>input_sequence_59397
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-------------------------------------------------ATGCGTGCCAAAAAGGGAGACGACAACAGGA
GCATTGGCCTGAGAGCTTGCACGCAAACAGCAAACTCCCTTCCCACCTTGCATCACAGCGCCTTGGGATTCTGTAAGCTG
GAGCTGGACCACACGAGGCCGGCCATGGCCTCCCCTCGCCAGGACGGACACGGACCACACGATGGCGCGCCGACGTACGC
CGGCATGGCGGAGCTGGTGCCGG---CGCTCCCGCTCGAGACGCGGTGCCTGCCGTTCGCGCTGCGGCGCTACGGCGGCT
TCTGGCTGCCGGAGCCGGCCCTGCGGCGCGGCCTCCCGGCGTTACACGCCGGGTTCGCTCCCAGACGCGCAGACGTGCTC
CTCGCCAGCTACCCCAAGTCCGGCACCACCTGGCTCAAGGCCCTCGCCTTCGCCACCGTCCGCCGCGCCGCGCACCCGCC
CTCTTCCAT---CGACCACCCGCTCCGCCGTCGCAACCCGCAGGACTGCGTCCCGTTCATCGAGTTCCATG------ACG
GGGA----------------------------------------------------------------------------
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------------------------------------CAT------------------GGC--------------------
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----------------------------------------GGAGCTCGATGCGCTCCCTTCGCCGCGCGTGCTCGCCACG
CACCTCCCCTACTCGCTCCTCCCCGACCGCGTCGTCGCCGACGACGGCGCGCG---GATCGTGTACGTCTGCCGGGACCC
CAAGGACGCTCTGGTGTCCTCGTGGCTGTTCACCAGGAAGGCGTCGCCGAGTATCGGAGTCGACTCCGACTCGTACTCGC
TGCAGGAGGC------------GGCCAAGCTGTTCCGCGAGGGCCGGTGCTTCTACGGCCCGCAGTGCCGGCACGTGCTC
CAGTACTGGGAGGCGAGCCGCCGCCCCTGCGGCGGCGGC---GAGGTGCTGTTCCTGAGGTACGAGGAGATGCTGCGCGA
CCCGGCGGGGAGTCTGAAGACGATGGCGGAGTTCATGGGATGCGGCTTCTCCGAGGAGGAGGTGGCGCGAGGGGTGGTGG
ACGAGATCGTGGACCTGTGCAGCCTGGAGAAGCTGAAGAACATGGAGGCCAACAGGGACGGG------CGGCGGAACGCA
TCGGGCATCAGGAGCGACTCTTTCTTCCGGAAGGGGGTCGCCGGGGACTGGAGCAGCCACATGTCGCCGGAGATGGGGAA
GATGCTGGACGAGGCCACGGAGGACGCGCTCCGGGGGTCTGGGTTCAGCTTCTCCGGCTAA-------------------
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--------------------------
>chr5B_1_TraesCS5B01G357700
GGCAGAGGGTGTCGGATAGGCGGCTGGAGGCGAACATCCAGGACACCTTTACTTGGTCCTGGACTATGGACAGGCAGTTC
TCGGCCAAGTCTGCATATGAGGCGAGATTCATGGGCAGAGAAGTTTCTCCCACGGCTGCATTCATGTGGAAATCGGGAGC
CCCGCTCAAGTGTCGTTTTCTCGCCTGGCTTGCCCTACAGGGACGGGTGTGGACCTCGGACAGACTAGCACGACGTGGCC
TACCGCATCAGGATACCTGTCCGTTCTGCGACCAACATGACGAAACAATCCAGCACCTACTGGTAGGTTGCGTTTTTACG
AGACAGGTATGGAGATGGCTAACTGTCAGAACGGGCAGGGATGCCTTCGAACCAAGGCATGA--AGAGCCTACATGCATG
GTGCACCAGGCAGGATCGGAGCAGACCGGACACAAGGAACATTCGGGCATTATGCCTCCTTGGCATGTGGCTCATCTGGA
AACATCGGAGCGACATCGTCTTCAACGACGCGACACCATTGCTAGCAATTCTCACGCAGCACATTACAGAAGAGGGAACC
TTGTGGGCAAAGGCAGGGCTGCTCAAGGGCACAATTCGAGGTTTCGAGGTGGGGAACGTGGAGTGGACAGCGAGGGAGTA
GTTAGCCAT-GAATGTGAGGTGGATGCGGCTTGACCGCTTGTACATAT----GATGTATA-TTTGTGACTTTGGGGAGCT
TTTCCCC-TTCTCCTTTAATGCATAATACGCACACTCATGCCTATTCGGGAGACAAATTGACAGCTCAAACTCATCCTGT
AAAACTCTGTGAATGTCCGTTGTTGTAGCATTGCTGTATCTCGCACTCTCTGCATCGATCGAGCATGCATAACAAACAAA
TCACGGGAGCACGGGAGCACAATACGACAATTATGGCGTCCACATACGGCATATTGACAAATGCTAGTGCCAAATGCAGA
ATGACTTTTTGCGTTGGTTTCCACCAAATCATTCCAACCGACTATAAAAATGCGTGCCAAAAAGGGAGACGACAACAGGA
GCATTGGCCTGAGAGCTTGCACGCAAACAGCAAACTCCCTTCCCACCTTGCATCACAGCGCCTTGGGATTCTGTAAGCTG
GAGCTGGACCACACGAGGCCGGCCATGGCCTCCCCTCGCCAGGACGGACACGGACCACACGATGGCGCGCCGACGTACGC
CGGCATGGCGGAGCTGGTGCCGG---CGCTCCCGCTCGAGACGCGGTGCCTGCCGTTCGCGCTGCGGCGCTACGGCGGCT
TCTGGCTGCCGGAGCCGGCCCTGCGGCGCGGCCTCCCGGCGTTACACGCCGGGTTCGCTCCCAGACGCGCAGACGTGCTC
CTCGCCAGCTACCCCAAGTCCGGCACCACCTGGCTCAAGGCCCTCGCCTTCGCCACCGTCCGCCGCGCCGCGCACCCGCC
CTCTTCCAT---CGACCACCCGCTCCGCCGTCGCAACCCGCAGGACTGCGTCCCGTTCATCGAGTTCCATG------ACG
GGGA----------------------------------------------------------------------------
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------------------------------------CAT------------------GGC--------------------
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----------------------------------------GGAGCTCGATGCGCTCCCTTCGCCGCGCGTGCTCGCCACG
CACCTCCCCTACTCGCTCCTCCCCGACCGCGTCGTCGCCGACGACGGCGCGCG---GATCGTGTACGTCTGCCGGGACCC
CAAGGACGCTCTGGTGTCCTCGTGGCTGTTCACCAGGAAGGCGTCGCCGAGTATCGGAGTCGACTCCGACTCGTACTCGC
TGCAGGAGGC------------GGCCAAGCTGTTCCGCGAGGGCCGGTGCTTCTACGGCCCGCAGTGCCGGCACGTGCTC
CAGTACTGGGAGGCGAGCCGCCGCCCCTGCGGCGGCGGC---GAGGTGCTGTTCCTGAGGTACGAGGAGATGCTGCGCGA
CCCGGCGGGGAGTCTGAAGACGATGGCGGAGTTCATGGGATGCGGCTTCTCCGAGGAGGAGGTGGCGCGAGGGGTGGTGG
ACGAGATCGTGGACCTGTGCAGCCTGGAGAAGCTGAAGAACATGGAGGCCAACAGGGACGGG------CGGCGGAACGCA
TCGGGCATCAGGAGCGACTCTTTCTTCCGGAAGGGGGTCGCCGGGGACTGGAGCAGCCACATGTCGCCGGAGATGGGGAA
GATGCTGGACGAGGCCACGGAGGACGCGCTCCGGGGGTCTGGGTTCAGCTTCTCCGGCTAAGCTCCGGCGAGCACTGGCC
A--GGGCGGTAGCGCGG--CAAACAACAATGCCATTGCAAAGCACGGCTTGGAACACATGTGTTTGTGGCGATACATGGA
TTTAAGGCGCGAGTTTGG-TTCCATTTTCTTGCTCGAAAGTTGATTGTCTTGTAATAAGTTCAAACAGTAGTTTGATAAC
TCATTCCAAATGTTTCTTTCCCACATTTCCGAATCATTCCAGTTCTACAATTTCAGTCCTCATTTAGTATATTATTTAAA
TACAATTCCGGAATTTTCAAGTGTGTTCAATGAAAATGGGGACCCGTGCAAGCACATAGGAAAAGCAGTAGAGTTGATGT
TGGAGGCAGATCAATGCTAGAAATTGCCATAAACAACAAAAAAAGTGCAGAATTTGGAGACTGAAAAGAAAAACAGCAAA
GGTACCATTATTAGAAATTCCTTTGAGCACTTTTCTGATCTTAAATTCATTGCAGTAGCTAGTAAGATAGGGATAGAAAT
AGATTCTGGTCAGGAAGACCATACAATTAATATGCTTGACACTGCTTTTCAAATGTCTGAAGGACAGAAAATTGAAAACA
CCAAGCAAGATAGAGGTAGGACTTTGACACCTGCTGTAGCTAATAGAAATGATGTGAGGCCACTAATAGAAAACAGGGCA
TTTGTCCCGGTTGGTGAGGGCCTTTTGTCCCGGTTCTTGAACCGGGACTAAAGGATCGTTACTAATGCCTCCCCTCTTTA
GTCCCGGGTCTAACACGAACCGGGACAAATGGGCCTCCACGTGGCCGGTGCGCCGAGCCCAGGCAGGAGGGCCTTTGGTC
GCAGTTGGTGGCACCAACCGGGACCAAAAGGCATCAGTGGTTGGGGTTTTTTTTTTGAAGAGGGGGGTTGGGGGTTTTGG
GGGGTTAATTTAGGTGTTTCATATATTGTGTTAGCTAGCTAATTAATAGAGAGAAGTATCCTCTTTTATGTCTGTGCTTG
GTCGACGCTACGTACTATACATAGAG
>chr2D_1
GGCAGAGGGTGTCGGACACGCGGCTGGAGGAAAACACAAAAGACACCTTTACTTGGTCCTGGTCATTGGACGGGCAGTTC
TCAGCCAAGTCTGCGTACGAGGCGAGATTCATGGGTGGAGAAGTTTCTCCCACGGCTTCATTCACGTGGAAGTCGGGAGC
CCCGCTCAAGTGTCGTTTCTTCGCCTGGCTTGCCCTAAGGGGACGGGTGTGGACCTCGGACAGACTGGCACGACGTGGCC
TACTGCACCAGGATACCTGCCCGCTCTGCGACCAACATGACGAAACAATCCAGCACCTACTGGTAGGTTGCGTTTTCGCA
AGACAGGTATGGAGATGGCTGAGTGTCAGAACAGGTAGGGATGCCTTCGAACCAAGGCATGACGAGAGCCTACAGGCTTG
GTGCACCAGGCAGGATCGGGGCAGGCAGGACACGAAGAACATTCGGGCATTGAGCATCCTTGGCATGTGGCTCATCTAGA
AACATCGGAATGACATCGTCTTCAACGGCGCGACACCATCGTTGGCAATGCTCACACAGCACATGACTGAGGAAGGAACC
TTGTGGGCAAAGGTAGGGCTGCTCAAGGGCACAATTAGAGGTTTCGAGGTGGGGAACGTGGAGTGGGCAACGAGGGAGTA
GTTAGCTTACGAATGTGAGGTGGATGCGGCTTGACCGCTTGTACATAT----GATGTAAA-TTTGTGACATTGGGGAGCT
TTCCCCC-TCCTTCCTTAATGTATGATATGCACACTCGTGCGTATTCG--------------------------------
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--------------------------
>chr2D_1
GGCAGAGGGTGTCGGACACGCGGCTGGAGGAAAACACAGAAGACACCTTTACTTGGTCCTGGTCAGTAGACGGCAAGTTC
TCAGCCAAGTCGGCGTATGAGGCGAGATTCATGGGCAGAGAAGTCTCTCCCACGGCTGCATTCACGTGGAAGTCGGGAGC
CCCGCTCAAATGCCGTTTCTTCACATGGCTTGCCCTAAGGGGACGGGTGTGGACCTCGGACAGACTGGCGCGACGTGGCC
TACCGCACCAGGATACATGCCCGTTCTGTGACCAAAATGATGAAACAATCCAGCACCTACTGGTAGGTTGCATTTTCGCA
AGGCAGGTATGGAGATGGCTGAGTGTCAGAACAGGTAGAGATGCCTTCGAACCAAGGCATGAGGAGAGCTTACAGGCTTG
GTGCACCAGGCAGGATCGGAGCAGGCGGGACACGAAGAACATTTGGGCATTGAGCATCCTTGGCATGTGGCTCATCTGGA
AACATCGGAACGATATCGGCTTCAATGGAGCGACACCATCATTGGCAATGCTCACGCAACGCATGACCGAGGAAGGAACC
TTGTGGGCGAAGGCAGGGCTGCTCAAGGGCACGATCAGAGGCTTTGAGGTGGAGAACGTGGAGTGGGCAGCGAGGGAGTA
GTTAGCTTACGAAGGCGAGGTGGATGCGGCTTGCCCGCTTGTACATAT----GATCTAAAA--TGTGATATTGGGGAGCT
TTCCCCCCTCCTTCTTTAATATATGATACGCACACTCGTGCGTATTCG--------------------------------
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--------------------------
>chr2D_1
GGCAGAGGGTGTCGGACACGCGGCTGGAGGAAAACACAGAAGACACGTTTACTTGGTCCTGGTCAGTAGACGGCAAGTTC
TCAGCCAAGTCGGCGTATGAGGCGAGATTCATGGGCAGAGAAGTCTCTCCCACGGCTGCATTCATGTGGAAGTCGGGAGC
CCCGCTCAAATGACGTTTCTTCACATGGCTTGCCCTAAGGGGACATGTGTGGACCTCGGACAGACTGGCACGATGTGGCC
TACCGCACCAGGATACATGCCCGTTCTATGGTCAAAATAATGAAACAATCCAGCACCTACTGGTAGGTTGCATTTTCACA
AGGCAGGTATGGAGATGGCTGAGTGTCAGAACAGGTAGAGATGCCTTCGAACCAAGGCATGAGGAGAGCCTACAGGCTTG
GTGCACCAGGCAGGATCGGAGTAGGTAGGACACGAAGAACATTCGGGCATTGAGCATCCTGGTCATGTGGCTCATCTGGA
AACATCGGAATGATATCGTCTTCAACGGAGCGACACCATCGTTGGCAATGCTCACGCAACGCATGACCGAGGAAGGAACC
TTGTGGGCGAAGGCAGGGCTGCTTAAGGGCACGATCAGAGGCTATGAGGTGGAGAACATGG-------------------
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--------------------------
>chr6B_20
-------------------GCGGCTGGCAGCAAACATACATGACACATTTACTTGGTCCTGGACGATGGATGGCCAGTTC
TCGGCTAAGTTTGCATACGAGGCTAGATTCATGGGAAGGGAAGTGTCACCCACGGCTGCATTCATGTGGAAGTCGGGAGC
CCCGCTCAAGTGCCGCTTCTTCACTTGGCTTGCACTCAAGGGACGACTGTGGACTTCAAACATACTTGCCAGGCGTGGTC
TACCGTATCAAGATACCTGCTCGTTCTATGATCAACATGATGAAGCAATCCAGCACCTTCTGGTGGGTTGTGTATTTGCG
AGGCAGGTATGGAGATGGCTCAGTATCAGAACAGGCAAAGACGCTTTTGAACCAAGACATGAGGAATGCCTGGAGGCTTG
GTGCACCAAGCAGGACCGGAGCAAGCAAGACAGGAGGAACATTCGGACTTTGAGCCTCCTTGGCATGTGGCTCATCTGGA
AGCATCGAAATGACATCGTCTTCAACGGCACGACGCCATTGCTGGCGAGGATCATGCAGCACATGACCGAGGAAGGAATC
TTGTGG-CGAAGACGGGACTGCTCAAGGGTGCAATTAGAGGGTTCGAGGTGGGAAACATAGGGTGGGCAGTGAGGGAGTA
GTTAGTCCAAGAGTGTGAGGTGGATGCGGCTTGACCGCTTGTACATATCTATGATGTAACGCGTGTAACCTTGGGAAGCT
TTTTCTCACCCTTCTTTAATGCATGATATGCACACTCATGCGTATTCG--------------------------------
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--------------------------
>chr4B_22
---------------------GGCTGGAGGCGAACATACATGACACCTTTACTTGGTCCTCGACTTTGGACGGGCAGTTC
TCAGCCAAGTCTGCATATGAGGCGAGATTCATGGGCAGAGAAGTTTCTCCCACGGCTGCATTTACGTGGAAATCGAGAGC
CCCGCTCAAGTACCGTTTTTTCGCCTGGCTTGCCCTACAGGGACGGGTGTGGACCTCGGACAGACTAGCATGACGCGGCC
TACCGCACCAGGATACCTGCCCGTTCTGCAACCAACATGACGAAACAATCCAGCACCTACTGGTTGGTTGCGTTTTTGCG
AGACAGGTATGGAGATGGCTGAGTGTCAGAACGGGCAGGGATGCCTTCGAACCAAGGCATGAAGAGAGCCTACAGGCTTG
GTGCACCAGGCAGGATCGAAGCAGGCAGGGCACGAGGAACATTCGAGCATTGAGCCTCCTTGGCATGTGGCTCATCTGGA
AACATCGGAACGACATCGTCTTCAACGGCGTGACACCATCGCTGGCAATTCTCACGCAGCACATGACAGAAGAAGGGACC
TTGTGGACAAAGGTAGGGCTGCTCAAGGGCACAATTCGAGGTTTCGAGGTGGGGAACGTGGAGTGGACAGCGAGGGAGTA
GTTAGCCTACGAATGTGAGGTGGATGCGGCTTGACTGCTTGTACATAT----GATGTAAA-ATTGTGACTTTGGGGAGCT
TTCC----CCCTCCTTTAATGCATGATACGCACACTCGTGCGTATTCGAGAAAAAAAA----------------------
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----------------------------------------------------------------------------CTTG
ACA-----------------------------------------------------------------------------
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--------------------------
>chr3B_240
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------C
TACCGCACCAGGATACCTGCCCCTTCTGCGACCAATATGACGAAACAATTCAGCACCTACTGGTGGGTTGCATTTTCTCG
AGAGAGGTATGGAGATGGATGAGTGTCAGAACAGGGAGAGATGCTTTCGAACCAAGGCATGAGGAGAGCCTTGAGACATG
GTGCACCAGGCAGGACCGGAGCAGGCAGGACACGAGAAACATTCGAGCGTTGAGCCTCCTGGGTATGTGGCTCATCTGGA
AACATTGGAATGACA---------ATGGCGCGACACCGTCATTGGCAATGCTCACGGAACACATGACAGAGGAAGGAATT
TTGTGGGCAAAGGCAGGGCTGCTCAAGGGAACGATTAGAGGTTTCGAGTTGGGGAACTTGGAGTGGGCAGCGAGGGAGTA
GTTAGCCTACAAATGTGAGGTGGATGCGGCTCGACCGCTTGTACATAT----GATGTAAAGTTTGTGACTTTGGGGAGCT
TTCCCCA-TCCTTCTTTAATGCATGATACGCACACCCGTGTGTATTCGAGAAAAAAA-----------------------
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>chr5D_1140
CCTCGCCA------------------------------------------------------------------------
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-----------------------------------TCGCCAGGACGGAGACGGACCACACGACGGCGCGCCGACGTACGC
CGGCATGGCGAAGCTGGTGCCGG---CGCTCCCGCTCGAGACGCGGTGCCCGCCGTTCGCGCTGCGGCGCTACGGCGGCT
TCTGGCTGCCGGAGGCGGCCCTGCGGCGCGGCCTCCCGGCGTTGCACGCCGGGTTCGCGCCCAGGCGCGCAGACGTGCTC
CTCGCCAGCTACCCCAAGTCCGGCACCACCTGGCTCAAGGCCCTCGCCTTCGCCACCGTCCGCCGCGCCGTGCACCCGCC
TTCTTCCAT---CGACCACCCGCTCCGCCGTCGCAACCCGCAGGACTGCGTCCCGTTCCTCGAGTTCGACTTCGACCACG
GGGA----------------------------------------------------------------------------
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------------------------------------CAT------------------GGC--------------------
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----------------------------------------CGAGCTCGAGGCGCTCCCTTCCCCGCGGGTGCTCGCCACG
CACCTCCCCTACTCGCTCCTCCCCGACCGCGTCGTCGCCGACGACGGCGCGCG---GATCGTGTACGTCTGCCGGGACCC
CAAGGACGCGCTGGTCTCCTCGTGGCTCTTCACCAGGAAAGCGTCGCCGAGTGTCGGAGTGGACTCCGACTCCTACTCGC
TGCAGGAGGC------------GGCCGAGCTTTTCCGCGAGGGCCGGTGCTTCTACGGCCCTCAGTGCCGGCACGTGCTC
GAGTACTGGGACGCGAGCCGCCGTCCCTTCGGCGGCGGC---GAGGTGCTGTTCCTGAGGTACGAGGAGATGCTGCGCGA
CCCGGCGGGGAGTCTGAAGACGATGGCGGAGTTCATGGGATGCGGCTTCTCCGAGGAGGAGGTGGCGCGAGGGGTGGTGG
ACGAGATCGTGGACCTGTGCAGCCTGGAGAAGCTGAAGAACATGGAGGCCAACAGGGACGGG------CGGCGGAACGCG
TCGGGCATCAGGAGCGACTCTTTCTTCCGGAAGGGGGTCGCCGGGGACTGGAGCAGCCACATGTCGCCGGAGATGGGGAA
GATGCTGGACGAGGCCGTCGAGGAGGCACTCCAGGGGTCTGGGTTCAGCTTCTCTGGCTGAGCTCCGGCGAGCACTGGCC
A--GGGCGGTAGTGCGGGGCAAACAACAATGTCATTGCAAAGCACGGCTTGGAACACATGT-TTTGTGGCGATCCATGGA
TTTAAGGCGCGAGTTTGA-TTCCAGTTTCTTGCTCGAAAGTTGATTGTCTTGTAA---GTTCAAACAGTAGTTTGATAAC
TCATTCCAAATGTTTCTTTCCCAAAGTTCCGAATCATTCCAGTTCTACAATTTCAGTCCTCATTCAGTATCTTATT----
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--------------------------
>chr5D_1169
CACGGCGGCG----------------------------------------------------------------------
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------------------------------------------------------------------GCGCCGACGCACGC
CGGCATGGCCGAGCTGGTGCCGG---CGCTCCCACTGGAGACGCGGTGCCCACCGTTCGCGCTGCGGCGATACGCCGGGT
TCTGGCAGCCGGAGGGGGTGCTCAGGCGCGGCCTCCCGACGTTGCACGCGCGCTTCGCGCCGAGGCCCACGGACGTGCTC
CTTGCCAGCTTCCCCAAGTCCGGCACCACATGGCTCAAGGCCCTCGCCTTCGCCACCCTTCACCGCGACGCCCACCCGCC
GTCCTCCGACGCCGACCACCCGCTCCGCCGCCGCAACCCGCACGACTGCGTCCGGTTCCTGGAGGTCGACTCCGCTCTCG
AGCA----------------------------------------------------------------------------
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------------------------------------CACGGACGTGGACGCCGTGGCGGC--------------------
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----------------------------------------CGAGATCGAGGCGCTCCCTTCCCCGCGCCTGCTCGCCACA
CACCTGCCCTACTCCCTCCTACCCGAGCGCGTCGTCTCCGCCGGCGGCCCCCG---GATCGTGTACGTCTGCCGGGACCC
CAAGGACGCGCTGGTCTCCTCGTGGTTGTTCACCAGGAAGGCGTCGGCGAGCGCCGGGGTCGACGGGGATGCGTTCTCGA
TGCAGGAGGC------------GTTCGAGCTGTTCCGCGAGGGCCGGTGCTGCTGCGGCCCGCAGTGGCGGCACGTGCTC
GAGTACTGCGAGGCGAGCCGCCGTCGCTCCGGTGGCGGGGGCGAGGTGTTGTTCCTGAGGTACGAGGAGATGCTGCGCGA
CCCGGCGGCGAACCTGAAGACGATGGCGGAGTTCATGGGTTGCCCCTTCTCCGAGGAGGAGGTGGCGGGAGGGGTGGTGG
AGGAGATCGTGGACCTGTGCAGCCTGGAGAAGCTGAAGAACATGGAGGCCAACAGGGACGGG------CGGTGGAACGTG
TCGGGCATCAGGAGCGACGCTTTCTTCCGGAAGGGGGTCGCCGGAGACTGGAGCAGGCACATGTCGCCGGAGATGGGGAA
GATGCTGGACAAGACCGTGGAGGACGCGCTCCAGGGATCTGGGTTCAGCTTCGCGGGCTCAGCTCCGGCGAGCCACTAAC
CACGGGTGGTACTGCGA--CAAACAACAATACCATTGACAAGCACGGCTTGGAAGTTGGAACAC----GTGATCCATGGA
TTTGAGGCGCGAGTTTGAATTCCAGTTTCTTGCTTCAAAGTTGATTATCTTGCAA---GTTTAAGCAGTAGTTTGATAAC
TCATTTCAAATGTTTCTTTCTAAAATTTCCGAATCATT------------------------------------------
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>chr1B_1188
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----------------------------------------------------------------------------ACGA
CGACATGGCCGAGCTCGTGATCTCCTCGCTCCCGCTCGAGACGCGGTGCCCGCCGTACCCCCTCAGGCAGCACGGCGGCT
TCTGGTTCTCCGAGCCGTTTCTCCCG---GCCGTCGCGGCCGCCCGCGCGCGGTTCGAGGCCAGGCCGTCCGACGTCCTC
CTCGCCAGCTTCCCCAAGTCCGGCACCACCTGGCTCAAGGCCCTCGCCTTCGCCACGCTCCACCGCGCCGACCACCCGCC
GCGCGGCCT---CGACCACCCGCTCCGCCGCCGTAACCCCCACGACTGCGTCGAGTTCCTCGAGGAGGCATTCGCGTCTC
CGGCGGCGA-----------------------------------------------------------------------
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------------------------AGGACAGCGGCGGTGACGTGCTCGCGGCGCTCCCTTCGCCGCGCCTGATCGCCACC
CACCTGCCGTACACCCACGTGCCGAAGAGCGTGACCACCGAGGGCACCGGGTGCAAGATTGTGTACGTCTGCCGCGACCC
CAAGGACGCGCTCGTCTCCAAGTGGCAATTCACCAAGAAGAGATTGGCGTTCGCCGCGGCAGCTCCAGATAATCCACCGA
AGCCATGCACAGTCGATGAGATGTTCGAGCTCTTCTGCGACGGTCGGTGCACCTACGGCCCTCAGTGGCACCATGTGCTC
GGCTACTGGGAGGCGAGCCGGAGGCAGCCGGAGA---------AGGTGCTCTTCCTCCGGTACGAGGAGATGCTCCGGGA
CCCGGTGGGCAACGTGAGGAAGCTGGCGGAGTTCATGGGGTGTGTGTTCTCCGGGAAGGAGGAAGCGGCGGGGGTCGCGG
AGGACGTCGTGGAGCTGTGCAGCATGGACACTCTCAAGAACATGGAGGTGAACAAGAATGGC------ACGCAAAAC---
---AGCGTCAAGAATGAGGCTTTCTTCCGGAAGGGCGTGGCTGGGGACTGGAGCAACCACATGACACCGGAAATGG----
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>chr4B_1209
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-----------------TGCCGG---AGCTGCCGCTGGAGACGCGGTGCCTGCCGTTCGCGCTGCGCCAGTACGCCGGCT
TCTGGCTGCCGGAGGCGGTGCTGGCGCGCGGCCTCCCGGCGGTGCGCGACCGCTTCGCGCCGAGGCTCGACGACGTGCTC
CTCGCCAGCTTCCCCAAGTCCGGCACCACCTGGCTCAAGGCCCTCGCCTTCGCCACCGCGCGCCGTGCCGTGCACCCGCC
GTCCGACCA---CGACCACCCGCTCCGCCACGGCAACCCGCACGACCTCGTCCCGTTCCTCGAGTTTGGCTTCACGCTCG
CCTA----------------------------------------------------------------------------
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---------------------------------------CGACGCCGACGCCCTGGCGGC--------------------
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----------------------------------------CGGCCTCGAGGCGCTCCCTTCCCCGCGCCTGCTGGCCACG
CACCTGCCCTTCTCCCTCCTCCCCGGCCGCCTCGCCGCCGCCGGC------CG---CATCGTCTACGTCTGCCGGCACCC
CAAGGACGCGCTCGTCTCAGCCTGGACCTTCACCAGGAAGGCGTCGGGGAGCATGGGCGTGGACGCGGAGTCCTACTCGC
TCCGGGAGGC------------CGTGGAGCTCTTCTGCGCGGGGCGCTGCGTAGCCGGCCCGCAATGGCGGCACGTGGTC
GAGTACTGGGAGGCGAGCCTCAGCCGTCGGAAC------------GTGCTGTTCCTCAGGTACGAGGAGATGCTCCGCGA
CCCCGTGGGGAGCCTGAGGACGATGGCGGGGTTCATGGGGTGCGCCTTCTCGCCGGGGGAGGAGGAGCGAGGCGTGCCGC
AGGCCATCGTGGAGCTGTGCAGCCTGGAGAAGCAAAAGAATGTGGAGGCGAGTCGGGACGACGGAAGGACGGCAGAT---
---GGCATCAAGGCCGACGCCTACTTCAGGAAGGGGGTGGCCGCGGATTGGAGCAGCCACATGACGCCGGAGATGGGGAA
GATGGTGGACGAGGCTGTGGAGGACGGGCTCCGGGGGTCTGGTTTCACCTTCGCCGACTCAACTCCGGC-----------
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>chr1D_1215
GCTGC---------------------------------------------------------------------------
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--------------------------------CGCTGGAGACGCGGTGTCCGCCGACGCCGCTCAGACAGTACGGCGGCT
TCTGGTGGCCCGAGCCGATCCTCCCG---GGAGTCCTGGCCGCGCGCGCGGGGTTCGAGCCGAGGCCGTCGGACGTCTTC
CTCGCCAGCTTCCCCAAGTCCGGCACCACCTGGCTCAAGGCCCTCGCCTTCGCCGCGCTCCACCGCGCCGACCACCCACC
GCGCGCCCC---CGGCCACCCGCTCCGCCGCCGCAACCCGCACGACTGCGTCGAGTTCCTGGAGGGGCTCTTCGCGCTCT
CGCCGTCGCCGGTCAAAGGCGGAGACGTGTTCGCGGCGCACCCGTCGCCGCGCGTCATCGCCACCCACATCCCCTACTCG
CTCCTGCCGGAGCGCGTCACCGCGGAGGGCGCCGGATGCAAGGTCGTGTACGTCTGCCGCGACCCCAAGGACGCCTTCGT
CTCCACGTGGATGTTCGCCAACAAGATGGTGGAGGCCGCCGCCGACAACAATGGCGACTCGCCGCCACCTCCAGCGCCGT
TCACGATCGAGGACGCGTTCGAGCTCTACTGCCATGGTCGGTCCATGGGCGGCCCGCAGTGGCACCACGTAGCCGGCTAT
TGGGAGGCGAGCAGGAGGCGGCCCGGGAAGGTGCTCTTCCTGCGGTACGAGGACATGCTTCGGGACCCGGCGGGCAACGT
AAGTAAGCTGGCCGAGTTCATGGGGTGCGCGTTCTCCGCCGAGGAGGAGGCCGCGGGGGTGGTGCGGGACATCGTGGAGC
TGTGCAGCATCGACGCCTTGAAGAACCTGGAGGCGAACAAGGACGGTGGTCAATCGTACGTGAAGAACGAGTCCTTCTTC
CGGAAGGGGGTCGCCGGGGACTGGAGGAACCACATGACGCTGGCGATGGCTGTGCGGCTGGACAAGATTGTCGAGGATGC
ACTCCAAGGGTCGGAGTTCACCTTCAACACCATGGCCGACCGGTAGGCCGGCAGGGACGATCGATGTTGAGAAACTAGCA
CGGCCGGGCCGGCTGGTCCATGAACACAAGGAGTGAAGCCAGCAGAAGGAATGTCGATGTTCAGTTGTGTTCATGTAAGG
GTAAAAACTATACAAGCTGGCAGCCAAAGCTCAAGTAAAATAACGATGGCATAATTAAGGAATCATACCGTTAAACACTA
TCGAGCCGTTACTGGAATTCAAAGCTTCGTGCAGATAAACTAATATTTGAAGCTGGGAATCGCGTGGTCAGCTATCTATA
TAAAAGAACGTAAACAGCCGGCCGATGTACAATGCCAGAGAGAGAGGCACCAAATGCAGCTATCGCAGGGATCAATGGCC
GCGTCGGGAGACGACGACATGGCCGACCTCGTGATCTCCTCGCTCCCACTCGAGACGCGGTGCCCGCCCTACCATCTCAG
GCAGCACGGCGGCTTCTGGTTCTCCGAGCCGTTTCTCCCGGCCGTCGCGGCCGCCCGCGCGCGGTTCGAGGCCAGGCCGT
CCGACGTCCTCCTCGCCAGCTTCCCCAAGTCCGGCACCACCTGGCTCAAGGCCCTCGCCATCGCCACGCTCCACCGCGCC
GACCATCCGCCGCGCTCCCTCGACCACCCGCTCCGCCGCCGTAACCCCCACGACTGCGTCGAGACTCGAGTACCTCGAGG
AGGCCTTCGCGTCTTTGGTGGCCGAGGACAGCGGCGATGACGTGCTCGCGGCGCTCCCTTCGCCGCGCCTGCTCGCCACC
CACCTGCCGTACACCCACGTGCCGAAGAGCGTGACCACCGAGGGCGCCGGGTGCAAGATTGTGTACGTCTGCCGCGACCC
CAAGGACGCGCTTGTCTCCAAGTGGCTATTCACCAAGAAGAGATTGGCGTTCGCGGCGGTTGACGACAGC---CCGCCCA
AGCCATACACAATCGATGAGATGTTCGAGCTGTTCTGCGACGGCCGATGCACCTGCGGCCCGCAATGGCACCACGTCCTT
GGCTACTGGGAGGCGAGTCGGAGGCAGCCGGAGA---------AGGTGCTCTTCCTCCGGTACGAGGAGATGCTCCGTGA
CCCGGTGGGCAACGTGAGGAAGCTGGCGGAGTTCATGGGGTGCGCGTTCTCCGTCGAGGAAGAGGCGGCCGGGGTCGCGG
AGGAAGTCGTAGAGCTGTGCAGCATGGACACTCTCAAGAACATGGAGGTGAACAAGAATGGC------ACCCAAAACCA-
-----CGTCAGGAATGAGGCTTTCTTTCGGAAGGGCGTAGCCGGGGACTGGAGCAACCACATGACACCGGAAATGGCGGC
ACGGCTGGACAAGATCGTGGAGGATGCGCTACGAGGGTCGGGCTTCGCCTTC----------------------------
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>chr5A_1398
--------------------------------------------------------------------------------
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-------------------------------------------------TCGCCACCGCGCGCCGCGCCGCGCACCCACC
GTCCGCCCA---CGACCACCCGCTGCGGCAGCGCAACCCGCACGATTGCGTCCCGTTCCTCGGCATCGGCTTCGCCCTTG
ACAA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------GGACGTCGACACCGTGGCGGC--------------------
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----------------------------------------CGAGCTGGAGGCGCTCCCTTCCCCGCGCGTGCTCGCCACG
CACCTGCCCTTCTCCCTCCTCCCCACTGGTCGGAG---------------CCG---GGTCGTGTACGTCTGCCGGGACCC
CAAGGACGTGCTTGTCTCCTGCTGGCTCTTCACTAGGAAT--GTCAGAGAGCGTCGGCGTCGACGCGGAGTCCTTCTCGC
TCCGGGAGGC------------CATGGAGCTCTTCTGTGCGGGACGCTGCATGTACGGCCCGCAATGGCTGCACGTCGCC
GAGTACTGGGAGGCGAGTCGCCGGGCCGCT---------GGTGAGGTGCTGTTCCTCAGGTACGAGGAGATGCTCCGCGA
CCCCGTGGGGAGCCTGAGGACGATGGCGGAGTTCATGGGGTGCGCCTTCTCCCCGGAGGAGGAGGAGCGCGGGGTCGCGC
GAGCCATAGTGGAGCTGTGTAGCCTGGACAAGCTCAAGAAAGTGGAGGCCAACAGGAAGGGG---AGGACGGCAGCA---
---GGCACCAAGGCCGACGCCTACTTCCGGAAGGGGGTGGCCGGGGATTGGAGCAGCCACATGACGCCGGAGATGGGGAA
GATGGTGGACGAGGCCGTGGAGGACGGGCTCCAAGGGTCTGGTTTTAGCTTCACCGACTCAACTCCGGC-----------
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--------------------------
>chr5B_1756
GCAT----------------------------------------------------------------------------
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----------------------------------------------------------------GTGGCGGCACATGCTC
GAGTACTGTGAGGCGAGCCGCCGCCGCTCCGGTGGCGGGGGTGAGGTGTTGTTCCTGAGGTACGAGGAGATGCTGCGCGA
CCGGGCGGCGAACCTGAAGACGATGGTGGAGTTCATGGGATGCGGCTTCTCCGAGGAGGAGCTGGCGCGAGGGGTGGTGG
AGGATATCGTGGATCTTTGTAGCATTGAGAAGCTCAGGAACATGGAGGCCAACAGGGACGGG------CGGCAGAACGTG
TCGGGCATCAGGAGCGACGCTTTCTTCCGGAAGGGGGTCGTCGGGGACTGGAGCAACCATATGTCGCCGGAGATGGGGAA
GATGCTGGACGAGATCGTGGAGGACGCGCTCCAGGGGTCTGGGTTCAGCTTCGCGGGCTCAGCTACGGCGAGCCACTAAC
CACGGGTGGTACTGCGA--CAAACATCAATACCATTGACAAACACGGCTTGGAACACATGT-TTTGTGGTGATCCATTGA
TTTGAGGCGCGAGTTTGAATTCCAGTTTCTTGCTTCAAAGTTGATTATCTTGCAA---GCTTAAGCAGTAGTTTGATAAC
TCATTTCAAATGTTTCTTTCTCAAATTTCCGAATCATTCCAGTTCTACAATTTCAGTCATCATTTAGCAC--TATTTAAG
TACAATTCCGAGAATTTT--------------------------------------------------------------
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--------------------------
>SNPs
----------------S-S------------------S--S------------------------------S--------
--------------------------------------------------------------------------------
-------------------S------------------------------------------------------------
-------------------S------------------------------------------------------------
--------------------S-S---------------------------------------------------S-----
------------------------S-S------S-----------------SS---------------------------
---------S-----------------S---------------S--------------------S--------S------
--------------------------------------------------------------------------------
-------SS-------------------------------------------------S---------------------
---------S--------------S----------------S------S--S-S---SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S-------------S-----------------
--------------------------------------------------------------------------------
-------------------------------------------S--------------S-----S---------------
--------------------------------------------------------------------------------
S---------------------------------------------------------S----------SS---------
--------------------------------------------------------------------------------
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----------------------------------------S--------S------------------------------
--------------------------------------------------------------------------------
---------S-----S----------------------------------------------------------------
--------------------------S-----------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
----------------SS-----------------------------------------S--------------------
------------S------------------------------------------------S-----------S------
-----------------S------S------------------------------SSS----------------------
-----------------------S----------------------------------------------S--------S
----------SS-S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_862
--------------------------------------------------------------------------------
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------------------------------------------GCACTCTCTGCATCGATCGA------------------
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--------------------------
>reverse_4240
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------A
TTTGTCCCGGTTGGTGAGG-------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------
