>input_sequence_59582
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-----------------------------------------------------------ATGATCGACGACCACACCGCC
GCGGGGACAATGAGCGGCAAGCAGGTCGAGGCAATATGCGCCATGATCAACGATGCCTGCA---ACGACGACGCAAAGGG
CTTGCATAGCGAGAAAGGGAGAAGGCGGCGCGAGCGCGACGCCGGCATCGGCAGCACCCGCTGCTACAAGCAGATGCGCA
GGCTCGGCAAGGGCTCCAGCGGCCGCGTCGTCATGGCGCAGCACCGCAACACCGGCCAGACGGTCGCCCTCAAGACCATC
CACGCGCGCGGCGGCGCGAGGCGCCCCAACGTCGGCGACCTGCTCAAGGAGGCCTGCGTCCTAGCGGCGTGCCGCGGGCA
CCCCAACCTCGTCGGCCTCCATGCCATCGTGCGCGACCCAGGCACCAAGCAGTACTGCCTCGTCATGGACTACGTCGGGC
CCAGCCTGTTCCATGCTCTGGACAGGCACGTGGAAGAGCACGGCCGCGCGTTCCCGGAGGCCGACGTGCGCCGGGTCATG
CGGCAGCTGCTCACGGGCGCCGCGGCGATGCACGAGCGCGGCATCATTCACAGGGACATGAAGACTGCAAACATCCTCAT
CGGAGAAGA---CGGTGGCGTCGTGAAATTCTGCGACTACGGGCTGGCAATGCCCACGGCCAAGGCAGAGCCGCCGTACG
GGCTGGCCGGGACGGTCCCCTACATGGCGCCAGAGATGCTGCTGGAGAAGCCGGAGTACGACGCGGCCGTAGACATGTGG
TCGCTCGGGTGCGTCATGGCAGAGATGCTCTCCGGCGAGGAGTTGTTCAGCGGGGAAAAGACGACGGGCCAGGTCGGCAA
GATACTCGATGTGCTCGGTGCGCCGGGCAGGAAAACATGGCAGCACTTGGAGTCCGCGCTCCGAGCTGATGAGGTGCGGC
AATGGCGGGCTCGACAGCGAGAAGTGCGGCGGCGCCATGACCGGTTACGAGAGCTGTTCCCCGAGGAACTGCTGTCGTGG
CACGGATTCCATGTCTTGAAGGGCCTCCTTACCTGCAACCCCAGCAAGAGGCTGACAGCGGCCGCCGCGCTCCGGTGTCC
CTGGTTCAAGGTCGACGGCCCTGGAACTGATGATGCTTCCGGTCACGGGATCGGCGGTACGGCATTAGCCAGGCACAC--
------------------TAGTTAG-------------------------------------------------------
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>chr5B_1_TraesCS5B01G230200
GGCGAGGAGCGCATCATCGTGTTCACGACCAACCACGTGGACGGCATCGACCCGGCGCTGCTGCGGCCGGGGAGGATGGA
CGTGCACGTGCGCCTGGGCCCGTGCGGCGCGCACGCCATGCGCGAGCTGGTGGAGCGGTACGTCGGGGCCAGCGTCGGCG
ACCAGGACATGCTGGACGCGGCGGAGGGCTGCATACGGGACGGCGCGGAGATGACGCCGGCTGAGGTGGGCGAAGTGCTG
CTGAGGAACAGAGACGAGCCGGAGACGGCGGTGACGGAGCTGGCGGCGGAGCTGAAGGCCAGGGTGAACGCGGCCGACGA
TCTCCAGTGGGAGGACTCGGCGGCGGAGCTCTCCGACGAGTCGCCGACGAAGAAAGGCAGGAAGGGGTTCGGCGGGTGGG
AGAGCAAGGTCAGGATCTTGGGGAGGCTTCGGAGCCTCACCAAGTCGGACTCCGGCCGGAGAGGCGTGTAGCTCCGATTA
CGTCTGACGTGCGTTTTAGGTTAGGCAAAATATCGGGCGCATCTTCA-AAGTTTAATGTATGGGTTTGATGGTTTCTTGT
AAGCTATAGTAGCCATGATCGACGGCTTCATAGCCGAGCAATATTCGAACCTCGCTCTGCGCGCGCACGTACCGACGTAC
GGCACCGGACGGGACGGC--------TTATACTTGCCCGGCACGACC----------CTCTCCTCCCATCCCACGTATAC
TTGAACCTCGCCCATACCTTCCTTCTCACGTAGTCTCGCTTACGGGAGCTGGCGCCGGTTGCACCATGACCAGCGACGAG
CACGCCGGCAAGGCGTGTCCAGCCCGCGGGATTCGTTCCTTTCGAACCTGCAGGATTCTATGGATCTTCGTCGAAATATC
ACTGGGAATACTGGTGATCTTCAAGAACCTGTGGATTCGGTTACGGTTGGCAGAAGCACAGCTCGCGCCGACGCTTCCCT
CCGCCAGCGCCGCCGGCACGACGACCATGACGGCCGCGCGAGTAGCCGACATATTCGCCATGATCGACGACCACACCGCC
GCGGGGACAATGAGCGGCAAGCAGGTCGAGGCAATATGCGCCATGATCAACGATGCCTGCA---ACGACGACGCAAAGGG
CTTGCATAGCGAGAAAGGGAGAAGGCGGCGCGAGCGCGACGCCGGCATCGGCAGCACCCGCTGCTACAAGCAGATGCGCA
GGCTCGGCAAGGGCTCCAGCGGCCGCGTCGTCATGGCGCAGCACCGCAACACCGGCCAGACGGTCGCCCTCAAGACCATC
CACGCGCGCGGCGGCGCGAGGCGCCCCAACGTCGGCGACCTGCTCAAGGAGGCCTGCGTCCTAGCGGCGTGCCGCGGGCA
CCCCAACCTCGTCGGCCTCCATGCCATCGTGCGCGACCCAGGCACCAAGCAGTACTGCCTCGTCATGGACTACGTCGGGC
CCAGCCTGTTCCATGCTCTGGACAGGCACGTGGAAGAGCACGGCCGCGCGTTCCCGGAGGCCGACGTGCGCCGGGTCATG
CGGCAGCTGCTCACGGGCGCCGCGGCGATGCACGAGCGCGGCATCATTCACAGGGACATGAAGACTGCAAACATCCTCAT
CGGAGAAGA---CGGTGGCGTCGTGAAATTCTGCGACTACGGGCTGGCAATGCCCACGGCCAAGGCAGAGCCGCCGTACG
GGCTGGCCGGGACGGTCCCCTACATGGCGCCAGAGATGCTGCTGGAGAAGCCGGAGTACGACGCGGCCGTAGACATGTGG
TCGCTCGGGTGCGTCATGGCAGAGATGCTCTCCGGCGAGGAGTTGTTCAGCGGGGAAAAGACGACGGGCCAGGTCGGCAA
GATACTCGATGTGCTCGGTGCGCCGGGCAGGAAAACATGGCAGCACTTGGAGTCCGCGCTCCGAGCTGATGAGGTGCGGC
AATGGCGGGCTCGACAGCGAGAAGTGCGGCGGCGCCATGACCGGTTACGAGAGCTGTTCCCCGAGGAACTGCTGTCGTGG
CACGGATTCCATGTCTTGAAGGGCCTCCTTACCTGCAACCCCAGCAAGAGGCTGACAGCGGCCGCCGCGCTCCGGTGTCC
CTGGTTCAAGGTCGACGGCCCTGGAACTGATGATGCTTCCGGTCACGGGATCGGCGGTACGGCATTAGCCAGGCACAC--
------------------TAGTTAGATGAATTCGCCACACCGGAAAAA--CAACTATATTGACGAGAAAACGGCGAAGGG
ATGAATAAGAATGTGTATAGCTTGTTTATTACGATCCGAAATGTACAAATATCATAACTCTACTGGAGTGGATTGTACAA
TCTAGGCGAATACTTCAATTAAAGTGTCA---AAACGAGTCACTTGCATGTGAAAAACGCAAAAGTGGATAGCACAGTCA
CTTACATATGAAAAACTTTG-------TTCAAAGAGATAATCTAATTCTTCTCTAACTTCGAATGAGAGGGTATACTGCA
GACAGAGTAAATTTTTCCTTGACAGTGCACAGGACAGAGGAAGTGCGCAAAGCTGCAGAACAATTGCTTGCAGAACCAGG
TGTGGTATTTCATCAGATAACAAAAGCAACACTGTCACATATGGATTTGCTTACCATCGAGGGCAGTGGTGGCAGCATGG
TCTGTTGTCTCCATCAATTCTAATCCAGGCGTCTGCAGCCTGAAATCACTCAGACATAAATATCAAAAAAGAACATCAAG
AAACAGAAGCAAACCAAATCTGGCAATCCGATGTTATACCCATTCTTAACCACATGTGAACTGAAATTAGCTAGTCTGCA
TTTATTAAAAATTAATGAGAACACACCACAGCACAAACCAAAACTTTTATGCTTGATAAT-------TAGGCAGAAAGCT
AA---CATAGCTGGTGCAAAAAATAGCATAAGAACCACCGATCAGCTGCCTGCCATGCTTTACAGAACATGGTTAGGGTA
TCCTTCCATACAGGGTTCCAATTATTTACCCTGTCACGGTAACTCAAGATTGAACAAAGACCGGTGGTTATAAGCACAGC
GCACCAAAAGCACAATCAACGCTTCTTCGGTGCAGCAGGTTTGGGAGGAGGCGCAGCAGAACCTGCAGTCTTTGGCGGTG
ACGACATCATCACCCTGTGCTTGTACATCTTCCACCAGTTCGCTGACGCCTCGTCGACAGTCCGGTAGGTCCAGAAGTGC
GGCCTGG
>chr5D_1
GGCGAGGAGCGCATCATCGTGTTCACGACGAACCACGTGGACGGCATCGACCCGGCGCTGCTGCGGCCGGGGAGGATGGA
CGTGCACGTGCGCCTGGGCCCGTGCGGCGCGCACGCCATGCGCGAGCTGGTGGAGCGGTACGTGGGCGCCGGCGTCGGCG
ACCAGGACATGCTCGACGCGGCGGAGGGCTGCATACGGGACGGCGCGGAGATGACGCCGGCCGAGGTGGGCGAGGTGCTG
CTGAGGAACAGAGACGAGCCGGAGACGGCGGTGACGGAGCTGGCGGCCGAGCTGAAGGCCAGGGTGAACGCGGCCGACGA
TCTCCAGTGGGAGGACTCGGCGGCGGAGCTCTCCGACGAGTCGCCGACGAAGAAAGGCAGGAAGGGGTTCGGCGGGTGGG
AGGGCAAGGTCAGGATCTTGGGGAGGCTTCGGAGCCTCACCAAGTCGGACTCCGGCCGGAGAGGCGTGTAGCTCCGATTA
CGTCTGGCGTGCGTTTTAGGTTAGGCAACA-ATGGAGCGCATCTTCACAAGTTTAATGTATTGGTTTGATGGTTTCTTGT
AAGCTATAGTAGCCATGATCGACGGCTTCATGGCCGAGCAATATTCGAACCTCGCCCTGCGCGCGCACGTACCGACGTAC
GGCACCGGACAGGACGGCTTATACAGTTATACTTGCCCGGCACGAGC----------CTCCCCTCCCATCCCACGTATAC
TTGAACCTCGCCCGTACCTTCCTTCTCACGTAGCCTCGCTTACGGGAGCTGGCGCCGATTGCACCATGACCGGCGACGAG
CACGCCGGCAAGGCGTGTCCAGCCCGTGGGATTCGTTCCTTTCGAACCTGCAGAATTCTATGGATCTTCGTCGAAATATC
ACTGGGAATACTGGTAATCTTCAAGAACCTGTGGGTTCGGTTACGGCTGGCAGAAGCACAGCCCACGCTGACGCCTCCCT
CCGCCGGCACCGCCGGCACGACGATCATGACGGCCGCGCGAGTAGCCGACATATTCGCCATGATCGACGTCCACGCCGCC
GCGGGGACAATGAGCGGCAATCTGGTCGAGGCAATATGCGCCATGATCAACGATGCCTGCCACGACGACGACGCAAAGGA
CTTGCATAGCCAGAAAGGGAGAAGGCGGCGCGAGCGCGACGCCGGCATCGGCAGCACCCGCTGCTACAAGCAGATGCGCA
GGCTCGGCAAGGGCTCCAGCGGCCGCGTCGTCATGGCGCAGCACCGCGACACCGGCCAGACGGTCGCCCTCAAGACCATC
CACGCGCGCGGCGGCGCGAGGCGCCCCAACGTCGGCGAGCTGCTCAAGGAGGCCTGCATCCTGGCCGCGTGCCGCGGGCA
CCCCAACCTCGTCGGCCTCCACGCCGTCGTGCGCGACCCAGGCACCAAGCAGTACTGCCTCGTCATGGACTACGTCGGGC
CCAGCCTGTTCCATGCTCTGGACAGGCACGTGGAAGAGCACGGCCGCGCGTTCCCGGAGGCCGACGTGCGCCGGGTCATG
CGGCAGCTGCTCACGGGCGCCGCGGCGATGCACGAGCGCGGCATCATTCACAGGGACATGAAGACTGCAAACATCCTCAT
CGGAGAAGAAGCCGGCGGCGTCGTGAAATTCTGCGACTACGGGCTGGCGATGCCCACGGCCAAGGCAGAGCCGCCGTACG
GGCTGGCCGGGACGGTCCCCTACATGGCGCCAGAGATGCTGCTGGAGAAGCCGGAGTACGACGAGGGCGTCGACATGTGG
TCGCTCGGGTGCGTCATGGCAGAGATGCTCTCCGGCGAGGAGTTGTTCAGCGGGGAAAAGACGATGGGCCAGATCGGCAA
GATATTCGATGTACTCGGCGCGCCGGGCAAGAAAACGTGGCAGCACTTCGAGTCCGCGCTCCGAGCTGATGAGGTGCGGC
AATGGCGGGCACGGCAGCGAGAAGTGCGGCGCCAC---GACCGGCTGCGGGAGCTGTTCCCGGAGGAGCTGCTGTCGTGG
CACGGGTTCCATGTCTTGAAGGGCCTCCTTACCTGCAACCCCAGCAAGAGGCTGACAGCAGCCGGAGCCCTCCGGTGTCC
CTGGTTCAAGGTCGACGGCCCTGGAACTGATGATGCTTCCGGTCACGGGATCGGCGGTACGGCATTAGCCAGGCACACTG
CATAGAGAGGAGCAGCAATAGTTAGATGAATTCGCCACACAGGAAAAA--CAACTAAACTGACGAAAAACCAGCGAGGGA
ATGAATAAAAA--TGTATAGCTTGTTTATTACGATCGGAAATGTAAAAATATGATAACTCTACTGGAGTGGATTGCACAA
TCTAGGCGATCACTTCAATTAAAGTGTCATCAAAACGAATCACTTGCATGTGAAAAACGCAAAAGTAGATAACATAGTCA
CTTACATATGAAAAACTATG-------TTCAAAGAGATAATCTAAGTCT--TCTAACTTCGAATGAGTCGGTATACTGCA
GACAGAGTAAATTTTTCCTTGACAGTACA--------------------------CAGAACAATTGCTTGCAGAACCAGG
TGCGGTATTTCATAAGATAACAAAAGCAACACTGTCACATATGGATTTGCTTACCATCGAGGGCAGTGGTGGCAGCATGG
TCTGTTGCCTCCATCAGTTCTAATCCAGGTGTCTGCAGCCTGAAATCACTGAGAAATAAATCT-AAAAAAAAATATCAAG
AAACAGAAGCAAACCAAATCTGGCAATCCGATCTTATACCCATTCTTAACCACATTTGAACTGAAATTGACTAGTCTGCA
T---TTAAAAAGTAATGAGAACACACCACAGCACAAACCAAAACATTTATGCCTGATAAT-------TAGGCAGAAAGCT
AA---CATAGCTGGTGCAAAAAATAGCATAAGAACCACCGTTCAGTTGCCTGCCATGCTTTACAGAACATGATTAGGGTA
TCCTTCCATACAGGGTTCCAATTATTTACCCTGTCAGGGTAACTCAAGATTGAACAAAGACCGGTGGTTATAAGCACAGC
GCACCAAAAGCACAATCAACGCTTCTTCGGTGCAGCAGGTTTGGGAGGAGGCGCAGCAGAACCTGCAGTCTTTGGCGGTG
ACGACATCATCACCCTGTGCTTGTACATCTTCCACCAGTTCGCTGACGCCTCCTCGACAGTCCGGTAGGTCCAGAAGTGC
GGCCTGG
>chr5A_1
GGCGAGGAGCGCATCATCGTGTTCACGACGAACCACGTGGACGGCATCGACCCGGCGCTGCTGCGGCCGGGGAGGATGGA
CGTGCACGTGCGCCTGGGCCCGTGCGGCGCGCACGCTATGCGCGAGCTGGTGGAGCGGTACGTGGGCGCCGGCGTCGGCG
ACCAGGACATGCTCGACGCGGCGGAGGGCTGCATACGGGAGGGCGCGGAGATGACGCCGGCCGAGGTGGGCGAAGTGCTG
CTGAGGAACAGAGACGAGCCGGAGACGGCGGTGACGGAGCTGGCGGGCGAGCTGAAGGCCAGGGTGAACGCGGCCGACGA
TCTCCAGTGGGAGGACTCGGCGGCGGAGCTCTCCGACGAGTCGCCGACGAAGAAAGGCAGGAAGGGGTTCGGCGGGTGGG
AGGGCAAGGTCAGGATCTTGGGGAGGCTTCGGAGCCTCACCAAGTCGGACTCCGGCCGGAGAGGCGTGTAGCTCCGATCA
CGTCTGACGTGCGTTTTAGGTTAGGCAACA-ATGGAGCGCATCTTCACAAGTTTAATGTATTGGTTTGACGGTTTCTTGT
AAGCTATAGTAGCCATGATCGACGGCTTCATGGCCGAGCAATATTCGAACCTCGCTCTGCGCGCGCACGTACCGGCGTAC
GGCACCGGACTGGACGGCTTATAC--------TTGCCCAGCACGAGCCTCCCCTCCCCTCCCCTCCCATCCCACGTATAC
TTGAACCTCGCCCATACCTTCCTTCTCACGTAGCCTCGCTTACGGGAGCTGGCGCCGGTTGCACCATGACCGGCGACGAG
CACGCCGGCAAGGCGCGTCCAGCCCGCGGGATTCGTTCCTTTCGAACCTGCAGAATTCTATGGATCTTCGTCGAAATATC
ACTGGGAATACTGGTGATCTTCAAGAACCTGTGGATTCGGCTACGGTTGGCAGAAGCACAGCTCACGCTGACGCCTCCCT
CCGCCGGCGCCGCGGGCACGACGACCATGACGGCCGCGCGAGTAGCCGACATATTCGCCATGATCGACGTCCACGCCGCC
GCGGGGACAATGAGCGGCAAGCTGGTCGAGGCAATATGCGCCATGATCAACGATGCCTGCCACGACGACGACGCAAAGGA
CTTGCATGGCCAGAAAGGGAGAAGGCGGCGCGAGCGCGACGCCTGCATCGGCAGCACCCGCTGCTACAAGCAGATGCGCA
GGCTCGGCAAGGGCTCCAGCGGCCGCGTCGTCATGGCGCAGCACCGCGACACCGGCCAGACGGTCGCCCTCAAGACCATC
CACGCGCGCGGCGGCGCGAGGCGCCCCAACGTCGGCGATCTGCTCAAGGAGGCCTGCGTCCTGGCGGCGTGCCGCGGGCA
CCCCAACCTCGTCGGCCTCCACGCCATCGTGCGCGACCCAGGCACCAGGCAGTACTGCCTCGTCATGGACTACGTCGGGC
CCAGCCTGTTCCATGCTCTGGACAGGCACGTGGAAGAGCACGGCCGCGCGTTCCCGGAGGCCGACGTGCGCCGGGTCATG
CGGCAGCTGCTCACGGGCGCCGCGGCGATGCACGAGCGCGGCGTCATTCACAGGGACATGAAGACTGCAAACATCCTCAT
CGG---AGAAGACGGCGGCGTCGTGAAATTCTGCGACTACGGACTGGCGATGCCCACGGCCAAGGCAGAGCCGCCGTACG
GGCTGGCCGGGACGATCCCCTACATGGCGCCCGAGATGCTGCTGGAGAAGCCGGAGTACGACGCGGCCGTCGACATGTGG
TCGCTCGGGTGCGTCATGGCAGAGATGCTCTCCAGCGAGGAGTTGTTCAGCGGCGAAAAGACGACGGGGCAGGTCGGCAA
GATATTCGATGTACTCGGTGCGCCGGGCAAGAAAACGTGGCAGCACTTCGAGTCCGCGCTCCGAGCTGACGAGGTGCGGC
AATGGCGGGCACGGCAGCGAGAGGTGCGGCGCCAC---GACCGGCTGCGAGAGCTGTTCCCCGAGGAGCTGCTGTCATGG
CACGGATACCATGTCTTGAAGGGCCTCCTTACCTGCAACCCCAGCAAGAGGCTGACAGCAGCCGCCGCGCTCCGGTGTCC
CTGGTTCAAGGTCGACGGCCCTGGAACTGATGATGCTTCCGGTCACGGGATCGGCGGCACGGCATTAGCCAGGCACACTG
CATAGAGAGGAGCAGCAATAGTTAGATGAATTCGCCACACCGGAAAAAAACAACTAAACTGACGAAAAAACAGCGAAGGA
ATAAATAAGAATGTATATGGCTTGTTTATTACGATCGGAAATGTACAAATATCATAACTCTACTGGAGTGGATTGTACGA
TCTAGGCGATTACTTCAATTAAAGTGTCATCAAAACGAATCACTTGCATGTGAAAAACGCAGAAGTAGATAACATAGTCA
CTTACATATGAAAAACTTTGTTCAAACTTCAAAGAGATAATCTAAGTCT--TCTAACTTCGAATGAGTGGGTATACTGCA
GACAGAGTAAATTTTTCCTTGACAGTACA--------------------------CAGAAAAAATGCTTGCAGAACCAGG
TGTGGTATTTCATAAGATAACAAAAGCAACACTGTCACATATGGATTTGCTTACCATCGAGGGCAGTGGTGGCAGCATGG
TCTGTTGCCTCCATCAGTTCTAGTCCAGGTGTCTGCAGCCTGAAATCACTCAGAAATAAATCTCAAAAAAGAACATCAAG
AAACAGAAGCAAACCAAATCTGGCAATCCGATCTTATACCCATTCTTAACCACATTTGAACTGAAATTGACTAGTCTGCA
T---TTAAAAATTAATGAGAACACACCACAGCTCAAACCAAAACATTTATGCCTGATAATAAGCAACTAGGCACAAAGCT
AACATCATAGCTGGTGCAAAAAATAGCATAAGAACCACCGTTCAGTTGCCTGCCATGCTTTACAGAACATGATTAGGGTA
TCCTTCCATCCAAGGTTCCAATTATTTACCCTGTCAGGGTAACTCAAGTTTGAACAAAGACCGGTGGTAATAAGCACAGC
GCACCAAAAGCACAATCAACGCTTCTTCGGTGCAGCAGATTTGGGAGGAGGCGCAGGAAAACCTGCAGTCTTTGGCGGCG
ACGACATCATCACCCTGTGCTTGTACATCTTCCACCAGTTCGCTGATGCCTCGTCGACAGTCCGGTAGGTCCAGAAGTGC
GGCCTGG
>SNPs
-----------------------------S--------------------------------------------------
---------------------------------------------------------------S--S---S---------
-------------S-----------------------------------------------S------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
----------------------------S-S--S-S-------------------------S------------------
-------------------------------S------------------------------------------------
----------S----------------------------------S--------------S-------------------
---------------------------------S-------------------------------------S--------
-----------------------------------------------------S--------------------------
----------------------------------------------------------------S---S-----S-----
-----S---------------------------------------------------------------S----S-----
----------------------S-------------------------------------S------------------S
----------S---------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------S-----------------------S-----------------
---------------------S----------------------------------------------------------
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---------------S--------------------------------S-------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
----S-------S----------------S------S-----------S-------------------------------
----------S--S-----------------S-S-SSS------S-S--------------------S------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-S------S-----S-------S
------------------------------------S-------------------------------------------
---------S----------------------------S---------------------------S----S--S-----
---------------------------------------------S---SS----------------S------------
--------------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------
-------------S------------------------------------------------------------------
-------S--------S------------S------------------------S------S------------------
--------------------------------S----------------------S------------SS----------
-SSS----------------------------------------S-------S---------------------------
----------------------------------------S----S-------------------------S--------
------------------------------------S-------------------------------------------
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>forward_30
----------GCATCATCGTGTTCACGACC--------------------------------------------------
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>reverse_1956
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-----------------------------------CATGACCGGTTACGAGAGCT-------------------------
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>forward_1616
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----------------------------------------------------------------------------TCCT
CATCGGAGAAGACGGT----------------------------------------------------------------
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>reverse_2670
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-----------------------------CGTCTGCAGCCTGAAATCAC-------------------------------
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