>input_sequence_59515
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-----------------------ACCTCGCGCATCATCAGCGGCATAAATACCTCTCCGAAGCTTGGGATCGTGTGTAGA
GTGCGCACG----CACAGGGTGATAGCTAGCCACG----CCGCGGAAATGGGAAGGCCGGAGCACGACGGGGCTGCGTCG
CCGTTCGGGTTCGGCACGTCCCCGCCTCTCTCCGGCGCGTCGTCCCCATCGCCGCTGCTGCCGGCACCCAACCACGGCAC
GACGAGGTTCGGAGGAAGGAGGAGGAACGCCGTCGTCAGGCTGATCTGCTCGCCCTTCGCCGCCGTCTTCGGGACCGCGT
GCTCCGCCGGTGCAGCTGCACACGACGTCGACCGGGCGACGAGAAGGCCGAGCCTCGAGGAGCTTCTCAGGATGGAAGCG
TCGTCGTCGGATCTCCTCGACGTCAAGCAACCCAAGGAGCCTGCCGAGATGGTCGACACGTACGACGACGACGACGACGA
AGACTCCTGGAAGCAGAGCGCCATCGTGGTGTTCGATCTAGGCAAGGACGGCGACAAGAGCCGCCCGATCATCGATGACG
AGAAGATCGACGCGCCACTGGCCGTCTCAGAAGATCCGCACGGCGCCATTACCTGCCCCGGCGACGAGAAGGAGCCCGAG
GAGGAGCTCGACGCCGGCGGTGGCGGCGGCGCCATGCTGTCCCCGAAGGCGCTGGTGAACGTGGAGAGGCTGGTGGTCGT
CCTGGCGTCGCTGGGGGCGCGCTCCAGGGCCCTGAAGGGCTCGTACGGCAGGCTGGCAGCCGGTCGCCGTGTCG------
---ATGATGGCAAGGCGGAGCTGTTCTACGACCGGCCGATCCCGCTGGGGCGGAGGTGCCGGGTGCAGCACCTGGAGGAG
TCCCCTTACCTGTGAATGTGACTGCTTCGTTGAGGTGGCAGCGGTGGTGCTTTCGCTG--------TCGAGTTGTGTGTA
TGTGGAAGTGGAATTGTGGATGACCTACTTAAACAAACTTGGGTTGGAAAGGAGAAAGATGATGATGTTCACTGTCAGGT
ACGTTGAGGCCGGGAAATGCTACACTTACGGACTGTTTTGGCACCGAAGGAGTTACGGACTGAAGTGTAAATCTATGATT
GGTTAGTGATGGAGCCCACAACAAAATTCAAGGGAGGTGACTGGTGAGATTAATAAGGAGCAGACACGTTA---------
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>chr7D_1_TraesCS7D01G101400
AAAACCTAACATAAATTACTAACCGGAGCGGAGACACTGAGATTCTCCTCCTCACCAAGTCGCTAGTCAGTTTTCACTTA
ACCATGAACTTCAACTTGCTGTTCAAACAACGAGAAACGCAGGTCTGGACGCAGCGGCAGCTGCACGCGCGGCATCAACG
GCGCGAGGACCATCACGATTCGCACCAAGCTGACATGCTTCC-------TAGAGTATAGTCGTGCGGTGGATGCCGTTT-
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----------------------------------TGCCGGCTAATCTGCAAAAATCGGTCCGCAAAACAACC----CATA
AGGAGGCGACGGGACCATGGAGGAAGGGGGGATAGCACAGACCAGCGTGGGCAACCGGCAAGAACATT-----GCCGCAG
AGTTTTACTAACCGGTCACCCAACGCCGGTGTCGTCGCCCCGGGAATCGCCATGAGTAGATTCAGACGGAACTTGAGCGC
CTTCCTTTTCGGTTCTTGGTCTGTCGAGTGTGAGAGGTGGGTCGCAAGCACACGCAACCAAGCCTACGTCGTCCAGGACA
CTCTACCCAAAAACGGGAGCCAGGTCCCACGTGGTAAAAAATGTCAATGCCG-CTGCATGGCTGGCCC---TTTGCGTCT
GATGCGTAC-CGCGCCGTACGAGCCACAGAGCACACGTGGCCACGGTATCGAGGTGTATATGGCGATGTATACATT----
-CGTTGTGACTTTTCCACTTATTCCATGCGCGCATCACCTGGACGCAGCGGGCGGCTGGATATCTGTGTCCAGATGCCGC
TGCGTCCAGGACGGCCGCACTCTTCAAACAACGGCATAAATCGACCGATGCATCGACAACATTTTCCCCTTGCACAGTCC
CACACGTTT--CCCATCCATCCTTTGCCCCCTCCCCCAAAACTCTGCAACATTTCGGAACCTCCCGGACCAAACACTCGT
CCTAAGTTCCTAACCACGGTAGCTGAACAAACGAGTGCTACTACGCTTGCAGATCACACCGCGGAAGCCTATCTACTCGG
AACAAACTCCACAGTCCACACCCACCTCGCGCATCATCAGCGGCATAAATACCTCTCCGAAGCTTGGGATCGTGTGTAGA
GTGCGCACG----CACAGGGTGATAGCTAGCCACG----CCGCGGAAATGGGAAGGCCGGAGCACGACGGGGCTGCGTCG
CCGTTCGGGTTCGGCACGTCCCCGCCTCTCTCCGGCGCGTCGTCCCCATCGCCGCTGCTGCCGGCACCCAACCACGGCAC
GACGAGGTTCGGAGGAAGGAGGAGGAACGCCGTCGTCAGGCTGATCTGCTCGCCCTTCGCCGCCGTCTTCGGGACCGCGT
GCTCCGCCGGTGCAGCTGCACACGACGTCGACCGGGCGACGAGAAGGCCGAGCCTCGAGGAGCTTCTCAGGATGGAAGCG
TCGTCGTCGGATCTCCTCGACGTCAAGCAACCCAAGGAGCCTGCCGAGATGGTCGACACGTACGACGACGACGACGACGA
AGACTCCTGGAAGCAGAGCGCCATCGTGGTGTTCGATCTAGGCAAGGACGGCGACAAGAGCCGCCCGATCATCGATGACG
AGAAGATCGACGCGCCACTGGCCGTCTCAGAAGATCCGCACGGCGCCATTACCTGCCCCGGCGACGAGAAGGAGCCCGAG
GAGGAGCTCGACGCCGGCGGTGGCGGCGGCGCCATGCTGTCCCCGAAGGCGCTGGTGAACGTGGAGAGGCTGGTGGTCGT
CCTGGCGTCGCTGGGGGCGCGCTCCAGGGCCCTGAAGGGCTCGTACGGCAGGCTGGCAGCCGGTCGCCGTGTCG------
---ATGATGGCAAGGCGGAGCTGTTCTACGACCGGCCGATCCCGCTGGGGCGGAGGTGCCGGGTGCAGCACCTGGAGGAG
TCCCCTTACCTGTGAATGTGACTGCTTCGTTGAGGTGGCAGCGGTGGTGCTTTCGCTG--------TCGAGTTGTGTGTA
TGTGGAAGTGGAATTGTGGATGACCTACTTAAACAAACTTGGGTTGGAAAGGAGAAAGATGATGATGTTCACTGTCAGGT
ACGTTGAGGCCGGGAAATGCTACACTTACGGACTGTTTTGGCACCGAAGGAGTTACGGACTGAAGTGTAAATCTATGATT
GGTTAGTGATGGAGCCCACAACAAAATTCAAGGGAGGTGACTGGTGAGATTAATAAGGAGCAGACACGTTAGCCCGTAAC
CTCCATCCCGTGGCCTATGCCCCGTAAGTGTAGGATTATTGGTTGAGGCCCCGCTTAGTCGGCCATTCTGGCCCCGATTA
CCGACGTAAAAAGCGGCCTCGAATATTTGAAATCAGGAGATAAAGAAAATTTGCACGGATCCTCATCGACTGAGGACATG
AACTATGGGAGCATCACCCCGGTGTGGTTTCAGCCTCCACCTAAGAAAAAAGTTAATGAGGCCACTGAATGAACATCTCA
CACGGTCACACCCATCAGAAGTAGCAGCTCTTCTAGTGGTCCGCCTATCTTTCTCCGTCACTACTTTTTACTCCATGGCT
CGTTCATCCATTTGTTTGAGCATGTCCAACAGGCGCCGAACGCGCCGCGCGCAAAAA-CTGCTTTGCCGCGCGTCCATCG
TTTGGTTTGGCGCG-------GCGCTGGCTCCAGCAGCCACGCTAAAATGCAGCG----CGCGCGCCGCTCCAGCAGCGC
GCAAAAAATGCAGCGCGCGTAACT-CACCGGGGCATTGCATATATGGCATTTTAAACACAAAATGAAGTTGAAACATTCA
AAATGCAATGAACATGACATAT--AAAATTTCACACAAACAAGTTGATGAAGAAAA------------------------
----------G--------------------TTCATCCAACCAAGTTCGAAATGCAAATCAAGTTCAATACACAAATGA-
-AAGACACATCATTCCTCGTCCTC------------GTCCTCATCTTCGGAAGACGATTCTTCCGCCTCCGAAGATGAAT
TTTCCTCCCTCTCCTCATCGCGCACCGCATCACGTGAACCTCCGACGGTGTTGGCAAGATCTTCAACGGCATCTTCATGG
GAATGTGTGCGAGGAGGCACATCGAAAGACATTCCGCCCATGACGGCCGGAGGTGCACCCATTCCTCAT-----------
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-----------------------------GCCTTGTTTTTCTTCGCCGATGTCTTGCCCTTCTTTGGCCGCGCCGCATTG
GGGAGCTTTGAGGAGGGGGCGGCGGCTCGGGCCGGCGCCAGTGCGACGCCACCCGCCGCCGAGGTCATCCGCGG
>chr3D_111
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------------------------------CGAGAAACGCAGGTCTGCACGCAGCGGCAGCTGCACGCGCGGCATCAACG
GTGCGAGGACCGTCGCGATTCGCACCAAGCTGGAATGCTTCCTAGAGTATAGAGTATAGTCGTGCGGTCGATGCCGTTTT
GCAACGTA------------------------------------------------------------------------
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--------------AAGCGATTCTTTTGCCGATAATGACACCCCAACTTGGAGAAGGCCAGTAGTTCGCAGCTAGTTCAA
TTATTGGATGAAAAACTCCATCCGTAACACTCCCA---------------------------------------------
------------------------------------------------TACAGCCTGGTGAGCTCAAACTACCATGGAAA
TACAAACGTAATTTGCA-AA-AAACAAATGGCTTTTATTAATGAGCCAGAACATAAGTCTTTCGAATCCCAATCGAAAGC
AAATAGACCAGTGCAAATAC-A-GCCTTCAGGATCAAATAGAGATACAAAGACACAACACAGATGACTAGAACCGGAGAT
ACAG-------AACCACAGAACCGGGTTGGGGCAAC---TTTTCTTGTGCCCAGCGACGCCACCGTTGCAGGTAGCCGCA
GCGCCCAGCGAGCTGCCGGGGCTGTCGTGGCTCAGTGCGGGCGCGCCCAACGAATGTGCGCCAGCCCCTGCATCCGCCGA
TGGCCAACCGCCACCGCCAGAGCTCAATGTCGTGCAGGACGCACCCGATGATTGCACATCTGGCGTGTTGCTGATCTGCC
GCTGCCCAGGCGGCCGGGGCGCTAGCTGCGCCCCCAATACCTGCGCTTTGGGGACCGGCGGATCTGGAGC----------
--------------------------GCTCCCCGTGCCGGCCAATCTGCAAAAATCGGTCCGCAAAACAACCAAACCATA
AGGGGGGGACAGGACCATGGAGGTC-GGGGGATAGCACAGACAAGCGCGGGCAACCGGCAAGAACAAAATAGAGCCGCAG
AGTTTTACAAACCCGTCGCCCAATGCCGGCGTCGTAG-CCCGGGAATCGCCATGAGCAAATTCAGACGGAACTCGAGCAC
CTCCCTTTTCGGTTCTTGGTCTGTCGAGTGCGAGAGGTGGGTCGCAGGCACAAGTAACCAAACCTGCGTCGTCCAGGACA
CTCTACCCAGAAAGGC-AGCCGGGTCCAATGTAGTAAAAA-TGTCACCACGTCCTGCAAGGCTAGCCC---TTTGTGTCA
GATGCGTACGCGCACCGTGCGAGCCACAGAGCACACGTGGCCACGGTATTGAAGTGTATATAGCAATGTATGCATCCGTT
CCGTTGTGACTTTTCCCCTTATTCCATGCGCGCATCACCTCGGCGCAGCGGGCGGCTGGATTTCTGCGTTCAG-------
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>chr3B_111
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------------------------------CGAGAAGTGCAGCGCTGCACGCAGCGGCAGCTGCACGCGCGGCATCAACG
GCGTGAGGACCATCGCGATTCGCACCAAGCTGGCATGCTTCCTA-------GAGTATAGTCGTGCGGCAGATGCTGTTTT
GCAACGTATATGCGTATTTAGGAAGGGACCGGACTGACAGTACTTACTGACACACTGTTCTGCGCAGCATGGCCATGGTA
CGTGCGGAGCACAGCCATCGTCAGTTGCATCCCCATGTCCAGCGGTTAATAAATTTCACAGCCCTTCACAAAAAATAAAA
AAATCACTGCCACAAAGCGATTCTTGTGCTGATAATGACACCACGACTTG------------------------------
------GATGAAAAACTCCACCCGTAACACTCCCA---------------------------------------------
------------------------------------------------TCCAGTCTGGTAAGCTCAAACTACCAAGGAAA
TACAAACATAATTCGCAGAA-AAAAAATTGGCTTTTGTTAATGAACCAGAACATAAGTTTTTCGAATCCCAATCGAAAGC
AAATAGACCAGTGCAAATACAAGGCCTTCAGGATCAAATAGGGATACAAAGACACAAGACAGATGACTAAAACCGGAGAT
ACAGAAGACAGAACCACAGAACCAGGTTAAAGCGACTTGTTTTCTTGCGCCTAGCGACACCACCGTTGCAGGTAGCCGCG
GCGCCCAGTGAGCTGCCGGGACCGTTGTGGCTCAGCGCCGGCACGCCCCACGAATGTGCGCCAGCCCCTGCGTCCGCCGA
TGGCCAAGCGTCGCCGCCAGAGCTCAATGGCGTGCAGGACGCCGCCGATGACTCCACATCTGGCGCCAG-----------
--------------------------TGTGCCCCCAACACCTGCGCTTCAGGGACCGGCGGCTCGACGCCGCACCCCGCG
CGTGCACCCCCGACCACATCTGGAGTGCTCCCCGTGCCGGCCGATCTGCAAAAATCGGTCCGCAAAA-------------
----GGCGACGGGGCCATGGAGGAA-GGGAGATAGCACAGACCAGCGCGGTCAACCGGCAAGAACA-----GAGCCGCAG
AGTTTTACTAACCTATCGCCCAACGCCGGCGTCGTCGCCCCGGGAATCGCCATGAGTAGATTCAGATGGAACTCGAGCGC
CCC--------GTTCTTGGTCTGTCGAGTGCGAGAGGTGGGTCCAGGACAG-----------------------------
---TGCCCGAAAAGGGGAGCCGGGTCCCATGTGGTAAAAAATGTCACCGCGCTCTGCACGGCTGGTCCTTTTTTGCGTCA
GATGCGTAC-CGCACCGTGCGAGCCACAGAGCACACGTGGCCACGGTATTGGCGTGTATATGGTGATGTATGCATT----
-CGTCCTGACTTTTCCACTTATTCCATGCACGCATCACCTCGACGCAGCGGGTGGGTGGATATCTGCGTCCAGATG----
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>chr5B_125
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--------------------------------------------CTGCACGCAGCGGCAGCTGCACGCGCGGCATCAACG
GCGTGAGGACCATCACGATTCGCACCAAGCTGGCATGCTTCCTA-------GAGTATAGTCATGCGGCGGATGCTGTTTT
GCAACGTATATGCGTATTTAGGAAGGGACCGGACTGACAGTACTTACTGACACACTGTTCTGCGCAGCATGGCCATGGTA
CGTGCGGAGCACAGCCATCGTCAGTTGCATCCCCATGTCCAGCGGTTAATAAATTTCACAGCCCTTCACAAAAAATAAAA
AAATCACTGCCACAAAGCGATTCTTGTGCTGATAATGACACCATAACTTG------------------------------
------GATGAAAAAATCCACCCGTAACATGTATGCATGACTCTAGATTAGCTGAACATGCATACATAGTGAGACAACGA
AATTCTAAGGCACTATGTATGCATGACACCACGACTTGGATGAAAAACTCCAGTCTGGTAAGCTCAAACTACCAAGGAAA
TACAAACATAATTCGTAGAAGAAAAAATTGGCTTTTGTTAATGAACCAGAACATAAGTCTTTCGAATCCCAATCAAAAGC
AAATAGACCAGTGCAAATAC-AGGCCTTCAGGATCAAATAGGGATACAAAGACACAAGACAGATGACTAAAACCGGAGAT
ACAGAAGACAGAACCACAGAACCAGGTTAAAGCGACTTGTTTTCTTGCGCCTAGCGACACCACCGTTGCAGGTAGCCGCG
GCGCCCAGCGAGCTGCCGGGACCGTTGTGGCTCAGCGCCGGCACGCCCCACGAATGTGCGCCAGCCCCTGCGTCCGCCGA
TGGCCAAGCGCCGCCGCCAGAGCTCAATGGCGTGCAGGATGCCGCCGATGACTCCACATCTGGCGCCAG-----------
--------------------------TGTGCCCCCAACACCTGCGCTTCAGGGACCGGCGGCTCGACGCCGCACCCCGCG
CGTGCACCCCTGACCACATCTGGAGTGCTCCCCGTGCCGGCCAATCTGCAAAAATCGGTCCGCAAAA-------------
----GGCGACGGGGCCATGGAGGAA-GGGAGATAGCACAGACCAGCGCAGTCAACCGGCAAGAACA-----GAGCCGCAG
AGTTTTACTAACCTATCACCCAACGCCGGCGTCGTCGCCCCGGGAATCGCCATGAGTAGATTCAGATGGAACTCGAGCGC
CTC--------GTTCTTGGTCTGTCGAGTGCGAGAGGTGGGTCGCAGGCACACGCAACCAAGCCTGCGTGGTCCAGGACA
CTCTGCCCGAAAAGGGGATCCGGGTCCCATGTGGTAAAAAATGTCACCGCGCTCTGCACGGCTGGTCCTTTTTTGCGTCA
GATGCGTAC-CGCATCGTGCGAGCCACAGAGCACACGTGGCCACAGTATTGGCGTGTATATGGTGATGTATGCATT----
-CGTCCTGACTTTTCCACTTATTCCATGCATGCATCACCTCGACGCAGAGGGTGGGTGGATATCTGCGTCCAGATGCCGC
TACGTCCAGGACGGCTGCACTC----------------------------------------------------------
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>chr7A_801
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-------------------------------------------------------------TTTTTCCCTCGCACAGTCC
CACACGATTTCCCCATCCATCCTTTGCCCCTTCCCC-AAAACTCTGCCACATTTCGAAACCTCCCAGACCAAACACTCA-
-------TCCTAACCACGGTAGCTGAACAAACGAGTGCTACTACACTTGGAGAGCTCACCCCGAAAGCCTATCTACTCGG
AACAAAC-------TCCACACCCACCTCACGCATCATCAGCGGCATAAATACCTCTCCGAAGCTTGGGATCGTGTGAAGA
GTGCGCACGTACGCACAGGGTGATAGCAAGCCACGTACGCCGCGGAAATGGGAAGGCCGGAGCACGATGGGGCTGCGTCG
CCGTTCGGGTTCGGCCCGTCCCCGCCTCTCTCCGGCGCGTCGTCCCCTTCGCCGCTGCTACCGGCACCCAACCACGCCAA
GGCGAGGTTTGCGGGAAGGAGGAGGCACGCCGTCGTCAGGCTCATCTGCTCCCCCTTCGCCGCCGTCTTCGGAACCGCGT
GCTCCGCCGGCGCAGCTGCGAACGACGTCGACCGGGCGACGAGAAGGCCGAGCCTCGAGGAGCTCCTGCGGATGGAAGCG
TCGTCGTCCGATCTCCTCGACGTCAAGCAGCCCAACGAACCTGCCGAGATGGTCGACCCGTACGACGACGACGACGACGG
---CTCCTGGAAGAAGAGCGCCATCGTGGTGTTCGATCTAAGCGAAGGCGGCGACAAGAACCGCCG---CATCGAGGACG
AGAATGACGAGGCGCCGCTGGCCGTCTCAGAAGACCAGCACGGCGCCATGACCTGCCCCGGCGACGTGAAGGAGCCCGCG
GAGGAGCTCGACGCCGGCGG---------CGCCATGATGTCGCCGAAGGCGCTGGTGAACGTGGGGAGGCTGGTGGTCGT
CCTCGCGTCGCTGGGGGCGCGCTCCAGGGCGCTGAAGGGCTCGTACGGCAGGCTGGCAGCCGGTCGCCGTGTCGGCGGTG
CCAATGATGGCAAGGCGGAGCTGTTCTACGACCGGCCGATCCCGCTGGGGCGGAGGTGCCGGGTGCAGCACCTGGAGGAG
TCCCCTTACCTGTGAATGTGATTGCTTCGTTGAGGTGGCAGCGTTGGTGCTTTCACTGTCGAGTACTCGAGTTGTGTGTA
TGTGGAAGTGGAATTGTGGATGACCTACTTAAACGAACTTGGGTTGGAAAGGAGAAAGATGATG---TTCACTGTCAGGT
AGGTTGAG------------------------------------------------------------------------
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>chr7D_2481
CATTCAT-------------------------------------------------------------------------
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--------------TTAGAGCATTTCCAAGAGGCGCCGAACGCGCGCA----AAAAA-CTGCTTTGTCGCGCGTCTATCG
TCTGGTTTGACGCGGCGCGCAACGTTGGCTCCAGCAGCCGCGCTAAAATGCAGT------GCGCGCCGCTCCAGCAGCGC
GCAAAAAATGCAGCGCGCATGACTCCACCGGGGCATTGCATATATGGCATTTTGAACACAAAATGAAGTTGAAACATTCA
AAATGCAATGAACATGACATAT--AAAATTTCACACAAACAAGTTGATGAAGAAAAGTTCATGCCCAC------------
--------AAG--------------------TTCATCCAACCAAGTTCAAAATGCAAATCAAGTTCAATACACAAATGA-
-AAGACACATCATTCCTCGTCCTT------------GTCCTCATCTTCGGAAGACGATTCTTCCGCCTCCGAAGATGAAT
CTTCCTCCCTCTCCTCATCGCGCACCGCATCACGTGAAGCTCCGACGGTGTTGGCAAGATTTTCAACGGCATCTTCATGG
GAATGTGTGTGAGGAGGCACATCGAAAGACATTCCGCCCATGGCGGCCGGAGGTGCACCCATGCCTC-------------
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>chr5D_2484
TTGTA---------------------------------------------------------------------------
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----------------AGAGCATCTCCAACAGGCGCCGAACGCGCCGCGCGCAAAAAACTGCTTTGCCGCGCGCCCATCG
CCTGGTTTGGCTCGGCGCGCAGCGCTGGCTCCAGCAGCCGCGCTAAAATGCAGCG----CGCGCGCCGCTCCAGCAGCGC
GCAAAAAATGCAGCGCGCGTGACA-CACCGGGGCATTGCATATATGGCATTTTGAACACAAAATGAAGTTGAAACATTCA
AAATGCAATGAACATAACATAT--AAAATTACACACAAACAAGTTGATGAAGAAAAGTTCATGCCCAC------------
--------AAGTTCAAAATCATGCCCACAAGTTCATCCAACCAAGTTCAAAATGCAAATCAAGTTCAATACCCAAATGA-
-AAGACACATCATTCCTCGTCCTCGTCTTCGTCCTCGTCCTCATCTTCGGAAGACGATTCTTCCGCCTCCGAAGATGAAT
CTTCCTCCCTCTCCTCATCGCGCACCGCATCACGTGAAGCTCCGACGGTGTTGGCAAGATCTTCAATGGAATCTTCATGG
GAATGTGTGCGAGGAGGCACATCGAAAGACATTCCGCCCATGGCGGCCGGAGGTGCACTCATGCCTCCCATGAGAGAAGC
AAAACTCATGCATCCCATGGTGGCCATAGCGTCGGGGGGTGCTCCAGAGCCAGCAATGCCTCCCATTGCACCGCCCACGG
TAGCTCCGAAGCCACCCATGCCACCCATGGCGCCGAGGCCACCGCCACCCATGGCGCCGAGGCCACCGCCACCCATTGCA
CGAACCATGGCTCTTTTTTGGATCAAGACTTCTTCACGGGCAAGATTGACATACTCCTTTTGCGCCGCATTGAGGTTAGA
TGTGTTCAAGAAGAACAAGTGCTTCTCCCATTCCAACAATCTAGTTCGCTCCTCATTGCTCACCTTCCTCTCCTCCAAAG
CCACCTTCCTCTCCTCGGCCGCCACCCTCCTCTCCTCGGCCGCCAACCTCCTCTCCTCGGCCGCGGCATCTTGGTTCCTT
GCCATTTTTCTCACCTCGTTGGCTTCTTTTCTTGCCTTCACAATAGCTTCCATAGCATTTTTGAGCTCATCATCTCCTTT
CCTCTTCTTCTTTTCGGTTT-GTCTTTCTTGCACCCATTCGGTCGCTTTGGCTTCGAGTATGAAACCGAGTTGGGTGTGG
GGCTTCTCTTGCCGTCATCACTTGATGCATCATCCTCATCATCATCATCATCCAACTTAATTGTTCGCTTGCGTTTGTTG
CTCAAATGCAAATCATCCAAATCTTCACGCTTCTTCCATTTCTCATCATCCTTCAACACGTTATAGCAATGGGGCAAGGT
AAAGACCCTTCCTTTCTTGATCTTCCCCTTCTTGGTTGTCCTCTCCTCTTCTTTGAACAAGTTTTGCGCAATGTTGTACT
ACATGAAAACAAAGCAAGTTAGCACCAACAACAAGTAT--------------------------GATGAACATGTATGAA
ATGCCACTTACTCTATCGTCCTCATTTGTGCCACTTGGGTTCAACTTGTCAACCGCCTTTTGACAGGCCGCCCACCTTTG
ACAATCCGAGTTGATTGTCGACCATCGGGACCGAAGTGATCTCTCGGAGCGGTCAGTTCCACTCAAGTTGTGAACATCAA
AGTGTTCTTTCATCCGCCCCCAATAAGCATCTCTAC-TTGATCACCTCCAACGGATGGATCCCTCGACACTTGCAACCAA
GTATTGCATAGTAAGATGTCATCGACGTTGGTGTAATTGCCCGCTCTTCCTTTCGGTGCGTCGACAATGCCCTCACCCTC
CTCGTCCACCTCGAACTCATGGTCTTCGAAGTGCATGTCATTGATTTGAGACCAATGCGAATTGTTGGAGCCAACACCCA
TCGTTGACATGTATGCATCATCATTGAGACTACAAAG---TTTTTTGAACAATGCAAATATGCTATCTATATGTGAATGC
ATTGAAAAAATAACAAAAAAAATGAAAAGTTGGAA-TTTTTTTACCTTGGGGGCATTTCGTCGAAGATGTTGTGCGCGTC
GGCCGCCGGCTCAACGAGTGAGCTCGCCGGCGCTTAGGTAGCCGCCGCGCCCGTCGCACGCCCTGCAAGCTTCTTCCTCC
TCGCCTTCGAGGTGCCGGAGCCATCCGCCGCCTTGTTTTTCTTCGCCGATGTCTTGCCCTTCTTTGGCCGAGCCGCATTG
GGGAGCTTTGAGGAGGGGGCGGCGGCTCGGGCCGGCGCCGGCGCGACGCCACCCGCCGCCGAGGTCATCCGCGG
>chr2D_2486
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-------------GTTAGAGCATCTCCGACAGGCGCCGAACGCGCCGCGCGCAAAAAACTGCTTTGCCGCGCGCCCATCG
CCTGGTTTGACGCGGCGCGCAGCGCTGGCTCCAGCAGCCGCGCTAAAATGCAGCG----CGCGCGCCGCTCCAGCAGCGC
GTAAAAAATGCAGCGCGCGTGACT-CACCGGGGCATTGCATATATGGCATTTTGAACACAAAATGAAGTTGAAACATTCA
AAATGCAATGAACATGACATAT--AAAATTTCACACAAACAAGTTGATGAAGAAAAGTTCATGCCCAC------------
--------AAG--------------------TTCATCCAACCAAGTTCAAAATGCAAATCAAGTTCAATACACAAATAA-
-AAGACACATCATTCCTCGTCCTCGTCTTCGTCCTCGTCCTCATCTTCGGAAGACGATTCTTCCGCCTCCGAAGATGAAT
CTTCCTCCCTCTCCTCATCGCGCACCGCATCACGTGAAGCTCCGACGGTGTTGGCAAGATCTTCAACGGCATCTTCATGG
GAAAGTGTGCGAGGAGGCACATCGAAAGACATTCCGCCCATGGCGGCCGGAGGTGCACCCATGCCTC-------------
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>chr1D_2490
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-----------------GAGCATCTCCAACAGGCGCCGAACGCGCCGCGCGCAAAAAACTGCTTTGCCGCGCGCCCATCG
CCTGGTTTGGCGCGGCGTGCAGTGCTGGCTCCAGCAGCCGTGCTAAAATGCAGCG----CGCGCGCCGCTCCAGCAGCAC
GCAAAAAATGCAGCGCGCGCGACT-CGCCGGGGCATTGCATATATGGCATTTTGAACACAAAATGAAGTTGAAACATTCA
AAATGCAATGAACATGACATAT--AAATTTTCACACAAACAAGTTGATGAAGAAAAGTTCATGCCCAC------------
--------AAG--------------------TTCATCCAACCAAGTTCAAAATGCAAATCAAGTTCAATACACAAATGA-
-AAGACACATCATTCCTCGTCC------------------TCATCTTCGGAATACGATTCTTCCGCCTCCGAAGATGAAT
CTTCCTCCCTCTCCTCATCGCGCACCGCATCACGTGAAGCTCTGACGGTGTTGGCAAGATCTTCAACGGCATCTTCATGG
GAATGTGTGCGAGGAGGCACATCGAAAGACATTCCGCCCATGGCGGCCGGAGGTGCACCCATGCCTCCCATGAGAGAAGC
AAAACTCATGCCTTCCATGGTGGCCATAGCGTCGGGGG-TGCTCCAAAGCCAGCAATGCCTCCCATTGCACCGCCCACGG
TACCTCCGAAGCCACCCATGCCACCCATGGCGCCGAGGC------------------------CACCGCCACCCATTGCA
CGAACCATGGCTCTTTTTTGGATCAAGACTTCTTCACGGGCAAGATTGACATACTCCTTTTGCACCGCATTGAGGTTAGA
TGTGTCCAAGAAGAACAAGTGCTTCTCCCATTCCAACAATCTAATTCGCTCCTCATTGCTCACCTTCCTCTCCTCCAAAG
CCACCTTCCTCTCCTCGGCCGCCACCCTCCTCTCCTCGGGCGCCAACCTCCTCTCCTCGGCCGCGGCATCTTGGTTCCTT
GCCATTTTCCTCACCTCGTTGGCTTCTTTTTTTGCCTTCACAATAGCTTCCATAGCATTTTTGAGCTCATCATCTCCTTT
CCTCTTCTTCTTTTCGGTTTTGTCTTTCTTGCACCCATCCGGTCGCTTTGGCTTCGAGTATGAAACCGAGTTGGGTGTGG
GGCTTCTCTTGCCGTCATCACTTGATGCATCATCCTCCTCATCATCATCATCCAACTTAATTGTTCGCTTGCGTTTGTTG
CTCAAATGCAAATCATCCAAATCTTCACGCTTCTTCCATTTCTCATCATCCTTCAACACGTTATAGCAATGGGGCAAGGT
AAAGACCCTTCCTTTCTTGATCTTCCCCTTCTTGGTTGTCCTCTCCTCTTCTTTGAACAAGTTTTGCGCAATGTTGTACT
ACATGAAAACAAAGCAAGTTAGCACCAACAACAAGTATGATGAACATGTATGATGAACATGTATGATGAACATGTATGAA
ATGCCACTTACTCTATCGTCCTC---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--GCCTTCGAGGTGCCGGAGCCGTCCGCCGCCTTGTTTTTCTTCGCCGATGTCTTGCCCTTCTTTGGCCGCGCCGCATTG
GGGAGCTTTGAGGAGGCGGCGGCGGCTCGGGCCGGCGCCGGCGCGACGCCACCCGCCGCCGAGGTCATCCGCGG
>chr7B_2490
--------------------------------------------------------------------------------
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-----------------GAGCATCTCCAACAGCCGCGCTTCGCGCCGTGCGTTAAAAACTAGTATGCCGTGCGCGCTTCG
GCTGGTTTAGCGCAGCCGCCGGCGCTGGCTCCAACAGCCGCGCTATAATGCAGCGCG--CAT--GCCGCTCCAGCAGCGC
GCAAAAAATGCAGCGCGCGCAACT-CGCC-GGGCATTGCATATATGGCATTTTGGACACAAAATGAGTTTGAAACATTCA
AAATGCAATGAACATGACATAT--AAAATTTCACACAAACAAGTTGATGAATAAA-GT--------------------TC
ATGCCCACAAG--------------------TTCATCCAACCAAGTTCAAG------------------ACACAAATGA-
-AAGACACATCAATCCTCTTCCTCGTCT------TCGTCCTCATCTTCCGAAGACAATTCTTCCGCCTCCGAAGATGAAT
CTTCCTCCCTCTCCTCATCACGCACCGCATCACGTGAAGCTCCAACGGTGTTGGAAAGATCTTCAACGACATCTTCATGG
GAATGTGTGTGAGGAGGCACATCGAAAGACATTCCGCCCATGGCGGCCGGAGGTGCACCCATGCCTC-------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>chrUn_2490
--------------------------------------------------------------------------------
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-----------------GAGCATCTCCAACAGCCGCGCTTCACGCCGCGCGCTAAAAACTAGTTTGCCGCGCGCCATTCT
CCTGGTTTTGTGCGGCCGCCGACGCTGGTTTCAACAGCCGCGCTAAAATGCAGTGCACACGCGCGCCGCTCCAGCAGCGC
GCAAAAAAAGCAGCGCGCGCGACT-CGCCGTGGCATTGTATATATGGCATTTTGCACACAAAATGAATTTGAAACATTCA
AAATGCAATAAACATGACATAT--AAAATTTCACACAAACAAGTTGATGAATAAAAGT--------------------TC
ATGCCCACAAG--------------------GCCATCCAACCAAGTTCAAG------------------ACACAAACAA-
-GAGACATATCAATCCTCGTCCTTGTCTTCA------TCCTCATCTTCCGAAGACGATTCTTCCGCCTCCGAAGATGAAT
CTTCCTCCCTCTCCTCACCGCGCACCGCATCACGTGAAGCTCCGGCGGTGTTGGCAAGATCTTCAACGGCATCTTCATGG
GAATGTGTGTGAGGAGGCACATCAAAAGACATTTCGCCCATGGCGGCCGGAGGTGCACCCGTGCCTC-------------
--------------------------------------------------------------------------------
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>chr3D_2490
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-----------------GAGCATCTCCAACAGGCGCCGAACGCGCCGCGCGCAAAAAACTGCTTTGCCGCGCGCCCATCG
CCTGGTTTGGCGCGGCGCGCAGCGCTGGCTCCAGCAGCCGCGCTAAAATGCAGCGCG--CGCGCGCCGCTCCAGCAGCGC
GCAAAAAATGCAGCGCGCGCGACT-CGCCGGGGCATTGCATATATGGCATTTTGAACACAAAATGAAGTTGAAACATTCA
AAATGCAATGAACATGACATAT--AAAATTTCACACAAACAAGTTGATGAAGAAAAGTTCATGCCCACAAGTTCAAAATC
ATGCCCACAAG--------------------TTCATCCAACCAAGTTCAAAATGCAAATCAAGTTCAATACACAAATGA-
-AAGACACATCATTCCTCGTCCTTGTCTTCGTCCTCGTCCTCATCTTCGGAAGACGATTCTTCCGCCTCCGAAGATGAAT
CTTCCTCCCTCTCCTCATCGCGCACCGCATCACGTGAAGCTCCGACGGTGTTGGCAAGATCTTCAACGGCATCTTCATGG
GAATGTGTGCGAGGAGGCACATCGAAAGACATTCCGCCCATGGCGGCCGGAGGTGCACCCATGCCTCCCATGAGAGAAGC
AAAACTCATGCCTCCCATGGTGGCCATAGCGTCAGGGGGTGCTCCAAAGCCAGCAATGCCTCCCATTGCACCGCCCACGG
TACCTCCGAAGCCACCCATGCCACCCATGGCACCGAGGCCACCGCCACCCATTGCGCCGAGGCCACCGCCACCCATTGCA
CGAACCATGGCTCTTTTTTGGATCAAGACTTCTTCACGGGCAAGATTGACATACTCCTTTTGCGCCGCATTGAGGTTAGA
TGTGTCCAAGAAGAACAAGTGCTTCTCCCATTCCAACAATCTAGTTCGCTCCTCATTGCTCACCTTCCTCTCCTCCAAAG
CCACCTTCCTCTCCTCGGCCGCCA---------------------ACCTCCTCTCCTCGGCCGCGGCATCTTGGTTCCTT
GCCATTTTCCTCACCTCGTTGGCTTCTTTTCTTGCCTTCACAATAGCTTCCATAGCATTTTTGAGCTCATCATCTCCTTT
CCTCTTCTTCTTTTCGGTTTTGTATTTCTTGCACCCATCCGGTCGCTTTGGCTTCGAGTATGAAACCGAGTTGGGTGTGG
GGCTTCTCTTGCCGTCATCACTTGATGCATCATCCTCCTCATCATCATCATCCAACTTAATTGTTCGCTTGCGTTTGTTG
CTCAAATGCAAATCATCCAAATCTTCACGCTTCTTCCATTTCTCATCATCCTTCAACACGTTATAGCAATGGGGCAAGGT
AAAGACCCTTCCTTTCTTGATCTTTCCCTTCTTGGTTGTCCTCTCCTCTTCTTTGAACAAGTTTTGCGCAATGTTGTACT
ACATGAAAACAAAGCAAGTTAGCACCAACAACAAGTA--------------------------TGATGAACATGTATGAA
ATGCCACTTACTCTATCGTCCTCATTTGTGCCACTTGGGTTCAACTTGTCAACCGCCTTTTGACAGGCCGCCCACCTTTG
ACAATCCGAGTTGATTGTCGACCATCGGGACCGAAGTGATCTCTCGGAGCGGTCAATTCCACTCAAGTTGTGAACATCAA
AGTGTTCTTTCATCCGCCCCCAATAAGCATCTCTACTTTGATCACCTCCAACGGATGGATCCCTCGACACTTGCAACCAA
GTATTGCATAGTAAGATGTCATCGACGTTGGTGTAATTGCCCGCTCTTCCTTTCGGTGCGTCGACAATGCCCTCACCCTC
CTCGTCCACCTCGAACTCATGGTCTTCGAAATGCATGTCATTGGTTTGAGACCAATGCGAATTGTTGGAGCCAACACCCA
TCGTTGACATGTATGCATCATCATTGAGACTACAAAATTTTTTTTTTAACAATGCAAATAAGCTATCTATATGTGAATGC
ATTGAAAAAATAACAAAAAA--TGAAAAGTTAGAATTTTTTTTACCTTGGGGGCATTTCGTCGAACATGTTGTGCGCGTC
GGCCGCCGGCTCAACGAGTGAGCTCGCCGGCGCTTCGGTAGCCGCCGCGCCTGTCGCACGC--TGCAAGCTTCTTCCTCC
TCGCCTTCGAGGTGCCGGAGCCATCCGCCGCCTTGTTTTTCTTCGCCGATGTCTTGCCCTTCTTTGGCCGCGCCGCATTG
GGAAGCTTTGAGGAGGGGGCGGCGGCTCGGGCCGGCGCCGGCGCGACGCCACCCGCCGCCGAGGTCATCCGCGG
>chr2A_2491
--------------------------------------------------------------------------------
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------------------AGCATCTCCAACAAGCGTCGGACACGCGGCGCGCAAAAAACAGATTTGT--CGTGCGCATCG
TTTGGTTTGGCGTGGCGCGCAGCGCCCGCTCCAGCAGCCGCGCTGAAATGGAGCGCG--CGCGT--CGTTTCAGCAGCGC
AC-AAAAATGCAGCGCGCGCGACT-CGCCGGTGTATTGC--ATATGGCATTTTTAACACAAAATGA--------------
--------TGAACATTTTCAACACAAAATTTCACACAAACAAGTTGATGAAAAAAAGT--------------------TC
ATGCCCACAAG--------------------TTCATCCAACCAAATTCAAAATGCAAATCAAGTTCAATACACAAATGAG
AAAGACACATCATTCC------------TCGTCCTCGTCCTCATCTTCGGAAGACGATTCTTCCGCTTCCGAAGATGAAT
CTTCCTCCCTCTCTTCATCGCGCACCGCATCACGTGAAGCTCCGACGGTGTTGGCAAGATCTTCAACGGCATCTTCATGG
GAATGTGTGCGAGGAGGCACATCGAAAGACATTCCGCCCATGGCGGTCGGAGGTGCACCCATGCCTC-------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>SNPs
S-SS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------S--------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
---S---------------------S---------------------S------------------SS------------
-------------S---------------S-------------------------------------------S------
--S---------------------------S---------------S------------------S--------------
-------------S-------S-------S----------------SS--SS------S--------------------S
-------------S----S------------------------------S--S------------------S--------
----------------------------------------S-------------------------S-------------
-S-------------S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S----S---------
------S-----------------------S-----S----------S--------S--------S------------SS
SSSSSSS-------------------------------------S----S---S-S----S--S----------------
-------SSSSSSS--------------S-----------------------------------------------S---
---------------------------S---------------------------------------S------------
---------------S-------------------------------S-----------S----------------S--S
-S-------S-SS------------S----------------S--------S--------------------S-------
----------S--------SS-------------------------------------------S--SS-----------
--------S--------------------S-----S--S------------------S---------------------S
SSS----------S--------------------------S--S-S-S-----------S-----SSSS------S----
----SSS---S-----S-----------------S-S------------S----------------S-----------S-
--------------------SSSSSSSSS-------S----S----------------------S---------------
---S--------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
---------------------S---------------------S----------S-------------------------
----------------------------------S-----------------------------SSS-------------
-S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS---S------S--------------------------------------------------------
---------------------------------------S----------------------------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
S-------------------------------------S-----------------------------------------
------------------------------------------S-------------------S----SS-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S-S--------------------------------
>forward_65
---------------------------------------------TCCTCCTCACCAAGTCGCTA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2992
--------------------------------------------------------------------------------
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-------------------------------ACTGTTTTGGCACCGAAGGA-----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>forward_1714
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------CCGCACTCTTCAAACAACGG----------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3398
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------GGTCCGCCTATCTTTCTCCG-----------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
