>input_sequence_59545
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----------------------ATGGTCACAACCAAAGGTCAAATAAGAAACTACCAATGCTGCTAACGTAGCTATATCT
TT----CTTTCATGAGCATTGCCTTTTGCTCTATTATTATGCTAAT----------------------------------
-----------------------------------TGACTCATCATGTATGAGCATATACAGCCATGAAGGGAACCGAAG
ACTCAGCTTTGGATCGAAGCTTCTCCCCGCTGCTAATGTTTGGTCAAAAGCACCCTAGGCCTCACGGTACCAACGCTGAA
GATGACGAGGCCACGAAAAGAGGAGACGACGAGACGGCAAAAGACCCGCTGTTT---TTCTACAGCATAAGCAGGAGACG
CTCGGTGTGCAAGATTGTGGACGACCTGCGAGACCACTTGTACTGGACAACGCCGGGCGGCTGGCTGCTCATG------G
CGCACCCTGGCTCACGCCTGACGTTCCTGTGGAACCCGTTCACGCGCCAGAGAATCGGCCTGCCCCCTGATACAGAGAAG
TTCCTCACGAGGAACCCGGTCAGGTGCGCGTTCTCGCACGAGCCCACGGACCCAGCCTGCGTGGTGCTGGTGGTGAACCG
CGCCGACACGGTGCTCTGGTACTGCCGCCCGGGAGCGGGGGCAGCCGCCGAGTGGTCCGAGCACGGCTACTACCAG----
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-----------------------------------------------GCAGATGCAGGCGGCCTGGGCGCCCACCACGGC
CGTGACGACCTCATCCACG-------------------------------------------------------GGATGA
GCCTCGTGACGGCGGCGGGCGGGAAGTTCTACGCGAGCCTGCTGGGCGCCACCGTGCTGACGCTAGAGTTCTCGC-----
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------------------------CGGCGG---GTCCGGCCTTCACAGAAACCCCCA---TCGCCGAGCAGTCATGTC--
-A---CCCGATGTACCGCGCGTG----GAGCCTTCACCTGCTGGAGTCGCGCGGGGAGCTCTTCAGCGTCTCCTTGTACC
ACCCGCTGATGGAGCGGTGTGACAAGGTTGCCCAGATCGTCGTCCGCAGGCTCAACCTGCCGGCGAGGGCTTGGGTGGAG
GTGGACGCCATCGGGGATCGGGCCTTCTT---GGTCGACGCCGCCCGTTTTGGCGCGTCGGTCGGCGCGGAAGAGGCCGG
TCTCAAGGGGAACTGCGTTTACTATCTGAGGCGCGGAGAGAAGGGGCTGTATGTCTACGACCAATAATCCTACATCTACG
TAATGATCTACTTAACCTTAC-----------------------------------------------------------
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------------------------------------------------------------------------------GT
AACCTTCTTTAATCAA----------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr3B_1_TraesCS3B01G153000
TTTCGTTGGCGACTTTTGTTGTTCCGGTGCAAGTTCTTTATAGGGCTTAGTTGGATGAAGATTTGCGTGGTTCCATCATG
GGAAGAGTGATGATGGAGGAGCACCTTCAGTTTGATCCAGTGCTTGTAGTCATCGCTAGATGGCTGAGATGGTTATCTTT
GAATTTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACATGAACTTCAGCGAACATATCACACGAACACAAGAAGAACACATCGCT
CATGCCACACAAGGTGCAACTCAACCAGAGCACGCAGCCAAACATCGCGTCGTCCCAACAACAATTGAGGGTGAGGGTGA
GGGAGGGCGACACCTAGTCCTGGCCATGGGCAGCCCGGCCCGAACGGCCCGACCCGACGCTGCACCAGGGCCAGGCCCGG
GCCTAGATTTTGAGCCCGAAGGCCGGGCCGGGCTCTGGCCTAGGTTTTCTGCCTCGGGCTTTGGTAAGCCCGGCCCAGCC
CGGCAGATGGCCAGGTATAGCGACACCCGTGAGGCCGACGGCGCTCCTCCGCTTCCACAGATGCCAATAGCAAAGCAACA
CGAAGGCATTCAGAGTGGCTGCAATTCCTGCTAATCCATTGGATTTTTGTATTGCCATTGCATTTTATCTAATACAGACT
GGAGCATTTATCACGAAAAAGACTTTGG----------------------------------------------------
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---------TTTAATTAAAGAAAACCAATACGCATTATGCCATCTGACACGGAGGGGAGGGTCACA-TAAAAAGTGGTCC
TGCTAACAGCTTAACAAAACACATGGTCACAACCAAAGGTCAAATAAGAAACTACCAATGCTGCTAACGTAGCTATATCT
TT----CTTTCATGAGCATTGCCTTTTGCTCTATTATTATGCTAAT----------------------------------
-----------------------------------TGACTCATCATGTATGAGCATATACAGCCATGAAGGGAACCGAAG
ACTCAGCTTTGGATCGAAGCTTCTCCCCGCTGCTAATGTTTGGTCAAAAGCACCCTAGGCCTCACGGTACCAACGCTGAA
GATGACGAGGCCACGAAAAGAGGAGACGACGAGACGGCAAAAGACCCGCTGTTT---TTCTACAGCATAAGCAGGAGACG
CTCGGTGTGCAAGATTGTGGACGACCTGCGAGACCACTTGTACTGGACAACGCCGGGCGGCTGGCTGCTCATG------G
CGCACCCTGGCTCACGCCTGACGTTCCTGTGGAACCCGTTCACGCGCCAGAGAATCGGCCTGCCCCCTGATACAGAGAAG
TTCCTCACGAGGAACCCGGTCAGGTGCGCGTTCTCGCACGAGCCCACGGACCCAGCCTGCGTGGTGCTGGTGGTGAACCG
CGCCGACACGGTGCTCTGGTACTGCCGCCCGGGAGCGGGGGCAGCCGCCGAGTGGTCCGAGCACGGCTACTACCAG----
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-----------------------------------------------GCAGATGCAGGCGGCCTGGGCGCCCACCACGGC
CGTGACGACCTCATCCACG-------------------------------------------------------GGATGA
GCCTCGTGACGGCGGCGGGCGGGAAGTTCTACGCGAGCCTGCTGGGCGCCACCGTGCTGACGCTAGAGTTCTCGC-----
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------------------------CGGCGG---GTCCGGCCTTCACAGAAACCCCCA---TCGCCGAGCAGTCATGTC--
-A---CCCGATGTACCGCGCGTG----GAGCCTTCACCTGCTGGAGTCGCGCGGGGAGCTCTTCAGCGTCTCCTTGTACC
ACCCGCTGATGGAGCGGTGTGACAAGGTTGCCCAGATCGTCGTCCGCAGGCTCAACCTGCCGGCGAGGGCTTGGGTGGAG
GTGGACGCCATCGGGGATCGGGCCTTCTT---GGTCGACGCCGCCCGTTTTGGCGCGTCGGTCGGCGCGGAAGAGGCCGG
TCTCAAGGGGAACTGCGTTTACTATCTGAGGCGCGGAGAGAAGGGGCTGTATGTCTACGACCAATAATCCTACATCTACG
TAATGATCTACTTAACCTTAC-----------------------------------------------------------
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------------------------------------------------------------------------------GT
AACCTTCTTTAATCAAATTCTCTCTCGCCCCCCTGATTTCGCGGGGTGGGGCCCGGGTCGTTCTTCATCCAATCGTGTCT
TGCCAGACCAGCTTTCACGTAAGATTACGTTTGCCTTTTACGTAGATGTAGCAAAGCCCGTCTACGACATGGAGCGTGGA
ACTACTGCCATGCACGACCCTGGTCCGGATTTGCCCGATGATGCCACGGCTTTGATATTGATGCCCGCGGCTTGAAGCTT
CTGCCCTTGCTTTTTTTTTTTTAAT-GTTGTTTTCTGCATCTTGAAACCGGGAGTCGTTAAATATCGATTTTGCACAAGG
ACACACAAGTGCTTATCCCATCTAGATGACCTGTGGAACTATGCAAAGCTAGTCACAACGGTTTTCAGCAAGCGTTTTAA
CAGCATTTCTCTAGTA----------------------------------------------------------------
-------------------------------CAATTATATAGCTCAAAGACACAAAATCTTCTCTTCTTACAAAGGTCAC
ACTGTACTACGGTAGCTACCCAGCTCACTTCAAGCCTCCAGCTACAACAGCCCCATCGCCACACACATTCATGAAGATGG
CCAAGTTACACAGCAACTACGCTACCTCAGACAGTCTTGTATACATTCCACGGTTACAAAAAAGTTGCATTTTACAGTTT
GAGTACACGAGCAGTTGCTGCTGGGTTCACAAACAGATGCAGGATTGGCGGCCACAGTAGCCGCTCACTCGAGACCGTAA
TCCTCGCCAAAGTATTTGTCGACCAGCCCATTGGCCATGTTCCTCATCGCCTCGTTCTCATGGAACTGGAACCTCTCCAT
GGCCTCGATGCCATCCCCCCTCTCCACAAGCTGTGGACCCTGTCCATTGGGATACCCCCTCATCACCTGCAAAGATGGTG
GTAATTTTGATATCAATGTAACTGTAGAAACTCGGCGATACACCCAGAGT-----AACTTGAAGAGACAGTTTACTTTGA
AAATTACTAAT--GATCTGGGTTAGGAAATGAGATAGGGGCAGCTAAAAACGCGGTAAGATCCCCTCACCAGTTCCAGG
>chr3A_765
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--------------------------------------------TCCTCCTCTTCCACGGATGCCAATAGCAAAGCAACA
TGAAGGCGTTCAGAGTGCCTACAATTTCTGTTAATTCATTGGATTC-TGTACTGCCATTGCATTTTATCAGT---AGACT
GGAGCATTTTTCATGAAGAAGACTTTATTTACTTAAAAGA----------------------------------------
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--------------------AAAATCAATACGCATTATGCTATGTGACACGGAGGG-----TCACA-TAAAAAGTGGTCC
TGCTAACAACTTAACAAAACACACTGCCACAACCGAAGGTCAAATAAGAACCGATCAATGCTGCTAACGTAGTTATATCT
TCTTCCTTTTCATGAGCGTTGCCTTTTACTCTTTGCTACTCCCTCTATTCCATAATATAAAAATGTTTTTGACACTAACG
TAGTTTTTATATTATGGGACGGAGAAAGTAATTGATGACTCACCATGTATGAACATATACAGTCATGAATGGAACCGAAG
ACTCAGCTTTGGACCGAAGC--CTCCCCGCTGCTACTGTTTGGTCACAAGCACCCCGGGCCTCATG--------------
--------GGCCACGAAAAGAGGAGACGACGAGACGGCAAAAGACCCGCTGTTT---TTCTGCAGCATAAACAGAAGACT
CTCGGTGTGCAAGAGAGTTGACGACCTCCGAGACCACTTGTACTGGACAACGCCGCACGGCTGGCTGCTCATG------G
CGCACCCTGGCTCACGCCTGACATTCCTGTGGAACCCATTCACGCGCCAAAGAATCGGCCTGCCCCCTGATACAGAGAAG
TTCCTCACGAGGAACCCGGTCAGGTGCGTGCTCTCGCACGAGCCCGCGGACCCAAGCTGCGTGGTGCTTGTGGTGAACCG
CGTGGACACGGTGCTCTGGTACTGCCGCCCGGGAGC------AGCCGCCGAGTGGTCCGAGTCCGAGCACGGCTAAGTAC
TATCAAAATCGACCCAGACACCATAATCTAGTTTTTCTGTTTCCCAAAATTCTCTTGCTTCTTCACCGCTTTGTCCCAAT
TTGTAACTCCACATGTTTGTCACATAGGTGTCATCCCTCACAGCAGGCCACGCGCACTCCTGCTTGGGCACAAATGCGAG
TTCGCCGTCATGTTGAACAAGGTCAGCAGGGATGGCCTCGGGCCAATCAAAGAGCCTGGGGAGGAAGATCCTGTCCTGCA
TCCACCTGGCGCCGGTCTTCTTCATCGTCGTCGTGAGCGTGCCGGTGAACAGGACGCTCCCCTCCAGGCTCTCCACCTTC
TCCCACTCCATGGTGTGCTCGTTGAGCTTGACGACGTTGACCGGCGGCCCACGGAGGCCGACCAGGACGGCCATGAGCTC
GTCTTGGCCGGACTCGACGAGGTAGCTGTCTTCGCATTCGAACCCGAAGCTCCGGGGCTTCTCCAGGATCTCAAACCCTT
GGTCGTGCATGCGCTGGTCGTACACCGCCAGCCTCCCGTCCTGTCCCAGCAGGTAGAGCAACCCGCCGTGGAAGACCGGG
TTACAGCTCGGCGACGGCACGAACGCCGGTCCGAACTCGTACGGGGTGAAGTCCCAGTCCGTCCACCCGCCATCGCCGTT
CCTGAAGGAGAGCGCGGCCTGCAGCCGCAGAAACATGACCGCGCTGACACCGACCATCCTGCCCGCCGCGCCGTCGCCGC
CGTCGCCGACGACGAAGTCGAACCCGACTTGATCGACCGGCGGCATGTCGTGGGCGATGCCCGACCCGAGGTCGACGTTG
CGGACAAGGTGCGGCAGGGCCAGCGTGAGGCGCCGTCCGGCGGCGCCGCAGATCTTGGCACCGGGCGCGCCCAGCGTGGC
GGCGAGCTCGAAGCTCTTGTCGAAGTAGGGGCTGTAGAAGCGCGCGTTGGTGGAGCCGACGCGGGCGGCGTTGAGCAGGA
GAGGCGTGACGGACGCCGGGTAGAAGG-----GCGAGACGGCGGAGCGCCAGCGGCTGCACGCCAGGGCGAAGCCGGGGT
GGCTGGACCAGCGGAGCCGCCGCAGTATCTCGATGAGCAGGTCCGTCGGGAGAGAGGACCAGTCCCGATCTCGCGACGTC
GTCGCCTCCGTCTCGCCGTCGCTCGTGCCCATCGACATGATCGACCACGTACCGGCCGTAGCGTACGCGCACCGCCTT--
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------------ATGCGGAGTACGTTATGAAACAGATGGACGTACTATATTGATAATATCGGTCCATGTACGTAACTCTA
CTGGTACTACATTTTAATTATATGGTATATACAATATTGGAACGCGATAGGGTCCAGAACACAAACGACTCCTTAATCAT
TTTTTTATAAGCAAACCCAAAGGCACCTTCGATCGTAAGTGCGTGCGGACGACACCGGCGGCAGGCAAGCGGGGAGAGCA
ACCCAGCAAGTAGCGGCGCCTGCGATAAGCACGCCAAGGTACGCTGAGTATTATATACAGAGCAGTCCCGAGGGTGGTTG
TAAGCTAGACTCCGGCGGCCCTTGGGCCTTGGAGATAAGACGGAGCACGCCGGTAGGAGGGACGTAGTTGCGCCGACGAG
GTAGGGGTGGCGTTCCAATTTTTATTTTTATTTTTCTAGGATCTTGGCGTTCTGTAGTTGGAATAATGTTTTCTTTGTCC
TGCATTCGCTTTGACAACGTGTCTAGCTACCGCGAAGGGTGTGTGGAAGGTGTGTCATCAACGAGTTTCCTTAAATTCGC
TTGATGCTGGTTTTTGATGGATCTGTTTGGATCCAATCGACGTTTCTCTTCGACAGATTCGTATATATTCGGCCGACCCT
CGTTTTAGTTGGCGCGCTTGCAGGTGTGGTTGCTCCGATCTACGCCCATTTTTGTTGGCGAATTTTGCTGTTTTGGTGCA
AGTTTTTTTGGGGCTTAGTTGGACGACTTTTCGACTATCCACTGTAAGAAAGTTTGTGTGGTTCCGGCGTAGGAGGAGTG
ATGACGGAGGAGCACCTTCAGTTTGGTCTAGTGCTTGTAGTCATCGTTATATGGTTGTGATTTTTATCTTCTGAATTTTT
AAACGGGGGATGTTCACCCACCTGGATTTTTATACACAGAGAGCTAAAGCCCAAGTGTTTCTAGCGGTGGGAAGATGACA
TTAGGATGGAGGGGGACACACACAACGAACATATCACACGAACACAACAAGAACACACCGCTCACCCCACACCCATGCCG
GCAAGGTGTGACTCGACTAGAGCATGCAACCAAACATCCATGTGACCTCGTCATCGCATTGTCCCACAACATCGCATCCC
TANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTCTTCCACAGA
TGCCAACACGAAGGAGTTCTGAGTGACTGCAATTTCTGTTAATTCATTGTATTTTTTGTATTGCCATTGCATTTTATCAA
TAAACTGGAGCATTGACAGCTGCCAAACATCTGTGTGACCACAAGTGTCTATCGGGAGCCAGTCGTGCCACAACATCGTG
TTGTCCCGACAACAATTGAGGGTGAGGGGGAGGGAGGGTGTTCCTCCGCTTCCACAGATGCCAATAGCAAAGCAACACAA
AGGCGTTCAGAGTGGCTGCAATTTCTGTTAATTCATTGCATCTTTGTAGTGCCATTGCATCTTATCAATAGGCTGGAGCA
TTTCTCACGAAAAATACTTTGCTTTGATT---------------------------------------------------
----AAAGAAAATCAATACGCGGTATGCTATGTGACACGGAGGGTCACATAAAAAGTGGTCCTGCTAACAGCTTAACAAA
GCACACTGCCACAACCAGGTCAAAGAAGAACCGATCAATGCTGCTAACGTAGCTATATCATGTTTTCATGAGCGCTGCCT
TTTGCTCCATTATGCCCATTGACTCACCCATGTATGAACATGTAGAGCCATGAAGGGAACCGAAGACTCAGCTTTGGATC
GGAGCTTCTCCCCGCTGCTACTGTTTGGTCACAAGCACCCTAGGCCTCATGGGACCAACGCTGACGGTGAGCCCGACGAA
GATGCTGAAAACGACGAGACCGAGAAGAAGGCAGAAGATCCGCTGTTTTCTTCTACAGCATAAGCAGAAGACGCTCGGTG
TGCAAGATTGTGGATGACCTCCGAGACCACTTGTACTGGACAACGCCGCACGGCTGGCTGCTCATGGCGCACCCTGACTC
ACGCCTGACGTTCCTGTGGAACCCGTTCACGCGCCAGAGAGTCGGCCTGCCCCCTGATCGAGACAAGTTTCTGACTTTGA
ACCCGGTGAGGCGCCTGCTGTCGCACGAGCCCACGGACCCAGCCTGCGTGGTGCTGGTGGTGAACTGCGTGGACACGGTG
CTCTGGTACTGCCGCCCGGGAGGAGCCGCCGA---GTGGTCCGAGCACGGCTATTACCAGGCAGGCAGCCTGGGCACCCA
CCAT----------ATGTCATCCATGCAATGAACCTCGTGACGGCGGCGGGCGGGAAGTTCTACGCGAGCCTGCTGGGCG
CCACCGTCCTGACGCTGGAGTTCTCGCCGG---GTCCGGCCTTCGCAGAAACCCCTA---TCGCCGAGCAGCCATGTC--
-A---CCCGATGTACCGCGTCTG----GAGCCTTCACCTGCTGGAGTCACGCGGGGAGCTCTTCAGCGTCTCCCTGTACC
ACCCGTTGATGGAGCGGTGCGACAAGGTTGCCCAGATAGTCGTCCGCAGGCTCGACTTGCCGGCGAGGGCTTGGGTGGAG
GTGGACGCCGTCGGGGACCGGGCCTTCTTCTTGGTCGACGCCGTCCACTTTGGCGCGTCGCTTGGCGCGGAGGAGGCCGG
TCTCAAGGGGAACTGCGTTTACTATCTGAGGCGCGGAGAAAAGGGGCTGTATGTCTACGAC-------------------
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>chr3D_779
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----------------------------------------------------------AGATGCCAATAGCAAAGCAACA
CGAAGGCGTTCAGAGTGGCTGCAATTTCTGCTAATCCATTGTATTTTTGTACTGCCATTGCATTTTATCAAT---AGACT
GGAGCATTTATCACGAAAAAGACTTTACTTGCGAACCAACTTGTGGTTGGATGGTTAGAAGAACAGTGGTATCCTCAGCC
CACCAGGGTTCAAGACCTGGTGCTCGCATTATTCCTGGATTTATTTCAGGATTTCCGGCGATGCGCTTTTAGTGGGAGGA
GACATTTCCGTCGATGACGAGGCGCCTACGGTGACTTCGTAAATTTCAAGATAACATGCCGGCTCAGTCTCTCGGAGGTG
CTCATAGGGGTAGGGTGTGCGTGTGTGCGTTCGTATGTATGAGAGCTTGCGTTTGTACTGATGTTCAATAAAAAAGAAAA
AGTCTTTACTTTAATTAAAGAAAATCAATAGGCATTATGCTATGTGACACGGAGGG-----TCACATTAAAAAATGGTCC
TGCTAACAGCTTAACAAAACACACTGCCACAGCCAAAGATCAAATAAGAACCGATCAATGCTGCTAACGTAGTTATATCT
TG----TTTTCATGAGCGTTCCCTTTTCCTCTATTAT---GCTAAT----------------------------------
-----------------------------------TGACTCACCATGCATTAACATATACAGCCATGAAGGGAACCGAAG
ACTCAGCTTTGGATCGAAGCTTCTCCCCGCTGCTACTGTTCGGTCGCAAGCACCCTGGGCCTCACGGTACCGACGCC---
---GACGAGGCCACGAAAAGAGGAGACGACGAGACGGCAAAAGACCCGATGTTT---TTCTACAGCATAAGCAGAAGACG
CTCGGTGTGCAAGATTGTGGACGACCTCCGAGACCACTTGTACTGGACAACGCCGCACGGCTGGCTGCTCATGGCGCACG
CGCACCCTGGCTCACGCCTGACATTCCTGTGGAACCCGTTCACGCGCCGGAGAATCGACCTGCCCCCTGAC---------
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----------------------------------------------------------CGAGAGAGGTTCCTCACGAGGA
ACCCGGTCAGGTGCGCGCTCTCGCACGAGCCCACGGACCCAAGCTGCGTGGTGCTCGTCGTAAACTCCGTGGACACGGTG
CTCTGGCACTGCCGCCC---GGGAGCAGCCGA---GTGGTCCGAGCACGGCTACTACCAGGCAGGCGGCCTGGGCGTCCA
CCACGGTCGTGACGATGTCATCCATGCAATGAGCCTTGTGACGGCGGCGAGCGGGAAGTTCTACGCGAGCCTGCTGGGCG
CCACCGTCCTGACGCTGGAGTTCTCGCCGGCGGGCCCGGCCTTCACAGAAACCCCCA---TCGCCGAGCAGCCATGTCAC
CCGATCCCGATGTACCGCGTCTG----GAGCCTTCACCTGCTGGAGTCGCGCGGGGAGCTCTTCAGCGTCTCCTTGTACC
ACCCCTTGATGGAGCGGTGTGACAAGGTTGCGCAGATAGTCGTCCGCAGGCTCGACCTGCCGGCGAGGGCTTGGGTGGAG
GTGGACGCCATCGGGGATCGGGCCTTCTT---GGTCGATGCAGCCCATTTTGGCGCGTCGCTCGGCGCGGAAGGAGCTGG
TCTCAAGGGGAACTGCGTTTACTATTTGAGGCGCGGAGAAAAGGGGTTATATGTTTATGAC-------------------
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--------------------------------------------------------------------ATGGAACGTGGA
ACCACTGCCATGCACGACCCCGGTCCAGATTTGCCCGATGATGCCACGTCTGTGATATTGATGCCCGCATCTTGAAGCTT
CTGCCCTTGCTTTTTTTTTTCTCAACGTTGTTTTCTGCATCTTGAAGCTGGGATTCGTTAAATATCGATTTTGCA-AAGG
ACACACAAGTGCTTATCCCATCTAGATGATCTGTGGAACTATGCAAAGCTAGTCGCAACGGTTTTCAGCAAGAGTTTGAA
CAGCATTTCTCTAGTA----------------------------------------------------------------
-------------------------------CAA-TATATAGCTCAAAGACTCAAAATCTTCTCTTCTTACACAGGTCAC
ACTGTACTACGGTAGCTACCAAGCTCACTTCAAGCTTCCAGCTACAACAACCCCATCGACACACACATCCATGAAGATGG
CCAAGTTACACAGCAACTACGCTACCTCAGACAGTCTTGTATACATTCCACGGTTACAAAAAAGTTGCATTTTACAGTTT
GAGTACACGAGCAGCTGCTGCTGGGTTCACAAACAGATGCAGGATTGGCGGCCACAGTCGCCGCTCACTCGAGTCCGTAA
TCCTCGCCGAAGTATTTGTCGACCAGCCCATTGGCCATGTTCCTCATCGCCTCGTTCTCGTGGAACTGGAACCTCTCCAT
GGCCTCGATGCCGTCCCCCCTCTCCACAAGCTGTGGACCCTGTCCATTGGGGTATCCCCTCATGACCTGCAAAGATGGT-
--AAGTTGGGTCTAAATGTAACTTCC-AAATTCG---ATACATCCACCCACACGCAACTTGAAGAGACAGTTTACATTTG
AAAAGTACTGTAAGAACCGGGTTAGTAAATGAGATAGGAATAGTT-AAAAGGCGGTAAGATTCCCTCACCAGTTCCAGG
>chr3D_1257
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-------------------------------AGAAGGCAAAAGACCCGTTGTTTTTCTTCTACAGCATAAGCAGAAGACG
CTCGGTGTGCAAGAGAGTTGACGAGCTCCGAGACCACTTGTACTGGACAACACCTCATGGCTGGCTGCTCATG------G
CGCACCCTGACGCACATCTCACATTCCTGTGGAACCCGTTCACGCGCCAGAGAATCGGG---------------------
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----------------------------------------------CTGCCCCCTGATCGAGACAAGTTCCTGACTGGGA
ACCCGGTTAGATGCGTGCTCTCGCACGAGCCCACGGACGCAGCCTGCGTGGTGCTGGTGGTGAACTGCGTGGACACGGTG
CTCTGGTACTGCCACCC---AGGAGGAGTCGA---GTGGTCCGAGCACGC---TTACACGGCAGGCAGTC------TCGA
CCATGATCGCGCTGATGTCATTCATGGAATGGGGCTTGCGACGGCGGCGGGTGGGAAGTTCTACGCACATTTGTTGGGTA
ACATT---CTGACGCTGGAGTTGTCGCCGG---ATCCAGCCTTCACAAAAACACCCGTTGACGGTGAACCGAATCCAG--
----------TGTACCGCACCTG----GAGCGCTCACCTGTTAGAGTCATGCGGGGAGCTCTTCAGCATGTCCTTCTACC
ACCCGTTGATGGAACGCCGTGACAAGGTTGCCCTGATAGTCGTCCGCAAGCTCGACCTGTCGGCAACAAGTTGGGTGGAG
GTGGACACGATCGGGGATCGTG---TCTTCTTGGTCGATGCCAACAGGTTTGGCGCGTCGCTCGGTGCCAAAGAAGCCGG
TCTCAAGGGGAACTGCATTTATTATATGAGGCGCGGAGAAAAGGGGTTATACGTCTAC----------------------
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-------------------------------------------------------------------------------
>chr3A_1737
CGGATTTGCCCGATGACGCCACGGCTGTGATATTGATGCCCGCGGCTTGAAGCTTCCGCCCTTGCTTATTTTTCTTTTCT
CAACGTTGTTTTCTGCATCTTGAAGCCGGGACTCGTTAAATATCGGTTTTGCTCGACCTTCGTTTGTGCTGCTAATTGGC
TTGTTGCTGCACGATATTTCTCCGCTTGTGCACTTTTTCGATGTAATAACTGATCAAGCTTCCCATCTTGCAACAAAAAA
TGGAAAAAAACGAACAAACAAACAAAGCTTCCCATCGACT----------------------------------------
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-----------------GTCGCTCGTGCACGTGTCAGATTCTTATGCAGAATTACAGCGTGTCTTTTTTTTTTGCAGGAA
GAATTACAGTGTGTCAAACTGAACATGTAACTTTTTATATTTATGTTAGCCTTCATGACGATCTTCATTCACGCGGCAAG
GACATTCTCGATTTTCAGTCAACTAAGTGTCACATGTGATGACTTTTGTCGACGTTAAAATTTGCCGGCTCACACCAGGC
GTCAAGCCGGGTAAGCTATCTCAAACAAAAAAATATTGCCGGCTCACTCTCTTATAGGAGTAGAATGTGCATGTATGGAT
TCATAGGAATGAGTGCACTATTTCACTTTTTTACACATGTATGCTTATACACCGGCATGTAATTCCTTTTTTTTGAAACT
ATCTTACGGGCCCTTCAACTTGACTTGCGTTTGAGAACAGTTTGGTTCAATAAGTTGCTCGCGTTTATACTCATACACCA
ATTTTGCATCCCGGTTCTAATAATCTCATTGTGGTTTTTTAGCAAAACATGTATGATTTTTCCCCAGTAACTCCCTCGTT
CTTCTCCCTCTCGCTCTTCATCCACCAAAAATCTCTTTCGGACTCTACTAGTAGCTGTGTGGTAGCACCGGATTGTCGAT
GAATAATGGTCTCATGATCTTATGATTTGGAAAATTGCCGTGGAAGAATGTAGAGAGTGGGGCGACAGCCGACCTCGTTG
GTATTGATGATAAGAGCACCTACAACCGGACTTGACGAACCCAACCCCTCAAACGCGTGCGGACATGCCTTGGCGTGTCG
GCGGACAGTGCGGTCACGCCTCAAATTTCCCTTCTCCAACTGAACACCTCAAAAGCCCCCCTTGGCAAGGTAGCCTAGCC
CGGGTTGACGTGGTCAACAGGTAAGGCGGAAACAAGGCGCCTCGATGATACGTAAAAAAAAGGGGTGTGGGTGTGCAACA
GGAACCACTTCATAAGTTCATATGGTTCTCACTAGTGGGGTTTGATAATTCATGACAAACGATTAATGGACTAATATGTT
TACTAGGTGTATATAGGTGAAATGGTCCCTAAAGAATTTATTTAATCAAAATATGTTGACCTCTACAATTTTGAGGAAAC
ATTGAAGAATTTGATCTGCCGATTATAATTCAGAAGACACCGAGTAGAATTTATTTTCTAGTTATTTCGTTATTCGTTTG
AGTCATGAGCAAACTGCGCTGGTTGGATAGTGAAGCAAGAAGGTGAATATTCACTAATGGTCAGCCAGGCAAGAAGGTGA
ATATTCACTAATGGTCAGCCAGAATCTGTTTTTACACACACTGAAGCTTTTGAAATACCCTTCCAGATTAATCTGCTAGC
TTCAGTGGCTAGTTGAATACAGTACTTCTGAAGTATCAGCCACGGTTGAGGACTCAGGAGCATAGCTCGTCAGTGTCACT
GAAATTAGCTTCTCCATCGAGGATTTAGGGAACTCAGTTTTTGGAGTTAGCCTACTTCCTTCGTCCTTGAAAGAGTGTAT
TTCCAACTTTGTTGGAGGGTCAAACTATCTCAAAGTTTGATCGAGTTTGTGCAAAAATATGTCAATGATTGTGAAACCAA
ATAGGTATATGATGAAAATATATTTTATCATGAATCTAATATTACTAATTTGATGACATAAATGTCGGTCTGTTATTATA
TAAATACGGTGAAACATAAAAAAAATTAACTTTCCAACAAAGTTGGGAATACACTCTTTTAAGGACGAAGGGAGTAGGTT
CTTCATAGAATCGTTACCAGCGCCATCGATTTGAAATGTGGCCGCGAGGTTCTTTCCTGACTAGTTGGTTGGTCATCAAT
GGCTATTTCCTAGAGTTCAGATGCATCTGAAATCGCTATCCAACCACCGATTATAAATAACCCTCGATCCCGGGAGCGGC
GAATCGGTGCCCGAGCTCAGATGCATCTGAAATCGCTATCATAGGTTCCGCGCTTGGGATTTGAACAAATAGCGCCGACG
CATCTCACAATGGTCCATTGGGAAAGGGCGGCCCCAGAAATACGGTAGAAAACAGTGCTTCGATGGTGGGGCCGCATCTT
AGGTTGGTCATAATGGGGAGTAACTTATGCTAGTGTCATGCATATGACACTAGTCTAAATTAT-----------------
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--------------------------------------CATCTTTATAGTGTAAAGTAACATAATACTAGTGTCATAGAT
GACTTCATTTATTAGCTTATAGACTCATATTGTCCTGAAAAGCGTTATGTTACCGCTTTTCATTAACTTTTTGCCATATA
AGCAAAAAAAAATTAAAGTGCGCTATGTTACTAGCTAAGTTAGTTCCACTATGACTAGCCTTATGAGGTGGACGAAGCTA
GGGCGCGGGCGTCTGCGTGGCGCAGCGAAAACAAGTCAACAGGCGGGCGCCATGTCGAGT--------------------
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----GGTCAGGTGCGCGCTCTCGCACGAGCCCACGGACCCAAGCTGCGTGGTGCTCGTAGTAAACCGCGTCGACACGGTG
CTCTGGCACTGCCGCCC---GGGAGCAGCCGCGGCGTGGTCCGAGCACGGCCACTACCAGGCA-----------------
--------------------------------------------------------------------------------
------------------AGTTCTCGCCGG---GCCCGGCCTTCGTGGAAACCCCCCCTGTCGCCGAGCAGTCATGGCCA
TA---CCCGATGTACCGCGTATGGAGTGAGCCTTCACCTGCTGGAGTCGCGCGGGGAGCTCTTCAGCGTGTCCTTGTACC
ACCCGCTGATGGAGCGGGCTG-----------------------------------------------------------
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-------------------------------------ACTATGCAAAGCTAGTCGCAAATGTTTCCGGCAAGCGTTTTTA
CAGCATTTCTCTACTACTCCCTCCGTACTGTCGCTGAAATGAGTGTATCCACACTAAAACGCATCTAGATACACTTATTT
CATCGACAGTTAATTCTGGACGGAGGTTGTGCAA-TATATAGCTCAAAGACTCAAAATCTTTTCTTCTTATACAGGTCAC
ACTGTACTACGGTAGCTACCCAGCTCACTTCAAGCTTCCAGCTACAACAGCCCCATCGCCACACATATCCATGAAGATGG
CCAAGTTACACAGCAACTACGCTACCTCAGACAGTCTTGTATACATTCCACGGTTACAAAAAAGTTGCATTTTACAGTTT
GAGTACACGAGCAGCTGCTGCTGGGTTCACAAACAGATGCAGGATTGGTGGCCACAGCCGCCGCTCACTCGAGGCCGTAA
TCCTCGCCGAAGTATTTGTCGACCAGCCCATTGGCCATGTTCCTCATCGCCTCGTTCTCGTGGAACTGGAACCTCTCCAT
GGCCTCGATGCCGTCCCCCCTCTCCACAAGCTGGGGACCCTGTCCATTGGGATACCCCCTCATCACCTGCAAAGATGGTG
GTAATTTTGATATCAATGTAACTGTAGAAACTCG---ATACACCCAAAGT-----AAATTGAAGAGACAGTTTACTTTGA
AAATTACTAAT--GATCCGGGTTAGGAAATGAGATGGGAATAGCTAAAAACGCGGTAAGATTCCCTCACCAGTTCCAGG
>chr2A_2084
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-------------------------------------------------------------CAATAATCCTACATCTACG
TAATGATCTACTTAACCTTACGTAACCTTCTTTAATCAAATTCTCTCTCGCCCCCCTGATTTCGCGGGGTGGGGCCCGGG
TCGTTCTTCATCCAATCNNNNNNNNNNCCCTGAGGCGTGGCCTGGCCTGGCGGAGGCGGAGAGGAGGCTTTCAAGGTGCG
CCGTGGTCGCTGTGGTGGTCGGCTCTCCACTCCCGTTCGAGCTCGTCGACGTCAAGAGGGCGCTCGCTCTGCGGTTCCGC
ATCAGCGAGGCGGCGGTCAAGGTCTCACTGAGGGCCTTGGGAGAGCTCTTGCTTGTCTTTGATGATGCGGCAGTCCGGGA
CAAGGTGGTTGGCGGCCGGGGATCGCTGGTGCTCGGGCGTGTCACATTCATGGTGGCGCCGTGGTCGCGATTCCGGCGTG
CCTCCCCGGCAAAGCTGCTTTACAAGGTGTGAGTCTGTCTGGAGGGTGTGCCGGAACATGCGTGGGACGTGGACTCCGTG
ACGCCGCTGTTTGATCCCTTTATGCTCATCGACGGGATTGATGACGAGGTGCGGAGTGAAGAGGAGACCGGATGCCTGCG
CCTCTGGGTGTGGATGGACTCAGTGGAGAAGCTGAAGACAAGGGGGATCCTGCAGCTGGAGGAGCCACGGGAGGCGGGGT
CACCCGGCGCGCACTACCCGGAGCTCAATATCATGGAAGAAGCAGCGCCAAGGTGGGGAAAGGTTGGCATGCTAGGCCAC
CCTGTTCTCATCCACCTCGATCACGTGGTGGACTTCTCCTGTCCGCCGGCCTCTAGCCCGGACAGCGGGATGAGTATCGA
CAGCGGGATCAGCGGGCTGCCGTCGGACGACGGGACGGTGCCGGAGTGGCCGGGCAGATGGGGATACCGATGGTTCCTTA
GCTACGAGGATGGAGATTTCCTGCCGCCACCCCCGCGGCAACCGGCTCGCTCTCGCTTGAGGTTCCCTGACGCGGGCGGC
GATGGTGGTGGCGGGCGAAGGAGGACATACGGCTCTAGGGAAGGCTTTCTTCAAGCTAGCACGGGCTTGAGGCATGCTGG
GGCAGATCGACAGCACCAGGAGGGAAGAAGTCGGGGGGCTGGCCATGACGGCGGTGGTCGGAGGCATTCCGGCCGTCCGG
CGGGAGGTGACCCGCCGCTCATTGATACGGCTGCGGTGGACGTGGGCTTGCCAGGGGTGGACCCATTCTTCAGGTCTGTT
GACGCCCCCATGCTCTTTGATCAGCGGCATGGCGATGCGGAAAACGCAGACCAGGAAGGGAAGGGAGCGGGTAACAGGAG
GAGATGGTGGCAGACGAGGATAGCCCTGCCCGTGAAAGTCTGACCTCCCTGTGCGTAGCTGCGCCGAGCCGGCTGCATGA
GCTGGGGCAGCAACATAATGGAGAGACAGGGCAAGAAGAGGAAGGAGGGAGGACGAGCATCGGGGAAGCGGGCGACGTGC
ATGGCCATTTGCATGCAAGTGTGCCCATTGGCGTTGCCGATCTGCCACCGATGGACCAGAGGGCGGAGCGCGTGGGGGCC
CCCACCAAAAATGCTAGACCTACGTAACCGGGTACGTAAAGCTACATTCCTTCCTTCCAACTCAACTAAACATCCCTCCT
GAGTTTCACGGGTGGGCCTGGGCCAATTTTCCCTTCCAACCAAAACAGGCCAGGTCAGCTTTTACGTAGGTTACGTACAA
ATCCTTACGTAGGTGTAGCAAAGCTCGGCCCCCACGCACAATAATCCTACATCTACGTAATGATCTACTTAACCTTACGT
AACCTTCTTTAATCAAATTCTCTCTCGCCCCCCTGATTTCGCGGGGTGGGGCCCGGGTCGTTCTTCATCCAATCGTGTCT
TGCCAGACCAGCTTTCACGTAAGATTACGTTTGCCTTTTACGTAGATGTAGCAAAGCCC---------------------
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-------------------------------------------------------------------------------
>SNPs
SSSSS---S-SSS-SSS-SSSSSS-S---SS-S-SS-SSSSSS-----SSSSSSSSSSSSS--SSSSSSS--S-S-SSSS
SS-S-SSSSS-SS--S-SSSSS-SSSSSS-SS-SS-SS-S-SSSS--SS-SS---SSSSSS-SS--S-S--S-S--SSSS
SSS--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S-----------------------------
-------S------------------S------------------------S-----------------S-SSSS-----
--------------------------SS----------------------------------------------------
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------------------------S---------------S--S------------SSSSS-------------------
-----------------------SS-S-----------------------S-S-S-----------------S-------
-S----S----------S---------S---------SS-----------------------------------------
------------------------------------------S---------S---------------------------
-----------------------------------S----------S---------S--------------S----SSSS
SSS-----------------------------------------------------------------------S-----
---------------------------S---------------------------SS-----------------------
----------------------S---------------------------------------------------------
----------------------------S-S--------------S--------SS------------S-----------
--SS--------------------------------SSSSSS-------------------SS--SSS--SS-S-S----
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-----------------------------------------------------SSS---SS-SS-S-------S-SS---
S-S--SSS-SSSSSS-SS---------------------------------------------------------S-S--
-SSS--------SS--S--SSS----SSSSSS-----S-S--S-S------S--SSSSS----S--S-SSSSSS------
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--------------------------S-----------------------------------------------------
--------------------S-----------------------------------------------------------
-------------------------------------S---------------S--------------------------
------------------------------------------------------------S-------------------
---------------------------------------S----------------------------------------
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-----------------------------------------------------------SSSSSSSSS-----S------
--S-----------------S-----S---------------------S--S----------------SS----------
--------------------S-S-S---------------------S-S----S---------------------S----
-----------------------------S------------------------S-------------------------
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----------------------------------S----------------S--------------------S-------
-----------------------------------S--------------------------------S-----------
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--------------S-------------------------------------------S--------------S------
--------S--------------------------------------------------S--------------------
------------S-------------------------------------------------------------------
----------------------------------SSS---------S---------------------------------
-----------------S--------------------SSS--------------------S-----------------
>forward_753
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-------------GGTATAGCGACACCCGTGAG-----------------------------------------------
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>reverse_10063
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--------------------------------------------------------------TACGACATGGAGCGTGGA
AC------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
