>input_sequence_59477
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---------------------------------------------------------------------------ATGGT
TGCGGTGATGGAGGTGCGTCCACACCTCCTC---GTCCTTCTCTGCCTCCTTGGCGCCGGCGCCGGCGCCGGGATGGCGC
AGTCTTTGCCGCCGGCGCCGGTGCCGCAGTCCGGGGCGGCGGCGGCGGCGCCGAGGCCCACGCCGTTCGGGCGCACCATG
TCCACGGTCATCACCGTGGCCATCAGCGTCTTCTTCTTCCTGCTCTTCTTCTGCGCCTACATCAACCAGTGCCGCCTCGC
CGAGA---ACGCCGCGCCGCAGGGGGCCAACGCCGCCGCGGCCGGGGCCGGTGCGTCCAGGAGGGGGAAGCGCGGGCTGG
ACCCGGCGCTGGTGGCCACGTTCCCGATCATGCAGTACAGGGAGATCAAGGAGCACAAGATCGGCAGGGGCGTGCTGGAG
TGCGCCGTGTGCCTCACGGCGTTCGAGGAGGCCGACGACCTCCGGCTGCTGCCGCACTGCTCGCACGCCTTCCACCCGGA
GTGCATCGACCCCTGGCTCGAGGCGCGGATCACGTGCCCGCTGTGCCGCGCCAACCTCGAGAAGCCGCCGCCGCCGCCGC
AGCCGTCCGCCGTGGCGCCCCCGTCGCCCGAGCAGGCGGCGCTGCATCAGCCCTCGCCTTCGCCGTCCCCGCCGCACGCC
GTGGCGATACCGGTGCGGGAGGATG---AGGAGGA---CAGCGACGAGGACGACAGGAAGGAGGAGGCGATGGAGCTGGA
GATGCTGCGCAGCGAGCGGCGGGCGGCGAGGCTGCCGAGATCGCACTCGACGGGGCACTCGCTGTTCGCGGCGTCGGCGG
CCGCCGCCGAGCGGAGCGACCACGAGAGGTTCACGCTGCGGCTGCCGCACCACGTGAGGGAGCAGGTGCTCAGGTCGCGC
CGCCTGCGCCACGCCACCAGCCTGATCGACCTCGCCGGAGCGAGCCCCGAGGGGAGCGTGCGCGGAGGCCGGCCCGCGGG
CGGAGGAGGCGGCGGC------AGCAGCCACGGCGGGCGGCGGTGGCAGGCGTTCCTGGCGAGGACGATGTCGTGGGCCC
GAGGGGGAGGCGACGGGTCGGTGCGCAAGGGGTGGGACGGGTCCACCCGGAGGGGAAGGGACGACGCCGAGTCGAGCAGA
AAGGGGGCCGCTTCGCCGGCGG------CGGCGCGGCCATGA--------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------
>chr2B_1_TraesCS2B01G336300
GTACGAGAATAATGGACTCCGGAACAGTTTATGCTTTATTTTGGCAAATACAATCTGACAATATTGTCAGGTCAAGCGCC
GCAATATCGAAAGAAATATATTTTCAGGTCCAGCGTAACTAAGAGCACGCATGATTCTGCCACATGTGTGGCAGCGGTGT
ATGTTTTATTGGTTGCTTCGCTGCCATAGCCGAGCCATGTCACAATTTTGTACTCC------------------------
------TAGTAGCAGTTTGGCAGTTTTGCAAGCTTTGCTAAGCTGCGG--------------------------------
--------------------------------------------------------------------------------
----------------------CGAACATTTTCTTGTGACGTGCCACGGTTCAACAGGAAAGGTGTGACGAAGTTCAGCA
AGGAACGAACGTGCCTCAGGTGCCAACTACGCAGGT-----ACGGCTAAAGCTGAAGTTGGTAACTGATTGCACCCGTGT
TCATCCTGTGGAGCTCACGAATTGAGTGGCATATGATCTGTACAACTGCTCCACGA-GGGTAGGC---GACATCGCCTGA
TCGGTCACACTTCAGCATCTTGTTCTC-ATGCTCCACACATTTGG-----------------------------------
--------------------------------------------------------------------------------
-------------------------------------CCAGGTGTAGCATGCACCGGTGAGACAATACATGATTGTCCAT
GTCATATG-AAAACCAGTCACGATCTAGATGAGCTTGTTTAAGGATTTCTTGGCGTCATTGGGCAAGCCTCAGCTACCAC
ACCCACAATTTTCCAAAAAACTGGATTGATACTGC------ATTCTACAATTATGGCAAATTGTATGACATTTACGGTCG
ACAAAAGTATTAATAATCGCATCGCATTCAGTGT-----GATGGCAAAATCAGTAGTCAAAGCAGATCAATCTAGATGTA
GAAACGTGAAGGGGGGCC------TGTGATAC-TACAAGAGCAAAAGGCAAGTGTCCACTCGTCAGAAAATTTCTGCCCA
AGAAAGAAAGAAAGAAAAGGAAGGTGCGAATTTCCCTCGGGATTTTAGGCGCCGCCGCCGCCGCTAACGTAGCAGCACAC
CACACCGCCAGGCTCCAGCTGAG----------CTCTCTCTTGTAGAGCAGACCACCGCCTCACCTGCCAATTCTATGGT
TGCGGTGATGGAGGTGCGTCCACACCTCCTC---GTCCTTCTCTGCCTCCTTGGCGCCGGCGCCGGCGCCGGGATGGCGC
AGTCTTTGCCGCCGGCGCCGGTGCCGCAGTCCGGGGCGGCGGCGGCGGCGCCGAGGCCCACGCCGTTCGGGCGCACCATG
TCCACGGTCATCACCGTGGCCATCAGCGTCTTCTTCTTCCTGCTCTTCTTCTGCGCCTACATCAACCAGTGCCGCCTCGC
CGAGA---ACGCCGCGCCGCAGGGGGCCAACGCCGCCGCGGCCGGGGCCGGTGCGTCCAGGAGGGGGAAGCGCGGGCTGG
ACCCGGCGCTGGTGGCCACGTTCCCGATCATGCAGTACAGGGAGATCAAGGAGCACAAGATCGGCAGGGGCGTGCTGGAG
TGCGCCGTGTGCCTCACGGCGTTCGAGGAGGCCGACGACCTCCGGCTGCTGCCGCACTGCTCGCACGCCTTCCACCCGGA
GTGCATCGACCCCTGGCTCGAGGCGCGGATCACGTGCCCGCTGTGCCGCGCCAACCTCGAGAAGCCGCCGCCGCCGCCGC
AGCCGTCCGCCGTGGCGCCCCCGTCGCCCGAGCAGGCGGCGCTGCATCAGCCCTCGCCTTCGCCGTCCCCGCCGCACGCC
GTGGCGATACCGGTGCGGGAGGATG---AGGAGGA---CAGCGACGAGGACGACAGGAAGGAGGAGGCGATGGAGCTGGA
GATGCTGCGCAGCGAGCGGCGGGCGGCGAGGCTGCCGAGATCGCACTCGACGGGGCACTCGCTGTTCGCGGCGTCGGCGG
CCGCCGCCGAGCGGAGCGACCACGAGAGGTTCACGCTGCGGCTGCCGCACCACGTGAGGGAGCAGGTGCTCAGGTCGCGC
CGCCTGCGCCACGCCACCAGCCTGATCGACCTCGCCGGAGCGAGCCCCGAGGGGAGCGTGCGCGGAGGCCGGCCCGCGGG
CGGAGGAGGCGGCGGC------AGCAGCCACGGCGGGCGGCGGTGGCAGGCGTTCCTGGCGAGGACGATGTCGTGGGCCC
GAGGGGGAGGCGACGGGTCGGTGCGCAAGGGGTGGGACGGGTCCACCCGGAGGGGAAGGGACGACGCCGAGTCGAGCAGA
AAGGGGGCCGCTTCGCCGGCGG------CGGCGCGGCCATGACGACGTCGGCAGTCCACACCGCCACCGGAACTGCAGTG
CAGAGCTTGACTGTAG-AAAATGCTTGTAATTTGCCTT------TTTTTTAGTTGATTGATGGTATGGATAAATTTAATT
TTTCGTGTTTTTAGCTACAG-TAGG-ATTGTTTGCGTGTGCTCTTGTGAGGCCTGAACTTTTCTCGTTTCATTTGACTCT
CGCGAAGTGAACTTTTTG--TCGATCCGCGGATTCCTCCATCCGATAAAAAGCTTTGGCGAGGGAGAAGAATCGGAATGT
TCACTTTTGGACTTGTGCACCCGCCT------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----TTTCGCTTACAGATGAGATGACAGCCTTCCCTTTTGTCAAGAGATCAATTTTTGTTTAGTACAG---------TAA
TACAACTTTGGTTAAGAGACGATGTTAGTGGGAGGA------GCATTTGCAAATCTCATTCTCGTGGCTGGCG-------
AGGTGCGAGCGTGAGGCGTAAGGCAGAGCAAATTGCAATTGCGCCGCTGGTGATGGATACCTCTTTAATCATTCCCGGCT
TGTCCATCGTTCTTTGCGAGATTCCTGTTTTGATTGGGCGTCGGTCGATCTTCCCTTTTTCTTTTCT------TTTCCAC
TCCACTGTCTCCCTCATGGTCAATTTAGTAGTACTCCTA-TATGAATTGGAAGGAGGGTTCATTCATGTGTAGAACAACC
TGGGGGAGGCTCTTGTGCTTAAGAAATCAGCGGATAAGTTTCGC----CATACAAAAATATATACACATGAGCGGATAAG
AACGTGGCGTGGTTACCACGGGCACCGCTGCGTCCTGACCTGCGTGGTGGCGGTGCTA----TAGTAGGAGTAGTGTCTA
GCAGTAGCGCATCGATCATCTATCCGAGACGAGTGAGGGAGCCGTGTGTCATGGCGCGGTGCCT---------TGGAAGA
CG------CAAGGCGAAGCTGGCAACAGAAACGCACCACACGAGAAGC-AACTAGATCGTCATGCATTGCTCGTGAAGAA
CAGGGCGTATATCCGTACGTCTGCTAGTTCATGCCAAGATCCAG
>chr2D_1
GTACGAGAATAATGGACTCTGGAACAGTTTATGCTTTATTTTGGCAAATACAATCTGACTATATTGTCAGGTCCAGCGCC
GCATTATCGAAAGAACTATATTTTCAGGTCCAGCGTAACTAAGAGCATGCATGATTTTGCCACATGTGTGGCAGCGGTGT
ATGT-TTATTGGTTGCTCCGCTGCCATAACCGAGCCATGTCACA--TTTGTACTCC------------------------
------TAGTAGCAGTTTGGCAGTTTTGCAAGCTTTGCTAAGCTGCGG--------------------------------
--------------------------------------------------------------------------------
----------------------CG-ACATTTTCTCGTGACGTGCCACGGTTCAACAGGAAAGGTGTGACGAAGTTGAGCA
AGGAACGAACGTGCCTCAGGTGCCAACTACCCAGGTACTGTACGGCTAAATCTGAAGTTGGTAACTGACCGCACCCGTG-
TCATCCTGTGGCGCTCACGATCTGAGTGGCATATGATCGGTACAACTGCTCCACCCGGGGTAGGC---GACATCACCTGA
TCGATCACACTTCAGCATGTTGTTCTC-ACGCTCCGCATCGTCGG-----------------------------------
--------------------------------------------------------------------------------
-------------------------------------CCAGGTGTTGCATGCACCGGCGAGACATGAT----T-GTCCAT
GCCATATGAAAAACCAGTCGCGATCTAGATGAGCTTGTTTAAGGATTTCTTGGCGTCATTGGGCAATCCTCAGCTACCAC
ACCCACCATTTTCCAAAAAACTGGAATGATACGTAC--TGTATTCTACAATTATGGCAAATTGTATGACATTTACGGTCG
ACACGATTATTAATAATCGCATCGCATTCAGTGT-----GATGGCAAAATCAGTAGTCAAAGCAGATCAATCTAGATGTA
GAAACGTGAAGGGGGGCC------TGTGGTGCATACAAGAGCAAAAGGCAAGTGTCCACTCGTCAGAAAATTTCTGCCCA
AGAAAGAAAGA----AAAGGTAGGTGCGAATTTCCCTCGGGATTTTAGGCGCCGCCGCCGCCGCTAACGTAGCCGCACGC
CACACCGCCAGGCTCCAGCTGAG--------CTCTCTCTCTTGTAGAGCAGACCACCGCCTCACCTGCCAATTCTATGGT
TGCGGTGATGGAGGTGCGTCCACACCTCCTCCTTGTCCTTCTTTGCCTCCTTGGCGCCGGCGCCGGCGCGGGGATGGCGC
AGTCTTTGCCGCCGGCGCCGGTGCCGCAGTCCGGGGT---GGCGGCGGCGCCGAGGCCCACGCCGTTCGGGCGCACCATG
TCGACGGTCATCACCGTCGCCATCAGCGTCTTCTTCTTCCTGCTCTTCTTCTGCGCCTACATCAACCAGTGCCGCCTCGC
CGAGA---ACGCCGCGCCGCAGGGGGCCAACGCCGCCGCGGCCGGGGCCGGGGCGTCCAGGAGGGGGAAGCGCGGGCTGG
ACCCGGCGGTGGTGGCCACGTTCCCGATCATGCAGTACAGGGAGATCAAGGAGCACAAGATCGGCAGGGGCGTGCTGGAG
TGCGCCGTGTGCCTCACGGCGTTCGAGGAGGCCGACGACCTCCGGCTGCTGCCGCACTGCTCGCACGCCTTCCACCCCGA
GTGCATCGACCCCTGGCTCGAGGCGCGGATCACGTGCCCGCTGTGCCGCGCCAACCTCGAGAAGCCGCCGCCGCC-----
-------CGCCGTGGCGCCCCCGTCGCCCGAGCAGGTGGCGCGGCATCAGCCCTCGCCATCGCCGTCGCCGCCGCACGCC
GTGGCGATACCGGTGCGGGAAGAGG---AGGAGGAGGAGAGCGACGAGGACGACAGGAAGGAGGAGGCGATGGAGCTGGA
GATGCTGCGCAGCGAGCGGCGGGCGGCGAGGCTGCCGAGATCGCACTCGACGGGGCACTCGCTCTTCGCGGCGTCTGCCG
CCGCCGCCGAGCGGAGCGACCACGAGAGGTTCACGCTGCGGCTGCCGCACCACGTGAGGGAGCAGGTGCTGAGGTCGCGC
CGCCTGCGCCACGCCACCAGCCTGATCGACTTCGCCGGAGCGAGCCCCGAGGGGAGCGTGCGCGGAGGCCGGCCCGCGG-
-----------GCGGC------AGCAGACACGGCGGGCGGCGGTGGCAGGCGTTCCTGGCGAGGACGATGTCGTGGGCCC
GAGGGGGAGGCGACGGGTCGGTGCGGAAGGGGTGGGACGGGTCCACTCGGAGGGGAAGGGACGACGCCGAGTCGAGCAGA
AAGGGGGCCGCTTCGCCGGCGG------CGGCGCGGCCATGATGAAC-------TCCACACCGCCACCGGAACTGCAGTG
CAGAGCTTGACTGTA-AAAAATGCGTGTAATTTGATTTGCTTAATTTTTTAGTTGAGA-----TATGGATAAATTTAATT
TTTCGTGTTTTTAGCTAGGAATATG-AATGTTTGCGTGTGCTCTCGTGAGGCTGAAGTTTTTTCTCGTTTCTTTGACTCT
GGCGAAGTGAAACGTTTTGTTCGATGTGTGGATTCCTCCATAGGATAAAAAGCTTTGGCGAGGGGCAAGAATCGGAATGT
TCACTTTTGGACTTTGTTCGCCGGCCTTTTAGTTGAAAAAGAATTCTATGAGACCAGGTCTCACGCGACACCCATACTGA
TGGATAACACGTGGCATTCACAAAGCACACTTGACCCACCCCCCATTTAAAATCAGGGAGAGAGAGATTAGATGCTTTGT
GATTTATAAATGCCACGTGTCATTCATCAGAGCGGGCCTCACCTGCTAACCATGAGACCTGGTCTTATATAATTTTTTTC
CTCGTTTCGCTTACAGATGAGATGACAGCCTCCCCTTTTGTCAAGAGATCAATTTTTGTTTAGTATGAC-----TAATAA
TACAACTTTGGTTAAGAGACGGTGTTAGTGGGAGGAGCATTTGCATTTGCAAATCTCATTCTCGTGGCCGGCG-------
AGGTGCAAGCGTGAGCCGTAAGGCAGAGCAGATTGCGCCGCTGGTG-TGGTGATGGATGCCTCTTTAATCATTCCCGGTT
TGTCCATCGTTCTTTGCGAGATTCCTGTTTTGGTTGGGCGTCGGTCGATCTTCCCTTTTTCTTCTTT------TTTCCAC
TCCACTGTCTCCCTCATGGTCAATTTATTAGTAGTACTCCTGTGAATTGGAAGGAGGATTCATTCATGTGTAAAACAACT
TGGGGGAGGCTCTTGTGCTTAAGAAATCAGCGGATAGGTTTGGCAGTACTG--AAAAAAATAT----ATGAGCGGATAAG
AACGTGGCGTGGTTACCACGGGCACCGCCGCGTCCTGACCTGCGTACCGGCTGCGTCTGTGCTAGTAGTAGGAGGATCTA
GCA---------------------------GAGGGACCGAGCCGTGTGTTGTGGTCGTGGAGCGGTGCCGTGGTGGAAGA
CC------CAAGGCGAAGGCGGCAACGGAAACGCACCACACGAGAAGC-AACTAGATC---ATGCATTGCTCGTGAAGAA
CAGGGTGTAT----------------------------------
>chr2A_1
GTACGAGAATAATGGACTCTAGAACAGTTTATGCTTTATTTTGGCAAATGCAATCTGACTATATTATCAGGTCCAGCGAC
GCATTATGGAAAGAAATATATTTTCAGGTCCAGTGTAACTAAGAGCATGCAGGATTCTGCCACATGTAT-GCAGCGGTGT
ATGC------------------------------------CACGATTTTGTAGCAGCAGCTAGGCAGTTCTGCAAGCTTT
GCTTTGTAGCAGCAGCTAGGCAGTTCTGCAAGCTTTGCTAAGCTGCGTCGTGGCCGTAGCACTCCCCGTACTGCAGTATG
GTTACATTCGGGATTAGATTTTGTTATAAACTTGGCATTGGCTAAGAAGCCTCCGTGAGTAATGAGAATCTCCTTTTCAC
CCGCAAAAAAAAAGAGCTGCGTCGAACATTTTCTCGTGACGTGCCACGGTTCAACCGAAAAGGTGTGACGAAGTTCAGCA
AGGAATAAACATGCCCCAGATACCAACTACCCAGGTACTGTACGGCTAAAGCTGAAGTTGGTAACTGACCGCACCCGTG-
TCATCCTGTGGCGCTCACGATCTGAGTGGCATATGATCGGTACAACTGCTCCACCGGGCAGGCGACATGACATCACCTGC
TCGATCACACTTGAGCATGTTGTTCTCCATGCTCCACACCGTTGGTCCAGGAGGGAAATATCTGGTGCACCGGAGCTTGT
GGTGCTACCGGTGTACCGGACTCATATTGTGCTTTTAAAATATTCAAAAAATATTCTATGACATCCTGTGCACCGGTAGC
ATCACAAGTGCGGGTGCACCAGATACATTCCTTTAGTCCAGGTGTAGCATGCACCGGCAAGACATGAT----TTGCCCAT
GTCATATG-AAAACCAGTCGCGATCTAGACGAGCTTGTCTAAGGATTTCTCGGCGTCATTGGGCAATCCTCAGCTACCAC
ACCCACCATTTTCTAAAAAACTGGAATGATGCTGTATGTGTATTCTACAATTATGGCAAATTGTATGACATTTACGGTCG
GCACGATTATTAATAATCGCATCGCATTCAGTGTAGTGTGATGGCAAAATCAGTAGTCAAAGCAGATCAATCTAGATGTA
GAAACGTGAAGGGAGGGCCTGTGGTGTGGTGCATACAAGAGCAAAAGGCAAGCGTCCACTCGTCAGAAAATTTCTGCCCA
AGAAAGAAAGG----AAAGGAAGGTGCGAATTTCCCTCGGGATTTTAGGCGCCGCCGCCGCCGCTAACGTAGCGGCACAC
CACACCGCCAGCCTCCAGCTGAGCTCTCTCTCTCTCTCTCTTGTAGAGCAGACCACCGCCTCAGCTGACAATTCTATGGT
TGCGGCGATGGAGGTGCGTCCACACCTCCTCCTCGTCCTTCTCTGCCTCCTCGGCGCCGGCGCCGGATCATGCGTGGCGC
AGACTTTGCCGCCGGCGCCGGTGCCGCAGTCCGG---GGCGGCGGCGGCGCCGAGGCCCACGCCGTTCGGGCGCACCATG
TCCACGGTCATCACCGTCGCCATCAGCGTCTTCTTCTTCCTGCTCTTCTTCTGCGCCTACATCAACCAGTGCCGCCTCGC
CGAGA---ACGCCGCGCCGCAGGGGGCGGCGGCCGCCGCGGCCGGGGCCGGGGCGTCCAGGCGGGGGAAGCGCGGGCTGG
ACCCGGCGGTGGTGGCCACGTTCCCGATCATGCAGTACAGGGAGATCAAGGAGCACAAGATCGGCAGGGGTGTGCTGGAG
TGCGCCGTGTGCCTCACGGCGTTCGAGGAGGCCGACGACCTCCGGCTGCTGCCGCACTGCTCGCACGCCTTCCACCCCGA
GTGCATCGACCCCTGGCTCGAGGCGCGGATCACGTGCCCGCTCTGCCGCGCCAACCTCGAGAAGCCGCCGCCGCCGCCGC
AGCCGTCCGCCGTGGCGCCCCCGTCGCCCGAGCAGGTGGCGCGGCGTCAGCCCTCGCCTTCGCCGTCCCCGCCGCACGCC
GTGGCGATACCGGTTCGG---GAGG---AGGAGGAGGAGAGCGACGAGGATGACCGGAAGGAGGAGGCGATGGAGCTGGA
GATGCTGCGCAGCGAGCGGCGGGCGGCGAGGCTGCCGAGGTCGCACTCGACGGGCCATTCGCTCTTCGCGGCGTCGGCCG
CCGCCGCGGAGCGGAGCGACCACGAGAGGTTCACGCTGCGGCTGCCGCACCACGTGAGGGAGCAGGTGCTGAGGTCGCGC
CGCCTGCGCCACGCCACCAGCCTGATCGACTTCGCCGGAGCGAGTCCCGAGGGGAGCGTGCGCGGAGGCCGGCCCGCGG-
-----------GCGGCGGCGGCAGCAGCCACGGCGGGCGGCGGTGGCAGGCGTTCCTGGCGAGGACGATGTCGTGGGCCC
GAGGGGGAGGCGACGGGTCGGTGCGGAAGGGGTGGGACGGGTCCACCCGGCGGGGAAGGGACGACGCCGAGTCGAGCAGA
AAGGGGGCCGCTTCGCCGGCGCCGGCGCCGGCGCGGCCATGATGAAC-------TCCACACCGCCACCGGAACTGCAGTG
CAGAGCTTGACTGTAGAAAAATGCGTGTAGTTTGGATT------TGTTTAG-----TTGATGGTATGGATAAATTTAATT
TTTCACCTTTTTAGTAGCCATAGGAAAATATTTGCGTGTGCTCCTGTGAGGCCTGATG-TTTCTCGTTTCCTTTGACTCT
GGCGAAGTGAAACTTTTGGTTCGGTCTGTGGATTCCTCCATCCGATAAAAAGCTTTGGCGAGGGAGAAGAATCGGAATGT
TCACTTTTGGACTTGTGCGCCCGCCT------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----TTTCGCTTACGGATGAGATGACAGCCTCCCCTTTCGTCAAGAGATCAATTTTTGTTTAGTAGAGTAATAATAATAA
TACAACTTTGGTTAAGAGACGGTGTTAGTGGGAGGAGCATTTGCATTTGCAAATCCCATTCTCGTGGCCGGCGAGGGGCG
AGGGGCGAGCGTGAGGCGTAAGGCAGAGCAGATTGCGCCGCTGGTG-TGGTGATGGATGCCTCTTTAATCATTCCCGGTT
TGTCCATCGTTCTTTGCGAGATTCCCGTTTTGGCTGGGCGTCGGTCGATCTTCCCCTTTTCTTTTCTTCTCCATTTCCAC
TCCACTGTCTCCCTCACGGTCAATTTA------GTACGCCTATGAATTGGAAGTGAGATTCATTCATGTGTGGAACAACT
TGGGGGAGGCTCTTGTGCTTAAGAAATCAGCGGATAAGTTTCGCGATACATACAAAAAAATAT----GTGAGCGGATAAG
AACGTGGCGTGGTTGCCACGGGCACCGCCGAGTCCTGGCCTGCGTAGCGGCTGCGTCTGTGCTAGTGGTAGGAGGATCTA
GCA---------------------------GAGGGACCGAGCCGTGTGTCATGGTCGTGGCCCGGTGCCGTGGTGGAAGA
CCCAAGGCCAAGGCCAAGGCGGCAACAGAAACGCACCACACGAGAAGCAAACTAGATC---ATGCATTGCTCGTGAAGAA
CGGGGTGTATGT--GTACGTCTGCTACTCCATGCCAA-------
>chr3A_1165
--------------------------------------------------------------------------------
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--CACGGTGGTCGCCGTGGCCATCGGCGTTCTCTTCCTCCTGCTCTTCTTTTGCGCGTACGTCACCCAGTGCCGCCTCGT
CGAGGACCACGGCGCGCCGCAGGAGGGTAGCGTCGCGCC------GGGCGGGGTGTCCAGGCGGGGAAAGCGCGGGCTGG
ACCCGGCGGTGGTGGCGACGTTCCCGATCGTGCCGTACAGGGAGATCAAGGAGCACAAGATCGGCAGTGGCGCGCTGGAG
TGCGCCGTGTGCCTGACGGAGTTCGAGGACGCCGACGACCTCCGGCTGCTGCCGCACTGCTCGCACGCGTTCCACCCGGA
TTGCATCGACCCGTGGCTCCAGACGCGGACCACGTGCCCGCTGTGCCGCGCCAACCTCGAGAAGCCACCGCCACCGGCTG
CCGCC---------------------------------------------CCAGCGCCCTCCTCGCCGCCGCATGCCGTC
GTGGCGATGCCGGTGCAGCAGGGTGAGCAGAAGGAGGACAGTGACAAGGACGACCGGAAGGAGGAGGCCGCAGAGCTGGA
GAAGCTGCGCAGGGAGCGCCGGGCGGCGAGGCTGCTGAGGTCGCACTCGACGGGGCACTCGGCGGAGCAGTGCGACTGCG
AG---------------GACCACGAGAGGTTCACGCTGCGGCTGCCGCAGCACGTGAGGGAGGAGGTGCTCAG-------
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--------------------------------------------
>chr3D_1165
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--CACGGTGGTCGCCGTGGCCGTCGGCGTTCTCTTCCTCCTGCTCTTCTTGTGCGCGTACATCACCCAGTGCCGGCTCGT
CGAGGACCACGACGAGCCGCAAGGGGGGAGCGTCGCGCC------GGGCGGTGTGTCCAGGCGGGGGAAGCGCGGGCTGG
ACCCGGCGGTGGTGGCGACGTTCCCGATCGTGCCGTACAGGGAGATCAAGGAGCACAAGATCGGCAGCGGCGCGCTGGAG
TGCGCCGTGTGCCTGACGGAGTTCGAGGACGCCGACGACCTCCGGCTGCTGCCGCACTGCTCGCACGCGTTCCACCCGGA
CTGCATCGACCCGTGGCTGGAGACGCGGACCACGTGCCCTCTGTGCCGCGCCAACCTCGAGAAGCCACCGCCACCGGCTG
CCGCC---------------------------------------------CCAGCGCACTCCTCGCCGCCGCATGCCGTC
GTGGCGATGCCGGTGCAGCAGGATGAGCCGAAGGAGGACAGTGACAAGGACGACCGTAAGGAGGAGGCCGCAGAGCTGGA
GAAGCTGCGCAGGGAGCGCCGGGCGGCGAGGCTGCTGAGGTCGCACTCGACGGGGCACTCGGCGGGGCAGTGCGACTGCG
AG---------------GACCACGAGAGGTTCACGCTGCGGCTGCCGGAGCAGGTGAGGGAGGAGGTGCTCAG-------
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--------------------------------------------
>SNPs
-------------------S---------------------------------------S-------------S------
---S-------------------------------------------S--------------------------------
----S------------S----------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
------------------------------S-------------------------------------SS---------S
-----------S--------SS----------------S---------------SS------------------S-----
---S--------------S--------------------SS---------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S------SS-SSSSS--------
-------------------S----------------------------------------------S-------------
------S------------------S--------S---------------------------------------------
---SS-S-------------------------------------------------------------------------
----------------------------S-S-------------------------------------------------
-----------SSSS----------------------------------------------------------S------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-----S-------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
------------------------------S------------------------------------------------S
SSSSSSSSSSS---------------------------------------------------------------------
-------------------------S------------------------------------------------------
------------------------------------------S--SSSSSSSSS--------------------------
------------------------S---------SS--------------------------------------------
------------------SS-------S----------------------------SS------------S---------
S----------SS-------------S-S---------------------------------------------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S---------------------------------S--------------
---------------------S----------------------------------------------S-----------
------------------------------S-----SSSSSS-SS-S-----------S-------------------S-
--------------------------------S-----------------------------------------------
---------------------------S-----S-S--S------------------S---------------------S
----------------------------------------------------------S----SSSS-------------
----------------------------S----------------S-S---S-S-SSS----------S--S--SS----
---SSSSSSSSSSSSSSSSSSSSSSSSSSS---S--SS----------------SSSS-SS--S----------------
-S----------------SS--------------------------------------SSS-------------------
-----S----S-SS------------S-S--------SSSSSSS
>forward_435
--------------------------------------------------------------------------------
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---------------GCTGCGGCGAACATTTTCTT---------------------------------------------
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--------------------------------------------
>reverse_1430
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---------------------------------------------------------------------CGGGATGGCGC
AGTCTTT-------------------------------------------------------------------------
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--------------------------------------------
>forward_869
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-------------------------------------------------TGCACCGGTGAGACAATACA-----------
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--------------------------------------------
>reverse_2668
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---------------------------TTGTTTGCGTGTGCTCTTGT---------------------------------
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--------------------------------------------
