>input_sequence_59453
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----------GTCGCCGTCGCGTCCCCCGAACACAAAGCGAGGGAGCAGTGGGACACAGCCACACGCGTCCAGCTTCCGC
CAGCCTTCCACAGCTC--GTCTCCGTCTCCTCCGGTTCCTCCTCCCCTCCTCCCTCTACACTTCTCT----CTCTCTCTC
TCTCGCCACAGTCCCCGCCAGATTTGTTGCCTCGCCTCGCCTCGCCTCGCCTCCAC------CTGTATGCCGCCAACGCC
CCCATGGCGTCAACCGCACCACGGCCGCCCCGCCGAGCCGCGACCTTGACACTCCTCCTGCCCTTCCTCCTCCTTTCCTC
CTCCCCGTCCCTCTCCTTCGCCGCTTCGCCGCCGCCGTCGAGCCCCGCCCCGCTCCACGCGCCGCCGCGGCGGGTCGCGT
CCGACTCCGACAGCGCCCCCCCGCCGCCGCACCACCCGCACCCGCACCACC---ACCACCACCGCCCGCCCCCGTCCCCT
CCGC---------GGCTTAACTTCGGCGAGAGGCTCGGGATCGCCATCGCCGGCGTCGCCGTGGCAATGCAGGTCGTCCT
CGGCGCGTTCCTGGCGCTGCGCGCCTGGCAGCTGCGGCGGCTCGACAGGGCCGAGGTGTCCTCCTCCACGCCCCTCACCT
GACCTGACCGCCTGGCCGCCTGCTCTGCTCCTTGCTCGTCCCGCCAGGTCCGTGATTCGTTAATTGTCCGTGATCTGAAA
CCGTCGCTGTAAAGGAAGGAGGCCATGAACGTATGCCTATTCTCGATTAATTCCATTTTTACACGCCGTTCTTTTCGCAT
GTGTTGGGCGCCAGTGCTTTTGCTGTAGGGTGTGTACAATTCGCTTCTGCTCCGTGCAGACCCTAGTAGACAGGCCATGT
GATATACTGATGTGAGAGCCGTGGTGTCTGTTTTATTTGTGAGTAGGTACTAGTACTAGCAAGTGATCGAGATTCCGAAA
TGGTGATATGTTGATTGATTCGTGTGGGGCTGGGACTGA--------TTATAGCTGCTTGCTTAGATGGGCATCAATGTA
CAAACTACAGAGTGATTCAAATTATTTCTGTGGTGCCGTGATCTTAGCTCTTAAGTATGTCACCTGTGCTGGCACTTCAG
AGAATCAATA----TTGCTCCATGCGGAATGATTGAGCCAGCGATCACACAATGAAGTTGCACTTATGAA----------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>chr2B_1_TraesCS2B01G332700
GCAGAGATCATACCAAAACTTTTCTGGGAGCTTCAACTATCGTACTCAATGATATATCTGAACCCACGATGCTTGAAGCA
CTTGTTGTTAGAGAAGCCATGACCCTTGGAGATGATCTTTATGTCCAGTGGATTCACGTTGCTTCAGATTGCATGATGGT
GGTATATAAGATGTCACTCAAGGGAGTTCAACTAGCTATGGTGCAATCATCCATGAAACCATAGACGGGGCGGCAGTTTT
TACAACTGGTAACATAATTTGTGAATTAGGAGCTCGAATGCTGAAGCTCATAATCTAGCCAAGCATCCTTTGTATCTATG
GT-TGCCTGCCATATTTGGTTAAGCCAACC-GATGATCTTATTTTCGTATCTAGAAACACTATGAC-AATTAACAAAGCT
TCGCAAGATTGTCTAAAAAAGGCTTATGTTTGACCATTATTTATTTATTTTT-ATTCATAGTGCTAATCGATTTTTTTGA
GCTCAACGCCTCTCCTCTAT------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------GCAGATT-ACTCTTGCCGCTACAACA
CTCCACAAGGAACCTGACTTGGTTCATACAGCACCGTCTTTGTCATGCTAGTCTGGCTCTTCGCGACCACACTTTCCTAG
TCCTACTCTGCCAAACATTTTGCAAGAACAAAATAGACCGTGACTTTAGACACCAAAAAATCAGCACAACAACGTGCAGT
GTTCAACTCCTTGAGCCAGCCAAACCCTAGCCTCGTGCCAAACATT-AGCAAAACCGAACGAGGCCGTGACTTGAATCGA
CAAAAAACAGTAGCGACTTCCATAGCGGGAAAGCCCTAACCTATACGGAACAGCGAGCGAGGTCCCGTGCCCCGACCTTG
----------CTTGGGGTCAAGCTGTCTGCGTCTCCCCAATTATTACGCCCCGCTGGCGGTAACCTGACTACCTGCCGTA
ACGTTGTTGTTGATTGTGGACAGAGGAGCGAGCGAGTGGCTGTCCGCGGCCCGACCCCCGGGACACGCCACGCAACCGCC
ACCCCCGTCCGTCGCCGTCGCGTCCCCCGAACACAAAGCGAGGGAGCAGTGGGACACAGCCACACGCGTCCAGCTTCCGC
CAGCCTTCCACAGCTC--GTCTCCGTCTCCTCCGGTTCCTCCTCCCCTCCTCCCTCTACACTTCTCT----CTCTCTCTC
TCTCGCCACAGTCCCCGCCAGATTTGTTGCCTCGCCTCGCCTCGCCTCGCCTCCAC------CTGTATGCCGCCAACGCC
CCCATGGCGTCAACCGCACCACGGCCGCCCCGCCGAGCCGCGACCTTGACACTCCTCCTGCCCTTCCTCCTCCTTTCCTC
CTCCCCGTCCCTCTCCTTCGCCGCTTCGCCGCCGCCGTCGAGCCCCGCCCCGCTCCACGCGCCGCCGCGGCGGGTCGCGT
CCGACTCCGACAGCGCCCCCCCGCCGCCGCACCACCCGCACCCGCACCACC---ACCACCACCGCCCGCCCCCGTCCCCT
CCGC---------GGCTTAACTTCGGCGAGAGGCTCGGGATCGCCATCGCCGGCGTCGCCGTGGCAATGCAGGTCGTCCT
CGGCGCGTTCCTGGCGCTGCGCGCCTGGCAGCTGCGGCGGCTCGACAGGGCCGAGGTGTCCTCCTCCACGCCCCTCACCT
GACCTGACCGCCTGGCCGCCTGCTCTGCTCCTTGCTCGTCCCGCCAGGTCCGTGATTCGTTAATTGTCCGTGATCTGAAA
CCGTCGCTGTAAAGGAAGGAGGCCATGAACGTATGCCTATTCTCGATTAATTCCATTTTTACACGCCGTTCTTTTCGCAT
GTGTTGGGCGCCAGTGCTTTTGCTGTAGGGTGTGTACAATTCGCTTCTGCTCCGTGCAGACCCTAGTAGACAGGCCATGT
GATATACTGATGTGAGAGCCGTGGTGTCTGTTTTATTTGTGAGTAGGTACTAGTACTAGCAAGTGATCGAGATTCCGAAA
TGGTGATATGTTGATTGATTCGTGTGGGGCTGGGACTGA--------TTATAGCTGCTTGCTTAGATGGGCATCAATGTA
CAAACTACAGAGTGATTCAAATTATTTCTGTGGTGCCGTGATCTTAGCTCTTAAGTATGTCACCTGTGCTGGCACTTCAG
AGAATCAATA----TTGCTCCATGCGGAATGATTGAGCCAGCGATCACACAATGAAGTTGCACTTATGAACCTTGGTCCC
TTGTCACTCCTGCTATGATGGCTTAGTGATCAGCAAGCTGATTGTAAATCCTTTTTTTAGAACAAGCTGGATGTACCTGT
ACTTTGTTTTCT----------------------------------TGTACTGCATTTCTTTGTATCTGCA---------
CCTGGTCTACTCTGAGTGCAATCACGCTATCATGATAGTAAATTCGGAGGTATCAACTATTTAGTGATCATGGAAAATCA
GCAAACTCAAGGTGTCATGGTTAACTGT---TAGCTGTTCGTGTTATCACAAGTTGTC----------------------
------------------------TGCATAAACAGGAAGTCAGTTGAATGGGCATGTGGTGGGGTAACCCATCTCTTGCT
TGTTT-CCTTCGAGAGGAAAAATAA-TAATAAGGAGCATAGTTATTAGGATCAAATGATTTTTGAATCTGAAATGGTACA
TGGATCATTGGTGATGCATGTGAGAGCCAGATGGTCAGTAGTTACAT---ATGTCCTAAAATTTGCATCTTGGACAACTG
GACAAATCTGACCTTATTTTATTGCTCAGATCCAAGCCCTGAAGTACTTGACTGTAAAAACGTGTGCCAACCTGAATGAG
CAGCTGTCCGCTGAAGAGCAAGATGTGGATGTGGAATGTTCTTCTTGGTATCTTTGTCCTACTAGTTTAGATACCTAAGC
TTTTGTTTGTAGACGCGGGTTTGATTCATTCAGTCTAAATAAGTTTGTGCGTTGAAAGTCCTCTTCTACTGTCACCGATT
AAATTCTACTCCCTCCCGCTCCAAATTAAGTGTCGTAGTTTTGAACTA-GGCAACCCTTAGTTCAAAACCGTGACACTTA
ATTTGGATCTGAGGGAGTACTTGATACATCAACATCA---------ACAATCCCCTCAGT-GAATAGCTGGATCTTCATC
AACCCACCAGCCCGCCCAATTGTACAATGTATACATGATCTTTAGGGCCGTCGATACGCACCAGGCCTAGAAGCTCACGC
GCCAAGCCCAACCGGACTCTACAGAGTTCCTGGATTGGTCCTACACCACCGTCACCTT
>chr2A_1
GCAGAGATCATACCAAAACTTTTCGGGGAGCTTCAACTATGGTACTCAATGATATATCTGAATCCACGATGTTTGAAACA
CTTGC-GTTAGAGAAGCCATGACACTTGAAGATGATCTTTATGTTCAGTGGATTCATGTTGCTTCAAATTGCATGGTTGT
GGTATATAAAATGTCAAGCAAGGGAGTTCAGTTAGCTATGGTGCAATCACCCATGAAACCGTAGACGGGGCAATAGTTTT
TACAACTGGTAACATATTTCATGAATTAGTAGCTCGAATGTCGAAGCTCCCAATCTAGCGAAGCATACTTTATGTCTATG
GACTGCCTGTCATGTTTGGTTAAGCCAACCCGAAGATCTTCTTTTCGTACCTTGAAACACTGTGACGAATTAACAAAGTT
TCGCGAAATTGTCTAAAAA-GACCTATGTTCGCTCATTTTCTATTTTTTTATTATATATAGTGCGAACCGG-TTTTTTTA
GCTCAACACGTCTCCTCTAC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------GCAGGTTAACTCTTGCCGCCACAACA
CTCCACAGGGACCCTGCCTTGGCTCACACAGCACCGTCTTTGTCATGCTGGTCTGGTTCTTCGCGACTACACTTTTCTAG
TCCTACTCTGCCAAACATTTTGCAAGAACAAAAGAGACCGTGACTCGTGACACCAAAAAATCAACACAACAACGTGTAGT
GCAAAACTCAATCAGGCAACCAAGCCCTTGCCTCGTGCCAAACATT-AGCAAAACCGAACG-------------------
-AAAAAACAGTAGCGACTTCCACGGCGGGAAAGCCCTAGCCTATACGGAACAGCGAGCTCGGTCCCGTGCCCCGACCTTG
ACGCGTCTTGCTTGGGGTCAAGCTGTCCGCGTCCTCCCAATTATTACGCCCCGCTGGCGGTAACCTGACTACCTGCCGTA
ACGTTGTTGTTGATTGCAGAGAGAGGAGCGAGCGAGTGGCTGTCCGCGGCCCGACCCCCGGGACACGCCACGCAACCGCC
ACCCCCCTCCGTCGCCGTCGCGTCCCCCGAACACAAAGCGAGGGAGCAGTGGGACACGGCCACACGCGTCCAGCTTCCGC
CAGCCTCCCACAGCTCTCGTCTCCGTCTCCTCCGGTTCCTCCTCCCCTCCTCCCTCTACACTTCTCTCTCCCTCTCTCTC
TCTCGCCACAGTCCCCGCCAGATTTGTTGCCTCACCTCA-----CCTCACCTCCACCTGTATCTGTATGCCGCCAACGCC
CCCATGGCGCCAAGCGCACCACGGCCGCCCCGCCGAGCCGCGACCTTGACACTCCTCCTGCCCTTCCTCCTCCTCTCCTC
CTCCCCGTCCCTCTCCTTCGCCGCCGAGCCGCCGCCGTCGAGCCCCGCCCCGCTCCGCGCGCCGCCGCGGCGGGTCGCGT
CCGACTCCGACAGCGCCCCCCCGCCGCCGCACCACCCGCAGCACCACCACC---ACCACCACCGCCCGCCCCCGCCCCCT
CCGCACTGGCGGCGGCTCAACTTCGGCGAGAGACTCGGGATCGCCTTCGCCGGCGTCGCCGTGGCAATGCAGGTCGTCCT
CGGCGCGTTCCTGGCGCTGCGCGCCTGGCAGCTGCGGCGGCTCGACAGGGCCGAGGTGTCCTCCTCCACGCCCCTCACCT
GACCTGA--------CCGCCTGCTCTGCTCCTTGCTCGTCCCGCCAGGTCCGTGATTCGTTAATTGTCCGTGATCTGAAA
TCGTCGCTGTAA-GGAAGGAAGCCATGAACGCATGCCTATTCTCCATTAATTCCATTTTTACACGCCGTTCTTTTCGCAT
GTGTTGGGCGCCAGTGC-TTTGCTGTAGGGTGTGTACAATTTGCTTCTGCTCCGTGCAGACCCTAGTAGACAGGCCATGT
GATGCACTGATGTGAGAGCTGTGGTGTCTGTTTTATTTGTGAGTAGG---TACTACTAGCAAGTGATCCAGATTCCGAAA
TGGTGACATGTTGATTGATTCATGTGGGGCTGGGACTGATTATAGGCTTATAGCTGCTTGCTTAGATGGGCATCAATGTA
CAAA-------GTGATTCAAATTATTTTTGTGGTGCCGTGATCTTAGCTCTTAAGTATGTCACCTGTGCTAGCACTTCAG
AGAATCAACATTGCTTGCTCCATGTGGAATGATTGAGCCAGCGATCACACAATGAAGTTGCACTTATGAACCTTGGTCCT
TTGTCACTCCTGCTATGATGGCTTAGTGATCAGCAAGCTGATTGTAAATCCTTTTTTTAAAACAAGCTGGCTGTACCTGT
ACTTTGTTTTCTACTACTCCTGGTCTAGTCTGTATTTCTTTCTATCTGCACTGTATTTCTTTCTATCTGCACTGTCCTCT
CCTGGTCTAGTCTGAGTGCAATCACGCTATCATGATAGAAAATTCAGAGCTATCAACTATTTAGTGATCATGGAAAATCA
GCAAACTCCAGATGT-ATGGTTAACTGTTACTAGCTGTTCGTGTTATCACAAGCTGTCCACTTCATCTGTTACCTTCGGG
CAGGTATTGCATGTGTAACTATGATGCATAAACAGGGAGTCGGTTGAAAGGGCATGTCGTGGGGTAACCCATCTCTTGCT
TGTTT-CCTTCGAGAGGAAAG--AA-AAATAAGGAGCATAGTTGTTAGGATCAAATGATTTTTGAATCTGAAATGGTACA
TGGATCATTGGTCATGCATGTGAGAGCCAGATGGTCAGTAGTTACATGGTATGTCCTAAAATTTGCATCTTGGACAACTG
GACAAATCTGACCTTATTTTATTGCTCAGATCCAAGCCCTGAAGTACTTGACTGTAAAAACGTGTGCCAACTTGAATGAG
CAGCTGTCCACTGAAGAGCAAGATGTGGATCTGGAATGTTCTTCTTGGTATCTTTGTCCTACTAGTTTAGATACCTCAGC
TTTTGTTTGTAGACGCGGGTTTGATGCATTCAGTCTAAATAAGTTTCTGCGTCGAAAGTCCTCTTCTACTGTCACCGATC
AAATTCTACTCCTT-CCACTCCAAAATAAGTGGCGTAGTTTTGAACTAAGGCAACCCGTGGTGCAAAACTGTGACACTTA
TTTTGGATCGGAGGGAGTACTTGATATATCAATAGCA---------ACAACAACCCCCTTGGAATAGCGGGGTCTTCATC
AGCCTGCCAGGCCGCCCAATTGTACAATGTACACATGATCTTCTGGGCCGCAGATACACGTCAGGCCTAGAAGCTCACGC
GCCATGCCCAACCGGATTCTACGGAGTTCCTGGATTGGTCCAACTCCACCGTCACCTT
>chr2D_1
GCAGAGATCATACCGAAACTTTTCGGGGAGCTTCAACTATCGTACTCAATGATATATCTGAACC-ACGAGGCTTGAAGCA
CTTGCTGTTAGAGAAGCCATGACCCTTGGAGATGATCTTGATGTTCAATGGATTCACCTTGCTTCAAATTGCATGATGGT
GGTATATAAGATATCTAGCAAGGGAGTTCAATTAGCTATGGTGCAATCATCCATGAAACCATAGACGGGGCAATAGTTTT
TACAACTGGTAACATAGTTCATGAATTAGGAGCTCGAATGTCGAAGCTCATAA---------------------------
-----CCTGTCATGTTTGGTTAAGCCAACCCCATGATCTTCTTTTCATACCTAGAAACATTGTGACGAATTAACAAAGTT
TCGCAAGATTGTCTAAAAAAGGCTTATGTTCGCTCATTTTCTTTTTATTACTTATTCATAGTGCTAATCGA--TTTTTTA
GCTCAACGCCTTTCCTCTAGAGAGAATTCCTTATTTAACATCATGTCTAAATTTTATGCCCTATTTGACATCGATAAATT
ATTTCTTCCCTATCTAACAACAAGTCTAAATTTTATGCCTTTTATGACACTTTTGTCTATTTTAAGCCTAAACGATACCT
GAAAAGACCCCTTTGCCCCTCATGTGCGTATGTTTATGCACGCGCGTGCGTTCTGCTGTGTGTGTGAGCGCACGCACGTG
TGTTCTACTGATGCTGCGTGTGTGCGCGTGTGCGTATGTGCTGCTGCGTGCCTGCGTGTTTGTGTGTGCGTGCGTGCGTG
TTGCGACAAATTTGACAAATTTGACCTGTGGACGAAATCAAATCACAGAATGAACTGCCTCTGAAACTATTTCACGCGGC
TGACCTTTTTGTGTGACGCCCGACACGAAGGCGCCACACTACACTGTGCAACGCCTCACAGATAGGCGCTACACGCCTGG
CGAGCGTTGCACCCCAGACTGCCTAAAAATTGCCAAGTCATTGTGCAGAGCCTAAGAGCTAGACGCTGCACTGTATAGTG
TGGCGCCTAACTCTCAGGCGCTGCACTAGTGGTTGCACTACAAAATGAAGCAACCACTATTGCATCGCCTAGAAGCTAGG
CGCTACACTGTATAGTGTGGCGCCTAACTCTCAGGCGCTGCACACTGACTTAGTAATTTTTGGATCACACGGGTGCGACG
CTGGCTAGGCGTGTGGCGCCTATGTGTGAGGCGTTGTACAGTGTAGTGTGACGCCTTCGTGTCGGGCGTCACACAAAAAG
GTCAGCCGCGTGAAATAGTTTCACGGGCAGTTCATTCTGTGATTTGATTTCATCCATAGATCAAATTTGTCAATTTTGCC
GCGTGCTGCTGCACATGTTGTTTGGTGTGTGCTGTTGCGTGACTGCGTGTTTGTGTGTGCTTGCGTGCGGCTGTGTGTGT
TGATGCGTGGGTGTGTGTTGCTGTGTGCTGCGTGCATGTGTGTTGCGTTCTTGTGTATGTGCTGCATGTGTGTGCTACTG
CCCCATACTGATGTTGTGTGTGAGCTACTGTCTCGCACACACATGAAGGGCAAAAGGGTCTTTTCAGGTGTCATTTAGTC
TTAAAATGGACGAAAATGCCATAAAGGGCACAAATTTTAGACTCGTTGTTAGATAGGGAAAAAAGATTTTCAGTGTTAAA
TAGGGAAACGAAATTTAAGATGGTGTTATATAAGGAGTTGTTTCTTTCCTCTAAGCAGATT-ACTCTTGCCGCCACAACA
CTCCACAAGGACCCTGACTTGGCTCATACAGCACCGTCGTTGTCATGCTGGTCTGGTTCTTGGCGACTACACTTTCCTAG
TCCTACTCTGCCGCACATTTTGCAAGAACAAAAGAGACCGTGAGTGGAGACACCAAAAAATCGACACAACAACGTGCAGT
GTACAACTCAATCAGCCAGCCAAACCCTAGCCTCGTGCCAAACATTTAGCAAAACCGAACGAGACTGTGACTTGAATCGA
CAAAAAACAGCAGCGACTTCCATAGCGGGAAAGTCCTAACCTATACGGAACAGCGAGCGAGGTCCCGTGCCCCGACCTTG
ACGCGTCTTGCTCGGGGTCAAGCTGTCCGCGTCCTCCCAATTATTTCGCCCCGCTGGCGGTAACCTGACTACCTGCCGTA
ACGTTGTTGTTGATTGTGGACAGAGGAGCGAGCGAGTGGCTGTCCGCGGCCCGACCCCCGGGACACGCCACGCAACCGCC
ACCCCCGTCCGTCGCCGTCGCGTCCCCCGAACACAAAGCGAGGGAGCAGTGGGACACGGCCACACGCGTCCAGCTTCCGC
CAGCCTCCCACAGCTC--CTCTCCGTCTCCTCCGGTTCCTCCTCCCCTCCTCCCTCTACACTTCTCT----CTCC--CTC
TCTCGCCACAGTCCCCGCCAGATTTGTTGCCTCACCTC---------------CACCTGTATCTGTATGCCGCCAACGCC
CCCATGGCGTCAACCGCACCACGGCCGCCCCGCCGAGCCGCGACCTTGACACTCCTCCTGCCCTTCCTCCTCCTCTCCTC
CTCCCCGTCCCTCTC---CGCTGCCGAGCCGCCGCCGTCGAGCCCCGCCCCGCTCCACGCGCCGCCGCGGCGGGTCGCGT
CCGACTCCGACAGCGCCCCCCCGCCGCCGCACCACCCGCACCACCACCACCACTACCACCACCGCCCGCCCCCGCCCCCT
CCGCACTGGCGGCGGCTCAACTTCGGCGAGAGGCTCGGGATCGCCTTCGCCGGCGTCGCCGTGGCAATGCAGGTCGTCCT
CGGCGCGTTCCTGGCGCTGCGCGCCTGGCAGCTGCGGCGGCTCGACAGGGCTGAGGTGTCCTCCTCCACGCCCCTCACCT
GACCTGG--------CCGCCTGCTCTGCTCCTTGCTCGTCCCGTCAGGTCCGTGATTCGTTAATTGTCCGTGATCTGAAA
TCGTCGTTGTAAAGGAAG-AAGCCATGAACGTATGCCTATTCTCCATTAATTCCATTTTTACACGCCGTTCTTTTCGCAT
GTGTTGGGCGCCAGTGC-TTTGCTGTAGGGTGTGTACAATTTGCTTCTGCTCCGTGCAGACCCTAGTAGACAGGCCATGT
GATATACTGATGTGAGAGCTGTGGTGTCTGTTTTATTTGTGAGTAGGTACTAGTACTAGCAAGTGATCGAGATTCCGAAA
TGGTGATATGTTGATTGATTCATGTGGGGCTGGGACTGATTATAG--------CTGCTTGCTTAGATGGGCATCAATGTA
CAAACTACAAAGTGATTCAAATTATTTCTGTGGTGCCGTGATCTTAGCTCTTAAGTATGTCAACTGTGCTAGCACTTCAG
AGAATCAATA----TTGCTCCATGTGGAATGATTGAGCCAGCGATTACACAATGAAGTTGCACTTATGAACCTTGGTCCC
TTGTCACTCCTGCTATGATGGCTTAGTGATCAGCAAGCTGATTGTAAATCCTTTTTTTAAAACAAGCTGGCTGTACCTGT
ACTTTGTG-TCT----------------------------------TGTACCGTATTTCTTTGTATCTGCACTGTCCTCT
CCTGGTCTACTCTGAGTGCAATCACGCTATCATGATAGAAAATTCAGAGGTATCAACTATTTAGTGATCATGGAAAATCA
GCAAACTCAAGATGTCATGGTTAACTGT---TAGCTGTTCGTGTTATCACAAGTTGTCCACTTCCTCTGTTACCTTCGGG
CAGGTATTGCATGTGTAACTATGATGCATAAACAGTGAGTCAGTTGAAAGGGCATGTCGTGGGGTAACCCATCTCTTGCT
TGTTTTCCTTCGAGAGGAAAATAAATAAATAAGGAGCATAGTTATTTGGACCAAATGATTTTTGAATCTGAAATGGTACA
TAGATCATTGGTCATGCATGTGAGAGGCAGCTGGTCAGTAGTTACAT---TTGTCCTAAAATTTGCATCTTGGACAACTG
GACAAATCTGACCTTATTTTATTGCTCAGATCCAAGCCCTGAAGTACTTGACTGTAAAAACGTGTGCCAACTTGAATGAG
CAGCTGTCCACTGAAGAGCAAGATGTGGATGTGGAATGTTCTTCTTGGTATCTTTGTCCTACTAGTTTAGATACCTCAGC
TTTTGTTTGTAGACGCGGGTTTGATGCATTCAGTCTAAATAAGTTTCTGCGTTGAAAGTCCTCTTCTACTGTCACCAATT
AAATTCTACTCCCTCC-GCTCCAAAATAAGTGTTGTAATTTTGAACTAAGGCAACCCTTAGTTCAAAACTGTGACACTTA
TTTTAGACCGGAGGGAGTACTT-ATATATCAATAGCTACAACAACGACAACAACCCCCTCGGAATAGCGGGATCTTCATC
AAC--ACCAGCCCGCCCAGTTGTACAATGTACACATGATCTTCTGGGCCGCAGATACACGTCAGGCCTAGAAGCTCACGC
GCCATGCC--------------------------------------------------
>SNPs
------------------------S-------------------------------------------------------
----S---------------------------------------S---------------------S-------------
----------------SS-------------S---------------------------------------SSS------
----------------S--SS-------------------SS-----------------S------S----S-S------
-S-------S---S--------------------------S--------S-----------S----------------S-
------------------------------S-SS----S-S---------S--------------------S------S-
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
-----------S----------S--------------------------S------S----------S------------
---------------------------------S-----------SS----------------S----------------
--S------SS-S--------------------------------------------------S-S--------------
--------------------------------------------------------------------------------
---------------------------S-----SS---------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
------S-------------------------------------------------------------------------
---------------------------------S----SSSSSS----S-------------------------------
--------------------------------------------------------------------------S-----
------------------------SSS-----------------------------------------------------
------------------------------------------SS------------------------------S-----
-----------------S---------------------------S----------------------------------
--------------------------------------------------------------------------------
-------SSSSSSSS-----------------------------------------------------------------
S-------------------S-----------------------S-----------------------------------
-----------------S-----------------------S--------------------------------------
-------------------S------------------------------------------------------------
---------------------S----------------------------------------------------------
---------S------------------------------------------------------------S---------
------------------------S-------------------------------------------------------
-----------------------------------------------------------S----------S---------
-----------------------------------------------------S--------------------------
--------------------------------------S------S----------------------------------
-----------S--------------------------------------------------------------------
------------------------------------S-----------S--------S----------------------
---------------------SS---S-----------------------------------------------------
------------S-------------------------------------------------------------------
-----------------------------------------------------------------------S--------
---------S------------------------------------------------------------------S---
-------------------------S--------------------S---------------------------------
-------------------------S-------------------------------------------S----------
S--------S----------------S-----S-S---------------SSS--S-SS---------S-----------
----S--------------------------S----------SS------SS-----S-SS-------------------
----S-----------S-----S------------------S--S-------------
>forward_1931
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------ACGTGCAGT
GTTCAACTCCT---------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>reverse_2961
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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CCGTCGCTGTAAAGGAAGGA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>forward_1986
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TAGCAAAACCGAACGAGGCC--------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------
>reverse_3385
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------CGGAATGATTGAGCCAGCGA------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>forward_2439
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------AGATTTGTTGCCTCGCCTCG-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------
>reverse_4452
--------------------------------------------------------------------------------
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---------------------------------------------------CGATACGCACCAGGCCTAG----------
----------------------------------------------------------
