>input_sequence_59371
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-----------------------------------------------------------------TTGAC-----TGCCA
TGACATGCATGTTACTCCCCTAGTGGTA------TAATCATGACAGCCCTATCATTCTCCATGTT-TTCTCAAGTGGCAA
TCATGGAGGCAAGTGTCTGTTATTATACACCTCTCATCTTGCATGGCGAGAACACCATGATTTTCATCCTAGTTGTCATG
CAACTTTCTCCCTGTCCCTGGTATAGTGTTTTCACCTTTGCAGTA-------CACTGCCCCTGTCTTCTCTCTTGTCAGT
AAATCTTGCTTCATTACCTTCCTCATTTGTGACGGAGCCTAACCAGTTACCAGTCTCTTCTCATAAACAGATCATGCCGT
GCGCCGCCGAGCTTGTCAACGGTGTGGGAGGCGCCATCAAAGTGGGCACAACCGGCACCATCGGCTCGCTCATGACGAGA
GAACTGGAGGCCATCAAGGTTGCGCCGCAAGGAGCTGCCACCCCGCGCCTGAGACGCCAAAGCAGTCCGGTTTGGGTGCC
CTGCGGCGCTAGCCCCCGGAAGATCATCCCAAGGAAGAGCTCGTCCAGTGTCTCCAGCAGCAGCAGCAATGGCAGAGCTG
ACCGTGTGAGCGCTGAAGAAGCCTGCAAGACGAGGAGGAGCTCTCAGCGGAACAAGTCCAGCTCCCCAATGCTGCACTCG
GATGGCGCGCTGGTTGACAGGAGCCCCAACTTCGAGAAGGCCAAGAAGAAAGGAAACGTGCATGGCGTCGAGGTGGTGGA
TGTCAGGTGCGGTAATCCGATGAGCAGCCGCCTCAGGAAGCTGGGTTTCTCCAAGCTGTCGGAGACCTTTGCCTAGCCCT
AACGGGAGATGACTGAAATCAAAGCTGCTGCTGCTGCTGCTGCTGCCCTTTCCTGGAGGGCATCTTGGGTTTCTTTGTGC
AAGCCTTTGGAGGGCAGTACGATGCCATCTTTGGTGAGCACAATCATTTCATCCACCTGACTGCATCCCTCTGTGTCGCG
ATCCCGTTTAGGTCAGCTTTCCTGCTCATGTGCTCTGATGCGTGGAAAGGTAGTCTATGAAAAGCATTTCCCGTCAGAAG
CTAGATGTCAAATTGTCAATGGATGATATAATGTAGTTCTCGGAAAACCTCGCGCTTCTGGAGTACTCCCTCCGTTCGGA
ATTACTTGTCGTGGAAATGGATGTATCTAG--------------------------------------------------
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------------------------------------------------------------------------------
>chr2A_1_TraesCS2A01G221100
TCAGTGTTCCTTAGATTAATGAGTTTGGCCGGCGCTGCCACATGATTTGGCGCCGCATTAGATTATTAATCAATCACTAG
ACCAGTAGCCCAAGGTATCCAAGAATAGATATGCAGAAAAAGAATGCGGCAGGAGGAAGGAAGTGGTAGGTTCTTTGCTT
TGGCCCAGTTGGCATTCCATCAAGTGATGCTTGATGCCATTTGTTTCTTGTTGCTGCTGCTGGTGCTAAAAATCATTATA
CTTACTTATTAGTAGTACTACCACTTCTCTGAAAGGGGATAACATACCAATGTGGCCTACTTAT----------------
------------------------------------------------------TAGTTTTT-GTAAGCTAAAACATTTT
TGTCTGAGAAGTAGGCCTACATGATATACAGTACATGGTCTAAAGGTAGGCATCAGTAGATGCACTGAGGAAATTAAGGC
AGAAAAGAAGGAGCAGAAAGCATTTGAGAAAAGGGGATAAAAATGTTTGTGT--CTAGTGCATCTTGACACCTCAGATGC
TGGTCAATTTGTCCTGAAAAGGCCCTCAATCAGAGGCTTAGATAACATGAGCTATACTTTTGAAAGCATGCTGAGATTTT
TCTTAATCCTTGTAATTGTTTGTCAACACTGCATTGGTTGT-----------------CCATTTGCTTCCTCCTTCTGGT
ACTAGTGTAATGTATTA--------------TACTCCTACTAGTTTCAGACTGTCGGTGCTCGGTCGCATCATGTAATTC
AACTCAACGTTGTGCAGAAAAAATATATCAGTTTTTCTGGGGAAAGTGGTGTCGTTCTTAAGCATATCTACAGTGTTTTT
ATTGTGTAAATCGTATTGGTACATGATGTGACTGCCCATCAGATTCTATCGGAACAAAGGTGTCATTTCTGCAATGATTC
GGTTAAATTTGTCATAACTCTT-GCATTAGGAGAATGAATTGATTAGATTTGTTGGGTGGACATGATAACTCTTGAATTA
GAAACACAAACTAGGCTGATTTGTTTTGTGGATACCACTAGTCCTCATCTCGGAACAGAAAGGGGTTGAC-----TGCCA
TGACATGCATGTTACTCCCCTAGTGGTA------TAATCATGACAGCCCTATCATTCTCCATGTT-TTCTCAAGTGGCAA
TCATGGAGGCAAGTGTCTGTTATTATACACCTCTCATCTTGCATGGCGAGAACACCATGATTTTCATCCTAGTTGTCATG
CAACTTTCTCCCTGTCCCTGGTATAGTGTTTTCACCTTTGCAGTA-------CACTGCCCCTGTCTTCTCTCTTGTCAGT
AAATCTTGCTTCATTACCTTCCTCATTTGTGACGGAGCCTAACCAGTTACCAGTCTCTTCTCATAAACAGATCATGCCGT
GCGCCGCCGAGCTTGTCAACGGTGTGGGAGGCGCCATCAAAGTGGGCACAACCGGCACCATCGGCTCGCTCATGACGAGA
GAACTGGAGGCCATCAAGGTTGCGCCGCAAGGAGCTGCCACCCCGCGCCTGAGACGCCAAAGCAGTCCGGTTTGGGTGCC
CTGCGGCGCTAGCCCCCGGAAGATCATCCCAAGGAAGAGCTCGTCCAGTGTCTCCAGCAGCAGCAGCAATGGCAGAGCTG
ACCGTGTGAGCGCTGAAGAAGCCTGCAAGACGAGGAGGAGCTCTCAGCGGAACAAGTCCAGCTCCCCAATGCTGCACTCG
GATGGCGCGCTGGTTGACAGGAGCCCCAACTTCGAGAAGGCCAAGAAGAAAGGAAACGTGCATGGCGTCGAGGTGGTGGA
TGTCAGGTGCGGTAATCCGATGAGCAGCCGCCTCAGGAAGCTGGGTTTCTCCAAGCTGTCGGAGACCTTTGCCTAGCCCT
AACGGGAGATGACTGAAATCAAAGCTGCTGCTGCTGCTGCTGCTGCCCTTTCCTGGAGGGCATCTTGGGTTTCTTTGTGC
AAGCCTTTGGAGGGCAGTACGATGCCATCTTTGGTGAGCACAATCATTTCATCCACCTGACTGCATCCCTCTGTGTCGCG
ATCCCGTTTAGGTCAGCTTTCCTGCTCATGTGCTCTGATGCGTGGAAAGGTAGTCTATGAAAAGCATTTCCCGTCAGAAG
CTAGATGTCAAATTGTCAATGGATGATATAATGTAGTTCTCGGAAAACCTCGCGCTTCTGGAGTACTCCCTCCGTTCGGA
ATTACTTGTCGTGGAAATGGATGTATCTAGATGTATTTTAGTTCTAGATACATCCATTTCCGAAACAAGTAATTCCGAAC
GGAGGGGGTAGCAGATAAGACTCCTAGACTTTTGAATTGAGTTGATGGTCTTAGGCCAACTCCAATCGCACGACCCTAAA
CCACGGACGTCCATTTTATTCGGATTTTGTTTGTTTCGGGATGGCAATGAGGCCATATCTGCCTAGATTTGTGTTTGCGC
CGGCCGGGCGTCCAACAGGTGGCCCCAGCAACCAGCAAAGAATATAGTCACTGGATCTCGAGATCTTCACAGTTTAAGTA
GCACCTCCGAGCATTGCCTCAGGCCTAGCCAGGGTCTGGCCACACTAGAAGTGGAGGG-------GCTCGCGCTTCCTGT
TCCAGATTTCTCACCAAGCACATCACCCTTTCTTTGACAGGGCCAGAGCATCGAACCATCCAACTGCCGAGAGTACAAGC
AATTTTCCTCCACAGAACCTGCATCCCAAGCCAGGATACATGATTGAAACAAATGTCATTACGATATTTCCATAGTGACC
ATAGGACAACAGAATGTAACATGCAGTCCGCTGGGTGATTTTTGTTATTAAACCACCAGGCCATTATGTCTTCAACGGAC
ATTCCAGCTCGCTTCTTGGATATATCAGAGATCACTCTCCACAGTTCTATGGCAACGACACAGTTAAAAAATAAATGATC
TACAGATTCAGATTTACCACAGAAAAGACTGGTAACATCCTCTACCTGCTGTCTTTTT-TGCAGATTATCTCTCGTTAAC
AGTTTGTTTTTGGCCATAAGCCAAAGAAAAATCTGAATCCTCAGGGGGACATTTATTTTCCAAATAACTGTCAAGTTACC
TAGCTGAATCTCCCTAAAATTAATAATGTTGTATAAAGATTTAACAGTATAAACTCCTTTAGCTTCATAGTTCCAGAGGA
TGGTATCCTCCTTATCCTCCAGAACAACATCACGAATGCGACTAAATAGACCATGCCAAATGGCTAGCATTTTTTGGT
>chr2B_1
TCAGTGTTCCTTAGATTAATGAGTTTGGCCGGCGCTGCCACATGATTTGGTGCCGCATTAGATTATTAATCAATCACTAG
ACCAGTAGCCCAAGGGATCCAAGAATAGATATGCAGAAAAAGAATGCGGCAGGAGGAAGGAAGTAGTAGGTTCTTTGCTT
TGGCCCAGTTGGCATCCCATCAAGTGATGCTTGATGCCATTTGTTTCTTCTTGCTGCTGTTGGTGCCAAAAATCATTATA
CTT----ATTAGTAGTACTACTACTTCTCTGAAAGGGGATAACATACCAATGTGGCCTACTTAT----------------
------------------------------------------------------TAGTTTTTTGTAAGCTAAAACATTTT
TGTCTGAGAAGTAGGCCTACATGATATACAGT--ATGGTCTAAAGGTAGGCATCAGTAGATGCACCGAGGAAATTAAGGC
AGAAAAGAAGGAGCAGAAAGCGTTTGAGAAAAGGGGATAAAAACGTTTGTGT--CTAGTACATCTTTACACCTCAGATGC
TGGTCAAATTGTCCTGAAAAGGCCCTCAATCAGAGGCTTAGATAACATGAACAATACTTTAGAAAGCATGCTGGGATTTT
TTTTAATCCTTGTAATTGTTTGTCAACACTGCATTGGTTGTAGCAACAGGTTGGTTGTCCATTTGCTTCCTCCTTCTGGT
ACTAGTGTAATGTATTA--------------T------ACTAGTTTCAGACTGTCGGTGCTCCGTCGCATCATGTA---C
AACTCAACGTTGTGCAGAAAAAATATATCAGTTTTTCTGGGGAAAGCGGTGTCGTTCTTAAGCATATTTACAGTGTTTTT
ATTGCGAAAATCGTATTGGTACATGATGTGACTGCTCATCAGATTCTATTGGAACAAAGGTATCATTTCTGCAATGATTC
GGTTAAATTTGTCATAACTCTTGGCATTAGGAGAATGAATTGATTAGATCTGTTGGGTGGACATGATAACTCTTGAATTA
GAAAAACACACTAGGCTGATTTGTTGTGTGGATACCACTAGTCCTCATCTCGGAACAGAAAGGGGTTGAC-----TGCCA
TGCCATGCATGTTACTCCCCTAGTGGTACTGGTATAGTCATGACAGCCCTATCCTTCTCCATG-T-TTCTCAAGTGACAA
TCATGGAGGCAAGTGTCCGTTATTATACACCTCTCATCTTGCATGGAGGAAACACCATGATTTTCATCCTAGTTGTCATG
CAACTTTCTCCCTGGT------------TTTTCACCTTTGCAGTATACTGTACACTGCCCCTGTCTCCTCTCTTGTCAAT
AAATCTTGCTTCATCACCTTCCTCATTTGTGACAAAACCTAACAAGTTACTAGTGTTTTCTCAGAAAGAGATCATGCCGT
GCGCCGCCGAGCTTGTCAACGGTGAGGGGGGCGCCATCAAAGTGGGCACAACCGGCACCATCGGCTCGCTCATGACGAGA
GAACTGGAGGCCATCAAAGTCACGCCGCAAGGAGCTGCCACCCCGCGCCTGAGACGCCAAAGCAGTCCGGTTTCGGTGCC
CTGCGGCGCTAGCCCCCGGAAGATCATCCCAAGGAAGAGCTCGTCCAGTGTCTCCAGCAGCA---GCAATGGCAGAGCTG
ACCGTGTGAGCGCTGAAGAAGCCTGCAAGACAAGGAGGAGCTCTCAGCGGAACAAGTCCAGCTCCCCAATGCTGCACTCG
GACGGTGTGCTGGTTGACAGGAGCCCCAACTTCGAGAAGGCCAAGAAGAAAGGAAATGTGCATGGCGTCGAGGTGGTGGA
TGTCAGGTGCGGTAATCCGATGAGCAGCCGCCTCAGGAAGCTGGGTTTCTCCAAGCTGTCGGAGACCTTTGCCTAGCCCT
AACGGAAGATGACTGAAATCAAAGCTGCTGCTGTTGT---TGCTGCCCTTTCCTGGAGGGCATCTTGGGTTTCTTTGTGC
AAGCCTTTGGAGGGCAGTACGATGCCATCTTTGGTGAGC-CAATCATTTCATCCACCTGACTGCATCCCTGTGTGTCGCA
ATCCCGTTTAGGTCAGCTTTCCTGCTCATGTGCTCTGATGCGTGGAAAGGTAGTCTA-GAAAAGCATTTCCCATCAGAAG
CTAGATGTCAAATTGTCAATGGATGATATAATGTAGTTCTCGGAAAACCTG--GCTTCTGGAGTACTCCCTGCGTTCTGA
AATA----------------------------------------------------------------------------
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>chr2D_1
TCAGTGTTCCTTAGATTAATGAGTTTGGCCGGCGCTGCCACATGATTTGGCGCCGCATTAGATTATTAATCAATCACTAG
ACCAGTAGCCCAAGGTATCCAAGAATAGATATGCAGAAAAAGAATGCGGCAGGAGGAAGGAAGTAGTAGGTTCTTTGCTT
TGACCCAGTTGGCATCCCATCAAGTGATGCTTGATGCCATTTGTTTCTTGTTGCTGCTGTTGGTGCCAAAAATCATTATA
CTT----ATTAGTAGTAGTGCTACTTCTCTGAAAGGGGATAACATACCAATGTGGCCTACTTATTACTCCCTCCGTCCCA
TAACATAAGAACGTGTAGTGTCAAAAACGTCCTTATATTTTAGGACAGAGGGAGTAGTTTTTTGTAAGCTAAAACGTTTT
TGTCTGAGAAGTAGGCCTACATGATATACAGT--ATGGTCTAAAGGTAGGCATCAGTAGATGCACCGAGGAAATTAAGGC
AGAAAAGAAGGAGCAGAAAGCATTTGAGAAAAGGGGATAAAAATGTTTGTGTGTCTAGTGCATCTTTACACCTCAGATGC
TGGTCAAATTGTCCTGAAAAGGCCCTCAATCAGAGGCTTAGATAACATGAACAAAACTTTTGAAAGCACGCTGAGATTTT
TTTTAATCTTTGTAATTGTTTGTCAACACTGCATTGGTTGTAGCAACAGGTTGGCTGTCCATTTGCTTCCTCCTTCTGGT
ACTAGTGGAATGTACTGTATTATACTCCTACT------ACTAGTTTCAGACTGTCGGTGCTCGGTCGCATCAAGTAATTC
AACTCAACGTTGTGAACAAAAAGTATATCAGTTTTTCTGGGGAAAGTGGTGTCGTTCTTAAGCATATCTACAGTGTTTTT
ATTGCGAAAATCGTATTGGTACATGATGTGACTGCCCATCAGATTCTATCGGAACAAAGGTGTCATTTCTGCAATGACTC
GGTTAAATTTGTCGTAACTCTT-GCATTAGGAGAATGAATTGA---------------------------------ATTG
GGAAAACAAACTAGGCCGATTTGTTGTGTGGATACCACTAGTCCTCATCTCGGAACAGAAAGGGGTTGACTGCCATGCCA
TGCCATGCATGTTACTCCGCTAGTGGTA------TAATCATGACAGCCCTATCATTCTCCATG-TTTTCTCAAGTGACAA
TCATGGAGGCAAGTGTCTGCTATTATACACCTCTTATCTTGCATGGAGGAAACACCATGATTTTCATCCTAGTTGTCATG
CAACTTTCTCCCTGGT------------TTTTCACCTT-----------------TGCCCCTGTCTCCTCTCTTGTCAAT
AAATCTTGCTTCACCACCTTCCTCATTTGTGACAAAACCTAACAAGTTACCAGTCTCTTCTCATAAACAGATCATGCCGT
GCGCCGCCGAGCTTGTCAACGGTGAGGGGGGCGCTATCAAGGTGGGCACAACCGGCACCATCGGCTCGCTCATGACGAGA
GAACTGGAGGCCATCAAAGTCGCGCCGCAAGGAGCTGCCACCCCGCGCCTGAGACGCCAAAGCAGTCCGGTTTCGGTGCC
CTGCGGCGCTAGCCCCCGGAAGATCATCCCAAGGAAGAGCTCGTCCAGTGTCTCCAGCAGCA---GCAATGGCAGAGCTG
ACCGTGTGAGCGCTGAAGAAGCCTGCAAGACGAGGAGGAGCTCTCAGCGGAACAAGTCGAGCTCCCCAATGCTGCACTCG
GATGGCGCGCTGGTTGACAGGAGCCCCAACTTCGAGAAGGCCAAGAAGAAAGGAAATGTGCATGGCGTCGAGGTGGTGGA
TGTCAGGTGCGGTAATCCGATGAGCAGCCGCCTCAGGAAGCTGGGTTTCTCCAAGCTGTCGGAGACCTTTGCCTAGCCCT
AACGGAAGATGACTGAAATCAAAGCTGCTGC---------TGCTGCCCTTTCCTGGAAGGCATCTTGGGTTTCTTTGTGC
AAGCCTTTGGAGGGCAGTACGATGCCATCTTTGGTGAG-ACAATCATTCCATCCACCTGACTGCATTCCTGTGTGCCGCG
ATCCGGTTTAGGTCAGCTTTCCTGCTCATGTGA--TGATGCGTGGAAAGGTAGTCTATGAAAAGCATTTCCCATCAGAAG
CTAGATGTCAAATTGTCAATGGATGATATAATGTAGTTCTCGGAAAACCTCGC-CTTCTGGAGTA---------------
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>chr1A_2379
CCCCG---------------------------------------------------------------------------
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---------------------------GCAACCAGCAAAGAACATAGTCACTGGATCTCGAGATCTTCACGATTTAAGTA
GCACCTCCGAGCATTGCCTCAGGCCTAACCAGGGTCTGGCCACATTAGAAGTGGAGGG-------GCTCGCGCTTTCTGT
TTCAGATTTCTCACCAAGTACATCACCCTTTCTTTGACAGGGCCAGAGCATCGAACCATCCAACTGCCGAGAGTACAAGC
AGTTTTCCTTCACAGAACCTGCATCCCAAGCCAGGGTACATGATTGAAACAAATGTCATTACGATATTTCCATAGCGACC
ATAGGACAGCAGAATGTAACATGCAGTCCGCTGGGTGATTTTTGTTATTAAACCACCAGGCCATTATGTCTTGAACGGAC
ATTCCAGCTCGCTTCTTGGATATATCAGAGATCACTCTCCACAGTTCTATCGCAACGACACAGTTAAAAAATAAATGATC
TACAGATTCAGATTCACCACAGAAAAGACAGATAACATCCTCTACCTGCTGTCTTTTT-TGCAGATTATCTCTTGTTAAC
AGTTTGTTTTTGGCCATAAACCAAAGAAAAATCCGAATCCTCAGGGGGACATTTATTTTCCAAATAACTGTTAAGTTACC
CGGCTGAATCCCCCTAAAATTAATAATGTTGTATAAAGATTTAACAGTATAAACTCCTTTAGCTTCATAGTTCCAGAGGA
TGGTATCCTCCTTATCCTCCAGAACAACATCACGAATGCGACTAAATAGATCATGCCAAATGGCTAGCATTTTTTGGT
>chr2D_2419
ATCG----------------------------------------------------------------------------
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------------------------------------------------------------------TCACGGTTCGAGCA
GCACCTCCGAGCACTGCATCAGGCCTAGCCAGGGTCTAGCCACATTAGAAGGGGAGGG-------GCTCGCGCTTCCTGT
TCCAGATTTCTCACCAAGCGCATCACCCTTTCTTTGATAGGGCCAGAGCATCGAACCATCCAACTGCCTAGAGTACAAGT
AGTTTTCCTCCACAGGACCTGCATCCCAAGCCAGGGAACATGATTGAAACATACGTCATTGCGATATTTCCATAGAGACC
ATAGGACGGCAGAATGTAGCATGCAGTCCGCTGGGTGATTTTTGTTATTAAACCACCAGGCTATCATGTCTTCAACAGAC
ATTCCAGCACGCTTTTTGGATATATCAAAAATCACTCTCCACAGTTCTATCGCAACAACACAGTTAAAAAATAAATCTTC
AACAGATTCAGATTCACCACAGAAAAGACAGGTAGTATCCTCTACCTGTTGTCTTTTT-TGCAGATTATCTCTAGTTAAA
AGTTTGTTTTTGGCCATATGCCAAAGAAAGATCTGAATCCTCAGGGGGACATTGATTTTCCAAATAACTCTTATGTTACC
CGGCTGTACCCCCCTAAAATTAACAATGTTGTAGAAAGATTTAACAGTGTAAACACCCTTAGCTTCATAATTCCAGAGGA
TGGTATCTTCCTTATCCTCCAGAACAACATTACTAATGCGACTAAATAAATCATTCCATTCAACTAGCATTTTTTGGT
>chr5D_2423
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------------------------------------------------------------------TCACGGTTTGTGCA
GCACCTCCGAGCACTGCAGAAGTCCTAGCCAGGGTCTGGCCACATCAGGAGG---GGG-------GCTCGCGCTTCCTGC
TCCAGCTTTCTCACCAAGTGCATCACCCTTTCTTTGACAGGGCCAGAGCATCGAACCATCCAACTGCCTAGCGTAGTAGC
AGTTTTCCTCCACAGCACTTGCATCCCAAGCCAGGGGACATGATTGAAACAAATGTCGTTACGATATTTCCATAGAGTCC
AAAGGACATCAGAATGTAGCAGACAGTTTGCCGAGTGATTTTTGTTATTAAACCACCAGGCCAGCATGTCATCAACGGAC
ATTTCAGTGTGCTTATTAGATATATCAAAAATCACTCTCCATAGTTCTATCGCAACAACACAGCCAAAAAATAGATGTTC
AATAGATTCAGATTCACCACAGAAAAGACAAGTAGTATCTTCTACATGTTGTCTTTTT-TGCACATTATCTCTCGTTAAT
AATTTGTTTTTGGCCATGAGCCAGAGAAAGATCTGAATCCTCAGGGGGACATTGATATTCCAAATAACTGGTAGGTTACC
CGGCCTAATCCCCCTAAAATTAACAATGTTGTAAAAAGATTTTACAGTGTAGACACCCTTCGCTTCATAATTCCAGCGAA
TGGCATCTTCCCTGTCCTCCAGATTAACATTACTAATGCGGCTGAACAGATCATTCCAATCAGCTAACATTTTTTGG-
>chr7A_2434
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-----------------------------------------------------------------------------GTA
GCACCTCCGAGCACTGCAGGAGGCCTAGCCAGGGTCTGGCCACATCAGGAGG---GGG-------GCTCGCGCTTCCTGC
TCCAGCTTTCTCACCAAGTGCATCATCCTTTCTTTGACAGGGCCAGAGCATCGAACCATCCAACTGCCTAGTATAGTAGC
AGTTTTCCTCCACATGATCTGCATCCCAAGCCAGGGGACATGATTAAAACAAATGTCATTATGATATTTCCATAGAGCCC
ATAGGACAGCTGAATGTAGCAAACAGTCCGTTGAGTGATTTTTGTTATTAGACCACCAGGCCAGCATGTCATCAACGGAC
ATTCCAGCATGCTTATTGGATATATCAAAAATTACTCTCCATAGTTCAATCGCAACAACACAGCCAAAAAA--AATGTTC
AATTGATTCAGATTCACTACAGAAAAGACAAGTAGCATCTTCTACATGTTGTCTTTTTTTGCAGATTATCCCTCGTTAAT
AATTTGTTTTTGGCCATAAGCCAGAGAAAAATCTGAATCCTCAGGGGGACATTGACTTTCCAAATAACTGGCAGGTTACC
CAGCCGAACCCCCCTAAAATTAACAATGTTGTAGAAAGATTTTACAGTGTAGACACCCTTAATTTCATAATTCCAGAGGA
TTGTATCTTCCATGTCCTCCAGCTTAATATTAATAATGCGACTGAATAGATCATTCCAATCAGCTAGCACTTTTTGG-
>chr3D_2434
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-----------------------------------------------------------------------------GTA
GCACCTCCGAGCACTGCAGAAGGCCTAGCCAGGGTCTGGCCACATCAGGAGG---GGG-------GC----GCTTCCTGC
TCCAGCTTTCTCACCAAGTGTATCACCCTTTCTTTGACAGGGCCAGAGCATCGAACCATCCAACTGCCTAGCATAGTAGC
AGTTTTCCTCCACAACACCTGCATCCCAAGCCAGGGAACATGATTGAAACAAATGTCGTTACGATGCTTTCACAGAGTCC
AAAAGACAGCAGAATGTAACAAACAGTCCGCTGAGTGATTTTTGTGATTAAACCACCAGGCCAGCATGTCATCAACGGAC
ATTCCAGCTTGCTTGTTAGATATATCAAAAATCACTCTCCATAGTTCTATCGCAACAACACAACCAAAAAATAGATGTTC
AATAGATTCAGATTCACCACAGAAAAGACAAGTAGCATCTTCTACTTGCTGTCTTTTT-TGTAGATTGTCTCTCGTTAAC
AACTTGTTTTTGGCCATAAGCCAGAGAAAGATCTGAATCCTCAGGGGAACGTTGATATTCCAAATAACTGTTAAGTTACC
CGGCCTAACCCCCCTAAAATTAACAATGTTGTAGAAAGATTTAACAGTATAGACACCCTTAGCTTCATAATTCCAGTGGA
TGGTATCTTCCCTGTCATTTAGATTAATATTAATAATGCGACTAAACAGATCATTCCAATCAGCTAGCATCTTTTGG-
>chr7D_2436
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-------------------------------------------------------------------------------A
GCACCCCCAAGCACTGCAGAAGGCCTAGCCAGGGTCTGGCCACATCAGGAGG---GGGGGG----GCTCGCGCTTCCTGC
TCCAGCTTTCTCACCAAGTGCATCACCCTTTCTTTGATAGGGCCAGAGCATCGAACCATCCAACTGCCTAACATAGAAGC
AGTTTTCCTCCACAGAACCTGCATCCCAAGCCAGGGGACATGATTGAAACATATGTCATTACGATATTTCCACAGAGTCC
AAAGGACAATAGAATGTAGTAAACAGTCCGTTGGGTGATTTTTGTTATTAAACCACCAGGCTAGCATGTCATCAACGGAC
ATTCCAGCGTGCTTATTGGATATATCAAAAATCACTCTCCATAGTTCTATCGCAACGACACAGCCAAAAAATAAATGTTC
AATAGATTCAGATTCACCACAGAAAAGACAAGTAGTATCCTCTACATGTTGTCTTTTT-TGTAGATTATCTCTCGTTAAT
AATTTGTTTTTGGCCATAAGCCAGAGAAAAATCTAAATCCTCAGGGGGACATTGATTTTCCAAATAACTGGCAGGTTACC
CGGGCAAACCCCCCTAAAATTAACAATGTTGTAGAAAGATTTAACAGTGTAGACACCCTTAGCTTCATAATTCCAGAGAA
TGGTATCTTTCCTATCCTCCAGATTAACATTATTAATGCGACTGAACAGATCATTCCAATCGGCTAACATTTTTTGGT
>chr5B_2436
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-------------------------------------------------------------------------------A
GCACCTCCGAGCACTTCAGAAGGCCTAGCCAGGGTCCGGCCACATTAGAAGG---GGAGGGGGTCAC----GCTACCTGC
TCCAGCTTTCTCACCAAGTGCATCACCCTTTCTTTGACAGGGCCAGACCATCGAACCACCCAACTGTCTAGCATAGTAGT
AGTTTTCCTCCACAGAACCTGCATCCCAAGCTAGGAAACATGATTGAAACAAATGTCATTACGATATTTCCACAAAGTCC
AAAGGACAGCAGAATGGAGTAAACAGACCGCTGGGTGATTTTTGTTATTGAACCACCATGCCAGCATGTCATCTACGGAC
ATCCCAGTGTGCTTATTGGATATATCAGAAATCACTCTCCATAGTTCTATCGAAACGACACATCCAAAAAATAAATGCTC
AATAGATTCAGATTCACCATAGAAAAGACAAGTAGCATCTTCTACATGCTCTCTTTTT-TGAAGATTATCTCTAGTTAAT
AATTTGTTTTTAGCCATTAGCCAAAGAAAAATCTGAACCCTCAGGGGGATATTGATATTCCAAATAACTGGCAGGTTGCC
CGGCCGAATCTCCCTAAAATTATCAATGTTGTAGAAGGATTTCACAATGTAGACACCTTTAGCTTCATAGTTCTAGTGTA
TGGTATCTTCTCTGTCATCCAGAGTAACATTAATAATGCGACTGAATAGATCGTTCCAATCAGCTAACATTTTGTG--
>chr7D_2442
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-----TCCGAGCACTGCATCAGGCCTAGCCAGGGTCTGGCCACATTAGAAGG---GGAGGGGCTCGC----GCTTCCTGT
TCCAGATTTCTCACCAAGCGCATCACCCTTTCTTTGACAGGGCCAGAGCATCGAACCATCCAACTGCCTAGAGTACAAGC
AGTTTTCCTCCACAGGACCTGCATCCCAAGCCAGGGGACATGATTGAAACATATGTCATTGCGATATTTCCACAGAGACC
ATGGGACAGCAGAATGTAGCATGCAGTCCGCTGGGTGATTTTTGTTATTAAACCACCAGGCTATCATGTCTTCAACAGAC
ATTCCAGCGCGCTTTTTGGATATATCAAAAATCACTCTCCACAGTTCTGTCGCAACAACACAGTTAAAAAATAAATGTTC
AACAGATTCAGATTCACCACAGAAAAGGCAGGTAGTATCCTCTACCTGTTGTCTTTTT-TGCAGATTATCTCTAGTTAAC
AGTTTGTCTTTGGCCATAAGCCAAAGAAAGATCTGAATCCTCAAGGGGACATTGATTTTCCAAATAACTATTATGTTACC
GGGCTGTACCCCCCTAAAATTAACAATGTTGTAGAAAGATTTAACAGTGTAAACACCCTTAGCTTCATAATTCCAGAGGA
TGGTATCTTCCTTATCCTCCAGAACAACATCACTAATGCGACTAAATAGATCATTCCATTCAGCTAGCATTTCTTGGT
>chr7D_2493
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--------------------------------------------------------GG-------GCTCGCGCTTCCTGT
TCCAGCTTCCTCACTAAGTGCACCACCCTTTCTTTGACAGGGCCAGAGCATCGAACCATCCAACTGCCTAGAGTACAAGT
AGTTTTCCTCCACATGACCTGCATCCCAAGCCAGGTAATATGATTGAAACATATGTCATTGCGATATTTCCACAGAGACC
AAAGGACAGCGGAATGTAGCAAGCAGTCCGCTGGGTGATTTTTGTTATTAGACCACCAGGCTAGCATGTCTTCAATGAAC
ATACCAGGGCGCTTTTTGGATATATCAAAAATCACTCTCCAAAGCTCTATCGCAACGACACAGTTAAAAAATAAATGCTC
AACAGATTCAGATTCACCACAGAAAAGACAGGTAGTATCCTCTACATGTTGTCTTTTT-TGCAGATTGTCTCTAGTTAGA
AGTTTGTTTTTGGCCATAAGCCAAAGAAAGATTTGAATCCTCAGGGGGGCATTGATTTTCCAAACAATTGGCAGGTTACC
CGGCTGCAT-CCCCTAAAATTAACAATGTTGTAAAAAGATTTAACAGTGTAAACATCCTTAGCTTCATAATTCCAGAGGA
TGGTATCTTCCTTATCCTCCAGAACAACATTAATAATGCGACTAAACAGATCATTCCATTCAGCTAACATTTTTTGGT
>SNPs
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
---------------S-------------------------------------------S------S-------------
---SSSS--------------S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------SS-------------------------------S--------------
------------------------------------------------------------------S-------------
-------S------------------------------------------S-S---------------------------
-S------------------------------------------------------------------------------
--------------------------------SSSSSS------------------------------------------
--------------------------------------------------------------------------------
----S-S-------------------------------------------------------------------------
-------------------------------------------------S------------------------------
----S--------------------S------------------------------------------------------
--S------------------------------------------------------------S------------S---
----------------------------------------------S-SS------------------------------
--------------SSSSSSSSSSSSSS--------------------------------------S-----------S-
--------------S------------------SS-S------S------------------------------------
------------------------S---S---------------------------------------------------
-----------------S--S----------------------------------------------------S------
--------------------------------------------------------------SSS---------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
-----S---------------------------S--SSSS----------------------------------------
----------------------------------------------------------------------S---------
------------------------------------------------------------------------S-------
-----------------------------------------------------------------------S-----S--
-S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S---------------------------S---------
--------------------------------------------S-----------------------------------
--------------------------------------------------------------------------------
-S-------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
--------------S--------------S--------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------S---------------------------
>forward_145
--------------------------------------------------------------------------------
----------------------------------------------CGGCAGGAGGAAGGAAGTG---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_2071
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------CTGTGTCGCG
ATCCCGTTTA----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_1302
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--ACTTTCTCCCTGTCCCTGGT----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_2380
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------CTCCAATCGCACGACCCTAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
