>input_sequence_59472
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--------------------------------------------------------ATGCGGCGGCGGTTCATCAATCTG
GTGATGAAGGATTACGCCGTCGACGGCTCCTACTGGCTGAGCCGCATGAGGCCCCAGGAAAACCTCTTCTACGCCTCCAC
GGCGGAAGCCATGACGGCGCAGGCGCAGCAGGCCAGGAAGGACAAGATCAATGCGATGCTGCCGTTCGGGAGCACCCTGA
AGCTGCCCCCGCCGGCGGCCAGATTCAAGTCATCCTGCACGGACTGCCTGACGCTCGACTTCATGCCTTTCTACGGGCGA
GACAGCCCCAGCGAGGGCAGGATCGTCGCGCTCGACTCGACCGGGCACACCGTCCTCTACGACGCCGACGCCGACCCTT-
-----------GCTCTGTCGAG----------------------------------------------------------
--------------------GCGCTGCCCCGCGTTAACTCGTCTAACTGGCGAACTCCCATCTCCCTGTACGTCACCGGC
GCCAACGCCAACGCGGCAGCTCGGGACTCCGGCGGCTCCGACGTGCTCTACGGCATCAACATGTTCAATTCGAGCGACTT
CGAGGTACTCGTTCACTGCAACCCCTCTGACTCTAAGTTTGGGAGGATCGATGGAGCTAAAGCTTGGCACTGGCTCAAGC
TCCCGTCGGCGCCCTACCTTGATAATCCTGGTCAGGATCA---CACCATCCATTCCTACACGCTGCTCGAGGACGGCAAA
ACCATCTGCTTCTCCTCACTTCCTGACAATGG---CTTTGGCACCTACTGCTTCGACACATCCGGCCATGAGTGGACCAA
GGCCGGCCGCTGGGCGCTGCCCTTCATCGGCCGTGCCTGGCACGTCCCTGAGCTCGGCAACCTCTGGTTCGGCTTCAGCG
GCAGCAACCCAAACAACATCTGTGCTATTGACCTCTGCTCTCTCGACGGTCCTCCCAAGGTGCTGCACGAGTGGCGAGGC
TCCAACACTCCCAGGAACTGGATGCTGGTTAA-CAGCACCATGGTTTACCTCGGGGGCAACAGGTTTTGCGTCGTCAGGT
TCTTCGGCGTTTACAATGGACCCCCGGACAGGAACGATGAGCCGA---CTGACACGGTTTCTATCATCACCGGTCTGGAG
ATTGTCAAGGGACAAACGAGTGAAACCGTGCTGCGGATGGTCAAGCACAAGAGCAGAACTTACGTCTTCGAAGGCTGTGG
CATTGAGTGTGTGTTCTAA-------------------------------------------------------------
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>chr2A_1_TraesCS2A01G141000
TCTCATTACTACACTCGTTATCGCACGAAGTTTTTGTGAAACTGGCAGTAACACTTTGGGCAACGTGAACAGCGAGGAGA
AAGGCAATTCACGAAGGCATCTT-CTAGAGCCCTCACGCGACACACACATTCATCAACCGCTACCTGGTTGAGCTGG-AA
ATAGTTAAGGAGAACCAGCATGTAACGTCGAGAAGAGCAATACCCCGGACAGCAACAACGGACAGTGCAAGGCCAAAGGC
TCCGCCGGCCGGATTCATCAAAATCCATGTCGATGCAGGGGTATCTAAACGCCATGGAAGAGGGGCGGCAGTGGCTGTAT
GCCGCGATGACTGGGGAAACTACTTGGGAAGCTCAGCATTGGTGGTTGAAGGAATGCAGGATGCGGCGATTCTTGAATGT
ATGGCATGCAGAGAAGCTTTAGCACTAGCTGAGGATTTATCAGTTCAGAATCTGATCGTGGCGTCAGACGCAAAACGAGT
GGTGCAAGCTATATCTAGCAACAGCAGGGGTCCTTATGGCATGGTTATCTCAGAAATCAAGTCTAAAATTTTGAGTTTGA
ACTGTCAGATAGTTTTTGAAGGGCGCCGGTTTAACGGAGATGCTCATAGTTTAGCTAAATTTTCGCTTTCCTTAGCTCGG
GG-CGCCACCTGTGGCTTACTAACCCCCATAACCCTTTTTGTATCCTACAAACTGTGGTTTTCGATGAATGAATAAAGTC
CTTCATCCCTAAAAAAAAAACCACCCCTAAA----AAAACACTTACCGCCGCCGCCTCCCTCTCGCCTTCCCCTTCCCTC
CCGAATCCTCTCTTGCATCTTCAGCGAATCCAGCTTCCACCCCCGGTCGTCCTGACTGCCAGAGGTAAGCTTCGATCCCA
CATGCTCGTCTGCCGTATGTA--AATTTGTGGATTGG---AGTGGAAGGGGCTTCTACGATTCATCTTTTGTGTTAAAAA
ATTCTGATCTTGTGTTCTGTTTTCTTTTGTGT----GATTTGGAAGGAAGGACAAGATGCGGCGGCGGTTCATCAATCTG
GTGATGAAGGATTACGCCGTCGACGGCTCCTACTGGCTGAGCCGCATGAGGCCCCAGGAAAACCTCTTCTACGCCTCCAC
GGCGGAAGCCATGACGGCGCAGGCGCAGCAGGCCAGGAAGGACAAGATCAATGCGATGCTGCCGTTCGGGAGCACCCTGA
AGCTGCCCCCGCCGGCGGCCAGATTCAAGTCATCCTGCACGGACTGCCTGACGCTCGACTTCATGCCTTTCTACGGGCGA
GACAGCCCCAGCGAGGGCAGGATCGTCGCGCTCGACTCGACCGGGCACACCGTCCTCTACGACGCCGACGCCGACCCTT-
-----------GCTCTGTCGAG----------------------------------------------------------
--------------------GCGCTGCCCCGCGTTAACTCGTCTAACTGGCGAACTCCCATCTCCCTGTACGTCACCGGC
GCCAACGCCAACGCGGCAGCTCGGGACTCCGGCGGCTCCGACGTGCTCTACGGCATCAACATGTTCAATTCGAGCGACTT
CGAGGTACTCGTTCACTGCAACCCCTCTGACTCTAAGTTTGGGAGGATCGATGGAGCTAAAGCTTGGCACTGGCTCAAGC
TCCCGTCGGCGCCCTACCTTGATAATCCTGGTCAGGATCA---CACCATCCATTCCTACACGCTGCTCGAGGACGGCAAA
ACCATCTGCTTCTCCTCACTTCCTGACAATGG---CTTTGGCACCTACTGCTTCGACACATCCGGCCATGAGTGGACCAA
GGCCGGCCGCTGGGCGCTGCCCTTCATCGGCCGTGCCTGGCACGTCCCTGAGCTCGGCAACCTCTGGTTCGGCTTCAGCG
GCAGCAACCCAAACAACATCTGTGCTATTGACCTCTGCTCTCTCGACGGTCCTCCCAAGGTGCTGCACGAGTGGCGAGGC
TCCAACACTCCCAGGAACTGGATGCTGGTTAA-CAGCACCATGGTTTACCTCGGGGGCAACAGGTTTTGCGTCGTCAGGT
TCTTCGGCGTTTACAATGGACCCCCGGACAGGAACGATGAGCCGA---CTGACACGGTTTCTATCATCACCGGTCTGGAG
ATTGTCAAGGGACAAACGAGTGAAACCGTGCTGCGGATGGTCAAGCACAAGAGCAGAACTTACGTCTTCGAAGGCTGTGG
CATTGAGTGTGTGTTCTAATTAACTCTTGCGTCCTTCGTTCGGTTTCAACACTCTAGTTGGTTACAGTGGTTTCAACTGT
TCTGTCCACCATGTATCATTGTGTCTTAGTTAACTATTATGTTTGTTAGGAAGAAAGTAATTAGTTTGAGTATGGCCTGT
AGTCCATAACTAGTTTTGCCTCTGGCCAGATTGAACTGACCCTAATTATCTTTCCCATCGAGGATTCAGCTTGCAAGCAT
CCTAATCTTATGCTGTCCTAATCACTCAGTATTCATTGCTTATTAGAAGCTGCTGAGGCTTCCCCGCAAAAAAAAAAAAG
AAGCTGCTGAGGCTCTCCAAAATTTAGGTGCTGACTTTTGTTAGTCTGCTCCTTCTGTCCAGAAGTTCTGAATCCAATCT
TCATGCACAGCGCTGGAGATGCCTTGCCTTGCTCTTGTGTTTTGCTTTTCAAATTCTTATTCTTAGAGGCTTGGATTTGA
T-----------------CCTGTGGACCCACGATTCGCTCGAAAATCAAAACGCCCTGCTTTCTGGCTGGTACGATATCT
GCAGTTTTTCAAAGGGACTCTACTTGCGGCGGGGGACGAACGCTTATCCGAGACGGCGACAGACTCTCGTTCTTGTCGA-
TCGATATAAATAAACTCGCACGTGAACGTGCAAAGTCCAAAACCACGGAGCCGCACAAGCACGCACATCCCGCTGGCAGA
AATCACAGATTTGACCTCAGGCAGAAATCAAATCACAAACTGACCTGTTCACGAAAAAATTTCACTCTGCTGACTCTTTG
GTGTGGCGCCCGACAGCTGGGCGCCGCACCCTACTATGCAGCGCCTCTCCCTTAGGCGTCGCACATCCTGCCAGCGTGGC
AGCCCTAGTCCAGTTGCAGCCCCACACGCACCTGTGCAGCGCCTAAGGGCTAGGCGCCACACACCTGTAATGTGCAGCGC
CTAGCTCTTGGGCGCTACACAGTGACTTAAGCGCGGCCGCCCCAGCCCGACCAGGCAGTTCTTCGTCTCTCCGCTCT
>chr6D_1
TCTCATTACTACGCTCGTCATCGCATGAAGTCTGTGTGAAACTGGCAGTGACACTTTGGGCAACGTGGACAGCAAGGAAA
AAGGAAATTCACAAAGGCATCTT-CCAGAGCCCTCACGCGCAACACAGATTCATCAACCGCCACCTGGTTGAGCTGG-AA
ATAGTTAAGGAGAACCAGCATGCAACGTCGAGAAGAGCGATACCCAGGACGGCAGCAACGGGCAGTGCAAGGCCAAATGC
TTCGCCGGCAAGATTTGTCAAAATCCATGTCGATGCGGGGGTATCTAAACACCATGGAAGAGGGGCGGTAGTGGCTGTCT
GCCGCGATGACCGGGGAAACTATTTGGGAAGCTCAACATTGGTGGTCGAAGGAATGCAGGACGCGGCGATCCTTGAATGT
ATGGCGTGCAGAG-AGCTTTAGCACTTGCTGAGGATTTATTAGTTCAGAATCTGATCATGGCGTCGGACGCAAAACAAGT
GGTGCAAGATATATCTAGCAACAGCCGGGGACCTTATGGCATGGTTATCACAGAAATCAAGTCTAAAATTATTAGTTTTA
ATTGTCAGATAGTTATTGAAGGGCGCCGGTCTAACGGAGATGCTCATAGTTTAGCTAAATTTTCGCTTACCTTAGCACGG
GGACGCCACCTGTGGCTTATTAACCCCCATAATCCTCTTTGTATCCCACAAACTGTGGATTTCGATGAATGAATAAAGTT
CTTCATCCCTCAAAAAAA--------------------------------------------------------------
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>chr7B_1
TCTCATTAATACGCTTATTATCGCGTGAAGCTTTTGTGAAATTGGCAATAACACTTTGGGCAACGTGGACAGCGAGGAGA
AAGGCAATCCACGAAGGTATTTT-CCAGAGCCCCCATGCGATCCACGCATTCATAAATCGTTATCTAGTGGAGCTGG-AA
ATAGTAAAGGAGCAACAACATGCAACGCTGAGATCAGCAGCATCCCGTACAACGATAATAGGCAGTGTAAGGCCAAAGGC
TCCGCCGACAGGTTTTGTCAAAATCCATGTCGACGCGGGGGTATCGAAATGCCAGGGAAGAGGGGTGGCAGTGGCTGTGT
GTCGCGATGAATGGAGAAATTACTTGGGAAGCTCGGCACTGATGGTGGAAGGGATGTAGGATGCGGCGATTCTTGAATGC
ATGGCATGCAGGGAAGCTTTAGAACTTGCCGAGGACTTATCAGTTCGGAATTTGATCATGGCATTGGATGCAAAACAAGT
GGTGCAAGATATATCCAGCACTAGTAGGGGTCTTTATGGCATGGCTATCTCA-AAATCAAGTCT-AAATCTGAAGTTTAA
ACTGCAAGATAGTTTTTGAAGGGCGCCGGTCTAACGGAGATGCTCATAGTTTAGCTAAATTTTCCCTTTCTTTAGCTCGG
GGGCGGCACGTGTGGCTTGTTCACCCCCATAATCCTCTTTGTATCCCACAAACCGTGGTTTTCGATGAATGAATAAAGTC
CTTAATCCCTAAAAAAA---------------------------------------------------------------
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>chr3B_1
TCTCATTAATATGCTTATTAT-GCGTGAAGCTTTTGTGAAATTGGCAGTAACACTTTGGGCAACGTGGACAGCGAGGAGA
AAGGAAATCCACGAAGGTATTTTTCCAGAGCCCCCATGCGACCCACGCATTCATCAATCGCTATCTAGCTGAGCTGGAAA
ATAGTCAAGGAGCAACAGAATGCAACGCCGAGATCAGCAGCACCCCGGACAGTAGCAACAGGCAGTGTAAGGCCAAAGGC
TCCACCGGCAGGATTTGTCAAAATCCATGTCGCTGCAGGGGTATATAAACACCATGGAAGAGGGGCGGCCGTGGTTGTGT
GCCGCGACAAACGGGGAAATTACTTGGGAAGCTCAGCATTGTTGGTGGAAGGAATGCAGGATGCGGCGATTCTTGAATGC
ATGGCATGCAGAGAAGCTTTAGCACTTGTCGAGGACTTATCAGTTCAGAACCTGATCATGGCATCGGACGCAAAACAAGT
GGTGCAAGATATATCTACCACTAGCAGGGGTCTTTATGGCATGGTTATCTCTGAAATCAAGTCTAAAGTCTTAAGTTTTA
ACTGCAATATAGTTTTTGAAGGACGCCGGTCTAACGGAGATGCTCATAGTTTAGCTAAATT-------------------
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>chr5A_3
--TCATTAATATGATCATTACCGCATGAAGTCTTTGTAAAACTGGCAGTAACACTTTGGGCAACGTGGACAGCAAGGAGA
AAGGCAATTCACGAAGGCATCTT-CCAGAGTCCTCATGCGACACACGCATTCATCAACCGCTACCTGGTTGATCTGG-AA
ATAGTCAAGGAAAACAACCATGCAACGCCAGTATATGCGACAACCAGAACAGCAGTAAGGGGCAATGTAAGGCCAAAGGC
TCCGCCGGCAGGTTTCGTCAAAATCCACGTCGATGCGGGGGTATCTAAACGCCATGGGAGAGGTGCGGCAGTGGCTGTAT
GCTGTGATGACCGGGGAAACTATATGGGGAGCTCAGCACTGGTGGTTGAAGGAATGCAGGATGCGGCGATTCTTGAATGT
TTGGCATGCAGAGAAGCTTTAGCACTAGCTGAGGATTTATCAGTTCATAATCTGATAGTGGCGTCTGACGCAAGACAAGT
GGTCAAAGATATATCCAGCAACAGTATGGGTCTTTATGGCATGGTGATCTCGGAAATCAAGTCTAAAATCTCGAGTTTTA
ATTGTCAGTTAGTTTTTGAAGGGCGCCGTTCGAACGGAGATGCTCATAGTTTAGCTAAATTTTCGCTTTCCTTAGCTAAG
GGGCGCCACCTGTGGCTTATTAATCCCCATAATCCTCTTTGTATCCCACAAATTGTGGTTTTTGATGAATGAATAAAGTC
TTTCATCCCTCAAAAAAAAA------------------------------------------------------------
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>chr7A_3
--TCATTAATACGATCATTACCGCATGAAGTCTTTGTAAAACTGGCAGTAACACTTTGGGCAACGTGGACAGCAAGGAGA
AAGGCAATTCACGAAGGCATCTT-CCAGAGTCCTCATGCGACACACGCATTCATCAACCGCTACCTGGTTGATCTGG-AA
ATAGTCAAGAAAAACAACCATGCAACGCCAGTATATGCGACAACCAGAAAAGCGGTAAGGGGCAATGTAAGGCCAAAGGC
TCCGCCGGCAGGTTTCGTCAAAATCCACGTCGATGCGGGGGTATCTAAACGCCATGGGAGAGGTGCGGCAGTGGCTGTAT
GCCGTGATGACCGGGGAAACTATTTGGGGAGCTCAGCACTGGTGGTTGAAGGAATGCAAGATGCGGCGATTCTTGAATGT
TTGGCATTCAGAGAAGCTTTAGCACTAGCTGAGGATTTATTAGTTCATAATCTGATAGTGGCGTCTGACGCAAGACAAGT
GGTCAAAGATATATCCAGCAACAGTATGGGTCCTTATGGCATGGTGATCTCGGAAATCAAGTCTAAAATCTCGAGTTTTA
ATTGTCAGTTAGTTTTTGAAGGGCGCCGTTCGAACGGAGATGCTCATAGTTTAGCTAAATTTTCGCTTTCCTTAGCTAAG
GGGCGCCACCTGTGGCTTATTAATCCCCATAATCCTCTTTGTATCCCATAAACTGTGGTTTTCGATGAATGAATAAAGTC
TTTCATCCCTCAAAAAAAAAC-----------------------------------------------------------
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>chr3A_3
--TCATTAATACGATCATTACCGCATGAAGTCTTTGTAAAACTGGCAGTAACACTTTGGGCAACGTGGACAGCAAGGAGA
AAGGCAATTCACGAAGGCATCTT-CCAGAGTCCTCATGCGACTCACGCATTCATCAACCGCTACCTGGTTGATCTGG-AA
ATAGTCAAGGAAAACAACCATGCAACGCCAGTATATGCGACAACCAGAACAGCAGTAAGGGGCAATGTAAGGCCAAAGGC
TCCGCCGGCAGGTTTTGTCAAAATCCACGTCGATGCGGGGGTATCTAAACGCCATGGGAGAGGTGCAGCAATGGCTGTAT
GCCATGATGACCGGGGAAACTATTTGGGGAGCTCAGCACTGGTGGTTGAAGGAATGCAGGATGCGGCAATTCTTGAATGT
TTGGCATGCAGAGAAGCTTTAGCACTAGCTGAGGATTTATCAGTTCATAATCTGATAGTGGCGTCTGACGCAAGACAAGT
GGTCAAAGATATATCCAGCAACAGTATGGGTCCTTATGGCATGGTGATCTCAGAAATCAAGTCTAAAATCTCGAGTTTTA
ATTGTCAGTTAGTTTTTGAAGGGCGTCGTTCGAACGGAGATGCTCATAGTTTAGTTAAATTTTCGCTTTCTTTAGCTAAG
GGGCGCCACCTGTGGCTTATTAATCCCCATAATCCTCTTTGTATCCCACAAACTGTGGTTTTCGATGAATGAATAAAGTC
TTTCATCCCTCAAAAAAAAAACC---------------------------------------------------------
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>chr6D_18
-----------------TTATCGCATGAAGTATTTGTGAAAGTGGCAGTAACACTTTGGGCAACGTGGACAGCAAGGAGA
AAGTCAATTCACGAAGGCATCTT-CCAGAGCCCTCATGCGACACACGCATTCATCAACCGCTACCTGGTTGATCTGG-A-
--------------------TGCAACGTCAGTAAGCGCGATACCCAGAACAACAGCAAGTGGCAATATAAGGCCAAAGGC
TCCGCCGGCAGGATTCGTCAAAATCCATGTCGATGCGGGGGTATCTAAACGCCATGGGAGAGGGGCGGCAGTGGCTGTCT
GCCGCGATGACCAGGGAAACTATTTGGGATGTTCGGCATTGGTGGTTGAAGGAATGCAGGATGCGGCGATTCTTGAATGT
ATGGTATGCAGAGAAGCTTTTGCACTTGCTGAGGATTTATCAGTTCGTAATCTGATAGTGGCGTCTGATGCAAAACAAGT
GGTGCAAGATATATCTAGCAACAGCATGGGCCCGTATGGCATGGTGATCTCAGAAATCAAGTCTAAAATTTTGAGTTTTA
ATTGTCAGATAGTTTTTGAAGGGCGCCGTTCGAACGAAGATGCTCATAGTTTAGCTAAATTTTCGCTTTCCTTAGCTCGG
GGGCGCCACCTGTGGCTTATTAACCCCCATAATCCTCTTTGTATCCCACAAACTGTGGATTTCGATGAATGAATAAAGTC
CTTCATCCCTAAAAAAA---------------------------------------------------------------
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>chr2D_194
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-----------------------------------AGCAGCACCCCGCACATCAATAATAGGCAGTGTATGGCCAAAGGC
TCCGCCGGCAGGTTTTGTTAAAATCCATGTCGACACGGGAGTATCCAAACGCCACGGAAGAGGGGCGGCAGTGGCTGTGT
GTCGCGAAGAACGGGGGAATTACTTAGGAAGCTCAGCGTTGGTGGTTGAAGGGATGTAGGATGCGGCGATTCTCGAATGC
ATGGCATGCAGGGAAGCTTTAGCACTTGCCGAGGATTTATCAGTTCAGAATTTGATCGTGGCATCGGATGCAAAATAAGT
TGTGCAAGACATATCCAGCACTAGTAGGGGTCTTTATGGCATGGTTATATCAGAAATCAAGTCGACAGTCTTGAGTTTAA
ACTGCAACATAGTTTTTGAAGGGAGTCGGTCTAACGGAGATGCTCATAGTTTAGCTAAATTTTTGCTTTTTTTAGCTCGG
GAGCGCCACGTGTGGCTTGTTCACCCCCATAATCCTCTTTGTATCCCACAAACTGTGGTTTTCGATGAATGAATAAAGTC
CTTCATCCCTCAAAAAAA--------------------------------------------------------------
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>chr1D_207
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------------------------------------------------ACAGCAGTAAGGGGCAATGTAAGGCCAAAGGC
TCCGCTGGCAGGATTCGTCAAAATCCACGTCGATGCGGGGGTATCTAAACGACATGGGAGAGGGGCGGCAGTGGCTGTAT
GCCGTGATGACCGGGGAAACTATTTGGGACGTTCAGCATTGGTGGTTGAAGGAATGCAAGATGCGGCGATTCTTGAATGT
TTGGCATGCAGAGAAGCTTTAGCACTTGCCGAGGATTTATCAGTTCATAATCTGATAGTGGCGTCTGACGCAAGACAAGT
GGTCAAAGATATATCCAGCAACAGCATGGGTCCTTATGGCATGGTGATCTCAGAAATCAAGTCTAAAATCTTGAGTTTTA
ATTGTCAGTTAGTTTTCGAAGGGCGCCGTTCGAATGGAGATGCTCATAGTTTAGCTAAATTTCCGCTTTCCTTAGCTAAG
GGGCGCCACCTGTGGCTTATTAACCCCCATAATCCTCTTTGTATCCCACAAACTGTGGTTTTCGATGAATGAATAAAGTC
TTTCATCCCTCAAAAAAA--------------------------------------------------------------
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>chr2D_737
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-------------------ACCACCCCTAAA----AAAACACTTACCGCCGCCGCCTCCCGCTCGCCTTCG-CTTCCCTC
CCGAATCCTCTCTTGTATCTTCAGCGAATCGAGATTC-A-CCCCGGTCGTCCTGACTGTCAGAGGTAAGCTTCGATCCTA
CATGCTCGTCTGCCGTATGTA--AATTTGCGGATTGG---AGTGGAAGGGGCTTCTACGATTCATCTTTTGTGTTAAAAA
ATTCTGATCTTGTGTTCTGTTTTCTTTTGTGT----GATTTGGAAGGAAGGACAAGATGCGGCGGCGGTTCATCAACCCG
GTGATGAAGGATTACGCCGTCGACGGCTCCTACTGGCTCAGCCGCATGAGGCCCCAAGAAAACCTCTTCTACGCGTCCAC
GGTGGAAGCAATGGCGGCGCAGGCGCAG---GCCAGGAAGGATAAACTCAACGCGATGCTGCCGTTCGGGAGCACCCTGG
AGCTGCCCCCGCCGGCGGCCAGATTCAAGTCATCCTGCACGGACTGCCTGACGCTCGACTTCATGCCTTTCTACGGGCGA
GACAGCCCCAGCGAGGGCAGGATCGTCGCGCTCGACTCGACCGGGCACACCGTCCTCTACGACGCCGACGGCGACCCTT-
-----------GCTCCGTCGAG----------------------------------------------------------
--------------------GCGCTGCCCCGCGTCAACTCCTCCAATTGGCGAACTCCCATCTCCCTGTGCGTCACCGGC
GCCGACGCCAACGCAGCCGCCCGGGACTCCGGTCGCTCCGACGTGCTCTACGGCATCAACATGTTCAACTCGGGCGACTT
CGAGGCGCTCGTCCACTGCAACCCC---------------GGGAGGATTGATGGAGCTAAAGCTTGGCACTGGCTCAAGC
TCCCGTCGCCGCCCTACCTTGATAATCCAGGTCTGGATCA---CACCATCCATTCCCACACGCTGCTCGAGGACGGCAAA
ACCATCTGCTTCTCCTCGCGCCGCGACAATGGCGGCTTCGGCACCTACTGCTTCGACACGTCCAGCTACGAGTGGACCAA
GGCCTGCCGCTGGGCGCTGCCCTTCATCGGCCGTGCCTGCCACGTCCCTGAGCTCTGCAACCTCTGGTTCGGCTTCAACA
GCAACAACCCAAACAACATCTGTGCTCTTGAACTCTCTGAGCTTGACAGTCCTCCCAAGGTGCTGCACGAGTGGCGAGGC
TTCAACACTCCCAGGAACTGGATGCTGGTTAA-CAGCACCATGGTTTACCTGGGGGGCAACAGGTTTTGCGTCGTCAGGC
TCTTTGGCGTTTACAATGGACCCCCGGACAGGAACGATGAGCCGA---CTGACACGGTTTCTATCATCACCGGCCTGGAG
ATTGTCAAGGGACAAACAAGTGAAACCGTGCTGCGCATGGTCAAGCACAAGAGCAGAACTTACGTCTTCGAAGGCTGTGG
CATTTAGTGTGTGTTCTAATTAACTCTTGCGTCCTTTGTTCGGTTTCAACACTCTAGTTGGTTACAGTGATTTCAACTGT
TCTGTCCACCATGTATTATTGTGTCTTAGTTAACTATTATGTTTGTTAGGAAGAAAGTAATTAGTTTGAGTATGGCCTGT
AGTCCATAACTAGTTTTGCCTCTGGCCAGATTGAACTGACCCTAATTATCTTTCCCATCGAGGATTCAGCTTGCAAGCAT
CCTAATCTTATGCTGTCCTAATCACTCAGTATTCATTGCTTATTAGAAGCC-----------------------------
-----GCTGAGGCTCTCCAAAATTTAGGTGCTGACTTTTGTTAGTCTGCTCTTTCTGTCCAGAAGTTCTGAATCCAATCT
GCATGCACAGCGCTGGAGATGCCTTGCCTTGCTCTTGTGTTTTGCTTTTCAAATTCTTATTCTTAGAGGCTTGGATTTGA
TCAGTCCGCGTGGGTTCACCTGTGGACCCACGATTCGCTCGAAAATCAAAACGCCCTGCTTTCTGGCTGGTACG--ATCT
GCAGTTTTTCAAAGGGACTCTACTTGCGGCGGGGGACGAACGCTTATCCGAGACGGCGACAGACTCTCGTTCTCGTTCTG
TCGATATAAATAAACTCGCACGTGAACGTCCAAAGTCCGAT-CCACGGAACCCCACAAGCACGCACATCCCGCTG-----
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>chr2B_737
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-------------------ACCACCCCTAAAAAGGAAAAAACTTACCGTCGCCGCCTCCGCCTCGCCTTCC-CTTCCCTC
CCGTATCCTCTCTTGCATCTTCAGCGAATCCAGCTTCGA-CCCCGGTCGTCCTGACTGCCAGTGGTAAGCTTCGATCCCA
CATGCTCATCTGCCGTATGTACAAATTTGTGGATTGATGAAGTGGAAGGGGCTTCTACGATTCATCTTTTGTGTTAAAAA
ATTCTCATCTTGTGTTTCTGTTTTTTGTGTGTGTGTGATTTGGAAGCAAGGAGATGATGCGGTGGCGGTTCATCAACCTG
GTGATGAAGGATTACGCCGTCGACGGCTCGTACTGGCTCAGCCGCATGAGGCCCCAGGAAAACCTCTTCTACGCGTCCTC
GGTGGAAGCAATGACGGCGCAGGCACAG---GCCAGGAAGGATAAGGTCAATGCGATGCTACCGTTCGGGAGCACCCTGG
AGCTGCCCCCGCCGGCGGCCAGGTTCAAGTCATCCTGCACGGACTGCCTGACGCTCGACTTCATGCCTTTCTACGGGCGA
GACAGCCCCGGCGAGGGCAGGATCGCCGCGCTCGACTCGACCGGGCACACCGTCCTCTACGACGCCGACGGCGACCCTT-
-----------GCTCCGTCGAGATGCTGCCCCGCGTAAACTCCTCTAACTGGCGAACTCCCATCTCCCTGTGCGTCACCG
GCGCCAACGCCTCCGTCGAGATGCTGCCCCGCGTAAACTCCTCTAACTGGCGAACTCCCATCTCCCTGTGCGTCACCGGC
GCCAACGCCAACGCAGCCGCCCGGGACTCCGGTCGCTCC-----------------------------------------
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>chr5A_1007
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--------------------------------------------------------------CGGCAGTTCATCAACCTG
GTGATGAAGGACTTCGGCGGCGGCGGCTCGTATTGGCTGAGCCGCATGATGCCCCATGAGAATCTCTTCTACCCCTCGGC
GGCAGAGGCAATCACGGCACACGCGCAG---CCCAAGAAGATGTC------------GCTGCCGTACAGGAGCACCCAGG
AACTCACCCGGCCGGTGGTCAGCTTCAAGTCATCCCGCGAGGCCTGCTTGACGCTCGACTTCATGCCTTTCTACGGACGA
GGCGG---CGGCGAAGGCAAGACCGTCGCGGTCGACTTCGCCGGGCAAGCCGTCCTGTACGACGCCGACGCCGACGGC--
----------GGCTCCATTGAG----------------------------------------------------------
--------------------ATGCTGCCCCGCCTCAACTCCCCCAAGTGGCGGAGTCCCATCTCCCTGTGCGTCACCAAG
GCCAGCGCCGACGG---CGCCCAGGACTCCGGTCGCTCTGCTGCCCTCTACGCGATCAACGGGTCCTACGCAAGCGAGTT
CGAGGCTCTGATCCATTACAACCCATACGG------GCTCGGGAGGTGCGATGTAAACAAGGCCTGGCACTGGCGCAAGC
TCCGGCCGCCGCCCTACCTCGACGATCCGGCCTGCGAAGCCCGCACCATCCAGTCATACGCGCTGCTCGAGGACGGCGAG
ACCATCTGCATCTCTTCAGCGCGCGAGAAAGGCGCCTTCGGCACCTACTGCTTCGACACGTCCAACCACCAGTGGGCCAA
GGCAGGCCGCTGGGTGCTGCCCTTCCACGGCCGCGCCCTGCGAGTCCCGGAGCTCCACGGCCTCTGGTTCGGCATCGGCG
GCGAAAGCCAGCACGACCTCTGCGCCGTCGACCTCTCGTCTCTGGACCGCGCTCCCAAGGTGCTGCGCAGGTGGCGAGTC
TCCGGCCCTCCCCAACCACTGGCTGTTGATCCGCAGCAGCATGGTGTACCTTGGGGCCAACAGGTTTTGCATAGCCAAAA
CCTATGGCGTTTTTATGGAACCTCAGAAGCATGATGAAGAGCTAGCAGCTCACACGGCTGCTATCCTCACGGGCGTGGAG
ATTGTGAACGGAGAAGCGAGCAGAGGCAAGCTGCGCATGGTCGAGCACAAGAGCAGAACCTACATCTTTGAGCGCTGTGG
CATTGAGTCCATGTTCTA--------------------------------------------------------------
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>chr5D_1007
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--------------------------------------------------------------CGGCAGTTCATCAACCTG
GTGATGAAGGACTTCGGCGGCGGCGGCTCGTATTGGCTGAGCCGCATGATGCCCCATGAGAATCTCTTCTACCCCTCAGC
GGCAGAGGCAATCACGGCACACGCGCAG---CCCAATAAGATGTC------------GCTGCCGTACAGGAGCACCCAGG
AACTCACCCGGCCGGTGGTCAGATTCAAATCATCCCGCGAGGCCTGCTTGACGCTCGACTTCATGCCTTTCTACGGACGA
GGCGG---CGGCGAAGGCAAGATCGTCGCGGTGGACTTCGCCGGCCAAACCGTCCTGTACGACGCCGACGCCGACGCCGA
CGGCGACGGAGGCTCCATTGAG----------------------------------------------------------
--------------------ATGCTGCCCCGCC-TAACTCCTCCAAGTGGCGGAGTCCCATCTCCCTGTGCGTCACCAAG
GCCAGCGCCAACGG---CGCCCAGGACTCCGGTCGCTCCACTTCCCTCTACGCGATCAGCAGCTCGTACCCCAGCGAATT
CGAGGCTCTTGTCCATTACAACCCATACGG------GCTCGGGAGGTGCGATGAAGACAAGGCTTGGCACTGGCGCAATC
TCCCGCCGCCGCCTTACCTCGACGATCCGGCCTGCGAAGCCCGCACCATCCAGTCATACGCGCTGCTCGAGGACGGCGAG
ACCATCTGCATCTCTTCAGAGCGCGAGAAAGGCGCCTTCGGCACCTACTGCTTCGACACGTCCAACCAGCAGTGGGCCAA
GGCAGGCCGCTGGGTGCTGCCCTTCCATGGCCACGCCCTGCGAGTCCCGGAGCTCCACGGCCTGTGGTTCGGCATCGGCG
GCGAGAGCCAGCACGAGCTCTGCGCCGCCGACCTCTCGTCTCTGGACCGCGCTCCCAAGGTACTGCGCAGGTGGCGAGTC
TCCGGCCCTC-CCAACCACTGGCTGTTGATCCGCAGCAGCATGGTGTACCTGGGGGCCAACAGGTTTTGCATAGCCAAAA
CCTATGGCGTTTTCATGGAACCCCAGAAGCATGATGAACAGCTAGCAGCTCACACGGCTGCTATCCTCACCGGCGTGGAG
ATCGTGAACGGAGAAGCGAGCAGAGGCAAGCTGCGCATGGTCGAGCACAAGAGCAGAACCTACATCTTTGAGCGTTGTGG
CATTGAGTCTGTGTTCT---------------------------------------------------------------
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>SNPs
------------S------------S-----------------------------------------S------------
-------------------------S------------------------------------------------------
----------------------S--------------------------------------S------------------
---------S------S---------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S----------S---
--------S---------------------------------------------------------------------S-
------------------------------S-------------------------------------------------
-------------------S------------S---S---------S---------------------------------
------------------------------------------------------------S----------S--------
-------------------------------------S-S----------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
---------S------------------SSS-----------S---S--------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
----------------------------------------S----------------------------S----------
--------------S--S--S-----------SS----------------------------------S-----------
-----SS-----S-------------SS-SSSSSSS-S-S----------------------------------------
--------S-------------------S----S----------------------------------------------
-------------------SS-SS--------------S--------------------S---S----S-----------
-------------------------------------------------------S------------------------
---S----------------------S---------SS-----S---S--------------------------------
---------------------------------------------------S---------------------------S
----S--------------------------------------------------------------------S------
-----------------------------------S--------------------------------------------
------------------------------------S--------------------------------S----------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS----------------------------------------------S----------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------SS----
-------------------------------------------------------------------------S--SSS-
-----------------------------S--------S-SS-------S--S----------------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_840
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--------------------TCAGCGAATCCAGCTTCCAC----------------------------------------
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>reverse_1783
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----------------------CTGACAATGGCTTTGGCACC--------------------------------------
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>forward_1630
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----------GTTCACTGCAACCCCTCTGA--------------------------------------------------
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>reverse_3070
--------------------------------------------------------------------------------
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-----------------------------CCTACTATGCAGCGCCTCTC-------------------------------
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-----------------------------------------------------------------------------
