>input_sequence_59372
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------ATGTCGA------------CGCCGACGCCGGCGCTACTAA
CCGACGAGGGCATGGCGAGGGTGCGCCGCAAGAAGGACTTCCGCCACATGGAGCGGGTGGACGGCCGCATGCTCAACGTG
CTGCAGGGCCTCGAGCTCCACGCCAACGTCTTCTCCCCCGACGAGCAGGCCAAGATCGTCGCCTGCGTCCTCGACCTCCA
GGACCAGGGCCGCCGCGGCCGCCTCCGAGGTACCCAACCCAACCTTCCCCCTCTTCTTCATCTCCAACACCCCTCCGATG
AATTCTCCCGT------------------GCTCCTTCTTCCATGCCCGATCTTGATCTGACGACCTCGATTCTTCTTC--
------------CAGAGCGGACCTACTCGGAGCCGCGCAAGTGGATGCGGGGCAAGGGCCGGGCGACGATCCAGTTCGGC
TGCTGCTACAACTACGCCGCCGACCGGGACGGCAACCCGCCGGGCATCGTGCGGGACGAGGCCGTCGACCCGCTGCCGCC
GCTGCTCGCCGCCATGGCGCGCCGCCTCGTGCTCTGGCGCGTGCTCCCGCCCTCCTGCGTGCCCGACAGCTGCATCGTCA
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------C---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GTCTACGACGTCGACGAC
TGCATCCCGCCGCACGTCGACCACCACGACTTCCTCCGCCCCTTCTGCACCGCCTCCTTCCTCACCGAGGCCCCAATCCT
CTTCGGGAAGGACATGAGGGTGGTCGCCCCCGGTGAGTTCTCCGCCGCGGCCTCCATCCCGCTCCCCGTGGGGTCGGTCC
TCGTGCTCGCCGGCAACGGCGCCGACGTCGCCAAGCACTGCGTCCCCGCCGTGCCGGCCAAGAGGATCTCCATCACGTTC
AGGAAGATGGACGCCTCC----AAGGTCCCGTTCGGGTTCCGGCCCGACCCGCTGCTGCAGAGCCTCGCCGCTGCGGTGG
TCCGGCCGGCGATGACGGCGGCGAGCGCGCCCCCGAACAGAGCGGCCTGGGAGCAGAGCAATGGCGAGGCGGCGAAGCAT
GCGGCGCCT---CAG---CAGCAGCACCAACCGGCGGCGCCTCTGTACAAGGCTGCTGCTGCTGTCAGGGCGGGACAGAC
ACAG------AGCCCCG---GGGGCGGCGTCTCTTTCAGCCTCTCCACCGACGAGTTCCCGGCGCTTGGTGCCTCGCCGG
CCAGCGGACGACGGCCGGGAAGGAGATAA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
>chr2A_1_TraesCS2A01G568300
CCGTTGGATTCCG--CGTCGAGATCTTCAAAAACTAGATTCTGTGTTGATAGGTTTTGACGAAAAAA-TTCAAAAAAATC
GGACAAAAAAACGGACGAAAACCCCGAAGTGGGAGCAAGTTTTTTTCCTTTACGAAAGAGGCACGGTTGTGCCTCTCGTG
AAAGCATAACCATGCCTCTCGCGGAAGGAAACAAAAAACAAAAAACGTATTTTTTTCCCGTTTCCGAGAGACACGGCCGT
GCCTGCCTCTCGTGGAATAAAAAAAATAGGAAACACGTTGTTTTCGTTTTTGAGAGGCATGGTCGTGCCTCTCGCAGAAG
CATAACCATGCCTCTCTCGTGAAAGCAAAACCTTGCTTATCACGGAAGAAAGAAAATAGAAAACACATTTTTTTTCGTTT
TCGAGAGGCATGGGCGTGCCTCTCGCGAAAGCAAAACCGCGACTCTCGCGGAAGAAAAGAA-TGTGTTTTTTCGTGCAAG
AAAAGAAATTCGAAATTTT---TTCTTGTGCGGAAGCTAAGAAAGACAGGTGAAAACCAAAAAGTTCAAAAAAAACCTGC
TTAAAAAATCGAAAACGCATGCGGGAAAAT-AAAAAACAAACGCGCTTTCAGCCTATCCCAAAAAATTGCTGGAAGTCTT
TAAAGGAGCGCTCCCTAATTAGTTGCTCCCGCTCCC----------------------------------GAGAGCTCGG
CAGGCTCAGCAGTGTAAA-------------------------GTAAAGGCCGTCCGTCGCGGAGGCCAGCCCACCCGAT
GCCGGCCCAGATAGAATAGGGGTTATGCAAATCGACTGACGAACGCGCGCGCTAGTAGAAGGCGGGAACGCGAGAATACG
CGTCCGCCCGCGCCCACCCACGCGCGCCACACGTGTTCGGCGAAACACCCGACCCGACCCCGATTTGGAAGTGGCCTCAC
CTTTCCGTATAAAGCTGAGCTGCCTCAGCCGCAGCCGCCAATCCAGTCAAAATCCTCTGCC-------------CAGATC
CCCTTGCTCTGTTCCCACTGCCGCCGCCGGAGCCGCCGCGATGTCGA------------CGCCGACGCCGGCGCTACTAA
CCGACGAGGGCATGGCGAGGGTGCGCCGCAAGAAGGACTTCCGCCACATGGAGCGGGTGGACGGCCGCATGCTCAACGTG
CTGCAGGGCCTCGAGCTCCACGCCAACGTCTTCTCCCCCGACGAGCAGGCCAAGATCGTCGCCTGCGTCCTCGACCTCCA
GGACCAGGGCCGCCGCGGCCGCCTCCGAGGTACCCAACCCAACCTTCCCCCTCTTCTTCATCTCCAACACCCCTCCGATG
AATTCTCCCGT------------------GCTCCTTCTTCCATGCCCGATCTTGATCTGACGACCTCGATTCTTCTTC--
------------CAGAGCGGACCTACTCGGAGCCGCGCAAGTGGATGCGGGGCAAGGGCCGGGCGACGATCCAGTTCGGC
TGCTGCTACAACTACGCCGCCGACCGGGACGGCAACCCGCCGGGCATCGTGCGGGACGAGGCCGTCGACCCGCTGCCGCC
GCTGCTCGCCGCCATGGCGCGCCGCCTCGTGCTCTGGCGCGTGCTCCCGCCCTCCTGCGTGCCCGACAGCTGCATCGTCA
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------C---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GTCTACGACGTCGACGAC
TGCATCCCGCCGCACGTCGACCACCACGACTTCCTCCGCCCCTTCTGCACCGCCTCCTTCCTCACCGAGGCCCCAATCCT
CTTCGGGAAGGACATGAGGGTGGTCGCCCCCGGTGAGTTCTCCGCCGCGGCCTCCATCCCGCTCCCCGTGGGGTCGGTCC
TCGTGCTCGCCGGCAACGGCGCCGACGTCGCCAAGCACTGCGTCCCCGCCGTGCCGGCCAAGAGGATCTCCATCACGTTC
AGGAAGATGGACGCCTCC----AAGGTCCCGTTCGGGTTCCGGCCCGACCCGCTGCTGCAGAGCCTCGCCGCTGCGGTGG
TCCGGCCGGCGATGACGGCGGCGAGCGCGCCCCCGAACAGAGCGGCCTGGGAGCAGAGCAATGGCGAGGCGGCGAAGCAT
GCGGCGCCT---CAG---CAGCAGCACCAACCGGCGGCGCCTCTGTACAAGGCTGCTGCTGCTGTCAGGGCGGGACAGAC
ACAG------AGCCCCG---GGGGCGGCGTCTCTTTCAGCCTCTCCACCGACGAGTTCCCGGCGCTTGGTGCCTCGCCGG
CCAGCGGACGACGGCCGGGAAGGAGATAAAGAATTCGATTGTTTGAAACATGATGAGTTGAGAGATACTGTAC-------
-TTTAGTTTTGTTGGAGCTCATGTAGTATTAACGACATTCATCCATTCAT----CCGATGTATT-----------ACTAC
CACTCATCATCATAGGTT-AAAGAAAGAAAACTTGATATTAGTACATTGA----TGATGATGATGATTTACTCTGATTGC
GTTGGTTTGATGATCGACTACAATCTGCGGCTCATGAAATTTCAAAGATG-------------ACCGCCGATTTCTAAAT
ACTAATGGTGATTTACTATACATTTTCTTTTTACCATTATGTTCAGCATATTTTTTAGTTTTGTCTCCGCAAATAAAGTT
TAAACAGCAAGAAGAGGTGTGTTTCTTGATTCAGTTCATTACG----GCATCTCCAACACAAGCCCTCAAACTGCCTGCA
ACTGTTTGAACTGGGCGGTCCCAACACATTTCCATCCAACTCCCCATCTGTCCAAACCTAGGGGGTGGGGCTTTGTGGCC
GTTCAAACCT-TGCCACATACGCAACGGACACCCCGGATCCATTCAAAACCTCTCCCGTGCCCGCGTCCTCTCTCATGCC
AACCGGTTGCCACGCATTCATGCCGGCCCGCAGTGCGACTAGACGCGATGGGATGGCTATTTGCCGCATGCACAACGGTT
ACCCGTTCGCCTGCCTGTCGGCATTAAAAACTGGCGCGTTGGAGAAACCCACTCTGATGCCTGCTTGCCCTAGCTGGTGC
CCGCTATTTTATAATTGTCCATGCCCGACACCATCCGCACCGCACCACCGTCGCTCCCACTCCTTCTCACTGCACCACCT
CCGCCATGACCGCGAGCCCTAAAGTGACCTGGGATAACCTTACGGCAGAGCAAAGACACCATCTCTCGACTCATCTTAGA
GTAAATCATCATTAGAGAAACCCGAATTACTCTAGTTGATCTGGTATAATGATCAGCTCCAATCAGTGGTTCATGAAGTT
TCTAAGATAGACTATAAAAGTAGTGTGTTCAATTC
>chr2B_1
CCGTTGGATTTCTCACGTCGAGATCTTCAAAAACTAGATTCCATGTTGATAGGTTTTGACGAAAAAAATTCAAAAAAATC
GGATAGAAAAACGGACCGAAAAACCGAACCGGTATCAA-TTTTTTTCCTTTCCGAAAGAGGCACGGTTGTGCCTCTCGCG
AAAGCATAACCATGCCTCTTGTGAAAGGAAA-AAAACAGAAAACACATTTTTTTTTCCCATTTCCGAGAGACACGGCCGT
GCCTACCTCTCGCGGAAGAAAAAAAATAGGAAACACGTTGTTTTTGTTTTTGAGAGGCATGG-CGTGCCTCTCGCGGAAG
CATAACCATGCCTCTCGTGAAAG-------------------CGGAAGAAAGAAAACAGAAAACACGTTTTTTTCCGTTT
TCGAGAGGCATGGGCGTGCCTCTCGCGAACGAAAAACGGTGA--CTCGCGGAAGAAAAGAAATGTGTTTTTTCGTGCAAG
AAAAGGAATTTGAAAAAAAAAATTCTTGTGCAAAAGCGAAGAAAGACCAGTGAAAACAAAAAAGTC---AAAAAACTCGT
TTAAAAAATCAAAAACGCGTGCAGAAAAATAAAAAAACAAACACGCTCTCAGCCTATCCCAGATAATTGTTGGAAGTCTT
TAAAGGAGCGCC----AATTAGTTGCTCCCGCTCTGGAGAGTCGCTCACGCCAGCCCACGCGCGCCACAAGAGAGCTCGG
CAGGCTCAGCAGTGT-AA-------------------------GTAAAGGCCGTCCGTCGCGGAGGCCAGCCCACCAGAT
GCCGGCCTATATAGAATAGG--TTACGCAAATCGACTGACGAACGCGCGCGCTAGAAGAAGGCGGGAACCCGAGAATACG
CGTCCGCCCGCGCCCACCCACGCGCGCCCCACGTGTTCGACGAAACACCCAACCCGACCCCGATTTGGAAGTGACCTCTT
CTTTCCATATAAAGCTGAGCTACCTCAGCCGCCAAT-CCAATCGAATCCGCCCGCCCAGATC-----------------C
CCCTTGCTCTGTTCCCACTGCCGCCGCCGGAGCCGCCGCGATGTCGACGCCGACGCCGGCGCTGCTGC------------
CCGACGAGGGCATGGCGAGGGTGCGCCGCAAGAAGGACTTCCGCCACATGGAGCGCGTCGACGGCCGCATGCTCAACAAC
CTCCAGGACCTCGAGCTCCACGCCAACGTCTTCTCCCCCGACGAGCAGGCCAAGATCGTCGCCTGCGTCCTCGACCTCCA
GGACCAAGGCCGCCGCGGCCGCCTCCGAGGTACCTA---------------------------CCAACACTTCCCCGATG
AATCAAGCAATCAAT----------------TCCTTCTTCCTCCCCCGATCTTGATCTGACGAGCTCGGTTCTTCTCCGG
CGCGCGCGCGTGCAGAGCGGACCTACTCGGAGCCGCGCAAGTGGATGCGGGGCAAGGGCCGGGCGACGATCCAGTTCGGC
TGCTGCTACAACTACGCCGCCGACCGGGACGGCAACCCGCCGGGCATCGTGCGGGACGAGGCCGTCGACCCGCTCCCCCC
GCTCCTCGCCGCCATGGCGCGCCGCCTCGTGCTCTGGCGCGTGCTCCCGCCCTCCTGCGTCCCCGACAGCTGCATCGTCA
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------C---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GTCTACGACGTCGACGAC
TGCATCCCGCCGCACGTCGACCACCACGACTTCCTCCGCCCCTTCTGCACCGCCTCCTTCCTCGCCGAGGCCCCCATCCT
CTTCGGCAGGGACATGAGGGCCGTCGCCCCCGGGGAGTTCTCCGCCGCCGCCTCCATCCCGCTGCCCGTGGGGTCGGTCC
TCGTGCTCAACGGCAATGGCGCCGACGTCGCCAAGCACTGCGTCCCCGCCGTGCCGGCCAAGAGGATCTCCATCACGTTC
AGGAAGATGGACGCCTCC----AAGGTCCCGTACGGCTTCCGGCCTGACCCGCTGCTGCAGAGCCTCGCGGCTGCTGCCG
TCCGGCCGGCGATGACGGCGGCGAGCGCGCCCCCGAACAGAGCGGCCTGGGAGCAGAGCAATGGCGAGGCGGCCAAGCAT
GCGACACCT---CAGGCTCAGCGGCAGCAACCGGCGGCGCCTCTGTACCAGGCTGCTGCTGCTGTCAGGGCGGGACAGAC
ACAGTCACAGAGCCCCG---GCGGCGGAGTGCCTTTCAGCCTCTCCACCGACGAGTTCCCGGCTCTTGGTGCCTCGCCGG
CCAGCGGACGACGGCCGGGAAGGAGATAAAGAACTCAATTTTTTGAAAGATGATGAGTTGAGAGATACTGTAC-------
-TTCA-GTTTGTTGGAGCTCATGTATTAACAACAACATTCATTCATTCATTCATCCGATGTATTGCTAGTTTACTACTAC
CACTCATCATAGGTTAAAGAAAGAAAGAAAACTTGATATTAGTA-----TACACTGATGATGATGATCTATTCTGATAGC
GTTGGTTTGATGATCAACTACAATTCGTGGCTCGTGAAATTTCAAAGATGGCACTATCAAATGACCGGTGATAGCCAAAT
ACTAATAGTGATTTACTACGCATTTTCTTTTTACCACTATGTTCAGTAAATTTTTCAGTTTTGTCTCAT-AAATAAAGTT
TAAACATCAAGAACAGATGTATTCCTCGATTCAACTCACTGCGGCATGCATCTCTAACACAGACCCTCAAACTGTCTGCA
ACTGTTCGAACTGGGCGGTT--------------------------------CAAAACTAAGGGTTGGGGCTTTGTGGGC
GTTCAAACCTCTGCCACATACGCAACGGACACCCCGGATCCACCCAAAACCTCTCCCGCGCCCGCGTCCTCTCCCATGTC
AAGCGGTTGCCGCGCATTTATGCCAGCCCGTGGCGTAACTGGACGCGGCAGGATGGCTATCTACCACATTCACACTGG--
----------CTGCCTGGAGGCATG-AAAACATACGTGTTGGAGAAACCCACTCTGACGCCTGCTTGCCTTTGTCGGTGC
CCGCTATTTTATAGG-------------CACAATCCGCGCTGCACCCCCTTCGCTTCCGCTCCTCA------CACCACAT
CCGTCATGA-----AGCTCTATAGTGACGTGGGATAACCTTACGACGGAGCAAAAACACTATCTCTCGACTGATCT----
--------------------------------------------------------------------------------
-----------------------------------
>chr2D_670
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------AGAGCTCGG
CAGGCTCAGCAGTGT-AAAGGCTTCCCTAAAAAAAAAAGCAGTGTAAAGGCCGTCCGTCGCGGAGGCCAGCCCACCCGAT
GCCGGCCCAGATAGAATAGG--TTATGCAAATCGACTGACGAGCGCGCGCGCTAGAAGAAGGCGGGAACGCGAGAATACG
CGTCCGCCCGCGCCCACCCACGCGCGCCACACGTGTTCGATGAAACACCCGACCCGACCCCGATTTGGAAGTGGCCTCAG
CTTTCCGTATAAAGCTGAGCTACCTCAGCCGCCAAT-CCAATCCAGTCAAA-TCCTCTG-CCTCGTCCGCCCATCAGATC
CCCTTGCTCTGCCTCAGCCGCCGCCGCCGGAGCCGCCGCGATGTCGT------------CGCTGCTGC------------
CCGACGAGGGCATGGCGAGGGTGCGCCGCAAGAAGGACTTCCGCCACATGGAGCGCGTCGACGGCCGCATGCTCAACATC
CTCCAGGGCCTCGAGCTCCACGCCAACGTCTTCTCCCCCGACGAGCAGGCCAGGATCGTCGCCTGCGTCCTCGACCTCCA
GGACCAAGGCCGCCGCGGCCGCCTCCGAGGTATTAT--CCAACCTTCCCCCTCTTCTTC---TCCAACACTTCTCCGATG
AATCAATCAATCAAT----------------TCCTTCTTCCTCCCCCGATCTTGATCTGACGAGCTCGGTTCTTCTCCGG
CGCGTGTGACTGCAGAGCGGACCTACTCGGAGCCGCGCAAGTGGATGCGGGGCAAGGGCCGGGCCACGATCCAGTTCGGC
TGCTGCTACAACTACGCCGCCGACCGGGACGGCAACCCGCCGGGCATCGTGCGGGACGAGTCCGTCGACCCGCTGCCGCC
GCTCCTCGCCGCCATGGCGCGCCGCCTCGTGCTCTGGCGCGTGCTCCCGCCCTCCTGCGTGCCCGACAGCTGCATCGTCA
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------C---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GTCTACGACGTCGACGAC
TGCATCCCGCCGCACGTCGACCACCACGACTTCCTCCGCCCCTTCTGCACCGCCTCCTTCCTCGCCGAGGCGCCCATCCT
CTTCGGCAGGGACATGCGGGTGGTCGCCCCCGGGGAGTTCTCCGCCGCGGCCTCCATCCCGCTGCCCGTGGGGTCCGTGC
TCGTGCTCGCCGGCAACGGCGCCGACGTCGCCAAGCACTGCGTCCCCGCCGTGCCGGCCAAGAGGATCTCCATCACGTTC
AGGAAGATGGACGCCTCC----AAGGTCCCGTTCGGCTTCCGGCCCGACCCGCTGCTGCAGAGCCTCGCGGCTGCTGTGG
TCCGGCCGGCGATGACAGCGGCGAGCGCGCCTCCGAACAGATCAGCCTGGGAGCAGGGCCAGGGCGAGCCGGCCAAGCAT
GCCACACCTCAGCAG---CAGCAGCAGCAACCGGCGGCGCCTCTGTACCAGGCTGCTGCTGCTGTTAGGGCGGGACAGAC
ACAGTCACAGAGCCCCG---GCGGCGGAGTGCCTTTCAGCCTCTCCACCGACGAGTTCCCGGCGCTTGGTGCCTCGCCGG
CCAGCGGACGAAGGCCGGGAAGGAGATAAAAAACTCAATTTTTTGAAAGATGAT--------------TGTAC-------
-TTCA-GTTTGTTGGAGCTCCAT--GTATTAACGACATTCATTCATTCAT----CCCATGTA------------------
----------------TT-AAAGAAAGAAAACTTATATTACTATATGAGTACATTGATGATGATGATCTACTCTGATTGA
GTTGGTTTGATGATCCACTACAATCCGTGGCTCATGAAATTTCAAAGATGGCACTATCAAATGACCGCCGATTTCTAAAT
ACTAATAGTGATTTACTATACATTTTCTTTTTACCATTATGTTCAGCATATTTTTCAGTTTTGTCTCCGCAAATAAAGTT
TAAACAGCGAGAAGGGGTGTGTTCCTTGATTCAATTCATTACG----GCATCTCCAACACAAGCCC--------------
--------------------------------------------------------------------------------
--TCAAACCT-TGCCACATACGCAACGGACACCCCGGATCCATCCAAAACCTCTCCCGCGCCCGCATCCTCTCTCATCCG
CGCCCG--------------------------------------------------------------------------
------------------CGGCATTAAAAACAGGCGTGTTGGAGAAACCCACTCTGATGCCTGCTTGCCCTAGCTGGTCC
CCGCTATTTTATAATTGTCCATGCCTGACACAATCCGCACCGCACCACCGTCGCTCCCGCTCCTCCTCACTGCACCACCT
CCACCATGACCACGAGCCCTGAAGTGACCTGGGATAACCTTACGGCAGAGCAAAAATACTATCTCTCGACTCATCGTAGA
GTAAATCATCATTAGAGTAACCCGATTTACTCTAATTGATCTGCTATAATGATCAGCTCCAATCAGTGGTTCATGAAGTT
TCTAAGCTAGACTATAAAAGTAGTGGGTTCAATTC
>chr2D_777
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CGCGCGCGCTAGGTGAAGGCGGGAAGCCGCGAGTACG
CGTCCGCTCGCGCCCGACCACGCGCACCCCACGTGTTCCGCGAAACACCAGACCCGACCCCGATTTGGAAGTGGTCTCTC
CTCTCCATATAAAGCTGAGCTACCTCAGCCGCCAAT-CCAGTCA----AAA-TCCTCTGCCCTCGTCCGCCCATCAGATC
CCCTTGCTCTGCCTCAGCCG---CCGCCGGAGCCGCCGCGATGTCGA------------CGCTGCTGC------------
CCGGCGAGGGCATGGCGAGGGTGCGCCGCAAGAAGGACTTCCGCCACATGGAGCGCGTCGACGGCCGCATGCTCAACGTG
CTCCAGGGCCTCGAGCTCCACGCCAACGTCTTCTCCCCCGACGAGCAGGCCAAGATCGTCACCTGCGTCCTCGACCTCCA
GGACCAAGGCCGCCGCGGCCGCCTCCGAGGTACCCAACCTTCCTCTT----------------------CATCTCCAATG
AATCGATCAATCAATTCCCCTGCACGGGAGCTCCTTCTTCCTCCCCCGATCTTGATCTGACGAGCTCGATTCTTCTCCGG
CGCGTGTGACTGCAGAGCGGACCTACTCGGAGCCGCGCAAGTGGATGCGTGGCAAGGGCCGGGCGACGATCCAGTTCGGC
TGCTGCTACAACTACGCCGCCGACCGGGACGCCAACCCGCCGGGTATCGTGCGGGACGAGTCCGTCGACCCGCTGCCGCT
CCTCCTCGCCGCCATGGCGCGCCGCCTCGTGCTCTGGCGCGTGCTCCCGCCGACCTGCGTGCCTGACAGCTGCATCGTCA
ACGTTGTTGTTGCCGCTCTCTCTCACGTCGGACTAGAGGTAGAAGAAGAACAAGCACAATACACTGGAGTTTCACCAGGC
TGCACACATAGCCCCGTTACTATTCCCAGAGCGCAAAACTCATCACGACACACAGTCGTGGCCATGGCTTTTGTAGTACC
CCAGCAGCGCAACGCCCAAGTTTTCCATGCGCACGACGCGGCCAGCTTCACCGGTCGTTGCTAACTACTACCGTGCATGG
CTAGCCCACTAACCAACTGACTCCTTGCGTGTAGGCTGCTAAATCACATCCAGCCAACAACCTAGCTAGCTAACTCACAC
CACCACGCCACACACGTACTCACGCACCTACGAATCTGACACGGCCACACACCGCCATACACACACATACGCCACACTTT
TGCTGCGTTCCGCCTGTCCCGCACGCATCCGACGCGCCCGACAAGCCTGACACCACCAGTGCGCCCCGCACGTTCCGCGC
GCATCCGACGTGCCCGATGAGCCCGACCACACCACGCGACGTGGCTTATTCCAACAAAC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GTCTACGACGTCGACGAC
TGCATCCCGCCGCACGTCGACCACCACGACTTCCTCCGCCCCTTCTGCACCGCCTCCTTCCTTACCGAGGCGCCCATCCT
CTTCGGCAAGGACATGCGGGTGGTCGCCCCCGGGGAGTTCTCCGCCGCCACCTCCATCCCGCTGCCTGTGGGGTCCGTGC
TCGTGCTCAACGGCAACGGCGCCGACGCCGCCAAGCACTGCGTCCCCGCCGTGCCGGCCAAGAGGA-CTCCATCACGTTC
AGGAAGATGGACGCCTCCAATTAAGGTCCCGTTCGGCTTCCGGCCCGACCCGCTGCTGCAGAGCCTCGCGGCTGCTGCGG
TCCGGCCGGCGG---CTGCTAGGAGCGCGCCCCCTAGCAGAGCAGCCTGGGAGCAGAGCAATGGCGAGGCGGCGAAGCAT
GCGACACCACT---------GCAGCACCAACCGGCAGCGCCTCTGTACCAGGCTGCTGCTGC---CAGGGCGGGACAGAC
AAAGTCACGGAGCCCCG---GCGGCGGCGGCCCTTTCAGCCTCTCCACCGATGAGTTCCCGGCGCTTGGTGCCTCGCCGG
CCAGCGGACGACGGCCGGGAAGGAGATAAAGAACTTAATTTTTTTTAAA--GATGAGTCGAAAGATACCAGAGACAGAGA
GTGCA-TTTTGTTGGAGCTCATGTAGTATTAACAACATTTATTCTTTAAT----TCGGTGTA------------------
----------------CT-ACTGCTCATCATAACTTATTAAACAAACAAAA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
>chr2D_1280
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------GCTCCTTCTTCCTCCCCCGATCTTGATCTGACGAGCTCGATTCTTCTCCGG
CGCGTGTGACTGCAGAGCGGACCTACTCGGAGCCGTGCAAGTGGATGCGCGGCAAGGGCCGGGCGACGATCCAGTTCAGC
TGCTGCTACAACTACGCCGCCGACCGGGACGGCAACCCGCCGGGCATCGTGCGGGACGAGTCCGTCGACCCGCTGCCGCC
GCTCCTCGCCGCCATGGCGCGCCGCCTCGTGCTCTGGCGCGTGCTCCCGCCGACCTGCGTGCCCGACTGCTGCATCGTCA
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CGTTGTTGTTGCCGCTCTCTCT
CACGTCGGACTAGAGGTAGAAGAAGAAGAAGCACAATACACTGAAGTTTCACCCGGCTGCACACATAGCCCCGTTACTAT
TCCCAGAGCGCAAAACTCATCACAACACACAGTCGTTGCCATGGCTTTTGTAGTACCCCAGCAGCGCAACGCCCAAGTTT
TCCATGCGCACGACGCGGCCAGCTTCACCGGTCGTTGCTAACTACTACCGTGCATGGCTAGCCCACTAACCAACTGACTC
CTTGCGTGTAGGCTGCTAAATCACATCCAGCCAACAACCTATTCAGAAGTCTATCCTACCGGTCATGCACTCACCTAGCT
AGCTAACTCACACCACCACGCGCACACACGTACTCGCGCACCTACGAATCTAACACGGCCACACACCGCCATACACACAC
ATACGCCACACTTTTGCTGCCTTCCGCCCGTCCCGCATGCATCCGACGCGCCCGACAAGCCTGACACCACCAGCGTGTCC
CGCACGTCCCGCGCGCCCGACGAGTCCGACCACACCACGCGATGTGGCTTATTCCAACAAACGTCTACGACGTCGACGAC
TGCATCCCGCCGCACGTCGACCACCACGACTTCCTCCGCCCCTTCTGCACCGCCTCCTTCCTTACCGAGGCGCCCATCCT
CTTCGGCAAGGACATGCGGGTGGTCGCCCCTGAGGAGTTCTCCGCCGCCGCCTCCATCCCGCTGCCTGTGGGGTCCGTGC
TTGTGCTCAACGGCAACGGCGCCAATGTCGCCAAGCACTGCGTCCCCGCCGTGCCAGCCAAGAGGATCTCCATCACGTTT
TGGAAGATGGACGCCTCC----AAGGTCCCGTTCGGCTTCCGGCCTGACCCGCTGCTGCAGAGCCTCGCGGCTGCTGCGG
TCCGGCCGGCGG---CTGCTGGGAGCGCACCCCCTAGCAGAGCAGCCTGGGAGTAGAGCAATGGCGAGGCGGCGAAGCAC
GCGACACCACT---------GCAGCACCAACCGGCGGCGCCTCTGTACCAGGCTGCTACTGC---CAGGGCGGGACAGAC
AAAGTCACAGAGCCCCGACAGCGGCGGCGTCCCTTTCAGCCTCTCCACCGACGAGTTCCCGGCGCTTGGTGCCTCACCGG
CCAGCGGACGACGGCCGGGAAGGAGATAAAGAACTCAATATTTTTTAAA--GATGAGTTGAAAGATACCAGAGACAGAGA
GTGCA-GTTTGTTGGAGCTCATGTAGTATTAACAACATTTATTCTTTAAT----TCGGTGTA------------------
----------------CT-ACTGCTCATCATAACTTATTAAACAAACAAAA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
>SNPs
----------S-S----------------------------SS-------------------------------------
---S-S----------SS---SS-----SS--S-S---S------------S--------------------------S-
-------------------S-S-S-------S----S-S----S--S-S----------S--------------------
----S-------S----S--------------------------S-----------------S------------S----
----------------SS-SS-SSSSSSSSSSSSSSSSSSSS--------------S---------S-------S-----
-----------------------------S-S-----S-S--SS------------------------------------
-----S----S----SSSS------------SS----S---------SS--------S-------SSSS-------SS-S
----------S-------S---S-S-----------------S----S-------------S-S-----S----------
-----------SSSSS------------------SS--------------------------------------------
---------------S----------------------------------------------------------------
--------------------SS---------------------------------S------------------------
--------------------------------------------------------------------------------
---------------------S----------SSSSS--------------S----------------------------
--------------------------------------------------------------S-SS--SSSSSSSSSSSS
-------------------------------------------------------S--S---------------------
--S-----------------------------------------------------------------------------
------S----------------------------------------------------SSS--------SS--------
---SSSS-SS-------------------------------SSS-------------------S------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
------S--------------------------S-----------------------------S----------------
--------------------------------------------------------------------------------
------------------------------------S--------------------------------S-----S----
--------------------------------------------------------------------------------
---S-S------------------------------------------S-------------------------------
---------------------S---------S------------------------------------------------
---------------------------------S--S---S-------S-------------------------------
---S-S------------------------------------S-------------------------------------
----------SSSSSS----------------------------S-SS-------------------S------------
---------------S---------S-S----------------------------------------------------
------S------------------------------------------------S------------------------
-----------------------S---------S----------------------------------------S-----
------S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S---S---S-------------S-
-------------------------------------------S--------------S---------------------
-----------S------S-----S-----SS-S-SS---S------SSS----------S-S--S---S----SS--SS
SSSSSSSSSS-------S-------------S----S-------------------------------------------
-------------------------S-----S--------------------------S-----S---------------
-----------S------------------------------------------S----S--------------------
-----------------S-------S--------S--------S------------------------------------
------S------------------S---------
>forward_676
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------AATTAGTTGCTCCCGCTCCC--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
>reverse_2887
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GAAGGACATGAGGGTGGTCG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
>forward_1370
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------CCCTCCGATG
AATTCTCCCG----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
>reverse_4037
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GACTAGACGCGATGGGATGG------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
