>input_sequence_59561
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-------------------ATGAGCCACGGCGTCGCGGCGAGGAAGCGGTTCGGCGGCGTCGGCTTCGCGCTCGGCTGCG
GCTGCAAGGACCCCAAGGCCGTGGCGGTC---------GCGGTGGCCGCCTCGTCGCCGCGCTCCGGCACGGAGGCGTCC
ACGGCGACCACGGCCACGTCGCGGAGGGCCAGCAGGACGCACCCGTCGGTGTCCACGTCCACCGGCACGCTCACCGTGCC
CTCCGCCTCCTCCTCCTTCCTCTGGGAGGA------------CGCCGACGCCGACGCCGACGAGGTCGAGTGCAAGCGGG
CGAGCTCCGCGACCACGCCCAGCTTCTCCGGCCTGCTGCGCGAGCTCAGCGAGCTCGAGCGGAGCATCAAGTCGTGCGCG
CGGACCAAGAGCCCCCCAAGAAAACACTTCTCGCCACCGCCGCCGCCCCCTCCTCCTCCACCGCCGCCCCCGCCGTTGCC
GTCGCGGCCCGTGCAGCGTCGAGCTGTGCGCAGCGACGACAAGCCCAGCATCCAAGAGGGCCACGGGGACTTCTCGCCGC
CGCGGCCGCGCCCGCTCCCGCCGCCGTCCGTGCAGGTCCCAACGCAGCAGCATCGGAGGGTGAAGAGCGTTGACAAAGCC
AGCAGGCAAGAAGGCGACGCGCACTTCACGCCACAGCCACCGCGACCGCTGCCCCCGCCGCCGCCGCTGGAGCCGGTCCG
GAGCGCCAAGGCCGAGGAGGACAATAATAAATCCAAGAGCAAAGAAGACGAGAAGCGCTCGCCGACACCGCCGCCGGCGC
CGAAGCACCGGAAAGCGATGAGCTGCGACAGCAACGGCAACGGCAACGGCTTCGGCGGCGGCGGCGGCAGCGGGAGGCTG
GACGGGAGCGTGGCGGTGGTGAAGCAGTCGGAGGACCCGCTGGGCGACTTCCGGCGGTCGATGGTGAACATGATCGTGGA
GAACGGGATCGTGACGGGGGACGAGCTGCGCGAGCTGCTCCGGCGCTTCCTGGCGCTGAACGCGCCGCGGCACCACGACG
CCATCCTCCGGGCCTTCGCGGAGATCTGGGACGAGGTGTTCGCCCCCGCCACGGA------------------------G
CCGGCCGCCAGGCCGACGGCGCCCCGGCAGAGGACGCCGCCCCGCCGCCGGCAACCCCTGCCTCCCCCGGCGTGGCGCGT
GTAG----------------------------------------------------------------------------
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>chr2A_1_TraesCS2A01G396600
AGCCGCTACAGAACCTACTACAGCGATCGGCTTTGATTAAGATAAGAAATCACCTCCTTGGCGCTGTGGTAGCATCGGGT
ACACTCACGATCGGAAGATTCGGTCGATGGGTCGATCACTCCGGCCAACGGCGGGCACATGCGAGCCCGCCCGAAAGTCG
CAGAAATCCAGCGGAACCGGTGGCCTTGCTCCCCCGCTCCCAGGTGAGGACAAGCGGCTCCATGGCGGCCGGCCCGCGGC
ACCCTCCATTCCTGACCCGAGTCCGAAGGAACAATCGGAGCACAAAATCTATCCTGGTTCTACGCCAGACAGGTGCGGCA
GACCCATGGCAGGGACCATCCCAGTTGTAGCTCCACGGTGCGAGTGCGTCCATATGTA-ATGTACGACTGCACATGCGCG
GGGGCATACATAACACGTACCCGTACCCCTACCCCTACGTGCGCGTAATGAGTAC-ACGACAGCGCCACTGTTGGT----
-------GTATTCTGTGGGAGTGGTTCCGCTGTATCTGTCCAACATCGCCGCGAAGGGCACGGCTCACTGGCCGGCGTAA
TGAGGACGAGCT-------------ACAATGGCCGGTCAGCTTTCCGTTCTGCGCGTATTTATTGCTCGTCGCGACAGTG
GTTTGGAGATTGGAGGAGATCTGCTTCACGGCCTAGTAAATTA-------------------------------------
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------------------------------------------------TTAGCTTAGCTTAGCGGAGTATCCGATCCAAC
TGACCATCAGTCGTGTCTTTAAGCGAAAGGGGGACGGACGGACGGTGCGGATCGCGCGTCGTCACGTCTACTGTATCCGT
CCGCGTGCGCGTACGCAGTGGCAGTGCTACATGTACTCTACTACATGCGACGCAGCTGAGCTCGGTAGCTTCTTCGTCGC
TGGCTTCATAACTTCGTAACTCGGGGGTCGGGAGCGAGGGGAGCGAGCCACCATATGCCACTGTGAGCTGCCTGCGCCTC
TGCGATATAA----------GGCCGGCCGGCCACCGTCCAAGATCAC-----TGTGGGAAGCTGCGAGTGACCGGGAGCG
ACA-------------GGGATGAGCCACGGCGTCGCGGCGAGGAAGCGGTTCGGCGGCGTCGGCTTCGCGCTCGGCTGCG
GCTGCAAGGACCCCAAGGCCGTGGCGGTC---------GCGGTGGCCGCCTCGTCGCCGCGCTCCGGCACGGAGGCGTCC
ACGGCGACCACGGCCACGTCGCGGAGGGCCAGCAGGACGCACCCGTCGGTGTCCACGTCCACCGGCACGCTCACCGTGCC
CTCCGCCTCCTCCTCCTTCCTCTGGGAGGA------------CGCCGACGCCGACGCCGACGAGGTCGAGTGCAAGCGGG
CGAGCTCCGCGACCACGCCCAGCTTCTCCGGCCTGCTGCGCGAGCTCAGCGAGCTCGAGCGGAGCATCAAGTCGTGCGCG
CGGACCAAGAGCCCCCCAAGAAAACACTTCTCGCCACCGCCGCCGCCCCCTCCTCCTCCACCGCCGCCCCCGCCGTTGCC
GTCGCGGCCCGTGCAGCGTCGAGCTGTGCGCAGCGACGACAAGCCCAGCATCCAAGAGGGCCACGGGGACTTCTCGCCGC
CGCGGCCGCGCCCGCTCCCGCCGCCGTCCGTGCAGGTCCCAACGCAGCAGCATCGGAGGGTGAAGAGCGTTGACAAAGCC
AGCAGGCAAGAAGGCGACGCGCACTTCACGCCACAGCCACCGCGACCGCTGCCCCCGCCGCCGCCGCTGGAGCCGGTCCG
GAGCGCCAAGGCCGAGGAGGACAATAATAAATCCAAGAGCAAAGAAGACGAGAAGCGCTCGCCGACACCGCCGCCGGCGC
CGAAGCACCGGAAAGCGATGAGCTGCGACAGCAACGGCAACGGCAACGGCTTCGGCGGCGGCGGCGGCAGCGGGAGGCTG
GACGGGAGCGTGGCGGTGGTGAAGCAGTCGGAGGACCCGCTGGGCGACTTCCGGCGGTCGATGGTGAACATGATCGTGGA
GAACGGGATCGTGACGGGGGACGAGCTGCGCGAGCTGCTCCGGCGCTTCCTGGCGCTGAACGCGCCGCGGCACCACGACG
CCATCCTCCGGGCCTTCGCGGAGATCTGGGACGAGGTGTTCGCCCCCGCCACGGA------------------------G
CCGGCCGCCAGGCCGACGGCGCCCCGGCAGAGGACGCCGCCCCGCCGCCGGCAACCCCTGCCTCCCCCGGCGTGGCGCGT
GTAGTGCCGCATCACGTACGTACGTGGCCGATTCCTGCAATGTAGTACGTAGCTGCTCCTGGTAGATTGCTTCCAAGAAG
AAATCGTCG-----GTCTCGGCTGATAACACGAATCTACCTGGTGCCCCCTGTTCAT------CCAGCACACACTTTTTG
GTTTGAATGTCCACTCACCACTGACACACACTT-----GTACCACCACCACTTT-CCGCTTTCTAGCATGGGTACGTAGG
TTCAAAATTTCGATTTTGCGACACGTCTGGCACTGGTAGGGAGGAA-CCCCGTGAGAGCTGAATGCCAGGGGGCACGGGC
CACGAGACGTTCTAGGGCGCGTCAACCCCGTGGCCGCTTGCGCGCGCCGTGCCGTGGCAAACCGCACGCAAACAGGCGGA
AAAAGGGCGGCTTTGGCCCGCGCGA--------------------------------GGGAGCCTGAAACGGAGGGCCCG
TGCGCGGAGTTATGGGG-----GGTGGTGGAGGTGGTGGGTGCAGGGTGCCACGGCCGCTGCCGCTGCCGCGCACGGGAG
GGCGGACGTTAACGCGAGGGGAACCTGCTGATGGTGCCCAAACACGGGACATCAATGCGCAACCTCTTTCTCCATCCGGA
AATGCCAGGACTTT--AACTCCGTCCACCGCCAGGCTTCCGTTTCCGCTCCTCGGAGGAATTTCACACGTCTCGCTGTCG
TTGACGGCCTGACGAGTAGCTAAAT-------------------------------------------------------
----------------------------------------------------GCTGAAGCTAGCCAGGCGCACGATGCAT
GGCTGGCTAGCACCGCCTTATCTATCTGCATGGGGACGAATGGTTCTTGTTGCTTTATCACGTGGGAGTGGTCGATGCGG
ACACG----GAGAGAACAAGCTCGTCCAACTGGCGGACACGGAATCGAAAGAGAGGAGACGACAACGCCGGTCCATCC--
--AGTTTGGGCCTTCCCCCGTGTATAAGGCCAGCGCCACCGC------AGCTGATGTGCCAGTTAGTTCAGGACAGTTAC
TTTCGTGCCAGCCGGCACGCCCCGTACGCTTTTCTCTGCGGTGGAGGTCGACGAGGACGCCA
>chr2D_1
AGCTGCTACAGAACCTACTACAACGATCGGCTTTGATTGAGATAAGAAATCACCTCCTTGGCACTGTGGTAGCATCGGGT
ACACTTGCAATTGGAAGAT----TCGATGGGTCGATCAGTCCGGCCAACGGCGGGCACATGCGGGCGCGCCCGAAAGTCG
CAGAAATCCAGCGGAACCGGTGGCCTTGCTCCCCCGCTCCCAGGTGAGGACAAGCGGCTCCATGGCGGCCGGCTCGCGGC
ACCCTCCATTCCAT-------TCCGAAGGAACAATCGGAGCACAAAATCTATCCTCGTTCTACACCAGACAGGTGCCGCA
GACCCATGGCAGGGACCATCCCAGTTGTAGCTCCACGGTGCGAGTGAGTCCATATGTCCATGTATGATTGCACATGCGAG
GGGGCATACATAACA------CGTACCCATACCCCTACGTGCGCGCAATGAGTACCACAACAGCACCACTGTTTGGTGTA
TTCTGTATTCTGTA--GGGAGTAGTTCTCCTGTATCTGTCGAACATCGCCGCGAAGGGCACGGCTCACTGGCCGGCTTAA
TGAAGACAAGCTGCGCTGCGCAGCTACAATGGCCGGTCAGCTTTCGGTTCTGCGCGTATTTATTGTTCGTCGCGACAGTG
GTTTGGAGCTTGGAGGAGATCTGCTTCACGGCGTCG-AAATTA-------------------------------------
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------------------------------------------------TTAGCTTAGCG---------AGCTGATCCAAC
TGACCATCAATCGTGTCTTTAAGCGAAAGGTGA----ACGGACGGTGCGGATCGCGCGTCGTCACGTCTACTGTATCCGT
CCGCGTGCGCGTACGCAGTATTAGTACATGTA---------TACATGCGACGCAGCTGAGCTCGGTAGCTTCTTCGTCGC
TGG--------CTTCATAACTCGGGGGTCGGGAGCGAGGGGAGCGAGCCACCATATGCCACTGTGAGCTGCCAGCGC-TC
TGCGATATAAAGGCCGCCCCGGCCGGCCGGCCACCGTCCAAGATCCCTGTGGTGTGGGCAGCTGTGAGTGACCGGGAGCG
ACACGACGCGCGCGAGGGGATGAGCCACGGCGTCGCGGCGAGGAAGCGGTTCGGCGGCGTCGGCTTCGCGCTCGGCTGCG
GCTGCAAGGACCCCAAGGCCGTGGCGGTCGCGGCGGCGGCGGTGGCCGCCTCGTCGCCGCGCTCCGGCACGGAGGCGTCC
ACGGCCACCACGGCCACGTCGCGGACGGCCAGCAGGACGCACCCGTCGGCGTCCACGTCCACGGGCACGCTCACCGTGCC
CTCCGCCTCCTCCTCCTTCCTGTGGGAGGA------------CGCCGACG------------AGGTCGAGTGCAAGCGGG
CGAGCTCCGCGACCACGCCCAGCTTCTCCGGCCTGCTGCGCGAGCTCAGCGAGCTCGAGCGGAGCATCAAGTCGTGCGCG
CGGACCAAGAGCCCCCCAAGAAATCACTTCTCGCCACCGCCGCCGCCTCCTCCTCCTCCACCGCCGCCTCCGCCGTTGCC
GTCGCGGCCCGTGCAACGTCGAGCTGTGCGCGGCGACGACAAGCCCAGCATCCAAGAAGGCCACGGCGACTTCTCGCCGC
CGCGGCCGCGCCCGCTCCCGCCGCCATCCTTGCAGGTCCCAACCCAGCAGCATCGGAGGGTGAAGAGCGTTGACAAAGCC
AGCAAGCAAGAAGGCGACGCGCACTTCACGCCACAGCCCCCTCGCCCTCTGCCCCCGCCGCCGCCGCTGGAGCCGGTCCG
GAGCGCGAAGACCGAGGAGGACAATAA---ATCCAAGAGCAAAGAAGACGAGAAGCGCTCGCCGACACCGCAGGCGGCGC
CGAAGCACCGGAAAGCGACGAGCTGCGACAACA---GCAACGGCAACGGCTTCGGCG------GCGGCAGCGGGAGGCTG
GACGGGAGCGTGGCGGTGGTGAAGCAGTCGGAGGACCCGCTGGGCGACTTCCGGCGGTCGATGCTGAACATGATCGTGGA
GAACGGGATCGTGACGGGCGACGAGCTCCGCGAGCTCCTCCGGCGCTTCCTGGCGCTGAACGCGCCCCGGCACCACGACG
CCATCCTCCGGGCCTTCGCGGAGATCTGGGACGAGGTGTTCGCCCCCGCCGCCGCCGCCACGGCCGGCCGCGAGCCGGGG
CCGGCCGCCAGGCCGACGGCGCCCCGGCAGAGGACGCCGCCCCGCCGCCGGCAACCTCTGCCTCCCCCGGCGTGGCGCGT
GTAGTG----------------GTCGATTCGTACAAT------------------------GTAGATTGCTTCCAAGAAA
T---CGTCGAGACGATCTCGGCTGATAACACGAATCCACCTGGTGTCCCTTGTTCATCCAGGGCCAGCACATACTTTTTC
GTTTGAATGTGCACTGACACGCACTCGTACTGCTACCAGTACCACCACCACTTTACCGCTTTCTAGCATGGGTACGTACG
TTCAAAATTTCGATTTTGCGACACGTCTGACGCGAA-------GAACCCCCGTGAGAGCTGAATGCCAGGGGGCACGAGC
CACGAGACGTTCTAGGGCGCGTCAACCCCGTGGCCGCTTGTGCGCGCCGTGCCGTGGCAAACCGCACGCAAACAGGCGGA
AAAGGGGC-GCTTTGGCCCGCGCGCGAGGGGGGACGGTGGAATCAGGGATAGAAAGCGGGAGCCTGGAACGGAGGGCCCG
TGCGCGGAGTTATGGGTGTGGTGGAGGTGGTGGTGGTGGGTGCAGGGTGCCGCTGC--------CTGCCGCGCACGGGAG
GGTGGATGTTAACGCGAGAGGAGCCTGCTGATGGTGCCCAAACACGCGCCATCAATGCGCAACCTCTTTCTCCATCCGGA
AATGCAAAAGCTTTAAAACTCCCTCCACCGCAAAGCTTCCGTCTCCGCTCCTCGGAGGAATTTCAGACGTCTCATTGTCG
TTGACGGCTTGACGCGATGAAAGAGTTTTCATGTGTAGAAAGAATGCCAGGACTTTCAGCTGTTTAATG-----------
---------------TGCACCCACACTCACAGTCACAGAGCTGTGATGGTCAGCTAAAGCCAGCGAAGCACACGATTCAT
GGCTGGCTAGCCCTGCCT----TATCTGCATGGGGACGACTGGTTCTTGTTGGTTTATCACGTGGAATTGGTCGATACGG
ACAGGGAGAGAGAGAACAAGTTCGTCCAACTGGCACGGGATCGG----------AGAGACGGTAACGCCGGTCCATCC--
--AGTTTGGGCCGCCCCCCGTATATAACGCCAGCGCCACCGC------AGCTGATGTGCCAGTTAGTTCAGGACAGTTAC
TTTCGTGCCAGCCGGTACACCCCGTACGCTTTTCTCTGCGGTGGAGGTCGACGAGGACGCCA
>chr2B_46
---------------------------------------------GAAATCACCTCCTTGGCACTGTGGTAGCATCGGGT
ACACTCACGATTGGAAGAT----TCGATGGGTCGATCAGTCCGGCCAACGGCAGGCACATGCGAGCGCGCCCGAAAGTCG
CAGAAATCCAGCGGAACCGGTGGCCTTGCTCCCCCGCTCCCAAGCGAGGACAAGCGGCTCCATGGCGGCCGGCTCGCGGC
ACCCTGCATTCCAT-------TCCGAAAGAACAATCGGAGCACAAAATCTATCCTGGTTCTACACCAGACAGATGCCGCA
GACCCATGGCAGGGACCATCACAGTTGTAGCTCCACGGTGTGAGTGAGTCCATATGTCCATGTATGATTGCACATGCGAG
GGGGCATACATAACA------CGTCCCCCTATCCCTACGCGCGCGCAATGAGTACCACAACAGCACCACTGTTTGGTGTA
TTCTGTAGTATTCTGTAGGAGTAGTTCTCCTGTATCTGTCGAACATCGCCCCGAAGGGCACGGCTCACTGGCTGGCTTAA
TGAGGACAAG-------------CTACAATGGCCGGTCAGCTTTCGGTTCTGTGCGTATTTATTGTTCGTCGCGACAGTG
GTTTGGAGCTTGGAGGAGATCTGGTTCACGGCGTAGTAGTACGTCGAAATCTCTACTCCTAATAGATGAATTGGTTGAAT
AGTCCCCTCACTTTCAACCGGTTTATTTTCAACCGGTTTTTCTTCGTCCCATCTTCCACCAGCCCCTCCCAACGGTTTTT
CTCTTTTCTCGTCTGACCGGCAATACCCAACGTATTTATGGTAATCAATCATAATTAATCCACGTATAGTAATAAATCAA
TTCAGGTATGGTAAGGTCATAACTCAGGAAATTTTGAATATGGCAATTATATGGTAATAAATTTAAATTACCCCAAAGGC
TATCAATCCAGATATGGTAAGGCCATAACTCGGGAAATATCGAATATGGTAATAAATTTAAATTACCACCAGGTATGGTA
AGGCTATCCACGTATAGTAATAAATCATGTAGTAATAAATCATAATTAATCCACGTATAGTAATAAATCAATCCAGGTAT
GGTAAGGTCATAACTCAGGAAATTTTGAATATGGTAATAAATTTAAATTACCCCAAAGGCTATCAATCCAGGTATGGTAA
GGCCATAAATCGGGAAATATCGAATGTGGTAATAAATTTAAATTACCCCAAAGGCTATCAATCCAGGTATGGTAAGGCCA
TAACTCGGGAAATATCGAATATGGTAATAAATTTAAATTACCACTAGGTATGGTAAGGCTATCCACGTATAGTAATAAAT
CATAATTAATCCACGTATAGTAATAAATCAATCCAGGTATGGTAAGGTCATAACTCAGGAAATTTTGAATATGGTAATTA
TATGGTAATAAATTTAAATTACCCCAAAGGCTATCAATCCAGGTATGGTAAAGCCATAACTCGGGAAATATCGAATATGG
TAATAAATTTAAATTACCACCAGGTATGGCACGCCCTCACCTGATCACCTATCACAATCTCCAGCCCCACGCACGCACCA
AAGAACCCACCCGGCACCAAACGCAGCTCCTCTCGACCCCCTCGAGTAAACGCCGCCACCGTCGTGCGATCTTCCTGACA
CAAACGCCGTCGCCGCCTCCTTCCCACCTACGGCGTCCCCCACATCCATGGTGACGGCGCTCGCGTCCTACACTGACCCT
CCGCCTCATATAGGTTGGTCGTTGATGGAGTGGGATGTGCCGCTACGGTTTGGGGAGGCGCAATCACGATCTGGTTGGGA
TCTCAGTGTGGGCTCATTCTCTATGATGAAGGATGGCGCTGCCTCCCTGGCAAATGGGATCGGAGGAAGGGGCTCTACGT
CGTGAATGTCGGCGAGGCAGCGGCCGAAGGTGAGCCCGACGGTGAGCACGGGTGTTCGTCCCATGAAATAGGCGGCCATG
GAGGGCGGATCTGAGGCCACCCCAATCGCCGGTGGCCCTTTCTCCCATCGCTCATCGCCTCCATTCTCTCTCTCCTCTAA
ATCTTTGTCGCCCCTGCCTGATTCTGGCCGACGCCATCCGGCTCTCGCATCGACCACCACCAGCACGGCTGCGGACGAGG
CGCAACCGCAGACGCCGCCGCCGCCATCCTCATCCACCTCCTCCACCATAGTGCCAGTGATCCAAAAATCATAGGGCCTG
GATATAGCTCTAGAAGACGTATGCGGCTTGCGCATCGAGCTTGGTCGTCTCGAGTATGGAGATAGGCGAGTTGTAGACCA
AGAGCTGGTACAGAGATAGACAAGTTGTAGACAAGAGCTGGTGGGCAGCAAGAAACGCATGCACACCAAAGAACAAATCT
GAGTCACATGCCTACTTCTATTGGTTTCTACAAAGAGCGGCTAGCTTAGATCTTAGACCAGTCGGTCACTGTCGAGGTCG
TCAAGGTGATCTTACAGCACCGCCGTGGGGATTTCTCATGATTTTATGTAGGCAAGCCGCAAGCGGTGGTGGTGATTGGC
TGGGTGGTGTCGCTGCCTTGGGAAGAGACGAAGTGATGGTAAAAGTAAGCAGGATCCGATGATTCTTCCGTGGGGATAGC
CAAAGTCAAGATGTCGACTACAGACTCGTCGCAGACTTGCAGTGAACCTGGATGCTGCAAGCCTGATTTGTGGATCGATG
GCGGGTCTTGACTTTGTTAGGCCGGGATTGGATGGTTGCGGAGGGTGGTGTGCTTGATTGGGTTCTCATGGAAGAATGTG
GCCTCCTCGTGGATCTGGTCATGCCCATCCTAGAGAACATTGTGTCCCTAGCTCCCTCGAGGAGCAAGGACAATGCAAGC
TGCAGCAGGGGGTAGTGGTAGATGTGGGGAGGGATGTCGGCGGCTGCTCGAGGTCATCATGATGAAACCCTTGACGTCCC
ATCTTTATCAATGGAAGTGGAAGAGCACGAAGTCGAGATTGGATAGGAGTTTGAGTTCTTTTTGGCACCGATCGGTTCCC
CACTTTAGAGATGTATTTTTTTGCGTGCGAGCAAACAGTGGGTTGATTCTAAAAGGGATAGGCACTTTTCAACAGAAGTG
CATGACGGACCAAAAATATGACCTCATTTTATTTGTTTGATAGATATCGTATTATTCGTTGTTGTTCGTTCGGTGAAATT
TCCTAATATTTGATTGCTGTGTTTCTAATTAGAGCACCCCATAATCACCCAATATGAGGGAATGATAAATGAAAGATACT
AATTATAAATTTTAAAGAGCCCGTGGCAACGCACGGGCGTTATACTAGTTAGCTTAGCT---------ATCCGATCCAAC
TGACCATCAATCGTGTCTTTAAGCGAAAGGGGA----ACGGACGGTGCGGATCGCGCGTCGTCACGTCTACTGTATCCGT
CCGCGTGCGCGTGCGTACGCGGTAGTACTACATG-------TACATGCGACGCAGCTGAGCTCGGTAGCTTCTTCGTCGC
TGG--------CTTCATAACTCGGGGGTCGGGAGCGAGGGGAGCGAGCCACCATATGCCACTGTGAGCAGCCAGCGT-TC
TGCGATATAAAGGCCGCCCCGGCCGGCCGGCCACCGTCCAAGATCCCTGTGGTGTGGGCAGCTGCGAGTGACCGGGAGCG
AC---ACGCGCGCGAGGGGATGAGCCACGGCGTCGCGGCGAGGAAGCGGTTCGGCGGCGTCAGCTTCGCGCTCGGCTGCG
GCTGCAAGGACCCCAAGGCCGTGGCCGTCGCGGCGGCGGCGGTGGCCGCCTCGTCGCCGCGCTCCGGCACGGAGGCGTCC
ACGGCGACCACCGCCACGTCGCGGAGGGCCAGCAGGACGCACCCGTCGGCGTCCACGTCCACGGGCACGCTCACCGTGCC
CTCCGCCTCCTCCTCCTTCCTGTGGGAGGATGCCGACGCCGACGCCGACG------------AGGTCGAGTGCAAGCGGG
CGAGCTCCGCGACCACGCCCAGCTTCTCCGGCCTGCTGCGCGAGCTCAGCGAGCTCGAGCGGAGCATCAAGTCGTGCGCG
CGGACCAAGAGCCCCCCAAGAAATCACTTCTCGCCACCGCCGCCGCCTCCTCCTCCTCCACCGCCGCCCCCGCCGTTGCC
GTCGCGGCCCGTGCAGCGTCGAGCTGTGCGCGGCGACGACAAGCCCAGCGTCCAAGAAGGCCACGGAGACTTCTCGCCGC
CGCGGCCGCGCCCGCTCCCGCCGCCATCCTTGCAGGTCCCAACGCAGCAGCATCGGAGGGTGAAGAGCGTTGACAAAGCC
AGCAAGCCAGAAGGAGACGCGCACTTCACGCCACAGCCACCTCGGCCGCTGCCCCCGCCGCCGCCGCTGGAGCCGCTCCG
GAGCGCGAAGACCGAGGAGGATAATAA---GTCCAAGAGCAAAGAAGACGAGAAGCGCTCGCCGACACCGCAGCCGGCGC
CGAAGCACCGGAAAGCGATGAGCTGCGACAACA---G------CAACGGCTTCGGCG------GCGGCAGCGGAAGGCTG
GACGGGAGCGTGGCGGTGGTGAAGCAGTCGGAGGACCCGCTGGGCGACTTCCGGCGGTCGATGCTGAACATGATCGTGGA
GAACGGGATCGTGACGGGGGACGAGCTCCGCGAGCTCCTCCGGCGCTTCCTGGCGCTGAACGCGCCCCGCCACCACGACG
CCATCCTCCGGGCCTTCGCGGAGATCTGGGACGAGGTGTTCGCCCCCGCCGCCGCCGCCACGGCCGAGCGCGAGCCGAGG
CC------------------------------GACGGCGCCCCGCCGCCGGCAACCTCTGCCCCTGCCGGCGTGGCGCGT
GTAGTGACAGATCACGTACGTGGTCGATTCGTACAAT------------------------GTAGATTGCTTCCAAGAAA
C---CGTCG-----ATCTCGGCTGATAACACGAATCTACCTGTTGTCCCTTGTTCAT------CCAGCACACACTTTTTC
GTTTGAATGTCCACTGGCACGCACTTGTACTGCTACCAGTACTACTGCCACTTT-TTGCTTTCTAGCATGGGTAC----G
TTCAAAATTTCGATTTTGCGACACGTCTGGCAGGAA-------GAA-CCCCGTGAGAGCTGAATGCCAGGGGGCACGAGC
CACGAGATGGTCTGGGGCGCGTCAACCCCGTGGCCGCTTGTGCGGGCCGTGCCGTGGCAAACCGCACGCAAACAGGCGGA
AAAAGGGC-GCTTTGGCCCGCGCGAG-GGGGGGACGGTGGAATCAGGGA--GAAAGCGGGAGCCTGGAACGGAGGGCCCG
TGCGCGGAGTTATGGGTGTGGTGGAGGA------GGTGGGTGCCGGGTGCCGCTGC--------CTGCAACGCACGGGAG
GGCGGACGTTAACGCGAGAGGAACCTGCTGATGATGCCCAAACACGCGCCATCAATGCGCAACCT----CTCCATCCGGA
AATGCCAAGACTTT--AACTCCTTCCACCGCAAAGCTTCCGTCTCCGTTCCTCGGAGGAATTTCATACGTCTCGCTGTCG
TTGACGGCTTGACGCCTACTCGAGT-----------------------AGGAGTTTCAGGAGTTCAATTGTGCAGATATA
AATGGTCCGTGAAACTGCACCCACACTCACACTTC--------TGATGGTCAGGTAAAGCTATAGC-----------CAT
GGCTGGCTAGCCCTGCCT----TATCTGCATCGGGAGGAATGGTTCTTGTTGTTTCATCACGTGGGGGTGGTCGATGCGG
ACACG----GAGAGAACAAGCCCGTCGGCCGCACGAGCCACGGGATCGAAGAGAAGAGACGACAACGCCGGTCCGTCCAT
CCAGTTTGGGCCGTCCCCCGTGTATAACGCCAGCGCCACCGCCACCGCAGCTGATGTGCCAGTTAGTTCAGGACAGTTAC
TTTCGTGCCAG---------------------------------------------------
>SNPs
---S------------------S---------------S-----------------------S-----------------
-----------S-------SSSS---------------S---------------------------S-------------
-------------------------------------------------------------------------S------
------------SSSSSSSSS------------------------------------------S------------S---
----------------------------------------------S----------S------S--S----------S-
---------------SSSSSS------------------------S------------S-----S--------S-S----
----------------------S----SS-----------S-----------------------------------S---
-------S-------------------------------------S-------------------S--------------
--------S-----------------------S-----------------------------------------------
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-----------------------------------------------------------SSSSSSSSS------------
---------S----------------------SSSSS-------------------------------------------
-------------------S-S---S-SSSSSSSSSSSSSS---------------------------------------
---SSSSSSSS----S--------------------------------------------------------S----S--
---------------------------------------------S------------S---------------------
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-------------------------------------------------S------------S-----------------
---------------------S----------------------------SSSSSSSSSSSS------------------
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-----------------------S-----------------------S--------------------------------
-------------------------------S-------------------------S--------S-------------
-------------------------S---S--------------------------------------------------
----S------------------------------------S--S-----------------------------------
------S---S----------------SSS-----------------------------------------S--------
------------------------------S--SSS---------------------SSSSSS-----------------
---------------------------------------------------------------S----------------
---------------------------S--------S-----------------------------S-------------
--------------------------------------------------S-S-S-------------------------
--------------------------------------------------------S-----------------------
------S-SS-----------SSSS-SSSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSS------------------S
SSSS----------S------------------------------S---S-----------------------------S
---------------S--SSSSSSSSSSSSSSS---------------------------------------------S-
---------------------------------SSSSSSSSSS----------------------------------S--
----------------------------------------S---------------------------------------
--------S---------------------------------------------------------S-------------
----------------S-------S-----S--------------------S-S--SSSSSSSS----------------
------------------S---------------------------S-S-------------------------------
-------S--------------S--------S-S--------S----------------------S--------------
--------S-----S----SS-----------------------------------------------------------
-------------------------------------------------------S--------S-S--S------S---
-----------S-S----SSSS------------------------------S---------------------------
-----------------------------------SS-SSS-SSSSSS------S-------------------------
------------S--------------S----------------------------------------------------
---------------S--S-------------------------------------------
>forward_3529
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---------------------------------------------------------------------TTCTTCGTCGC
TGGCTTCAT-----------------------------------------------------------------------
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>reverse_4927
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----------------------------------------------ACGTAGCTGCTCCTGGTAGA--------------
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