>input_sequence_59382
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------------------------------------------------ATGGCCGGATCTTGGAAC--TGGGCGGATCTA
CCGGACGGGCCGACGGCGCTCATCGCCGACCGCGTCCTCGCCT---TCGACGTCGCCGACTACGTTCGCTTCCGCGCCGT
GTGCCTCCCG--------TGGCGGCGGTGCTCAGCGGGCCCCCGCGAGCACGGCAGCCTCGACCGCCGGTTCCATCCCCG
GCGGTGGACCATGCTCCGGGAGGAGCTCGCGGCGCCCAACCGCCGCTCCTTCCTGAAC---ACCTCCACCGGCGAGTGTG
TCCAGGTGGACCTCCCGGAGCTCCATGACCACACTGTGCTCGCCCTCACCCCCGAGGGCCTCCTCATTCTGCTCCAC---
AAGCTGCAGC------GCACCACCGTCCGCCTGCTCAACCCATTCACCGG---CCACCTCAC---GGAACTCCCGCCGCT
CACCACGCTGCTATCTCCACCGCACCACCACATGCTTAT---------------GTCTGGCATTGACCGTTTGGAAAGGG
TGTTCGCAGCGTGGGGCTCCGGCGTTGCCAATGATGATTCCACAGTTGTGCTCTGCTTCTACAAGCTGGGCGTGCTTGGC
ATGGCCAAGCCGAGCGATGACCACTGGACGTTGGTGA------AATGCAGATTTAATTCAATGGG---A-----------
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-------------------------GCACCCTTAATGCTGGCAGGCCGCTTCTACTGCGTTTGCTTGCACAATGGTCTCA
TGGTGCTGGAAACCAGCGCGGATCAGCCACCACGGCTGGAGATGGCCTCCCAGCTGA---ATTTCAGTGCCTCTACGATT
GGTTATAGTGTGCACCTGGTGAACAATTGTGGGGAGCTCATGCTGGTGCACCGTTGGT---GTGG------ACCATTGTC
ACCGGTCAACAGAGT---------GGGTTATTGGTACGATGCATATCGAGTGGATTTGGACAAG-------CGGAAGATA
TTCCCGGTCAACAGCTTGGGCG--GCGCCGCAGGGCGTGTGGTGTTCATGGGCATGC---ATTGCTCTCTATTGGTGTCT
CTAGAGAATTTCCCCTCCGGTTCCATAACTGCTGACACCATCTACTTAGGCTTTGACATTGCTGAAAGAGCGGAGTTTAA
AGTTGGAGCATATCATCTCGCAGATGAAAGCATCGAAGGCACCAGCAGATATCAGGGTCGCTTGGTGCCACGGCCGCATA
CTCTTGTTGACTGTCTATCTTTAGCCAATACTGTCTGA------------------------------------------
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--------------------------------------------------------------------------
>chr3B_1_TraesCS3B01G490100
CTGATAATTAGCAACCTCGCTTCCTTTTAAAAAGCGCTATTGATAAGCTTCTGTGTATAAGGTTTTCTCTAGTAGTGTCG
GTCCAGGCCTCCAGCATCGCGCTCCAACAACGGTGCTTTGCTGCGAGCGCTTCCACCGCGAAGGCCGTGTGAATCAGCCT
AGACAGTGGCAGTGGATCCCTGATGTGTTATCTTCACGAGCTGTGGAAGGAGCTCGTCGTCGTGAATGAGCTCTGTGAGC
TGCAGCAGGAGCTTGTCGTCGCGGACGGCAATGACCCTTCGGGACACGGCGTCGACAAAGCTGACGGCTCGCCCTGGCTG
CATCTCCTTCCACCGATGTATCCTGCGGGCTGCAACTCGTCAACTCGCTACCACCTTCTAAGGATCCTCTAGCCTATTGC
CATTGATGGATCTGAGAGGAAAGGGGACAGGAGGAGAGAGATGGGAGCGAGGAAGAAGATGGCAAGATGCGTTGACCAGC
GCTACAGCGAGAGAAGCGATTTCATGCTCAGGATTGTGCTTTTTTTGGTGTAGTATATGATAGACTGGGATAGAAAAGGT
CAGGGTACCGATTTCAGAGAATTGATGGCGAAGGTTCGTTTTTGTATGTATCTGCGACCTTTATATTTAGACTTCACTCG
TGATATAAGTGATATTGTTGTGCACCCGGTTTAATGGAATAGATGTTTTCATTTGAAGAAAAACGAACTTATTGGACAGA
GACACTGATGCTCGTACCATGTTCAACATATTCAGTTTGTTGGGATGGAACAATCATTTTTTTTTTTGAGGTAATAGCAC
GCTCCTGGAAAAAAAAATGCACTGCTCCACGAAACCAGAACAGCTCGTCCCCCATATCCACTCGTCCGACGGCG-----C
CGGCGGCGCGACCGGAGGCCGGAGCTCCTCCCGCCCAGACCCCCGTCCCT-TCCTCCTCTCCGTCTCTTGCAGTCTGAGC
TCAACTACCCCAAGGCGCCCTTCCTC--CTCCGCCGCATCCCGATCTGATGGCCGGATCTTGGAAC--TGGGCGGATCTA
CCGGACGGGCCGACGGCGCTCATCGCCGACCGCGTCCTCGCCT---TCGACGTCGCCGACTACGTTCGCTTCCGCGCCGT
GTGCCTCCCG--------TGGCGGCGGTGCTCAGCGGGCCCCCGCGAGCACGGCAGCCTCGACCGCCGGTTCCATCCCCG
GCGGTGGACCATGCTCCGGGAGGAGCTCGCGGCGCCCAACCGCCGCTCCTTCCTGAAC---ACCTCCACCGGCGAGTGTG
TCCAGGTGGACCTCCCGGAGCTCCATGACCACACTGTGCTCGCCCTCACCCCCGAGGGCCTCCTCATTCTGCTCCAC---
AAGCTGCAGC------GCACCACCGTCCGCCTGCTCAACCCATTCACCGG---CCACCTCAC---GGAACTCCCGCCGCT
CACCACGCTGCTATCTCCACCGCACCACCACATGCTTAT---------------GTCTGGCATTGACCGTTTGGAAAGGG
TGTTCGCAGCGTGGGGCTCCGGCGTTGCCAATGATGATTCCACAGTTGTGCTCTGCTTCTACAAGCTGGGCGTGCTTGGC
ATGGCCAAGCCGAGCGATGACCACTGGACGTTGGTGA------AATGCAGATTTAATTCAATGGG---A-----------
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-------------------------GCACCCTTAATGCTGGCAGGCCGCTTCTACTGCGTTTGCTTGCACAATGGTCTCA
TGGTGCTGGAAACCAGCGCGGATCAGCCACCACGGCTGGAGATGGCCTCCCAGCTGA---ATTTCAGTGCCTCTACGATT
GGTTATAGTGTGCACCTGGTGAACAATTGTGGGGAGCTCATGCTGGTGCACCGTTGGT---GTGG------ACCATTGTC
ACCGGTCAACAGAGT---------GGGTTATTGGTACGATGCATATCGAGTGGATTTGGACAAG-------CGGAAGATA
TTCCCGGTCAACAGCTTGGGCG--GCGCCGCAGGGCGTGTGGTGTTCATGGGCATGC---ATTGCTCTCTATTGGTGTCT
CTAGAGAATTTCCCCTCCGGTTCCATAACTGCTGACACCATCTACTTAGGCTTTGACATTGCTGAAAGAGCGGAGTTTAA
AGTTGGAGCATATCATCTCGCAGATGAAAGCATCGAAGGCACCAGCAGATATCAGGGTCGCTTGGTGCCACGGCCGCATA
CTCTTGTTGACTGTCTATCTTTAGCCAATACTGTCTGACGAGC---TATCCCATTTCCTT-GATGCTTAGC-ATGCATGT
ATGTGCGATATGTACTCTTGTATCCCATTTGG--TTAGCTACTATTTGAGTCTATGTATCTAGCTAGAGTTATCAGTTAT
GTAGAGATGACTGGTCGTGTTATGCACTCTTTTTTGCTGAGTTTCGTTTGAAGATGTGCACATGCAGGTTTGTATGCGTA
CTATTTGGAAACGAAGTGTGTTGCACTGTCTTGCATGAGTGCAATTATTTGCCTAATCAATTTGTGACCATGCCTAAAAG
AAGAGCAACTGG--------------------------------------------------------------------
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-----------------------------------------------TTTCCTTTGTCGGAAAGCAAGCCTGTCTGCTTT
CATGGCTGGAAGGTTGTTTTGGGCTGGGGTGACATTGTGAGATCTTTGGGAAAAGATGGTTAGTTGAATAACAAACCTCC
TTCTGCCCTTTACCATGATTTATATGACAAATGTAAGCATATGCATTTTCTTGC---AAGTTACTCCTTCCTGCCTTCTA
ACATGCCGTTGAGAA-AAGATGTGTAACCTTGTACCCATCACACATGCACCATGAAGTTATTTTGTTAATAGAGATTTGA
TATTAGTACAGTTTGTAAACTTGTTGTCTCAGTGATCTCTACGGTCAGGTTAGTG------GTCACTTGACGTTGTTAGG
TCAAACTTGACTATTGCTTTTTTAGTAAGGTTAGCAAAATATCTATCAATCTATGTAAATTCAGAACTTCCTTTGGACAT
GAGCTCAAGGT--TTTAGTTGTTCAGATTGAGCCAGGTTTGTTTGTCAACTTTGCTTATCATGTTAGGAACTTTTTTGAG
TCACTTTGCACGAATTTGCAGTTCCCCAGTTGAAGGATTTTGCCCATGCTTGAAATACGCTTCACAATTTTCAGCATGTA
AGTTAAGA---TGCAAGCAAATATGTCTTTTCAATCAATCTCGTTTGGAACTTCACTTCCTAGTCCCTGTTTAAGTTTAT
TCATGTTTAATTTGCAG-------------------GTTCCCCTGTGGACCTTGCAAAACATTATATGAGTTAC
>chr3A_818
TGCACC--------------------------------------------------------------------------
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----------------------TGCTCCACGAAAGCCGAACAACTCGTCCCCCCTATCCCCTCGTCCGACGGCGCCGTGC
CGGCGGCGCGATCGGAGGCCGGAGCTCCTCCCGTCCAGATCTCCGTCCCCCTCCTCCTCTCCGTCTCTTGGAGTGTGAAC
CCAACTACCCGAAGGCGCCCT---TC--CTCCGCCGCATTCCGATCTGATGGCCGGATCTCGCAAC--TGGGCGGATCTA
CCGGACGGGCCGACGGCGCTCATCGCCGACCGCGTCCTCGCCT---ACGACGTCGCCGACTACGTCCGTTTCCGCGCCGT
GTGCCTCCCG--------TGGCGTCGATGCTCAGCGGACCCGCGCGCGCACGGCAGCCTCGACCGCCGGTTCCATCCCCG
GCGGTGGGCGATGCTCCGGGAGGAGCTCGCGGCGCCCAACCGCCGCTCCTTCCTGAAC---ACCTCCACCGGCGAGTGCG
TCCAGGTGGACCTCCCGGAGCTCCATGACCACTGCGTGCTCGCCCTCACCTCCGAGGGCCTCCTCGTTCTGGTCCACCAC
AAGCCGCAGC------GCAACACCGTCCGCCTGCTCAACCCGTTCACCGG---CCACCTCAC---GGAACTCCCGCCGCT
CACCACGCTGCTATCTCCACACGACCAGCACATGCGTAT---------------GGATCTGATTGGCCGTTTCAAAAGGG
TGTTAGCAGCGTGGGGCTCCGGCGTTGCCAATGATGATTCGACAGTGGTGCTCTGCTTCAACACGCTCGACGTGCTTGGC
ATGGCCAAGCCCGGCGATGACCACTGGACGTTGTTAA------AATGCCAATTTGGTTCGATGTTAT-------------
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--------------------------CGCCCTTAATGCTGGCAGGCCGATTCTACTGCGTTAACTGGCACAATGGTGTCA
TGGTGCTGGAAACCAGCGGAGATCAGCCACCACGGCTGGAGATGGCCTCCGAGCTGA---ATTTGAGTGGCTCACTGATT
GAGGGTAGTCTGCACCTGGTGAACAATTGTGGGGAGCTCATGCTGGTGCACCGTTGGA---GCGG------ACCATTGTC
ATCGGTGAACAGATT---------GGGTTATTGGTACGATGCATATCGAGTGGATTTGGACAAG-------CGGACGCTA
TTCCCGGTCAACAGCTTGGGCG--GCGCCACCGGGCGTGCGGTGTTCATGGGCATGC---ATTGCTCCCTATCGGTGTCC
ATACAGAATTTCCCTTCTGGCTCCATTACTGCTGACACCATCTACTTAGGCTTTGACGTTGCTGAAAGAGCGGGGTTTAA
AGTTGGAGCATATCATCTCGCAGATGGAAGCATCGAAGGCACCGGCAGATATGAGGGTCGCTTGGTGCCACGGCCGCATA
CTCTTGTTGACTGTCTATGTTTAGCCAATACCGTCTGAGGAGC---TATCCCATTTCCTT-GATGTTTAGC-GTGCATGG
ATGCGCAATATGTATCT---------------------------------------------------------------
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>chr3B_858
CCACTGGCCG----------------------------------------------------------------------
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-------------------------------------------------------------------GACGGTG-----C
CGGCGGCGCGACCCAAGGTTGGAGCTCCTCCCGCCCAGATCCCCGTCCCC-TCCTCCTCTCCGTCTCTCGGAGTGCGAAT
CCAACTACCCCTAGGCGCCCTTCCTC--CTCCGCCGCATCCCGATCTGATGGCCGGATCTCGGAAC--TGGGCGGATCTA
CCGGACGGGCCGACGGCGCTCATAGCCGACCGCGTCCTCGCGT---ACGACGTCGCCGACTACGTTCGCTTCCGCGCCGT
GTGCGTTCCG--------TGGCGGCGGTGCTCGGCGGATCCGCGCGCGCACGGCAGCCTCGACCGCCGGTTCCATCCCCG
GCGGTGGACCATGCTCCCGGAGGAGCTCGCGGCGCCCAACCGCCGCTCGTTCCTGAAC---ACATCCACCGGCGAGTGCG
TCCAGGTGGACCTCCCGGAGCTCCATGACCACACTATGCTCGCCCTCACCCCCGAGGGCCTCCTCGTTCTGCTCCAC---
AAGCTGCAGC------GCACCACCGTCCGCCTGCTCAATCCATTCACCGG---CCACCTCAC---AGAACTCCCGCCGCT
CACCACGCTGGTACCTCCAGCGCACCACGGCAGGCTTG----------------GGCTGGTGTTTACCCTTCCCGAAGGA
TGTTCGCAGCGTGGGGCTCCGGCGTTGCCAATGATGATTCCACAGTGGTGCTCTGCTTCTACAAGCTCGGCGTGCTTGGC
ATGGCAAAGCCGAGCGATGACCACTGGACGTTGGTGA------AATGCAGATTTAATTCAATGGG---A-----------
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-------------------------GCACCCTTAATGCTGGCAGGCCGCTTCTATTGCTTTTGCTGGCGCAACGGTGCCA
TTGTGCTGGAAACCATCGTGGATCAGCCACCACGGCTGGAGGTGGCCTCCGAGCTGA---ATTTGAGTGGCTCGCCGATT
AGGGATAGTGTGCACCTGGTGAACAACTGTGGGGAGCTCATGCTGGTGCACCGTCGGT---GTGG------ACCATTGCC
ACCGGCGAATAGATT---------GGGTTATTGGTATGATGCATATCGAGTGGATTTGGACAA-------ACGGACGCTA
TTCCCGCTCAACAGCTTGGGTG--GCGCCGCTGGGCGTGCGGTGTTCATGGGTATGC---ATTGCTCCCTATCGGTGTCT
CTAGAGAATTTCCCTTCCGGTTCCATAACTGCTGACACCATCTACTTAGGCTTTGACGTCCCTGAGAGAGCAGGGTTTAA
AGTGGCAGCATATCATCACGCAGATGGAAGCATCGAAGGCGCCAGCAGATATCAGGGTCGCTTGGTGCCACGGCCGCATA
CTCTTGTTGACTGTCTATCTTTAGCCAATACTGTCTGACGAGC---TATCCCATTTCCTT-GATGCTTAGCCATGCATGG
ATGCGCGATATGTACTCCTGTATCCCATTTGG--TTAGCTAGTATTTGAGTCTCTGTATCTAGCTAGAGTTAT-------
GTATGGATGACTGCTTCTCTTCTGCACGCTTTGTTGCTGAGTTTCGTTTGAAGGTGCGCACATACAGATTTGTATGCATG
TTATCGAGAGAAGAAGTGTGTTGCACTCTTTTACACTAGTCCAAGTATTTGCCTAATTAGTTTGTGGCTTTGGCAAAAGG
CAAAGCAACTTTCTTGCCTTGGACTCTTTTCTTTTGTTGGGGCTTGTTATGCTGTGCCCCAAGCTGAACCCTCACTTTTG
CACTTGCTACTACCTCTCTTTCTTGCCTTGGACGTGAACTTCTGATGCTGTTGGATGCTTGGTGCTTGTGCTTTATAATA
TAAAGCGGGGGGAAACCCTTTTTCGTGAAAGGCAAAGCAACTTATTATTTCCTCTGTTGGAAA-----------------
--------------TGTTTTGCTCTGGGGTGACTTTGTGAGATCTTCGG---AAGATGGTTAGTTAAAAAACAAACCTCT
GTATGCCCTTTACCATGGTTTATATGACATTTGTAAGCAAATGAGTTTTCTGGTAATAAGTTACTCCTTCCTGCCTTCTT
TTAATTGGACCTTGAGAAGATTCGTAACCTGGTCCTCATCACACACGCACCATGAAGTTATTTTGTTAGTATAGATTTGA
TATTAGTCCACTTTGCAAATTTGTCGTCTCAGCGATTTCTATGATCAGGTTAGTGTTCATTGTCACTTGACTTTGTTAGG
TTAAACTTCAATATGTTTATTTTAGTAAGCTTAGCAAAATATCTAT--------GTAAATTCAGAGCTTTCTTTGGACAT
CAGATCAAGTGGGTTTAGTTGTTTAGATTGAGTACG--------------TTTGTTTGTCATGTTAGGAGCTTTTTTTAA
TTACTTTGCACGAATTTGCAGTTCCCCAGTTCAAGGATTTTGCCCATGCCTGAAATACGCTTCACAATATTCAGTGTTTA
AGTTAAGAAGATGCAAGAGAATGTGTATTTTCATTT-ATCTCGTTTGGAACTTCACTTCCCTA-----------------
-----TTCAATTTGCAGGTTTCTATTTGTGTTGTTAGTTCCTATGTGGACCTTCCTAAGCAATATATGAGTTAC
>chr3A_964
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---------CCAAGGTGTCGTTGCTCCTCTTCACCGCACTCCGATCTGATGGATGCATCCCGTGAC--TGGGCGGATCTA
TCGGGCGGGCCGACAGGGCTCATCGCCGACCGCGTCCTTGCCT---ACGACGTCGCCGACTATGTCCGTTTCCGCGCCGT
GTGCCGCCCG--------TGGAGGCGGTGCTCAGCGCACCCGCGCGCGCACAGCGTCCTCGACCGCCGGTTCCATCCCCG
GCGGTGGACCATGCTCCGGGACGAACGCGCCGCGCCCAGCCGCCGCTCCTTCCTCAAC---ACATCCACCGGCGCGTGCA
TCCAGGTCGACGTCCCGGAGCTCCATGACCACGTCGTGGTCGCCTACACCCCTGAGGGCCTCCTCGTTCTGCTCCAC---
GATCCGCAGC------GCACCAGCATCCGCCTCCTGAACCCGCTCACACGCCACCTCCTCAC---AGACCTCCCGCCAAT
CACCACCTTGCTGCCTCGACATGCT---------CAGCGCGACCTTCCGCGCTCGGTTCATTGTGACTATCTAGAAAGGA
AATTCACAGCGTGCAGATCCGGCATTGCCAGTGATGATTCGACGGTGGTGCTTTGCTTTAACCAGCTGGTCATGCTTGGC
ATGGCTAAGCCCGGTGACGACCATTGGACGGTGCTGGATCTAAACTACCAAGGCAGTTTGCTGGGAACAACACCCTTAGG
GCATCTCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCACCCCC
ACGACCTCAAAAAAGCGCCGGCGAACCCAGGCCAAACCCAGCGCATCGGGGGGCTGTTGGGGGCGCCGGCGGAAGCAACG
ATCAATCCTATTCCCCCACGCGTCCTTTTTCTTGACGATTGTCCTGGGGGAAGCCACGGCGATTGTCTCGGGGGCACCCA
CGACTGGAAAAATGTACTCGCCCTCCCCCCGGCGGAAGCATTTTGCCCCCCAGGACGTGCTTTTTTTGGTCCGGCGATTG
TCCTGGGGGGCTCCAACGGCTGGAGATGCCCTTAATGCTGGCAGGCCACTTTTACTGTGTTACA---GTACAAGGCATCA
TGGTGCTCGAAACGGGAGCAGATCAGCCACCACGGCTGCATGTGGCTGCCAAGCTGA---ATATAGATGTCCGGCACAAT
GTGCATTGCATGCACCTGGTGAACAATTGTGGGGAGCTAGTGCTAGTGCACCGTCGAGCACGTGAGTTTG------TGTT
GCCCAGGAAAAACAA---------GAGTTGGATGTGTGACACGTATCGAGTGGATTTGAACGC-------CAGGATGCTA
TTCCTTGTCAAGAGCTTGGGCG--GCGGTGCAGGGCGTGCAGTGTTCATGGGCATGAATAATAGCTCTCTGTCAGTGTCT
CTGGGGATTTTCCCCTCCGGATCCATTTGTGCTGACACCATCTACTTAAGCTTTGATTTTGAAGAGAGTGAGTATTCAAA
CATTGGAGCCTATCATCCTAGACTTGGGCGCATGGAACGCGCCACCAGACGCTTGGGTGGCTTGGTGCCACGGCCGTATA
CTCTTGTCGACTGTCTATCTTTGTCCAATAGTTTCTGAGAACTAT-----------------------------------
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>chr3D_986
CCG-----------------------------------------------------------------------------
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-------------------------------------ATCCCGATCTGATGGCCGGATCTGGGAAC--CGGGCTCATCTG
CCGGACGGGCCGACGGGACTCATCGCCGACCGCATCCTCGCCAATAACGACGTCGTCGACTTCCTCCATTTCCGTGCCGC
CTTCCCCCAG--------TGGCAGCGATGCTCCGTGGATCCGCGAGCGCACGGCAGCCTCGACCGCCGGTTCCATCCGCG
GCGGTGGACGATGCTTCGGGAGGAAC-------------ACGCCGCACCTTCCTCAAC---ACCTCCACCGGCGAGTGCG
TCCAGGTGAACATCCCCCAGCTCCGTGACCACCACGTGCTCGCCCTCACCCCCGTGGGCCTCCTCCTTCTGCTCGAC---
AAGCCGCAGC------GTACCGCCATCCGCCTGCTCAATCCCTTCACCGG---CCAACTCAC---GGAGCTCCCGCCGCT
CGACACGCTGCTGCCTCATATAGCGCACTACAACCAGCGCGACGAC------------------GACGATTTCGCAAGGA
TTATGACAGCATGGGGCTCCGGTCTTGCCGACGATGATAGGACGGTGGTGCTCTGCCTCAGCACGCACCACAGGATTGGC
ATTGCCAAGCCCGGCGATGACTGCTGGACGCTGCTCAGGCTCAG------AGACAACTTGCTGGGGGAAGCACCCTTCA-
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--------------------------------TAATGTTTGCAGGCCGCTTCTACTGCGTCACT---CGAGATGGTGTCA
TGGTGCTGAAAATGGACGAAGGTCAACCACCACGGCTGGAACTGGCTGCCAACCTAA---ATATGGATGCCTTGCTGTCT
GTGGATTACATACACCTCGTGGACAATTGTGGGGAGCTACTGCTGGTGCACCGTCAAA---GGTACGACACACATTCGAT
TCCCAGGAATAATTTTAATATGTGG---AGGAGGTACGGCACGTATCGTGTGGATTTGGAGAAGGAGGTACGGGACGCTA
TTCCCAGTCAAGAGCTTGGGCA--GCGGCAAAGGGCGTGCCGTGTTCATGGGCATGT---ACTCCTCTCTTTCGTTGTCC
CTAGAGAATTTCCCCGCCGGCTCTATTAGCGCCGACACCATATACTTGAGCTTTGACTTTGGCGAGACTGAGTATTCAAA
CGTTGGAGCATATCATCTCACCTCTGGATGCCTTGGACGTGACAGCCGACGTTGGGGAGGCCTGGTGCCACGGCCGCATA
CACTCGTTGACTGTCTAAGTTTCGCCAATACT------------------------------------------------
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>chr3D_996
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-------------------------------------------ATCTGATGGCCGGATCTCGGGAC--TGGGCGGGCCTC
GCGGCAGGGCCGGCGGGGATCATCGCCGACCGCGTCCTGTCCT---ACGACGTCGCTGATTACGTCCGTTTCCGCGCCGT
GTGCTGCCCC--------TGGCGGCAGAGCTCGGCTGATCCACACGCGCACGGAGTGATGGACCGCCGGTTCCACCCCTG
GCGGTGGACGATGCTCCGGGAGGAACACGCCGCGCCCAGTCGCCGCTCCTTCCTCAAC---ACCTCCACCGGCGAGTGCA
TCCAGGTGGACATCCCCGAGCTCCTGGACCACGACGTGCTCGCGGTCACCGCCGAGGGCCTCCTCGTTCTGCTCCAC---
AGGCCTCAGT------GCACCGATGTCCGCCTGCTCAACCCGCTCACCCG---CCAACTCCTTGCAGATCTCCCGCCGAT
CACCACGCTGCTACCTCCCCTACCCGGAATAGGCATTTTCAATTATTTTTTCGACA---------------TCTTCAGAC
AGTGCACGGCCTGGGGCTCCGGCATCGCCGGTGATGATTCAACAGTGGTGCTCAGCTTCAATCGGCTCGGCATGCTTGGC
ACGGCCAAGCCCGGCGACGACCACTGGACGCCAGTCT------ACTACGACGGTTATTCTCTGGGTACA-----------
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-------------------------GCACCCGTGATGCTGGCAGGCCGCTTCTATTGTGTTACG---GTAAAGGGTGTCA
TGGTGTTGGAAATGGGTGGAGATGAGCCACCTCGGTTGGTGGTCGCTGCCAACCTGA---ATATGCCTGCCCGGCCATTT
GAGGATTGCATGCACCTGGTGAACAATTGTGGGGAGCTATTGCTGATCCACCGTCAAA---GCGT------GACGCAGCC
ATCCGGGAGTAGTATT------TGGAGGGAGAGGTACGACACATACCGAGTGGATTTGGACAATGAGGG-------GCTA
TTCCGAGTCAAGAGCTTGGGCG--GCGGCACAGGGCGTGCGGTGTTCATGGGCGCGG---ATGGCTCTTTGTCGGTGTCT
CTAGATGTTTTCCCCTCCGGCTCAATTAGTGCTGACACAATCTACTTGAGCTTTGACTTTGGCGAGAGGGAGTTTTTAAA
CATTGGATCATATCATCTCAGGTTTGGATGCGTGGGACGTGCTAGCAGACGCTGGGGTGGCTTGGTGCCATGCCCCCATA
CCCTTGTTGACTGCCTGTGTTTAGCCAATACTGTC---------------------------------------------
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>chr3A_1005
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----------------------------------------------------CCGGATCTGAATCTGATGGCCGGATCTC
GGGACTGGGCGGGCGGGGATCATCGCCGACCGCGTCCTGTCCT---ACGACGTCGCTGATTTCGTCCGTTTCCGTGCCGT
GTGCTGCCCC--------TGGCGGCAGTGCTCCCTCGATCCAGGAACGCACGGCGTGATGGACCGCCGGTTCCACCCCTG
GCGGTGGACGATGCTTCGGGAGGAACACGCCACCCCCAGCCGCCGCTCCTTCCTCAAC---ACCTCCACCGGCGAGTGCA
TCCAGGTCGACATCCCCGAGCTCCTGGACCACGACGTGCTGGCGGTCACGGCCGAGGGCCTCCTCGTTCTGCTCCAA---
AGGCCTGAGT------GCACTCACGTCCGCCTGCTCAATCCGCTCACCGG---CCATCTCATTGCAGATCTCCCGCCGAT
CACCACGCTGCTGCCTCCC------GGAGTAGGTCTTTTCCATTATTTTTTCGACA---------------TCTATAGAC
AGTGCACGGCCTAGGGCACCGGCATCGCTGGTGATGATTCAACAGTGGTGCTCAGCTTCAATCGGCTCGGCATGCTTGGC
ACGGCCAAGCCCGGCGACGGCCACTGGACGCCGGCCT------ACTACGACGGTTATTCTCTGGGTACA-----------
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-------------------------GCACCCGTGATGTTGGCAGGCCGCTTCTATTGTGTTACC---GTAAAAGGCGTCA
TGGTGTTGGAAATGGGTGCAGACGAGCCACCTCGGTTGATGGTGGATGCCAACCTGA---ATATGACTGCCCGGCCATTT
CAGGATTGCATGCACCTGGTGAACAATTGTGGGGAGCTATTGCTGATCCACCGTCAAAAGCCTGACGCCGCCG-------
-TCCGGGAGTAGTATT------TGGAGGGAGAGGTACGACACATATCGAGTGGATTTGGACACTGAGGG-------GCTA
TTCCGAGTCAAGAGCTTGGGCG--GCGGCACAGGGCGTGCGCTGTTCATGGGTACGG---ACGGCTCTTTGTCGGTGTCT
GTGGATGTTTTCCCCTCCGGCACGATTAGTGCTGACACAATCTACTTGAGCTTTGACTTTGGCGAGAGGGAGTTTTTAAA
CATTGGATCATATCATCTCAGGTTGGGATGCGTGGGACGTGCTAGGAGACGCTGGGGTGGCTTGGTGCCAT-GCCCCATA
CTCTTGTTGACTGCCTGTGTTTAGCCAATACTGTC---------------------------------------------
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>chr3B_1014
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-------------------------------------------------------------GGGAC--TGGTCTGATCTA
GACGACGGGCCGGCCGGGCTGATCGCCGAGCGCGTCCTCGCGT---ATGACGTCGCCGACTATCTCCGCTTCCGTGCCGT
GTGCCGCGCA--------TGGCGGCAGTGCTGCACGGAACCGCGCTCCCACGGCGGGCTCGACCGCCGGTTCCATCCCTC
GCGGTGGGTCCTACTCCGCGAGCCCCTCGCTGTCCCCAACCGCCGTTGCTTCCTAAAC---TCCTCCACCGGCGAATGCA
TCCAAGTGGACCTACCGGAGCTCCTTGACCATGAGCTGCTCGCCGTCACTCCCGAGGGCCTCCTCGTCCTGCTCCAC---
GAC------C------ATAACCACGTCCGCCTGCTCAACCCGCTCACGCG---TCACCTCAT---AAAGCTACCGCCGCT
CACCACGCTGCTGCCCTCTAAG------GACCATGTCTTGCTTTCCTATTTCAACA---------------TAG---ACG
ATTTCTTAGCGACGGGCTCGGGCATTGCCAGTGACGATTCAACAGTGGTGCTCTGCTTCAATAGGTTCTGCATGCTTGGC
ACGGCCAAGCCCGGCGATGACCACTGGATGTTGCTGA------AGTACAACCATGATGGGTTTACA--------------
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----------------------GACACGCCGTTAATGTTTGCAGGGCGCTTCTACCATGTTAAC---GTTGATGGTGTCA
TGGCGCTGCAAATCTCTCCAAACCAGCCACCACGGGCGGAGGTGGCTGCCAAGCTGA---ATATGCGTGTCTGCCCATAT
TCGGAAGGGTTGCACCTCGTCAACAGTTGTGGTGACCTGATGCTGATCCACCGTCAGA---TTCT------ACCATTGAC
GTCGCGGAATGGATC---------GTGTTACTGGTACAACATGTATCGTGTGAATTTGGATAC-------CGGAACACTA
TTCCCAGTCAAGAGCTTGGGTG--GTGGCGCAGGGCGAGCGATGTTCTGGGGCATGC---ATTGCTCTTTCTCAGTGCCT
CTAGAGGTTTTCCCCTCTGGCTCCATTAGCCCCGACACCATCTACCCGAGCTTTGACTTTACTGAGAGAAGTCTGTTAGA
AGTTGGAGCATATCATCTTGTGGATGGACGCATCGAACGACCATC------------TAGCTTGGTGCAGCGACCGCATA
CTCTTGTTGACTGTCTATCTTTGTCAAATACGGTCGAGCTTTAGTTTATCCCATTTCCTTTGATAATTTAGCATGCATGG
TTATGCAATGTGGACTTTTTG-TCCCATTTGG--TTAGCTCTCATTTGAGT-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr3B_1017
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------AC--TGGGCGGCTCTT
GGCGATGGGCCGGCGGGGCTGATCGCGGAGCGCGTCCTCGCCT---ACGACGTCGCCGACTTTCTCCGCTTCCGCGCCGT
GTGCCAACCG--------TGGCGGCGGTGCTCCGTGAACCCGAGCGCCCACGACGGCATGGACCACCGCTTCCATCCCCG
GCGGTGGACCATGCTCCGGGAGGAACTCGCCGCGCCGGAACGCCGCTGCTTCCTCAAC---ACATCCACCGGCAAGTGCG
TCCAGGTCGACATCCCGGAGCTCCATGACCATAAGTTGCTGGCCGTCACCCCCGAGGGCCTCCTTCTCTTGGTCTAC---
------CAAC------GCAACCACGTCCGCCTCCTCAACCCGCTCACCCG---AAAACTCAC---AGAGCTGCCGCCGCT
CACCACAGTGCTGCCCTCCAAGTTCAAGGACATGGGCATACTTGACGAGAGTAA---------TGAACTTTTTGACCAAG
AATTCATCGCGTGGGGCTCTGGTGTTGCCAGTGATGGTTCCACATTTGTGCTCTGCTTCAACATGCTCGACCTGCTTGCC
ACGGCCAAGCCCGGCGACGACCACTGGACGTCTGTAA------ACAACAACGGTGATGGGGCAC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TGGCAGCCTTAATGTTTGAGGGCCGCTTCTACTGCGTTGAC---AACAATGGTG-CA
TGGTACTGAAAACTGGAGCAGATCAGCCACCACGCCTGGAGGTGGC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr3D_1017
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------AC--TGGGCGGCTCTT
GGCGATGGCCCGGCGGGGCTGATCGCGGAGCGCGTCCTCGCCT---ACGACGTGGCCGACTTTCTCCGCTTCCGCGCCGT
GTGCCAACCGCCCAACTGTGGCGGCGGTGCTCCGTGAACCCGAGCGCCAACGACGGCCTGGACCACCGCTTCCATCCCCG
GCGGTGGACCATGCTCCGGGAGGCACTCGCCTCGCTGGAACGCCACTGCTTCCTCAAC---ACATCCACAGGCGAGTGCG
TCCAGGTTGACATCTCGGAGCTCCATGACCATAAGTTGCTGGCCGTCACCCCCGAGGGCCTCCTTCTCCTGGTCCAC---
------CAAC------GCAACCACGTCCGCCTCCTCAACCCGCTCACCCG---AAAACCCAC---AGAGCTGCCGCCGCT
CACCACACTGCTGCCCTCCAAGTTCAAGGACATGGGCATACTTGATGAGAGTAA---------TGAACTTCTCGACACCG
AATTCATTGCGTGGGGCTCTGGTGTTGCCAGTGATGGTTCCACATTTGTGCTCTGCTTCAACATGCTCGACCTGCTTGCC
ACGGCCAAGCCCGGCGATGACCACTGGACGTCGGTAA------AGAACAACGGTGATGGGGCAC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------TGGCAGCGTTAACGTTTGAGGGCCGCTTCTACTGCGTTGAC---AACAATGGCGTCA
TGGTACTGAAAACTAGAGTAGATCAGCCACCACGCCTGCAGGTGGC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr3A_1063
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------CGTCCTTGCCT---ATGATGTTGCCGACTACCTCCGCTTCCGTGCCGT
TTGCTGCCCA--------TGGCGACGTTGCTCTGTTGACCCACGCGCCCATGGTGGTCTGGACCGCCGGTTCCATCCCCG
GCGGTGGACCATGCTCCGGGACGAACTCGTGGCGCCGGAAAGCCGCTGCTTCCTCAAC---ACATCCACCGGCGAGTGTG
TAAAGGTCTGCATAGCAGAGCTCCATGACCATGAGCTGCTCGCAGTCACCCCCGAGGGCCTTCTTGTTCTTCTCCAC---
GAC------C------GCAACCATGTCCGCCTCCTCAACCCGCTCACCCG---CCACCTCAC---AAAGCTCCCTCCGCT
CACCACGCTGCTGCCCTCTGAG------GACCATGGTATGTTTGACGAAGATAG---------TGA------CGACATGG
ATTTTATTGCGTGGGGCTCTGGTATTGCCAGTGATGATTCTACATTCGTCCTCTGCTTCGACATGCTCCAACTGCTTGGC
ACGGCCAAGCCCGGCGACGACCACTGGACTTTGCTAA------AATACAACAGTGATGGCATCACA--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GTGGCACCCTTATTGTTTGAAGGCAGCTTCTACTGCGTTAGT---GACGATGGTGTCT
TGGTACTCAAAATCGGCGCAGATCAGCCACCACGGCTGGAGGTGGCTGCCAAGATGGAAGACATGCGTGTCTCGCGGATT
GCTGATAGTGTGCACCTCATCAACAATTGTGGGGAGCTGATGCTGGTGCACCGTCGAA---GGGG---------ATTGAC
AGCAGATAATAAATC---------AGGTTCTTGGTATGACACATATCGAGTGGATTTGGACAC-------CAGGACACTA
TTTCTGGCCAATAGCTTTGGCG--GTGACGCAGGGCGTGCAGTGTTCATTGGCATGC---ATTGCTCTCTTTCAATCTCT
CTAGAGGCTTTCCCCACTGGCTCCATAAGCGCCGACACCATCTACTTGAGCATTGATGTTGGCGAGAGAGAGCGGTTAGA
AGTTGGAGCATTTCATCTGGCAGATGGAAGCATAGAACGCCCCAGCACATACAGCGGTGGCTTGGTGGCACGGCCTCATA
CTCTTGCTGACTGTCTATCCTTAGCAAATGCTGTATTATAGCTAGAGTTAAT-------------ATTTAGCAGGCATGT
ATATGCAATGTGTACTCTTTTATCCCAATTTAGTTTAGGTAGTGTTTGAGTGCATGTATCTAG-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr3B_1097
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TTCCGCGCCGT
GTGCCGCCCG--------TGGAGGCGGTGCTCGGCGCACCCGCGTGCGCACGGCGTCCTCGACCGCCGGTTCCATCCCCG
GCGGTGGACCATGCTCCGGGACGAGCGCGCCACGCCCAGCCGCCGCTCCTTCCTCAATAGTACATGCACCGGCGAGTGCG
TCCAGGTCGACATCCCGGAGCTCCATGACCACGTCGTGACCGCCTGCACCCCTGAGGGCCTCCTCGTTCTGCTCCAC---
GAGCCACAGC------GCACCAGCATCCGCCTCCTGAACCCGCTCACACGCCACCTCCTCAC---AGACCTCCCGCCAAT
CACCACGTTGCTGCCTCGACATGCT---------CAGCGCGACCTTTCGCGCTCGGTTCATTGTGACTATCTAGAAAAGA
AATTCACAGCATGTGGCTCCGGCATTGCCGGTGATGATTCGACCGTGGTGCTTTGCTTTAACCAGCTGGGCATGCTTGGC
ATGGCCAAGCCCGGCGACGACCACTGGATGGTGCTGGATCTAAACTACCAAGGCAGTTGGCTGGGAACA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------ACACCCTTAGTGCTGGCAGGCCGCTTCTACTGTGTT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chrUn_1097
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TTCCGTGCCGC
CTGCCCCCAG--------TGGCAGCGATGCGCCGTGGATCCGCGAGCGCACGGCAGCCTCGACCGCCGGTTCCATCCGCG
GCGGTGGACGATGCTTCGGGAGGAACACGCCGCGCCCACCCGCCGCTCCTTCCTCAAC---ACCTCCACCGGCGAGTGCG
TCCAGGTGAACATCCCCCAGCTCCGCGACCACCACGTGCTCGCCCTCACCCCGGAAGGCCTCCTCCTTCTGCTCGAC---
AAG------CCACAGCGTACCGCTGTCCGCCTGCTGAATCCCTTCACCGG---CCATGTCAC---GGAGCTCCCGCCGCT
CGACACGCTGGTGCCTCATATAGCGCACTACAACCAGCGCGACGAC------------------GACGATTTCGCAAGGA
TTATGACAGCATGGGGCTCCGGTCTTGCCGACGATGATAGGACGGTGGTGCTCTGCCTCAGCACGCACCACAGGATTGGC
ATTGCCAAGCCCGGCGATGACCGCTGGATGCTGCTCAGGCTCAG------AGACAACTTGCTGGGGGAAGCACCCTTCA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TAATGTTTGCAGGCCGCTTCTACTGCGTCACT---CGAGATGGTGTCA
TGGTGCTGAAAATGGATGAAGGTAAGCCACCACGGCTGGAACTAGCTGTTAACCTGA---ATATGGGTGTCTCGCTGTCT
GATGATTACATGCACCTCGTGGACAACTGTGGTGAGCTATTGCTGGTGCACTGTCAAA---GGTACGACACACATTCGAT
TCCCAGGAATAATTTTAATATGTGGAGAAGGAGGTACGGCACGTATCGTGTGGATTTGGACAG-------CGGGACGCTA
CTCCCACTCAAGAGCTTGGGCAGCGCGGCAAAGGGCGTGCCGTGTTCATGGGCATGT---ACTCCTCTCTGTCCGTCTCC
CTAGAGAGTTTCCCCGCCGGCTCTATTATCGCCGACACCATCTACTTGAGCTTCGACTTTGGCGAGACTGAGTATTCAAA
CGTTGGAGCATATCATCTCACCTCTGGATGCCTTGGACGTGACAGCCGACGCTGGGGAGGCCTGGTGCCACAGCCGCATA
CACTCGTTGACTGTCTATGTTTCGCCAATACTCTC---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chrUn_1097
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------TTCCGTGCCGC
CTGCCCCCAG--------TGGCAGCGATGCGCCGTGGATCCGCGAGCGCACGGCAGCCTCGACCGCCGGTTCCATCCGCG
GCGGTGGACGATGCTTCGGGAGGAACACGCCGCGCCCACCCGCCGCTCCTTCCTCAAC---ACCTCCACCGGCGAGTGCG
TCCAGGTGAACATCCCCCAGCTCCGCGACCACCACGTGCTCGCCCTCACCCCGGAAGGCCTCCTCCTTCTGCTCGAC---
AAG------CCACAGCGTACCGCTGTCCGCCTGCTGAATCCCTTCACCGG---CCATGTCAC---GGAGCTCCCGCCGCT
CGACACGCTGGTGCCTCATATAGCGCACTACAACCAGCGCGACGAC------------------GACGATTTCGCAAGGA
TTATGACAGCATGGGGCTCCGGTCTTGCCGACGATGATAGGACGGTGGTGCTCTGCCTCAGCACGCACCACAGGATTGGC
ATTGCCAAGCCCGGCGATGACCGCTGGATGCTGCTCAGGCCCAG------AGACAACTTGCTGGGGGAAGCACCCTTCA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------TAATGTTTGCAGGCCGCTTCTACTGCGTCACT---CGAGATGGTGTCA
TGGTGCTAAAAATGGATGAAGGTAAGCCACCACGGCTGGAACTAGCTGTTAACCTGA---ATATGGGTGTCTCGCTGTCT
GATGATTACATGCACCTCGTGGACAACTGTGGTGAGCTATTGCTGGTGCACCGTCAAA---GGTACGACACACATTCGAT
TCCCAGGAATAATTTTAATATGTGGAGAAGGAGGTACGGCACGTATCGTGTGGATTTGGACAG-------CGGGACGCTA
CTCCCACTCAAGAGCTTGGGCAGCGCGGCAAAGGGCGTGCCGTGTTCATGGGCATGT---ACTCCTCTCTGTCCGTCTCC
CTAGAGAGTTTCCCCGCCGGCTCTATTATCGCCGACACCATCTACTTGAGCTTCGACTTTGGCGAGACTGAGTATTCAAA
CGTTGGAGCATATCATCTCACCTCTGGATGCCTTGGACGTGACAGCCGACGCTGGGGAGGCCTGGTGCCACAGCCGCATA
CACTCGTTGACTGTCTATGTTTCGCCAATACTCTC---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr3A_1608
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CACCCTTAATGCTGGCAGGCCGCTTCTACTGCGTTACC---GTCCAAGGCGTCA
TGGTGCTCGAAACAAGTGCAGATCAGCCACCACGGCTGCAGGTGGCTGCCAAGCTGA---ATATTGATGTCCGGCCAAAT
GTGGATCGCATGCACCTGGTGAACAATCGTGGGGAGCTAATGTTGGTGCACCGTCGAGCACGTGA------ACATTTGGT
ACCCATGAATAACAA---------GCGTTGGATATGCTACACGTATCGAGTAGATTTGGACGC-------CGGGACGCTA
CTCCTTGTCAAGAGCTTGGGCA--GTGGCGCAGGGCGTGCGGTGTTCATTGGCATGAATAATAGCTCTCTGTCAGTGTCT
TTGGGTATTTTCCCCTCTGGATTCATTTGTGCTGACACCATCTACTTAAGCTTTGATTTTGAAGAGAGTGAGTATTCGAA
CATTGGAGCCTATCATCTTAGACTTGGACGCATGGCACGCGCCAACAGACGCTTGGGTGGCTTGGTACCACGGCCGTATA
CTCTT--TGACTATTTATCTTTGTCCAATAGTTCCTGAGAACTAT-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>SNPs
-S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS------------S-S-----S----------S-----S--------------------
---------------------------------------S---------S--------------------S---S---S-
S-----------------------------------------------------------S-------------------
----------------------------------------------S---------------------------------
-------------------------------------S---S----S---------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
-------------------------------------------------------S----S-----------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S----------S---
--------------------------------------------------S-------------S--------SS-----
---S----------------------------------------------------------------------------
------S------S-------------------------------------------------------------S-S--
---------------------------------------S--------------------------------S-------
---------------------------------------------------------S----------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S-------------------------------SSSSSSS
---SS--------S-SS-S--S-----S----S--------------------S--S------S---S---------S-S
S---SSS--S-S---------------S-S--S--SS---S---S------------S-S------S-SS--S-S---S-
S-S-------SS--------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S---S-----SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS-------SS----------S------------S--SSS-------------S--S----------S
S-S--------------S-----------SS--------S---SS------S-S-------------------------S
SS-SSSS-SSSSSS-------SS-------S--S-S---------S----------------------S--S--------
-------S--S----S---S----S-------S---S----S-S---------------------------S--------
-S------S-S---SSS-S----------S----------------SSSSSSSS-----------S---S----------
S--S-----SS------------S--------SSS-SSSSSSSSSSSSSS----S--S-----------S-------S-S
-S-----------------------------S-----------------S------------------S-----SS-S--
-----------------SS---S---S------S-SS-----------------------SSSSSSSSSSSSSSSSSSSS
SSSSS--S---------------------------------SS----------S-S--S--S------------
>forward_500
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
GCTACAGCGAGAGAAGCGAT------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>reverse_3543
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GCTGGGGTGACATTGTGAGA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
