACACCATATCCTAACGAGCATCTTCGATACACTAAGCCGGCATATCATCCTGAGATCTTAC
AAAGTCACCGTAGGCTCCTCGTAGTCGACGAGAATGTCTCCTC
>chr6D_3
--TCTACTGAGATATCATACATCTCTAACCTAACTCTCCGGGCTCACCGACTCATATCCGCTGATCTTAAGAGAACACAC
CGGCATACCTTGACAA---ATCTCAACATATCGACCGATCTTAAGAGGACACATCTCTAACCTAACTATCTCCCCCGTGT
GTTTTCTAAGAGAATAACATGACTGTATGGCATCGAAAGCAAAGCATATGCAAGGTTGAGGCAACTTGGCGAGGCCGACA
ACAGCTTTATATGAAGAAGGTTTTT-----GCTCGCAATTTTGGTCATGTAAGTTTTTTAGTTTACCTCTAGGGAGAGTA
ATATTGTGGTGCATATACTAGCTAGATGTGCAAGGGGAGGGTTTTTTTTGCGGCTGCTTTTTTTCGGGGGTGGGGGGAGG
GGGGTTATTCTTGATGATCTTCTGGCAGACGATATGCCCATTTTGCCAATCAATAAAGCACGTCATGAAGGTTTTTTGGG
AACACCACCGGCAGGACGCCGCCCCTCACTACCCCGATAGCCTTTAGTTTTTTTCTTTATCGTCTTCGTTAGCGTTGCGT
CACTATGCACCCGCCTTCAGGCTTGTATCCGCTTTGCTGTGTTGTTTCGCTAAACCTTGTTGCACTTTGACAGACGTGTC
GGATTTGTAAGGGCTTCAGCTTAAGGCCGGGCAAACTCCTCCTTTAAAAAAAGTCATGAAGGTTTTTTATTAAAAAACAA
GACAGGCATAGAAAGCAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTCTTGATGATCTTCTGGCAGATGATGTGCCCATTTTGCCAATCA
ATAAAGCATGTCATGAAGGTTTTTAGGGGACACCACCGGCAGGACGCCGCCCCTCGCTTGCCCAATGGCCTTTAGTTTTT
TTTTCTTTAGCGTCTTCGTTAGCGCTGCCTCGCTATGTACCCGCGTTGGGGCTTGTATCCGTTTTGCTGTGTTGTTTCGC
TAAACCCTGTTGCACTTTGGCGGGCGTGTCGGATTTCTAAGGGCCTCAGTTTAAGACCAGGCAAGCGCCTCCTTTCTAAA
AAAACGTCATAAATGTTTTTTATAAAAAAAAAGAGAGAGAGACTTAGGGCCAGATTTTTTTTGTTTTTGTTTTTGCGAGT
ACGTAGGGCTGGCGCTGAGCCTACTTGGCGGGCGTC--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GTTTCGGCCCAGGAGCGA
GCGAGCACAACGGACCCGTTGCTCACCTGCAGACGTCGCGTCGCGTCGTGCACGCCCGCCTCGTTCCCGTCGCCGGCGCC
GGACGTCCGGTACACCAACCCAACCCAAACCCATCCCATCCCATCCCATCCCAATTTTAAAGCGCGCACAAAAGGTAGGG
GAGAAAA-TAAAACAAAACAAAAGCCAGGCGAAGCGCGGCGCAGCGAGTGGACGAAAGCAAACAGGGCAAAGAGAGGGAG
AGCGAGCGAGCAGCACCGCACCGGCAGCGCAAACGTCCCCACCCCACCCCCACCCCCACCCTGCCTTTGGGCCG-----C
TGCCACCAATGGCGAATAATTCGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCCCACCACCTCCTCCTCCCGCTCGCCGGCGACGACGACC
---------CCGCCGCCTCCTCCTCCGCCCTCACCTTCCCCTCCTTCTGGCCGCCCTTCCCCTCCCTCCTCTCCGACTCC
GACTCCGACGCCGCGCCCTTCTTCCCTCCCCGCCGCATGGACCGCTGCGTCGCCGCCCGGCAGGAGACCGCCGCGGCGTT
CCTCGGCCTCGACTTCCACGACGAGGACTACGGCGCCGACTGGGCGGT---GGCGCCGGACGAGCCCGGCCTGCCGCTCT
GCTGGGACTGCCTGCAGCTGGAGGAGCACGACGCGCACCAGCGCTGGGACCTCGCGCTGAGCGACGCCGACGAGTGGGAG
CAGGTCGCCGCCCGGGGCCAC---GAGGAGGCCCAGCCCCCCGCGCCGCGGAGCCTCGAGTGGGAGGTGCTCCTCGCCGC
CAACAACCTGGGGAGCCTCTTGATCGACGAGGACGTCGACGACG---------TCGGCGTCG------GGGGCATCGAGA
CGTATTTCCTCGACGGCGC------CGACGACGACG------ACATGCTGTTCGGGCAGATGGCCGCGGAGGCGGAGCAC
GAGGCCCCGGCCAAGGGCGGGCGGGCGGCCGCGAAGGCCGCCGTGGAGGGCCTCCCGACGGTGGTGGTCGCGGTCCGGGG
CTGCGCGCAGTGCGCGGTGTGCAAGGACGGCATCGAGGCCGGCGAGGGGGCCCGGAGGCTGCCGTGCGCGCACCTCTACC
ACGACGCCTGCATCCTGCCGTGGCTCGCCATCCGCAACACCTGCCCGCTGTGCCGCCACGAGCTGCCCACCGACGACCCC
GAGTACGAGAAGTGGAAGGCCAGGCGGGCCGCCGGCGATGCCGATGCCGATGCCAACGGCGACAGGTTCGGCATCGCCGC
CGGTCATCCTGCTGAATGATGACTAAAGAGATCAGTAATTTGCTTCATGGATTAGGCATTGTGGTGCCGGTACATTTGCG
GTAGCTCGGTGTGTTGCAGAAATTCTTTTTGATCATGAAGGGGAGCG-GCATGAAATCGATGTGAATTGGCGGGG-----
-TTTT-----TTTCATACAGAATGATAC---GAATAAGGTGCATTTTAAATTCGAATAATGGTGTATGTAGATGCAATCA
TCCAATCCGATGAGTCTGTTCTTTTCCAATGGAATGCAAAGAGAAGGACTAAGAATCAATGACGAGTCCTCCACTCTGTC
GCTGAACGATATCTGTATCTAGCGGCGTAGCCACCCAAAATTCAGCAAAGTTCTTCCAGCAATTACTGATCATCCTGGAA
GGAGAAACAATCCAAACTGGACAATTCTTCCGGCAAAATTGACCTCAAAGCAAAAGTATTTCACAAGCTGAATTGTTTCT
GAAAATATTTCACACCGCTGACCCTTTTGTGCAGAGCCTAACAGCTACGCGCTGCACTCTACTATGCAGCTCCTTACAGC
TAGGCGCTACACAGTGTAGTGCAGCGCCTAGCTGTCGGACGCTGCACAGGTGTGGCGCCTGAGTGTTAGACGCACGCTGC
ACAATAAAGTGCAGCGCCTTACTGTCAGGCGCTACACATTAGAGGTCAACTGGGTGAAATACTTTTAAAAATAGTTCACT
TTGTAAAATAGTTTCGCCTCGAGATCAAATTTGTGCCTTTTGCCGATTCTTCCAGCAAAGTTCCATTTGAGAAACTCTGT
TTC----TGACGAGACAGGGCAGGTTTATGCACTCTGCTGGCACTGGACCATCCTGAATCTGAAGTGAAACGAAATGAGA
AAATCCCAAACAAAGTGGGGGCAAATACTCAAA---------GCCAACTGAACTCGTGCGTTTCTTGCTCTGCACGAGGC
GTGGCGCTTGAGATAGTGTCACCCGAGTGTTGACTCTGCCCGGCGAAGGTCAGCGGGACCTTTCTACCGTTCGAAGATAG
GCCGGCGGCCCATGTTGCCCCGCAGCTTTGCGTATGGAAGTGGCGTTGCCGTTCGCACGTATGCGTCGCGACGTGAAGG-
------------GGAGGAGTACGGAGCGGAGATGCGCGGCGTCGCAGCAAACGTAATCCGCCCTCGACGCGAGGAATCCA
ATGATGAAAATGGTTCGAGATTTGGACGCATGGTTTAAGAGATAAAACATTTTAAATAAACGGATCTACAAAAAAGAGAA
AACTCCCAGGTTGCGACAAGTGGCGCGCTGCATGGGTGCCACTTGTCGCGACCTGGGAAAGTGAAGTGTTCTTTGCAACG
AGTACTCCTTAATTAGTGATTTCGCTGGAATGCTCGAGACCAGCGTTTATAGGGGCTGAGCAGATGGGCCTGTGTTTTCT
GGGCTGGGCTGGGCTGCACCGATGACTTGATGAGTAGTAGTAAAAAAAATGTTTGATTTTGGAGGGCATGCGTGTGTATA
TATATAGATGAGTGTTTTGCGTTAGTACTGTGTTAAAAAAAAGGTGGGAGACAAGCAAAGGCTGCCGATCGAACAGAACA
GCTCGCCGCCGCGTGTTGTGTAAAGGCGGCCACCTCGCCGGCGCGCCGGCCTCGTGAACGCCGAACCCTACTGCTGCATG
TGCTTGCTTGTTTTCCGCACGTAGTGGTAGCAGTGGCTTGGAAGCACGGCGTCCTCGCTCGGAAAAGGAGGTGGCCCGGT
TCAAGGAATGGAATCGACCCCTCCTCCCGCCGAAGGAACCAATGCAGCTGTTCTGTTCGATCGGCAGCCTTTGCTTGTCT
CCCACCTTTTTTTT------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr6B_414
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------ATCTTCTGGCAGACGAGGTGCCCATTTTGTCAATCAATAAAGCACGTCATGAAGGTTTTTAGGG
GACACCACCGGCAGGACGCCGCCCCTCACTACCCTGATAGCCTCTAGTTTTTTTCT------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------TTATTGTCTTCGTTAGGGTTGCGTCGCTATGTACCTGCCTTCGGGCTTGTATTAGTTTTGCTGTGTTGTTTCGC
TAAACTTTGTTGCACTTTGGCGGGCGTGTCGGATT-GTAAGGGCCTCAGTTTAAGGCCGGGCAAGCGCCTCCTTTCT-AA
AAAACGACATGAAGGTTTTTTAT-AAAAAAAAGAGAGAGAGACTTAGGGCCAGTTTTTTTTT-----------TGCGAGT
ACGTAGGGCTGGAGCTGAGCCTACTGGGCGGGCGTCGTTTCGGCTAGGGATGGCAATGGGTAGGGTATGGGCGGGTACAA
CCTCCTTCTGCCCAAACCCATACCCGTAGAAACCTTCTATACCCACCCATTGCAATACCCATGGGTATAAATCGATACCC
ATGCCCATACCCATCGGGTATCCTATACCCAATGGGTATCCAATGGGTACAATCTATGGTATTTAAATTTATAAAAAATA
AAGAAATGAGTCTAAAATTCAAGTGATGATAAGCGAGTAGTATGGCATCAACACAGCCTCCTCCGGTGGGTGGCCTCTTG
GAGGAATCAAGCGAGTATGAGCAACGGTTGGTAGAATCTCGACGTAGTGGGAGACGGCTATGGGAATTGGGGATCGCTGG
ATCAAGAGATGGACAGGAGTTTTCGACGACGAGAATTCAAGATTTCATCTTTTCGAGAAGACATATATGATGTAGGGGAA
GTGGCGAGAAAGCGCGTGTGAGCATCTGAGCTATGGCCGGTTTAGGGAATACAAGATTTAGGGATAGGCCATGGGAGTTA
GATGTTGGCACCACATATCATAGGACTTATTTTTATTTATTAATTTTTTGTGGGTATCCATTGAATTATTCATGGATGCA
ATTTCATACCCATACCCTACCCATATGTTTTGCGGGCATGGATACCCATTACCCATGGATACAAAACCTCTTCATGTCTT
GCCCATGCCCATTATATTCGAATAGTGTACCCGCGGGTATCCGTACCCATGGGCAAAACCTAGTTTCGGCCCAGGAGCGA
GCGAGCACAACGGATCCGTTGCTCACCTGCAGACGC----------CGTGCACGCCCACCTCGTTCCCGTCGCCGGCGCC
GGACGTCCGGTACACCAACCCAACCCAAACCCATCCC----------ATCCCAATTTTAAAGCGCGCACAAAAGGTGGGG
GAGAAAAACAAAACAAAACAAAAGCCAGGCGCGGGGCAGCGCAGCGAGTGGACGAAAGCAAACAGGGCAAAGAGAGGGAG
AGCGAGCGAGCA-----GCACCGGCAGCGCAAACGTCCCCACCCCACCCCCACCG-CACCCTGCCTTTGTGGCG-----C
TGCCACCAATGGCGAATAATTCGC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------TCTCCCACCACCTCCTCCTCCCGCTCGCCGGCGACGACGACC
CCGCCGCCTCCTCCTCCTCCGCCTCCGCCCTCACCTTCCCCTCCTTCTGGCCGCCCTTCCCCTCCCTCCTCCCCGACTCC
GACTCCGA---CGCGCCCTTCTTCCCTCCCCGCCGCATGGACCGCTGCGTCGCCGCCCGGCAGGAGACCGCCGCGGCGTT
CCTCGGCCTCGACTTCCACGACGAGGACTACGGCGCCGACTGGGCGG------CGCTGGACGAGCCCGGCCTGCCGCTCT
GCTGGGACTGCCTGCAGCTGGAGGAGCACGACGCCCACCAGCGCTGGGACCTCACGCTGAGCGACGCCGACGAGTGGGAG
CAGGTCGCCGCCCGGGGCCAC---GAGGAGGCCGAGCCCCCCGCGGCGCGGAGCCTCGAGTGGGAGGTGCTCGTCGCCGC
TAACAGGCTAGGCAGCCTCATCATCGACGAGGACGTCGACGACA---------CCGGCGTCGGCGTCGGCGGCATCGAGA
CGTACTTCCTCGACGGCGG------CGCCGACGACGAGGACGACATGCTGTTCGGGCAGCTGGCCGCGGAGGCGGAGCAC
GAGCCCCCGGCCAAGGGCGGGCGCGCGGCGGCGAAGGCCGCCGTGGAGGGCCTCCCGACGGTGGTGGTCGCGGTCCGGGG
CGGCGCGCAGTGCGCGGTGTGCAAGGACGGCATCGAGGACGGGGAGGGGGCCCGGAGGCTGCCGTGCGCGCACCTCTACC
ACGACGCCTGCATCCTGCCGTGGCTCGCCATCCGCAACACCTGCCCGCTGTGCCGCCACGAGCTGCCCACCGACGACCTC
GAGTACGAGAAGTGGAGGGCCAGGCGGGCCGCCGGCGATGCCA------ATGCCAACGGCGACAGGTACGGCATCGCCGC
CGGTCATCGTGCTGAATGATGACTAAAGAGATCAGTAATTTGCTTCATGGATTAGGCATTGTGGTGCCAGTACATTTGCG
GTAGCTCGGTCTGTTGCAGAAATTCTTTTTGATCATGAAGGGAAGCG-GGATGAAATCGATATGAATTGGCGGGTTAATT
TTTTT-----TTTCATACAGAATGATAC---GAATAAGGTTCATTTTGAATTCGAATAATGGTGTATGTAGATGCAATCA
ACCAATCCGATGAGACTGTTCTTTTCCAATGGAATGCAAAGAGAAGGAATAAGAATCACTGACGAGCCCTCCACTCTGTC
GCTGAACGATATCTGTATCTAGCGGCCTAGCCACCCAAAATTCAGCAAAGTTCTTCCAGCAATTACAGATCATCTTGGAA
GGAGAAACAATCCAAACTGGACAATTC-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TTCCAGCAAAGTTCCATTAGAGAAACTC-GT
TTC----TGACGAGACAGGGCAGGTTTATGCACTCTGCTGGCACTGGACCATCCTGAATCTGAAGTGAAACGAAATGAGA
AAATCCCAAACAAAGTGGGGGCAAAATACTCAAACACATACTGCCAACTAAACTCGCGTGTTTCTTGCTCTGCACGAGGC
GTGGCGCTTGAGATAGTGCCACCCGAGTGTTGACCCTGCCAGGAGAAAGTCAGCGGGATGTTTCTGCCGTTCCAAGATAG
AGTA--GGCCCTTGTTGCTCCGCCGCTTTGCGTATGGAAGTAGCGTCGCCGTTCGCACGTATGCGTCGCGACGTGAAGGA
GAGGAGAGGAGAGGAGGAGTACGTAGCGGAGATGCGCGGCGCCTCAGCAAAC----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------GTGTTGTGCAAAGGCGGCCACCACGCCGGCGTGCCTCGTCAATGCCAAT----------TGCCGCATG
TGCTTGCTTGTTTTCCGCACGTAGTAGTAGCAGTAGCTTGGAAGCACGGCGTGCTCGCTCGAAAAAGGA-GTGGCCCGGT
GCAAGGAATGGAATCGATCCCTCCTCCCGCGGAAGGAACCAATGCATCTGTTCTATTCGATCGGCAGCCTTTGCTT----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>SNPs
SS---S--------------------------S-----S----S-----------------SS-S-S------S------
-------S-S-----SSSS---------------------------------------------------------S---
----SS-----------------S-------SS-----------S-----------S--------------S--------
------S------------S-----SSSSS------S--------------SS-S------------S-S--SS-S----
--------------------------S-SS-----S-----S------------S-S---------SS--S-S-SS----
------------------------------------S----------------------------------S---S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S-S--S--S-------------
----------------------------------------------------------------------------S---
-------------------SS--S-----S-----------------S--------------------------------
--------------------------------------------------------------------------------
-------------------S----S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------S-------S---------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------SSSSS-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
---S-----------------------------------------S-------------------S--------------
----------------------------------------------SSSSS------------S----------------
----------------S-----------------------------------------S---------------------
---------------------SSS--------------------------------------------------------
--S----------S------------------------------SSSSSSSSS------S--------------------
-------------------SSSSSS----------------------------------S---------------S----
-----------------------------------S-------------------------------S-----S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
------------------------SS-----S--------S------------------------------S--------
S-----SS---------------------------------------S---------S----------------------
-----SSSSS------------------SSS----------------S---S-------S------S------------S
---------------------------------------------------------S-S------S-------------
----------------SSSSSSSSS-SSSSSS-SSSSSSSSSSS-SSSSSSSSSSSSSSSSSSSS--SSS--SS--SS--
SSSSSSSSS--SSSSS-SSSSSSSS-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------S----S----------S-------------S---
---SSSS---S-------S-----SS-------------------------------------------------S----
----------S---S------S--SS---S-SSS--SS-SS----------------------------------S----
--------------------S--S-S---------------------------------------------S--------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S--------------------------S-----------S-------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
-S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_90
----------------------------------------------------------------------GAGGACACAC
CGGCATAACA----------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------
>reverse_3738
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------GGATGTGAATTGGCGGGTTT---
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------
>forward_356
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------ACTAGCTAGACGCACAAGGC--------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------
>reverse_4022
--------------------------------------------------------------------------------
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---------------------AGGACGACTCTTGCAGCAAA---------------------------------------
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-------------------------------------------
