>input_sequence_59501
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-----------------ATGAAGCTCGTCGGA---------AAAAGCCTCGCCCGCGACGGGCCCGGCTCCGTCAAGCTA
TTGCCGGAGGTGGATGACGACCTGTGGGACGCCTACAACCTCATCGCCGCCGGCGACGCCGTCGAGGCCGTCACTGTCCG
GAAGATCACGAGGTCCGGAGGCCGCGACGCGGAGCGCATCAAGCTGACGCTAGAGGTCGCGGTCGAGTCCACGGACTACG
ACAAGGACGGCTCCGTCCTGCGCGTCCGCGGCAAGAACCTCACCAAGAACGAGCACGTCCAGATCGGCCAGTACCATACC
TTGGAGATCGAGCTGCGGAGGCCCTTCGTCCTCCGCAAGGAGGCCTGGGACTGGCCCGCGCTCGACACCATCCGCAAGTC
CTGCGACGAGACCGCAGCCAACGCCGACCTCGCCGTGCTCCTCATGCAGGAAGGCCTCGCCCACCTCTTCCTCGTCGGGA
GGAGCGTCACGGCCACCAGAGCGCGCGTGGAGGTGCCCATCCCCAGGAAGCACGGCTCCAGCTCCGGCGCCGTCGCCGCC
TACGACACCGCCCTCAAGGACTTCTTCCAGCGCGTCCTGGCCGCCTTCGTGCACCACGTCGACTTCGACCTCGTCCAGTG
CGTGGTGATCGCCAGCCCCGGCTTCACCAAGGACCAGTTCCGCGACCACATGCTCCTGGAGGCCGCCCGGCGAGGGGAGC
TGCGCGCCATCACGGAGCACAAGGCGCGCATCGTGCTCGCACCCGCGCCCTCGGGCTACCCGCACAGCCTCAAGGACGTC
CTGGCCGCCCCGAGCGTCCTGTCGCTGATAAAGGACACCAGGGCCGCGCTGGAGGTGCCGGCGCTGCAGGAGTTCTATGC
CATGATCGCCAAGGACTCGGCGAGGGCTTGCTACGGGCCCAAGCACGTCGAGGTCGCGCATGAACGTCTCGCCATCCAGA
CCCTCTTGCTGACGGACACTTGGTTCCGAAACCCTGACGTTGTTGCTAGGCGCAAGTGCGTCGATTTGGCCGAGTCCGTG
AAGAAGGTCGGTGGCAAGGTGTGCGTCTTTTCGTCCATGCATGTCTCCGGCAATCAGCTCGAGCAGCTCACGGGGATAGC
CGCAGTTCTTCGTTTTCCCATGCCTGATCTCGACGACATCGAGATGTGA-------------------------------
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>chr6A_1_TraesCS6A01G352100
ATCAAAATGATTGTAATACAAGCTGATAGATTCTAAAATATATGCTGAACTTCTTTTTAACTATGTGATGAAGTTTTTTG
AAATATGCACTGCTC-TTTTTTAATCACACGATTAACATTTTATAAGTTTAACTTTTGAAAATTTAATACTTTTTGAAAA
AATAAATATATATTATAGGGGAAAAGGTAAAATAAATAAATAATAAAATATCTGAAGTGTTTCCCAAAAATAAAACAAAA
ATGATAAAGAAGGAAGTGCAAGCTAAAGTTATATTGGATTCTCCGTTGATTTAT--------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------AGACGGACTTGTAGTGGAGGCA
AATTGCCATGGACACCTTCCCGCAAAAAAGAAAAGAAAAGAAATTGCTATGAACTAGGGTCTTTTCGCTTAGGCGTAGAC
AATTTGTTTAGAGATGGCCTAAAACACATTTACTATAACCCTTTTATTGAGATTAGAATGGTTGTACAAAAACCATACTC
TAATTTTTGTATGTGTACCATGCTCGTCAACGTACTACTGGTATGAATTTCTGCTAGACCTCATCGTGGGCCTCTGTGTC
GTGGCCGGGCACAATTCGAATGTTGTAGACGGACTTGTAGTAGAAGCAAATTGTTATGGACACCTTCCCTCAAAAAGAAA
AGAAAGAAAATTGCTATGGGCGTCGTGC-ATCCGTGTGCAGC--TGGGTCGGCCGCTAATTACGTGCGCATGTAGCTTAG
CTTAGGGTTAGGGAAACCAACTCTA--------TCTTC-CCTGCTCTATCTGAACTCGGAGTCGATCGGGCCTCCGCTGA
T--CGAAACCAACGTTATAAATAGCTATCA-C---CCTC--C--------GTCTGTCCATTG----ATCCAACACGTTC-
-GCTCCGCTCGCAACTCACGAAA------ACAACCGCTAGCTCAGATTGGTATATGCTCCGGTCGCCGCTTTCGCATCCA
TCGCTCACCG------C---CGTCGACACCGTCAAGACAGGTCTCCCGTCTCTCTCGACAACAACGAGACCGCCGCGCAC
TTTGATCC---TGAACGATGAAGCTCGTCGGA---------AAAAGCCTCGCCCGCGACGGGCCCGGCTCCGTCAAGCTA
TTGCCGGAGGTGGATGACGACCTGTGGGACGCCTACAACCTCATCGCCGCCGGCGACGCCGTCGAGGCCGTCACTGTCCG
GAAGATCACGAGGTCCGGAGGCCGCGACGCGGAGCGCATCAAGCTGACGCTAGAGGTCGCGGTCGAGTCCACGGACTACG
ACAAGGACGGCTCCGTCCTGCGCGTCCGCGGCAAGAACCTCACCAAGAACGAGCACGTCCAGATCGGCCAGTACCATACC
TTGGAGATCGAGCTGCGGAGGCCCTTCGTCCTCCGCAAGGAGGCCTGGGACTGGCCCGCGCTCGACACCATCCGCAAGTC
CTGCGACGAGACCGCAGCCAACGCCGACCTCGCCGTGCTCCTCATGCAGGAAGGCCTCGCCCACCTCTTCCTCGTCGGGA
GGAGCGTCACGGCCACCAGAGCGCGCGTGGAGGTGCCCATCCCCAGGAAGCACGGCTCCAGCTCCGGCGCCGTCGCCGCC
TACGACACCGCCCTCAAGGACTTCTTCCAGCGCGTCCTGGCCGCCTTCGTGCACCACGTCGACTTCGACCTCGTCCAGTG
CGTGGTGATCGCCAGCCCCGGCTTCACCAAGGACCAGTTCCGCGACCACATGCTCCTGGAGGCCGCCCGGCGAGGGGAGC
TGCGCGCCATCACGGAGCACAAGGCGCGCATCGTGCTCGCACCCGCGCCCTCGGGCTACCCGCACAGCCTCAAGGACGTC
CTGGCCGCCCCGAGCGTCCTGTCGCTGATAAAGGACACCAGGGCCGCGCTGGAGGTGCCGGCGCTGCAGGAGTTCTATGC
CATGATCGCCAAGGACTCGGCGAGGGCTTGCTACGGGCCCAAGCACGTCGAGGTCGCGCATGAACGTCTCGCCATCCAGA
CCCTCTTGCTGACGGACACTTGGTTCCGAAACCCTGACGTTGTTGCTAGGCGCAAGTGCGTCGATTTGGCCGAGTCCGTG
AAGAAGGTCGGTGGCAAGGTGTGCGTCTTTTCGTCCATGCATGTCTCCGGCAATCAGCTCGAGCAGCTCACGGGGATAGC
CGCAGTTCTTCGTTTTCCCATGCCTGATCTCGACGACATCGAGATGTGATGATAACTAAGGGCTATGCTTATATTTTTCT
TCTACTACTACTAGGGTGTACTACGCTCTCTGTTTCACTTTTA---CTTGAAC------TATGGTTTTAGATGT---CT-
C-AATACACAACTTTGATCACTTATTTATATTATACGATG------TGTTATTTATGTAACCAAGCAAAGTT--TATACA
TT---GTGGAGGTGTCTTTTTCA---TTGAAAATATCAACGCGAAAATCT----AAGTTACTAAGCTCCGTGGAATTGCT
AGCACGTGGTGGC----TTGTGGCTTTTATAAGGTAATGATGGGGCCCGGTTGAAAGTGTGAGTATCGTTACGTGACGGA
GTGAAGTCTATTTTAAACTTTGAAAGTTATAGAGCCCGTTCAAAATAAACCCTCACCTCAAAATCCCTGAAGTTTGTA-C
ATGTACTCATGATCCTAGTCTGATCCCGACCCCGAAACTGTTTGGCACACCCGGAAACATTCCATCCCACCCAGGATCAG
AGTCTACCCTCACTTACATCGTTACCCCACG-TGCCAATCCATTCTCTCTCTCTCTCTCGCTCTCTCTCGCTCG--CTCT
CTCTCCTGAAATCAACGCAGACGTGTCTGTGCCGCATCGCCGGTGC----------------------------------
--------CGTGCGCTGCTCCAGTCCATGCCAGGACCCGGGCTGCGCGTCGGCAGTACGCCTCATGCCGAGGAGTCCGTG
CTCTCGTCGTGAGTAGAGGAGAGCAAGATGATGAGGTGGT--GCCCGCACATCGGTGCTCCCCTGGCC---------ATG
CAATTAGTGGGGTAGCACGGCATC-GAGTAGCTTGACGTGGTGTGTGCGACCACGGCCTATACTTGGTCCTTGTTGAGAG
AGTTTGTTGCATGCAACGTTCAAGTCAAGACCGGTTCCTGCCTCCAACAACAAACCTCCACATCTGGCGGAAAAGTAGGA
TCGCTCCAGACGATCAAGGGAAGCGACGAGGGTTCCCTTGCGCGCCGCCGGTGACGCCGTCGGTTCCCTCTCTCTTCGTC
GACCGCTCTGGCGGCGGGAGGGA
>chr6B_1
ATCAAAATGATTGTAATACAAGCCGATATATTCTAAAATATATGCTGAACTTCTTCTTAACTATGCGATGAAGTTTTTTG
AAATATGCAGTGCTCTTTTTTTAATCACACGATTAACATTTTATGAGTTTAATATTTGAAAATTTAATACTTTTTGAACA
AATAAATATATATG---GGGGAAAAGGAAAAAAATAAA---AATAAAATATCTGAAGTGTTTCCTGGAAATAAAACAAAA
GTGATAAAGAAGAAAGTGCAAGTTAAAGTTATATTGGATTCTCCGTTGATTTACTGACGGATTTTTTTAACACAGTACAG
ACGCAAGCACTCATACATACGTGCATACACTCACTCCTATAGTATACACACACCCTATCCGTGTGAGCACCTCCGAGAGA
CTGAGTCGGCATATCATCTTGATAAATTCAGGAATAATGCGAAGACCATGACTTCAACCCTGATGGACTGGGGATATCAC
CGTCCCTCTAACCATCTAGGTTCGCTACAGGCAGACCTTTTTTTTTAACGTGCGCTGCAGGCGGACTCGTAGTAGAGGCA
AATTGCTATGGACAACTTCCCGCAAAAAAGAAAAGAAAAGAAATTGCTATGGACA-------------------------
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--------------------------------------------------------------CCAGGCTCGT--------
----------------TGGGCGTTGTGCTATCCGTGTGCAGC--TGGGTC-GCCGTTAATTACGTCCGCATGTCGT----
-TTAGGGTTAGGGAAACAAACTCTG--------TCTTC-TCTGCTCGATCTGAACTCGGAGTCGATCGGGCCTCCGCCGA
T--CGAAACCAACGTT--AAATAGCCACCA-C---CCTC--C--------GTCTGTCCATTG----ATCCAACACGTTC-
-GCTCCGCTCGCAACTCACGAAA------ACAACTGCAAGCACAGATTGGTATATGCTTCGGTCGCCGCCGTCGCATCCA
TCGCTCGCTG------CGGTCGCCG---CCGTCAAGACAGGTCTCCCGTCTCTCTCGAGAACAACGAGACCGCCGCGCAC
TTTGATCC---TGGACGATGAAGCTCGTGGGA---------AAAAGCCTCGCCCGCGACGGGCCCGGCTCCGTCAAGCTG
CTACCGGAGGTGGATGACGACCTGTGGGACGCGTACAACCTCATCGCCGCCGGCGACGCCGTCGAGGCCGTCACGGTCCG
GAAGATCACCAAGTCCTGGGGCCGCGACTCGGAGCGCGTCAAGCTGACGCTGGAGATCGCGGTCGAGTCCACGGACTACG
ACAAGGACGGGTCCGTCCTGCGCGTCCGCGGCAAGAACCTCTCCAAGAACGAGCACGTCCAGATCGGCCAGTACCACACC
CTGGAGATCGAGCTGCGGAGGCCCTTCATCCTCCGCAAGGAGGCCTGGGACTGGCCGGCGCTCGACACCATCCGCAAATC
CTGCGACGAGACCGCCGCCAACGCCGACCTCGCCGTCCTCCTCATGCAGGAAGGGCTCGCCCACCTCTTCCTCGTCGGGC
GGAGCGTCACGGCCACCAGGGCGCGCGTCGAGGTGCCCATCCCAAGGAAGCACG------GCTCCGGCGCCGTCGCCGCG
TACGACACCGCCCTCAAGGACTTCTTCCAGCGCGTCCTCGCCGCCTTCGTGCAGCACGTCGACTTCGGCCTCGTCCAGTG
CGTGGTGATCGCGAGCCCGGGCTTTACCAAGGACCAGTTCCGCGACCACATGCTCCTGGAGGCCGCGCGGCGAGGGGAAC
TTCGAGCCATCACAGAGCACAAGGCGCGCATTGTGCTCGCGCCCGCGCCCTCAGGTTACCCGCACAGCCTCAAGGACGTC
CTGGCCGCCTCGAGCGTCATGTCGCTGATAAAGGACACGAGGGCCGCGCAGGAGGTGCCGGCGCTGCAGGAGTTCTTCGC
CATGATCGCCAAGGACTCTACACGGGCTTGCTACGGGCCCAAGCACGTCGAGGTCGCGCATGAACGTCTCGCCATCCAGA
CCCTCCTGCTGACGGACACTTGGTTCCGCAACCCTGACGTTGCGGCTAGGCGCAAGTGCGTCGATTTGGCCGAATCGGTC
AAGAAGATCGGTGGCAACGTGTGCGTCCTTTCTTCCATGCATGTCTCCGGCGATCAGCTGGAGCAGCTCACGGGGATAGC
AGCGGTTCTTCGTTTTCCCATGCCTGATTTGGACGACATCGAGATGTGAT------------------------------
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>chr6D_230
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----------------------------------------------------------------------TAAAACAAAA
GTGATAAAGAAGGAAGTGCAAGCTAAAGTTATATTGGATTCTCCGTTGATTTAT--------------------------
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----------------------------------------------------------AGACGGACTTGTAGTAGAGGCA
AATTATTATGGACACCTTCCCGCAAAAAAGAAAAGAAGAGAAATTGCTATGGACAGAAAAG-------------------
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-----------------------------------------------AAATTGCAATGGACACCAGGCTCGT--------
----------------TGGGCGTTGTGCTATCCGTGTGCAGC--TGGGTCGC---------------------CGT----
-TTAGGGTTAGGGAAACAAACTCTA--------TCTTC-TCTGCTCGATCTGAACTCGGAGTCGATCGGGCCTCCGCCGA
------AACCAACGTT--AAATAGCCACCA-CCCTCCTC--C--------GTCCGTCCATTGATCCAACACGTTCGCTCC
GGCTCCGCTCGCAACTCACGAAA------ACAACTGCAAGCACAGATTG---TATGCTTCGGTCGCCGCCTTCGCATCCA
TCGCTCGCCGTCGCCGC---CGCCG---CCGTCAAGACAGGTCTCCCGTCTCTCTCGACAACAACGAGACCGCCGCGCAC
TTTGATCC---TGAACGATGAAGCTCGTCGGA---------AAAAGCCTCGCCCGCGACGGGCCCGGCTCCGTCAAGCTA
TTGCCGGAGGTGGATGACGACCTGTGGGACGCGTACAACCTCATCGCCGCCGGCGACGCCGTCGAGGCCGTCACGGTCCG
GAAGATCACGAGGTCCGGAGGCCGCGACGCGGAGCGCATCAAGCTGACGCTGGAGGTGGCGGTGGAGTCCACGGACTACG
ACAAGGACGGCTCCGTCCTGCGCGTCCGCGGCAAGAACCTCTCCAAGAACGAGCACGTCCAGATCGGTCAGTACCACACC
TT------------------------------------------------------------------------------
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------------------------------------------------------------------------GGGATAGC
AGCGGTCCTTCGTTTTCCCATGCCTGATCTCGACGACATAGAGATGTGATGATAATTGAGGGCTATGCT--TATTTTTCT
TCTACTACCACTAGGGTGTACTACGCTCTCTGTTTCACTTTTA---CTTGAAC------TATGGTTTTAGATGT---CT-
CGAATACACAATTTTGACCACTTATTTCTGTTATGCCATATAAA-----TATTTATGTAACCAGGCAAAGTT--TATACA
TT---GTGGAGGTGTTTTTTCCA---TGGAAAATATCAATGCAGAAATCTAC-CAAGTTAGTAAGCTCCCAAGAATTGCT
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>chr3D_664
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-----------------------------ATCCGTGTCCAGC--TGGGTC-GCCGCTAATTACGTGCGCATGTAGCATT-
----GGGTTACGGAAACGAACTCTGTCTACGGATCTAAACCTGCTCCATCTGAACTCGGAGTCGATCGGGTCTCCACCGA
------AACCAACGTT--ATAAATAG----TC---CGTC--C--------GTCCGTCCATTGATCCATCCAACACGTTC-
-GCTCCGCTCGCAGCTCACGACG------ACAACAGCAAGCACAGATCGGTTTATGCTTCCGTCCCCGCTCTCGCATCCA
TCGCTCGCCG------C---CGCCG---CCGTCAAGATCAGTCTCCCGTCTCCCTCGACAACAACGAGACCGCCGCGCAC
TTTGATCCAGCTGGACGATGAAGCTCGTGGGA---------AAAAGCCTCGCCCGCGACGGGCCCGGCTCCGTCAAGCTG
CTGCCGGAGGTGGATGACGACCTGTGGGACGCGTACAACCTCATCGCCGCCGGCGACTCCGTCGAGGCCGTCACGGTCCG
GAAGATCACGAGGTCCGGAGGCCGCGACTCGGAGCGCGTCAAGCTGACGCTGGAGGTGGCGGTCGAGTCCACGGACTACG
ACAAGGACGGCTCCGTCCTGCGCGTCCGCGGCAAGAACCTCTCCAAGAACGAGCACGTCCAGATCGGCCAGTACCACACC
CTGGAGATCGAGCTGCGGAGGCCCTTCCTCCTCCGCAAGGAGGCCTGGGACTGGCCGGCGCTCGACACCATCCGCAAGTC
CTGCGACGAGACCGCCGCCAACGCCGACCTCGCCGTGCTCCTCATGCAGGAAGACCTCGCCCACCTCTTCCTCGTCGGGC
GGAGCGTCACCGCCACCAGGGCGCGCGTCGAGGTGCCCATCCCCAGGAAGCACGGCTCC------GGCGCAGTCGCCGCG
TACGACACCGCCCTCAAGGACTTCTTCCAGCGCGTCCTCGCCGCCTTCGTGCACCACGTCGACTTCGGCCTCGTCCAGTG
CGTGGTGATCGCGAGCCCCGGCTTCACCAAGGACCAGTTCCGCGACTACATGCTCCTGGAGGCCACGCGGCGAGGGGAGC
TGCGCGCGATCACGGAGCACAAGGCGCGCTTCGTGCTCGCGCCCGCGCCCTCGGGTTACCCGCACAGCCTCAAGGACGTC
CTGGCCGCCCCGAGCGTCATGTCGCTGATAAAGGACATGAGGGCCGCGCAGGAGGTGCCGGCGCTGCAGGAGTTCTATGC
CATGATCGCCAAGGACTCGGCGCGGGCTTGCTACGGGCCCAAGCACGTCGAGGTCGCGCATGAACGTCTCGCCATCCAGA
CCCTCTTGCTGACGGACACTTGGTTCCGGAACCCCGACGTTGCTGCTAGGCGCAAGTGCGTCGATTTGGCCGAATCGGTG
AAGAAGGTCGGTGGCAATGTGCGGGTCTTTTCGTCCATGCATGTCTCCGGCAACCAGCTCGAGCAGCTCACGGGGATAGC
CGCGGTTCTTCGTTTTCCCATGCCTGATTTAGATGACATCGAGATGTGAT------------------------------
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>chr3B_664
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-----------------------------ATCCGTGTCCAGC--TGGGTC-GCCGCTAATTACGTGCGCATGTAGCATT-
----GGGTTACGGGAACGAACTCTATCTACGGATCTAC-CCTGCTCCATCTGAACTCGGAGTCGATCGGGTCTCCACCGA
------AACCAACGTT--ATAAATAGTCCGTC---CGTC--C--------GTCCGTCCATTGATCCATCCAACACGTTT-
-GCTCCGCAAGCAACTCACGACG---ACGACAACAGCAAGCACAGAACGGTTTATGCTTCCGTCCCCGCTCTCGCATCCA
TTGCTCGCCG------C---CGCCG---CCGTCAAGATCAGTCTCCCGTCTCCCTCAACAACAACGAGACCGCCGCGCAC
TCTGATCCAGCTGGACGATGAAGCTCGTGGGA---------AAAAGCCTCGCCCGCGACGGGCCCGGCTCCGTCAAGCTG
CTGCCGGAGGTGGATGACGACCTGTGGGACGCGTACAACCTCATCGCCGCCGGCGACGCCGTCGAGGCCGTCACGGTCCG
GAAGATCACGAGGTCCGGAGGCCGCGACTCGGAGCGCATCAAGCTGACGCTGGAGGTGGCGGTCGAGTCCACGGACTACG
ACAAGGACGGCTCCGTCCTGCGCGTCCGCGGCAAGAACCTCACCAAGAACGAGCACGTCCAGATCGGCCAGTACCACACC
CTGGAGATCGAGCTGCGGAGGCCCTTCCTCCTCCGCAAGGCGGCCTGGGACTGGCCGGCGCTCGACACCATCCGCAAGTC
CTGCGACGAGACCGCCGCCAACGCCGACCTCGCCGTGCTCCTCATGCAGGAAGGCCTCGCCCACCTCTTCCTCGTCGGGC
GGAGCGTCACCGCCACCAGGGCGCGCGTCGAGGTGCCCATCCCCAGGAAGCACGGCTCC------GGCGCCGTCGCCGCG
TACGACACCGCCCTCAAGGACTTCTTCCAGCGCGTCCTCGCCGCCTTCGTGCACCACGTCGACTTCGGCCTCGTCCAGTG
CGTGGTGATCGCGAGCCCCGGCTTCACCAAGGACCAGTTCCGCGACTACATGCTCCTGGAGGCCACGCGGCGAGGGGAGC
TGCGCGCGATCACGGAGCACAAGGCGCGCATCGTGCTCGCGCCCGCGCCCTCGGGTTACCCGCACAGCCTCAAGGACGTC
CTGGCCGCCCCGAGCGTCATGTCGCTGATAAAGGACACGAGGGCCGCGCAGGAGGTGCCGGCGCTGCAGGAGTTCTATGC
CATGATCGCCAAGGACTCGGCGCGCGCTTGCTACGGGCCCAAGCACGTCGAGGTCGCGCAAGAACGTCTCGCCATCCAGA
CCCTCTTGCTGACGGACACTTGGTTCCGGAACTCCGACGTTGCTGCTAGGCGCAAGTGCGTCGATTTGGCCGAATCGGTG
AAGAAGATCGGTGGCAATGTGCGGGTCTTTTCGTCCATGCATGTCTCCGGCAACCAGCTCGAGCAGCTCACGGGGATAGC
CGCGGTTCTTCGTTTTCCCATGCCTGATTTAGACGACATCGAGATGTGAT------------------------------
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-----------------------
>chr6A_666
--------------------------------------------------------------------------------
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-------------------------------CCGTGTCCAGCTGTGGGTCGGCCGCTAATTACGTGCGCATGTAGCTTAG
CTTAGGGTTAGGGAAACCAACTCTA--------TCTTC-CCTGCTCTATCTGAACTCGGAGTCGATCGGGCCTCCGCTGA
T--CGAAACCAACGTTATAAATAGCTATCA-C---CCTC--C--------GTCTGTCCATTG----ATCCAACACGTTC-
-GCTCCGCTCGCAACTCACGAAA------ACAACCGCTAGCTCAGATTGGTATATGCTCCGGTCGCCGCTTTCGCATCCA
TCGCTCACCG------CCGTCGACA---CCGTCAAGACAGGTCTCCCGTCTCTCTCGACAACAACGAGACCGCCGCGCAC
TTTGATCC---TGAACGATGAAGCTCGTCGGA---------AAAAGCCTCGCCCGCGACGGGCCCGGCTCCGTCAAGCTA
TTGCCGGAGGTGGATGACGACCTGTGGGACGCCTACAACCTCATCGCCGCCGGCGACGCCGTCGAGGCCGTCACTGTCCG
GAAGATCACGAGGTCCGGAGGCCGCGACGCGGAGCGCATCAAGCTGACGCTAGAGGTCGCGGTCGAGTCCACGGACTACG
ACAAGGACGGCTCCGTCCTGCGCGTCCGCGNNNNNNNNNN----------------------------------------
--------------------------------------------------------------------------------
----------------GCCAACGCCGACCTCGCCGTGCTCCTCATGCAGGAAGGCCTCGCCCACCTCTTCCTCGTCGGGA
GGAGCGTCACGGCCACCAGAGCGCGCGTGGAGGTGCCCATCCCCAGGAAGCACGGCTCCAGCTCCGGCGCCGTCGCCGCC
TACGACACCGCCCTCAAGGACTTCTTCCAGCGCGTCCTGGCCGCCTTCGTGCACCACGTCGACTTCGACCTCGTCCAGTG
CGTGGTGATCGCCAGCCCCGGCTTCACCAAGGACCAGTTCCGCGACCACATGCTCCTGGAGGCCGCCCGGCGAGGGGAGC
TGCGCGCCATCACGGAGCACAAGGCGCGCATCGTGCTCGCACCCGCGCCCTCGGGCTACCCGCACAGCCTCAAGGACGTC
CTGGCCGCCCCGAGCGTCCTGTCGCTGATAAAGGACACCAGGGCCGCGCTGGAGGTGCCGGCGCTGCAGGAGTTCTATGC
CATGATCGCCAAGGACTCGGCGAGGGCTTGCTACGGGCCCAAGCACGTCGAGGTCGCGCATGAACGTCTCGCCATCCAGA
CCCTCTTGCTGACGGACACTTGGTTCCGAAACCCTGACGTTGTTGCTAGGCGCAAGTGCGTCGATTTGGCCGAGTCCGTG
AAGAAGGTCGGTGGCAAGGTGTGCGTCTTTTCGTCCATGCATGTCTCCGGCAATCAGCTCGAGCAGCTCACGGGGATAGC
CGCAGTTCTTCGTTTTCCCATGCCTGATCTCGACGACATCGAGATGTGATGATAACTAAGGGCTATGCTTATATTTTTCT
TCTACTACTACTAGGGTGTACTACGCTCTCTGTTTCACTTTTA---CTTGAAC------TATGGTTTTAGATGT---CT-
C-AATACACAACTTTGATCACTTATTTATATTATACGATG------TGTTATTTATGTAACCAAGCAAAGTT--TATACA
TT---GTGGAGGTGTCTTTTTCA---TTGAAAATATCAACGCGAAAATCT----AAGTTACTAAGCTCCGTGGAATTGCT
AGCACGTGGTGGC----TTGTGGCTTTTATAAGGTAATGATGGGGCCCGGTTGAAAGTGTGAGTATCGTTACGTGACGGA
GTGAAGTCTATTTTAAACTTTGAAAGTTATAGAGCCCGTTCAAAATAAACCCTCACCTCAAAATCCCTGAAGTTTGTA-C
ATGTACTCATGATCCTAGTCTGATCCCGACCCCGAAACTGTTTGGCACACCCGGAAACATTCCATCCCGCCCAGGATCAG
AGTCTACCCTCACTTACATCGTTACCCCACG-TGCCAATCCATTCTCTCTCTCTCTCTCGCTCTCTCTCGCTCTCTCTCT
CTCTCCTGAAATCAACGCAGACGTGTCTGTGCCGCATCGCCGGTGC----------------------------------
--------CGTGCGCTGCTCCAGTCCATGCCAGGACCCGGGCTGCGCGTCGGCAGTACGCCTCATGCCGAGGAGTCCGTG
CTCTCGTCGTGAGTAGAGGAGAGCAAGATGATGAGGTGGT--GCCCGCACATCGGTGCTCCCCTGGCC---------ATG
CAATTAGTGGGGTAGCACGGCATC-GAGTAGCTTGACGTGGTGTGTGCGACCACGGCCTATACTTGGTCCTTGTTGAGAG
AGTTTGTTGCATGCAACGTTCAAGTCAAGACCGGTTCCT-----------------------------------------
--------------------------------------------------------------------------------
-----------------------
>chr6D_666
--------------------------------------------------------------------------------
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-------------------------------CCGTATCCAGCTGTGGGTCGGCCGCTAATTACGTGCGCATGTAGCTTAG
CTTAGGGTTAGGGAAACCAACTCTA--------TCTAC-CCTGGTCGATCTGAACTCGGAGTCGATCGGGCCTCC----A
CACCGAAACCAACGTTATAAATAGCTATCA-C---CCTC--C--------GTCCGTCCATTGATCCATCCAACACCTTC-
-GCTCCGCTCGCAACTCACGACG----CGGCAACAAGCAGCACGGATTTGTTTATGCTTCAGTCGCCGCTTTCGCATCCA
TCGCTCACCG------CCATCGCCG---CCGTCAAGACAGGTCTCCCGTCTCTCTCGACAACAACGAGACCGCCGCGCAC
GTTGATCC---TGAACGATGAAGCTCGTCGGA---------AAAAGCCTCGCCCGAGACGGGCCCGGCTCCGTTAAGCTG
CTACCGGAGGTGGATGATGACCTGTGGGACGCGTACAACCTCATCGCCGCCGGCGACGCCGTCGAGGCCGTCACGGTCCG
GAAGATCACCAAGTCCTGGGGCCGCGACTCGGAGCGCGTGAAGCTGACTCTCGAGGTCGCGGTCGAGTCCACGGACTACG
ATAAGGACGGCTCCGTCCTACGCGTCCGCGGCAAGAACCTTAGCAAGAACGAGCACGTCCAGATCGGCCAGTACCATACC
CTGGAAATCGAGCTGCGGAGGCCCTTCGTCCTCCGCAAGGAGGCCTGGGACTGGCCGGCGCTCGACACCATCCACAAATC
CTGCGACGAGACTGCCGCCAACGCCGACCTCGCCGTGCTCCTCATGCAGGAAGGCCTCGCCCACCTCTTCCTCGTCGGCC
GGAGCGTCACGGCCACCAGAGCGCGCGTCGAGGTGCCCATCCCCAGGAAGCACGGCTCCAGCTCCGGCGCCGTCGCCGCG
TACGACACCGCCCTCAGGGACTTCTTCCACCGCGTCCTGGCCGCCTTCGTGCACCACGTCGACTTCGGCCTCGTCCAGTG
CGTGGTGATCGCGAGCCCGGGCTTCACCAAGGACCAGTTCCGCGACTACATGCTCCTGGAGGCCGCGCGGCGAGGGGACC
TGCGCGCCATCACGGAGCACAAGGCGCGCATCGTCCTCGCGCCCGCGCCCTCGGGCTACCCGCACAGCCTCAAGGACGTC
CTCGCCGCCCCGACCGTCATGTCGCTGATAAAGGACACGAGGGCAGCGCAGGAGGTGCCGGCGCTGCAGGAGTTCTTCGC
CATGATCGCCAAGGACTCGGCACGGGCTTGCTACGGGCCCAAGCACGTCGAGGTCGCGCATGAACGCCTCGCCATCCAGA
CTCTCCTGCTCACGGACACTTGGTTCCGGAACCCCGACGTTGCTGCTAGGCGCAAATGCGTCGATTTGGCCGAATCGGTG
AAGAAGATCGGTGGCAAAGTGTGCGTCTTATCGTCCATGCATGTCTCTGGTGATCAGCTCGAGCAGCTCACGGGGATAGC
CGCGGTTCTTCGTTTTCCCATGCCTGATCTCGACGACATCGAGATGTGATTTATT------GCTCTGCTTT--TTTTT--
TCTACTACCACTAGGGTGTAC---GCTCTCTGTTTTACTTTTATTACTTGAAC------TATATATCGTGTGTCTCGCTC
C-AATACACAACTTTGATCACTTATTACTATTATTATACCATGTTTATTCAGTTTTGTAACCAGACAAAGTT--TATACA
TT---GTGAAGGTGATTTTT-CG---CTGAAAATATCAATCCGAAAATCTACCCAAGTTACTAAGCTCCCTAGAATTGCT
AGCACGTGGTGGC----TCGCGGC-TTTGTAAGGCATTGAT-GCGGCC--------------------------------
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-----------------------
>chr6A_742
--------------------------------------------------------------------------------
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-------------------------------------C-CCTGCTCGATCTGAACTCGGAGTCGATCGGGCCTCC----A
T--CGAAACCAAAGTTATAAATAGCTATCA-C---CCAACAC--------GCCCTTCCATTGATCCATCCAACACGTTC-
-GCTCCGCTCGCAACTCACGAAA------ACAACTGCAAGCACAGATTG---TATGCTTCGGTCGCCGCTTTCGCATCCA
TCGCTCACCG------CCATCGCCG---CCGTCAACACAGGTCTCCCGTCTCTCTCGACAACAACGAGACCGCTGCGCTC
TTTGATCCATCTGGACGATGAAGCTCGTCGGA---------AAAAGCCTCGCCCGCGACGGGCCCGGCTCCGTGAAGCTA
TTGCCGGAGGTGGATGACGACCTGTGGGACGCCTACAACCTCATCGCCGCCGGCGACGCCGTCGAGGCCGTCACGGTCCG
GAAGATCAGGAGGTCCGGAGGCCGCGACGCGGAGCGCATCAAGCTGACGCTGGAGGTCGCGGTGGAGTCCACGGACTACG
ACAAGGACGGCTCCGTCCTGCGCGTCCGCGGCAAGAACCTCACCAAGAACGAGCACGTCCAGATCGGCCAGTACCATACC
TTGGAGATCGAGCTGCGGAGGCCCTTCGTCCTCCGCAAGGAGGCCTGGGACTGGCCGGCGCTCGACACCATCCGCAAATC
CTGCGACGAGACCGCCGCCAACGCCGACCTCGCCGTGCTCCTCATGCAGGAAGGCCTCGCCCACCTCTTCCTCGTCGGGA
GGAGCGTCACGGCCACCAGAGCGCGCGTGGAGGTGCCCATCCCCAGGAAGCACGGCTCCAGCTCCGGCGCCGTCGCCGCC
TACGACACCGCCCTCAAGGACTTCTTCCAGCGCGTCCTGGCCGCCTTCGTGCACCACGTCGACTTCGACCTCGTCCAGTG
CGTGGTGATCGCCAGCCCCGGCTTCACCAAGGACCAGTTCCGCGACCACATGCTCCTCGAGGCCGCGCGGCGAGGGGAGC
TGCGCGCGATCACCGAGCACAAGGCCCGCATCTTGCTCGCGCCCGCGCCCTCGGGCTACCCGCACAGCCTCAAGGACGTC
CTCGCCGCCCCGAGCGTCATATCGCTGATCAAGGACACGAGGGCCGCGCTGGAGGTGCCGGCGCTGCAGGAGTTCTATGC
CATGATCGCCAAGGACTCGGCGAGGGCTTGCTACGGGCCCAAGCACGTCGAGGTTGCGCATGAACGTCTCGCCATCCAGA
CACTCCTGCTCACGGACACTTGGTTCCGCAACCCTGACGTTGTTGCTAGGCGCAAGTGCGTCGATTCGGCCGAATCGGTG
AAGAAGATCGGTGGCAAGGTGTGCGTCTTTTCGTCCATGCATGTCTCCGGCGATCAGCTCGAGCAGCTCACGGGGATAGC
AGCGGTTCTTCATTTTCCCATGCCTGATCTCGACGACATCGAGATGTGATTTATT------GCTCTGCTTA--TTTTTCT
TCTACTACTACTAGGGTGTAC---ACTCTCTGTTTTACTTTTA---CTTGGAACTATAATATCGTTTTAGACGT---CCC
G-AATACACAATTCTGATCACTTATTTCTATTATATGCCAC-----ATTTATTTATGTAAGCAGGCAAAGTTTATATACA
TT---GTGGAGCTGATTTTT-CA---TTGAAAATATCAGTGCAGAAATCTA-----------------------------
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>chr6A_742
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-------------------------------------C-CCTGCTCAATCCGAACTCGGAGTCGATCGGGCATA------
-ACCGAAACCAACGTTATAAATAGCTATCA-C---CCTC--C--------GTCCGTCCATTGATCCATCCAACACCTTC-
-GCTCCGCTCGCAACTCACGACGACGACGACATCAACAAGCACAGATTGGTATATGCTTCCGTCCCCGCTTTGGCATCCA
TCGCTCGCCG------CC------------GTCAAGAGAGGTCTCCCGTCTCCCTCGAGAGCAACGAGACCGCTGCGTAC
TTTGATCC---TGGACGATGAAGCTCGTCGGAAAAAGCGGCAAAAGCCTCGCCCGCGACGGGCCCGGCTCCGTCAAGCTG
CTGCCGGAGGTGGATGACGACCTGTGGGACGCGTACAACCTCATCGCCGCCGGCGACGCCGTCGAGGCCGTCACGGTCCG
GAAGATCACCAAGTCCTGGGGCCGCACCTCGGAGCGCGTGAAGCTGACGCTGGAGATCGCGGTCGAGTCCACGGATTACG
ACAAGGAAGGGTCCGTCCTGCGCGTCCGCGGCAAGAACCTCTCCAAGAACGAGCACGTCCAGATCGGCCAGTACCACACC
CTAGAGATCGAGCTGCGGAGGCCCTTCCTCCTCCGCAAGGAGGCCTGGGACTGGCCGGCGCTCGACACCATCCGCAAATC
CTGCGACGAGACCGGGGCCAACGCCGACCTCGCGGTGCTCCTCATGCAGGAAGGGCTCGCCCACCTGTTTCTCGTCGGGA
GGAGCGTCACGGCCACCAGAGCCCGCGTCGAGGTGCCCATCCCCAGGAAGCACGGCTCT------GGCGCCGTCGCCGCG
TACGACACCGCCCTCAAGGACTTCTTCCACCGCGTCCTGGACGCCTTCGTCAAGCACGTCGACTTTGACCTCGTCCAGTG
CGTGGTGATCGCGAGCCCGGGCTTCACCAAGGACCAGTTCCGCGACTACATGCTCCTGGAGGCCGCGCGGCGAGGGGAGC
TGCGAGCCATCACGGAGCATAAGGCGCGCATCGTGCTCGCGCCCGCGCCCTCGGGTTACCCGCACAGCCTCAAGGACGTC
CTGGCCGCCCCGGGCGTGATGTCGCTTATAAAGGACACGAGGGCGGCGCAGGAGGTACCGGCATTGCAGGAGTTCTTCGC
CATGATCACCAAGGACTCGGCGCGGGCTTGCTACGGGCCCAAGCACGTCGAGGTCGCGCATGAACGTCTGGCCATCCAGA
CTCTCCTGCTCACGGACACCTGGTTCCGGAACCCTGACGTTGCTGCTAGGCGCAAGTGCGTCGATTTGGCCGAATCGGTG
AAGAAGATTGGTGGCCAGGTGCGCGTCTTTTCGTCGATGCATGTCTCCGGCAATCAGCTCGAACAGCTCACGGGGATAGC
TGCTGTTCTTCGTTTTCCCATGCCTGATTTGGACGACATCGAGATGTGAT---AATTAAGGGCTCTGCTTG--TTGTTCT
TCTACTA-------------------------------------------------------------------------
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>chr6D_742
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-------------------------------------C-CCTGCTCGATCTGAACTCGGAGTCGGTCGGGCCTC------
-ACCGAAACCAACGTTATAAATAGCTATCA-C---CCTC--CCTCCCTCCGTCCGTCCATTGATCCATCCAACACCTTC-
-GCTCCGCTCGCAACTCACGACGACGACGACATCAACAAGCACAGATTGGTATAT------------GCTTTGGCATCCA
TCGC---------------TCGCCG---CCGTCAAGAAAGGTCTCCCGTCTCCCTCGAGAGCAACGAGACCGCTGCGCAC
TTTGATCC---TGGACGATGAAGCTCGTCGGAAAAAGCGGCAAAAGCGTCGCCCGCGACGGGCCCGGCTCCGTCAAGCTG
CTGCCGGAGGTGGATGACGACCTGTGGGACGCGTACAACCTCATCGCCGCCGGCGACGCCGTCGAGGCCGTCACGGTCCG
GAAGATCACCAAGTCCTGGGGCCGCACCTCGGAGCGCGTCAAGCTGACGCTGGAGATCGCGGTCGAGTCCACGGATTACG
ACAAGGAAGGGTCCGTCCTGCGCGTCCGCGGCAAGAACCTCTCCAAGAACGAGCACGTCCAGATCGGCCAGTACCACACC
CTGGAGATCGAGCTGCGGAGGCCCTTCCTCCTCCGCAAGGAGGCCTGGGACTGGCCGGCGCTCGACACCATCCGCAAGTC
CTGCGACGAGACCGGGGCCAACGCCGACCTCGCCGTGCTCCTCATGCAGGAAGGGCTCGCCCACCTGTTTCTCGTCGGGA
GGAGCGTCACGGCCACCAGAGCCCGCGTCGAGGTGCCCATCCCCAGGAAGCAC------AGCTCCGGGGCCGTCGCCGCG
TACGACACCGCCCTCAAGGACTTCTTCCACCGCGTCCTGGACGCCTTCGTCAAGCACGTCGACTTTGACCTCGTCCACTG
CGTGGTGATCGCGAGCCCGGGCTTCACCAAGGACCAGTTCCGCGACTACATGCTCCTGGAGGCCGCGCGGCGAGGGGAGC
TGCGAGCCATCACGGAGCACAAGGCGCGCATCGTGCTCGCGCCCGCTCCCTCGGGTTACCCGCACAGCCTCAAGGACGTC
CTGGCCACCCCGACCGTCATGTCGCTGATAAAGGACACGAGGGCGGCACAAGAGGTACCGGCATTGCAGGAGTTCTTCGC
CATGATCACCAAGGACTCGGCGCGGGCTTGCTACGGGCCCAAGCACGTCGAGGTCGCGCATGAACGTTTGGCCATCCAGA
CTCTCCTGCCCACGGACACTTGGTTCCGGAACCCCGACGTTGCTGCTAGGCGCAAGTGCGTCGATTTGGCCGAATCGGTG
AAGAAGATCGGTGGCAATGTGCGCGTCCTTTCTTCCATGCATGTCTCCGGCAATCAGCTGGAGCAGCTCACGGGGATAGC
TGCTGTTCTTCGTTTTCCCATGCCTGATTTGGACGACATCGAGATGTGAT---AATTAGGGTCTCTGCTTA--TTGTTCT
TCTACTAGGAACTGGATTCCCTAG-------------------------GAAC------TATCGTTTTAGATGT---CTC
G-AATACACAACTTTGATCACTTATTTTTGTATTTCTACTATATCATGTTTATTATATAACCAAGCAAAGTT--TATAAA
TTACTGTGGAGGTGGTATTTT-----------------------------------------------------------
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>chr6B_1639
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------------------------CACCAAGGACCAGTTCCGCGACCACATGCTCTTGGAGGCTGCGCGGCGAGGGGAAT
TGCACGCGATCTAGGAGCACAGGGCACGCATCGTGCTCGCGCTCGCGCCCTCAGGTTACCCACACAGCCTCAAGGACGTC
CTGGCCGCGCCGACCGTCATGTCGCTGATAAAGGACACAAGGGCCGCGCAGGAGGTGCCGGCGTTGCAGGAGTTCTTCGC
CATGATCGCCAAGGACTCGGCGCGGGCTTGCTACGGGCCCAAGCACGTCGAGGTCGCGCATGAGCGTCTCGCCATCCAGA
CCCTCCTGCTCACCGACACTTGGTTCCGCAACCCCGACGTTGCTGCTAGGCGCAAGTGCGTCGATCTGGCCGAATCGGTG
AAGAAGATCGGTGGCAACGTCCGCGTCCTTTCGTCGATGCATGTCTCCGGCAACCAGCTCGAGCAGCTCACGGGGATAGC
CGCGGTTCTTCGGTTTCCCATGCCTGATCTTGACGACATCGAGATGTGATGATAATTAAGGGCTATGCTTA--TTTTCCT
TCTACTACAACTAGGGTGTACTACGCTCTCTGTTTTAATTTTA---CTTGGAACTAATATATCGCTTTAGGTGC---CTC
G-AATACACAACTTTGATCACTTGTTTCTATTATAC-------------------------CAAGCAAAGTT--TGTACA
TT---GTGGGTGTGTGTTTTTTTCTTCTGAAAATATCAAT------ATCG----ATGTTACTAAGCTCCCTAGAATTGCT
AGCACTGGCTCCTGTCGTCGTGGC-TTTGTAAGGCATTGAT-GGGCCCGGTTGGAAGTGTGTGTTTATCGTT--------
--------------------------------------------------------------------------------
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>chr4B_2457
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------------------------------------------------------------------------------GA
GTGAAGTCTATTTTAAACCTTGAAA-TTATAGAGCCCGTCCAAAATGAACCCTCATCTTTAAATCCTTGAAATATGTACC
ATGTACTCATGATCCTGGTATGATTCCGACCCCGAACCTGTTTGGCACACCGGGAAACAATCCATCCCGCCCAGGATCAG
AGTCTACCCTCACTTACATCCTTACCCCACGATGTCAATCCATCCTCTCTCTCTCTCTC---------------------
-----------TCAACGCAGACGCGTCTTTGCCGCATTGCCGATGTCATGTGCCCCGTGCGCCTCGTGCCCACCATTGCA
AACAACGTCGTGCGCTGCTCCACTCCATGCCAGGACCCAGGCCGCGCGTCGGCTGTACGCCTCATGCCGAGGAGCCCGTG
CTCTCGACGTGAGTAGAGGATAGCAAGATGATGAAATGGTGCGCCCGCACGTCGGTGCTCCCCTGGGCCCTGGCCATATG
CAGTTCGTGGGGTAGCACGGCATCTGAGTAGCTTGACCACGGCTTCTG--------------CTTGATCCTTGTTGAGAG
TGTTTGTTGCATGCAACGTTC-----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>SNPs
-----------------------S----S--------------------------S---------S--------------
---------S----------------------------------S-------SS------------------------S-
-------------SSSS----------S----S-S-S-SSS-----------------------SSS-------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
------S--------------------------------------------S--SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------SS---------SSS-SSSSSSSSSSSS
SSSSSSSSSSSSSSSS-------S--------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------S--SSS----------------------------------------------------
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--------------------------------------------------------S-----------------------
---------------S----------------------------------------------------------------
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--------------------------------------------------------------------S-----------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
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---------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS
>forward_753
--------------------------------------------------------------------------------
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-------------TGTACCATGCTCGTCAACGT-----------------------------------------------
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>reverse_2949
--------------------------------------------------------------------------------
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--------------------------------------------------------------------ACCCAGGATCAG
AGTCTACCC-----------------------------------------------------------------------
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-----------------------
