>input_sequence_59388
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------------ATGATGATGGTGGACACGGTCAGCGCCAGCACCTCCTTCATCGCGCGCCACCCCTTCGACCACCACCG
GCCCCGC------CGGACGCTGCTCCACGTCGTCAGCTGCCGCCCCCTCCGCACGCCCTTCGCGGGCCGCCGTCTCGTGG
CCCGGGTGCCCAGGCCGGAGCG------GCAGCGGCTCGCGGACTGGCCCGTCAGGGCGCTGGCAGCCGTCGGGTTCACC
AAGGAGGCCGTCCCGCGGAAGGAGTTCCGGGGGATCCCCGGGGACGGCGACAACGGATTAAGGACCGACGACGACGCCCC
CCCAGCGGCGACGCCGTCCTGGCCACCGCGGAACAGGGCGGACGACCCCAGCCTGCACAACCCGCTGCTGCGTCTCGAGC
GGATGGGCTGTGGCTGGGTCGGCGTCATCTTCGAGTGGGAGGGCGTGGTGGTGGAGGACGACACGCGGTTGGAGCGGCAG
GCGTGGCTGACCCTTGCCGAGGAGGAGAGCAAGTCGCCGCCGCCCGCGTTCGTCCTCCGGCGGGTCGAGGGGATGAAGGC
AGAGCACGCCGTCTCCGAGGTGCTCTGCTGGTCCCGGGACCCCTCTGAGCTGCGGCGCCTGGCGGCCCGCAAGGAGGAGA
TCCATGGCGGGCTCCGCGGCGCCGCCAGCCAGATGCGGGACGGGTCGAGGGAGTTCATGAGCACGCTGGTCAACTACAAG
ATCCCCCTCGCCGTCGCCTCCACGAGGCCCCGCAAGGCCGTGGAGGCGGCCATCGAGGCCGTCGGCGCGCGTGGGTTCTT
CGACGCCGTGGTGGCGGCGGAGGACGTGTACCGGGGCAAGCCCGACCCGGAGCTGTTCCTCTACGCCGCGCAGCTGCTGG
GCTTCATCCCCGAGCGCTGCGTCGTGTTCGGCAACTCCAACTCTGCCGTGGAGGCCGCGCACGACGCCCGCATGAAGTGC
GTGGCCGTCGCAAGCAAGCACCCCGTCTACGAGCTCGGAGCCGCCGACCTTGTTGTGAAGCGGCTCGATGAGCTCTCCAT
TGTTGACCTCAAGAACCTCGCCGACATCGACTCCCCTGAGTTTGGCATGGAGCCTGAGCCGGAGATGGAGGAGGAGGAGG
ACGAGGCGCCACCGTCGACCGCCGTGGGTGTCGACGATATATTCTTGTAG------------------------------
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--------------------
>chr4A_1_TraesCS4A01G307800
ACAAGTTGGTATCAGAGCCAATCCTCTGATACCAACTTTTGCCCAAAGGATGACAAAGCTTTGCAGCGCCTAAAGGTTTT
GCAAAGTTTTGCTGTTGACGCATGGGTTGCAGACGCGGTTTTTTCCGGTGGAGCAACGGATTTTCCTTGAGTTACATTAT
ATATTGATTGCGTAGGTGGTCTGGACGAGATGGATTATAGCCACTCGTAGCATTTTTAGATTTAATTATAATTGTAATAA
TGATATAAATAATAATAAAGAAGGAAAAAGATGGTAGGAAGCCGCCGGGTAATTCCTGGGCCGCGGGAGGCGCCACCTCC
GCCTCTCGTTTGGGCGACGTGGCGCGCATCGGGCGGGGACTCGTCTCGCCTTCCTCCTCCACCACCACCACCGGACGAGA
AACAGAGAGGGCCAATAGAAAAATCCCCTCTTT---TCCATCAATCAATCGCGTGGAGGAAAAGA-GAGGAAGAAGGAGG
AAGGAACCGACGAACCACAAGCTAATCCTCTCCCCTCCGCTCCAATCCTCGCCG--------CCTCCCTCGCCGGGACGC
TACGCCACGGTACGGTACGGTGCG--CCGCCTCTTCT---TCCCCCTTATCCCCTCCCCTCCTCTC-----GGAGAGGAA
CCGGCCCAACCCAACGCAACCGAATCGAATCCGGGGGAGGGGCGGCTGTTCATCTATAGATAGATTGATTGGT-------
--CCCAAATCGA---------------------------------------ATCCTTCT---------------CGTTGA
TTAGGAGGAGGATTAGGTGCTCTGTTTTCGTTGCCGCGGTTGGTTCCGCCGTTGCTCTCTTTTGTTCGCTTCCTGCCATG
G-------------TTTCCTGTCTTCTTCCTCCCGCGGATTGGGGTTCTGACTCCTGACCGGTCTCCCTC---TCCTTCT
TCTTCTTGCAGCGCGGGATCAGCAATAAAGCAGAGGAATTTCG---------------GGCGGAGGAGCTCAGGGATCTC
GTTGCTCCTTCTTCTACTTCTTCTTCTTGA----TTGATCGGCTGGTAGGCGCGCGGGC------CGGGCGGATCCAGCG
G------CAGCCATGATGATGGTGGACACGGTCAGCGCCAGCACCTCCTTCATCGCGCGCCACCCCTTCGACCACCACCG
GCCCCGC------CGGACGCTGCTCCACGTCGTCAGCTGCCGCCCCCTCCGCACGCCCTTCGCGGGCCGCCGTCTCGTGG
CCCGGGTGCCCAGGCCGGAGCG------GCAGCGGCTCGCGGACTGGCCCGTCAGGGCGCTGGCAGCCGTCGGGTTCACC
AAGGAGGCCGTCCCGCGGAAGGAGTTCCGGGGGATCCCCGGGGACGGCGACAACGGATTAAGGACCGACGACGACGCCCC
CCCAGCGGCGACGCCGTCCTGGCCACCGCGGAACAGGGCGGACGACCCCAGCCTGCACAACCCGCTGCTGCGTCTCGAGC
GGATGGGCTGTGGCTGGGTCGGCGTCATCTTCGAGTGGGAGGGCGTGGTGGTGGAGGACGACACGCGGTTGGAGCGGCAG
GCGTGGCTGACCCTTGCCGAGGAGGAGAGCAAGTCGCCGCCGCCCGCGTTCGTCCTCCGGCGGGTCGAGGGGATGAAGGC
AGAGCACGCCGTCTCCGAGGTGCTCTGCTGGTCCCGGGACCCCTCTGAGCTGCGGCGCCTGGCGGCCCGCAAGGAGGAGA
TCCATGGCGGGCTCCGCGGCGCCGCCAGCCAGATGCGGGACGGGTCGAGGGAGTTCATGAGCACGCTGGTCAACTACAAG
ATCCCCCTCGCCGTCGCCTCCACGAGGCCCCGCAAGGCCGTGGAGGCGGCCATCGAGGCCGTCGGCGCGCGTGGGTTCTT
CGACGCCGTGGTGGCGGCGGAGGACGTGTACCGGGGCAAGCCCGACCCGGAGCTGTTCCTCTACGCCGCGCAGCTGCTGG
GCTTCATCCCCGAGCGCTGCGTCGTGTTCGGCAACTCCAACTCTGCCGTGGAGGCCGCGCACGACGCCCGCATGAAGTGC
GTGGCCGTCGCAAGCAAGCACCCCGTCTACGAGCTCGGAGCCGCCGACCTTGTTGTGAAGCGGCTCGATGAGCTCTCCAT
TGTTGACCTCAAGAACCTCGCCGACATCGACTCCCCTGAGTTTGGCATGGAGCCTGAGCCGGAGATGGAGGAGGAGGAGG
ACGAGGCGCCACCGTCGACCGCCGTGGGTGTCGACGATATATTCTTGTAGGAGGAGACTCAGGAGCCGCCGGTATGTATG
TACATTTGATTTGGG-TTGGCCCTTCTCCTGCTGCACGTGTGTATGATGGATAATTCATGATAGCGATCAGGAAGGAAGG
AAGGGCTTTATTATCTATCCTTCTAATCCGTGTTAGGTTGTGTTATGTACATGGAATGTATCTTTAGAACTCACACAAAC
TGTATATATACTTGGAAAAAAAATGGGTACTATATATACGTCGGTGCATCTGAACTGCATTACCTTCCTGGTGTGGATGG
TGTAATAGCTCAGA---AGAAGGAACATATGTTTATTTGCAGTGAATAACAGAACTACATATGCTACTTGTTCCTACTTT
TGAGCAGTAATCTCGTTCGCTTTAGGTCTTTTATACGAAACCAAAGAGTCTTGCATTGCTTTTGATTTTGAGGATCCAAC
GAATATCTATTCCTGCGTGATGATGTTCTGTTGATCGGAATTCTATAAGACACACTGAACGTTAGTCTCACGGATGGTGG
GTCTGTTTGCAAAAGAAAACGCAATGTATTGTTTCCTCTTTGGTAAAATGAGAAGGTCCTTGTACTCTTTGGAAGAATTA
CATATGTTAACTGGTTGTTGCCTGCTCTGTTTCCTGCTTGGAGCAGCAATTTTTTTCGC------TTTTATCTGATGGAA
AGAAGTGTTCCAATTGCCTGGGATAGATTTTGTGGGTCCAATGAGTATTATTCCTGTGTGATGATGTGCTGTTGATCAGA
ATTATGTTCTTACTTGCAAGGGTATATTATCAAGATCTCCCATTGTTGTTTACAATTTTGGGGATCCACTGAAATGTTAA
TCATGTCTGTGGTGTATTCTTAGCTAGAATCCTGAATCACGAGTGAATTACACCTGTTACTGCCGCCTGCTATACTAGTA
TATATTTTCCTACTTGAAACAGGAATTGTTTTCCCTTAATTCATGGGACGAAAAGGTCTCCAATTTCTTTGTATTTTCGA
GGAACCCACAAGTATTTGTA
>chr4D_79
------------------------------------------------------------------------------TT
GCAAAGTTTTACTGTTAACGTATGGGTTGCAGACGCGGTTCTTGCCGTTC--------------CCTTGAGTTACATTAT
ATATTGATTGCGGAGGTGCTCTGGGCC--ATGGATTATAGCCACTCGTAGCATTTTTAGATTTAATTATGATTATAATAA
TATATA----AATAATAAAGAAGAAAAGAGGTGGGCAGCCGA---CTGGTAATTCCTGGGCCGCGGGAGGCGCCACCTCC
GCCTCTCGTTCCGGCGACGTGGCGCGCATCGGGCGGGGACTCGTCTCGCCCTCCTCCTCCACCACCACCACCACGGGAGA
AACGGAGAGAGCCAATAGAAAAATCCTCTCTTTCTTTCTATCAATCAATCGCGTGGAGGAAAAGA-GAG-AAGAAGGAAC
AAGGAACCCTCTCCGGTTCGTCGCCTGCT--TCCTTCC---CCAATCCTCGCCGCTTCCCTCCCTCCGTCGCCGGGACGC
CACGGTACG-----GTACGGTGCGCGCCACCTCTTCCCCACCCCCCTTATCCTCTCCCCTCCTCTCCCCCCGGAGAGGAA
CCGACCCAACCGAATCGAATCCAGGGGA-----GGGGAGGGGCGGCTGTCCATCTATACATAGATAGATTGGTCCAAGAA
TCCCCAAATCGAATCCATCCTCTTTGCTTTGGTTTATTTCTTTCTTTGTTTATCCTTCT---------------CGTTGA
TTAGGAGGAGGATTAGGTGCTCTGTTTTCGTTGCCGCGGTTGGTTCCGCCGTTGCTCTGTTTTGTTGGCTTCCTGCCATG
GATTCTTCTTTACCTTTCCTGTCTTCTTCCTCCCGCGGATTGGGTTTCTGGCTTCTGACCGGCTTCCTTCTCCTT-TTCT
TCTTCTTGCAGCGTGGAATCAGCGATAAAGCGGAGGAATTTGGGCGCAGGAAGGATTTGGCCGGCGGGCTCCGGGATCTG
GTCGTTTG-----GTCATTCTTCTTCTTGTTGATTTGATCGACTGGTAGGTGGGCGGATCCACAAG---------CAGCG
G------CAGCCATGATGATGGTGGACACGGTCAGCGCCAGCACCTCCTTCATCGCGCGCCACCCCTTCGACCACCACCG
GCCCCAC------CGGACCCTCCTCCACGTCGTCAGCTGCCGGCCCCTGGCCACGCCCTTCGCGGGCCGCCGCCTCGTGG
CCAGAAGGCAGCCGTCGCTTCCTGCGCAGCAGCGGCTCGCGGACTGGCCCGTCAGGGCGCTCGCGGCGGTGGGGTTCACC
AAGGAGGCCGTCCCGCGCAAGGAGTTCCGGGGGATCCCAGGGGACGGCGACAACGGATTAGGGACCGACGACGACGCCCC
CCCAGCGGCGGTACCGTCATGGCCGCCGCGGAACAGGGCGGACGACCCGAGCCTGCACAACCCGCTGCTGCGCCTCGAGC
GCATGGGCTGCGGCTGGGTCGGCGTCATCTTCGAGTGGGAGGGCGTGGTGGTGGAGGACGACACGCGGCTGGAGCGGCAG
GCGTGGCTGACCCTGGCCGAGGAGGAGGGCAAGTCCCCACCCCCGGCGTTCGTGCTGCGGCGGGTCGAGGGGATGAAGGC
CGAGCACGCGGTCTCCGAGGTGCTCTGCTGGTCCAGGGACCCCTCGGAGCTGCGGCGCCTGGCGGCCCGCAAGGAGGAGA
TCCACGGCGGGTTGCGCGGCGCCGCCAGCCAGATGCGGGACGGGTCGAGGGAGTTCATGAGCACGCTGGTCAACTACAAG
ATCCCCCTTGCCGTCGCCTCCACGCGGCCCCGCAAGGCCGTCGAGGCGGCCATCGAGGCCGTCGGCGCGCGGGGCTTCTT
TGACGCCGTCGTGGCCGCGGAGGACGTGTACCGGGGCAAGCCTGACCCGGAGCTGTTCCTCTACGCCGCGCAGCTGCTGG
GATTCATCCCCGAGCGCTGCGTCGTGTTCGGCAACTCCAACTCCGCCGTGGAGGCCGCGCACGACGCCCGTATGAAGTGC
GTCGCCGTCGCGAGCAAGCACCCCGTCTACGAGCTCGGCGCCGCCGACCTTGTTGTCAAGCGCCTCGATGAGCTGTCCGT
GGTTGACCTCAAGAACCTCGCCGACATCGACTCCCCCGAGTTTGGCATGGAGCCCGAGCCGGAGATGGAGGAGGAGGAGG
ACGAGGCGCCACCGTCGACCGCCGTGGGAGTCGACGATATATTCTTGTAGGAG---ACCCAGGAGCTGCCGGTATGTATG
TACATTTGATTTGGAATTGGCCCTTCTCCTGTTGCACACGTGTATGATGGATAATTTGCGGTAGCGATCAGGAAGGAAGG
AAGGGCTTTATTATCTATCCTTCTAATCCGTGTTAGGTTGTGTTATGTACATGGAATGTATCTTTAGAACTCACACAAAT
TGTATATATACTTGGAAAAGAAAAAAGAGGGTACTTGATACGTATACGTCAG---TGCATTG-CTTCCAGATGTGGAAGG
TGTAATAATTATAACTCAGAAGGAACATATGTTTATTTGCAGTGAATGG-----AAAAAC--------------------
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-------------------------------------------------------------------------AGAATTA
CATATGTTATCTGCTTGTTGCCTGCTCTGTT-CCTACTTGGAGCAGCAAAATTGTCTTAGCTTCTTATCATCAGACGAAA
ACAAATCTTCCACATGTCTCTCGTGTGATGATGTATATG---------TATTCCTGTGTGATGATGTGCTGTTGATCAGA
ATTCTGTTCTTTCTTGCAAGGGTATATTATCAAGATCTTCCACTGTTGTTTAGAGTTTTGGGGATTCAACAAAATCTTAT
TTATGTCTGTGTTGTATTTTTGGCAAGAATCTTGAATAACCACTGGATTGCATATGATACTTGTTGCCTGCTA-----TA
TATGTGTTCCTACCTGTAACAGCAATTGTTTTCCCCTAATTTATGGAACGAAAAATTCTCCCATTGCTTTGGATCTT---
--------------------
>chr4B_204
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-------------------------------------------CTCGTAGCATTTTTAGATTTAATTATAAATTG-----
TGATATGAATATGAATAAAGAAGAAGAAAA--GGTAGGAAGCCTCCTGGTAATTCCTGGGCCGCGGGAGGCGCCACCTCC
GCCTCACATTCGGGCGACGTGGCGCGCATCGGGCGGGGACTCGTC------------TCCACCACCACCACCA-------
-----------CCAATAGAAAAATCGA---------TCAATCAATCCATCGCGTGGAGGAAAAGAAGAG-ACCAAGGAAG
AAGGAACCGACGAAGGAAGGAGAAGCTAAGGTCCATCC---CCGATCCTCGCCG--------CCTCCGTCGCCGGGACGC
CACGGTACGATACGGTACGGTGCGTGCCACCTCTTCT---CCCCTCTCATCCTCTACCCTCCGCTCCTCTCGGAGAGGA-
---ACCCGACCGAATCGAATCCAGA----------GGAGGGGCGGCTGTCCATCTATAGATAGATAGATTGGTGCAAGAA
TCCCCAAATCGAATCCATCCTCTTTCCTTTGGT----TTCTTTCTTTGTTTGTCTGCTAGGCTGCCTGCCTCCCCGTTGA
TTAGGAGGAGGATTAGGTGCTCTGTTT-CGTCCCCGTGGTTGGTGT--CCGTTGCTCTGTTTTGTTCGCTTCCTGCCATG
GATTCTTCTTTGCCTTTCCTCCCTTCTTCCTCCCGCGGATTGGGTTTCTGAATTCTGACCGGTCTCCTTCTCATCCTTCT
TCTTCTTGCAGCGTGGAATCAGCGATAAAGCGGACGAATTTCG---------------GGCGGAGGAGCTCAGGGATCTC
GTCGTTTG-----CTCCTTCTTCTTCTTGA----TTGATCGACCGGTAGGTGGGCGAGGCGAAGGCGGGCGGATCCAGGA
GCGGCATCAGCCATGATGATGGTGGACACGGTCAGCGCCAGCACCTCCTTCATCGCGCGCCACCCCTCCGACCACCACCG
GCCCCGCCGGCCGCGGACCCTCCTCCACGTCGTCAGCTGCCGGCCCCTCGCCACGCCCTTCGCGGGCCGCCGCCTCGTGG
CCCGGGTGCCCAGGCCGGAGCG------CCAGCGGCTCGCGGACTGGCCCGTCAGGGCGCTGGCCGCCGTCGGGTTCACC
AAGGAGGCCGTCCCGTGGAAGGAGTTCCGGGGGATCCCAGGGGACGGCGACAACGGATTAGGGACCGACGACGCCGCACC
CCCAGCGGCGGTACCGTCGTGGCCGCCGCGGAACAGGGCGGACGACCCGAGCCTGCACAACCCGCTGCTCCGGCTGGAGC
GCATGGGCTGCGGCTGGGTCGGCGTCATCTTCGAGTGGGAGGGCGTGGTGGTGGAGGACGACACGCGGCTCGAGCGGCAG
GCGTGGCTGACCCTGGCCGAGGAGGAGGGCAAGTCCCCACCCCCGGCTTTCGTCCTGCGGCGGGTTGAGGGGATGAAGGC
GGAGCACGCGGTCTCCGAGGTGCTCTGCTGGTCCCGGGACCCCGCGGAGCTGCGGCGCCTGGCGGCACGCAAGGAGGAGA
TCCATGGCGGGCTCCGCGGCGCCGCCAGCCAGATGCGGGATGGGTCGAGGGAGTTCATGAGCACGCTTGTCAACTACAAG
ATCCCCCTCGCCGTGGCCTCCACAAGGCCCCGCAAGGCCGTCGAGGCAGCCATTGACGCCGTCGGTGCTCGGGGCTTCTT
CGATGCCGTGGTCGCTGCGGAGGACGTGTACCGGGGCAAGCCCGACCCCGAGCTGTTCCTCTACGCCGCGCAGCTGCTCG
GCTTCATCCCCGAGCGCTGCGTCGTGTTCGGCAACTCCAACTCCGCCGTGGAGGCCGCGCACGACGCCCGTATGAAGTGT
GTGGCCGTCGCGAGCAAGCACCCCGTCTATGAGCTCGGCGCAGCCGACCTGGTGGTCAAGCGGCTCGACGAGCTGTCCGT
GGTTGACCTCAAGAACCTCGCCGACATCGACTCCCCCGAGTTTGGCATGGAGCCCGAGCCGGAGATGGAGGAGGAGGAGG
ATGAGGCGCCACCATCGACCGCGGTGGGCGTCGACGATATATTCTTGTAGGAGGAGACTCATGAGCCGCCGGTATGTATG
TACATTTGATTTGGG-TTGGCCCTTCTCCTGTTGCACATTTGTATGATGGATAATTTGCGATAGCGATCAGGAAGGAAGG
AAGGGCTT-ATTATCTATCCTTCTAATCTGTGTTAGGTTGTGTTATGTACATGGAATGTATCTTTAGAACTCACACAAAC
TGTATATAT----------------------------ACGTTGGTGCATCTGAACTGCATTG-CTTCCAGATGTGGATGG
TGTAATAACTCAGA---AG--GGAACATATGTTTATTTGCAGTGAATGAAAAGAAAAAAC--------------------
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-------------------------------------------------------------------------AGAATTA
CATATGTTAACTGCTTGTTGCCTGCTCTGCTTCCTGCTTGGAGCAGCAATTCTTTTTGC------TTTTATCAGACGAAA
A-AAGTGTTGTAATTGCATTGGATAGATTTTGAGGGTCCAATGGATATTATTCCTGTGTGATGATGTGCTGTTGATCATG
ATTATGTTCTTACTTGCATGGGTATATTATCAAGATCTTCCACTGTTGTTTAGAATTTTGGGGATCCGTCGAAATTTTAT
TTATGTC-------------------------------------------------------------------------
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--------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
----------S-----S---S-------------------S--S---S-SSSSSSSSSSSSSSS----------------
------------S-----S-----S-SSS--------------------------------------------S------
------S----------------S------S------------S--S---------------------------------
----------S---------------------------------------S---------------------SSSS----
---S-----S----------------S-----------S------------------------------S--------S-
--------------SS-SSSS-S-S-S--SSS--S---SSS--------------------------S------------
S---SS---S------------------S-----------S-----------S---------------------------
---S-------S--SSS--S-S-SSS--SSSSS----------------S---------------S--------------
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----------------------------------------------------------S---------------------
--------------------------------------------S--------S-------------S------------
-------------S--S------S-------S------------------------------------------------
--S-S-SSSSSSS--S-------------------------S--------S-S-----S---------------------
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------------------S--S--------------------S------SS---------------------S-------
----------------------------------------------------------------S---------------
--------------------------------------S---------------------S-------------------
----------SSS-----S-----S-----------------------S-----------------------S-------
-S--------S---------------------------------------------------------S-----------
--------------S------------S-------S--S--S--S-----------S-----------------------
S--------S-----------------------------------S----------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S-----------------------------S--S-----
---------------S----------------------------------------------------------------
-------------------------------------------S--------------------------S---------
-----------S--------------------------S-----------------S-----------------S---S-
S-----------------------------------S-----------------S-------------------------
----------------------------S---------------------------------------------------
-------------------------------S-----S------------------SSS---------------------
--------------------------------------------------------------------------------
-------------------S---SSS-SSSSSSS-SS----S-------------------SS-----S-S---------
-------S---------------------------------------S-S-SS-SS-S-SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
-------------S------------------------------------------S---------------S--S-S--
-S-----------------S------------S----------SS-----------------------------------
--------------------------------------S---S---------S---------------SS-----S---S
-S---------S------S--S--S------S-----S--S-S--S---S--SS--S----SSSSS-SSSSSSSSSSS--
---S-S-------S--S-----S------------S-----S----S-------SS-----S---S-----S--S--SSS
SSSSSSSSSSSSSSSSSSSS
>forward_1043
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---------------------------------------------------------------AGGAGCTCAGGGATCTC
GTT-----------------------------------------------------------------------------
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>reverse_2783
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--------------------------------------------------------------TAGTCTCACGGATGGTGG
GT------------------------------------------------------------------------------
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