>input_sequence_59370
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---ATGAATCGCCGTTTCGTCAATCTGCTGGTCAATAGGTTGTGCGCCCCTCGACCCGCTTACAGGCTGCACTGCATCGA
CCCCGCAACCTTGTTTTACCCTACCGGATCGCCACAGCCAGCAGATCCAGCTGCCATAAACGACAGC------------G
CTCCAGCTCCTGGGAGGTTGCCTGCGCCCACCATATCCTTCGACTGGCCCTGCAAGCCGCACCAATCCGGCTGGATGGAT
TTCATGGCCTTCAAGAACAACATCATTGCCGTCGACCACGAGGGCCGCACGCTCCTCTACGACACCGCCTCCAGGGCAGT
CCGGGCCTTGAACCCGATGCAACCCCCTCTGCGGTCATACAACATATTCGTCACAGTAGGCGACAGCCTGTATGTCATGG
CGAGCGAGGCTGGCTTGGGATCCCGGCTTATATGGTTCCATGCTCTCATCTACGGCCAGCCGCCCGATTTCATAGGTCAG
CAGGACTGGTACTGGCGTCCTCTCGACCTGCCTTGCTTTGATTATGAGGGTGCTAATTACAAGTCGGATCTGCCTCACTC
TGATTACGACTCGGATGCTGATGAGGACTGGAATGCTGATTACACGGATTCTGCAGATGATACAAACACCAATGAGTCAC
CACACCCCTGTGCGATCTGTGCCTACACGGTGGTTGGTAATTCACAGATCTGGGTATCCACACTGGGCGCTGGCACGTAC
TCCTTTGACATCGTGAGTGGCACGTGGAGCAAGGTCGGCATGTGGGTGCTGCCGTTCAGAGGCCGTGCTGTTTACGTCCC
CGAGCACAACCTCTGGTTTGGCTTCTCAGATAAAGACGATCAGCTCTGTGCGGTTGACCTTGCTCTGACGCAGCCGGTGC
TCCAGAAGGTGTTAGAAGACCCACCTCTGCCCGAGGCGTGTTCCCGGATGGCTTCCCATCTTCTTCATTTGGGCTCTGG-
-------CAAGTTGTGCGTGCAAAGGCTGTTCCAGAAGACACAGCAGGGGAGCCTTCTTCAGTCAGTTCCCAGTGATGAG
AAAGATGAAGGTTTTGCCGTGCTCGCTGGTGTGGAAGTTCGGCGCGATGATGGCATTGGAGACCTTCAGATGATCAAGCA
CAAGTCCATGCATTATGGTTTTGATGAAAATGGCGTCAAGCTGCTGTGA-------------------------------
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>chr2A_1_TraesCS2A01G113400
TCTCACTGTTTAATGTATACACGCCGCGCGAATTTCTAAGAACTAAGAGCAGCGGAAGAAAAAAAA--TCAAAA-GTTTT
GACCATTAAACATTTTTTTGATATATGCTGAACAATTCTTAAAAACACACTGAACATTTTTTTGATATACACTGAACATT
TTGTAAGTACACAATGAACATTGTTATAAA-TACGT----------------------TGAACATTTT------------
----------GTTAAATGTGTGATTA---TT-TTTTTGTAACACACAATGAACA-TTTTTATAAACGCAAGGTGAAT-TT
TTTTGCAATATATGTTGAACATTTCCTTAATATACGATGAACATTTTT-TGTCATACACAGCGAACTTTTTATATAATAC
CAAAAAATGAGAAG---------AAAAAGGAAAATAAGAAAATAAATGAAAAGGTAAAAGGGAAC---------------
-AAAAAAACCATAACAAAACCACTGAAAACCGGACAAAACAGTGAAAAGA-CCGGAAGC-AAAAACAGCACAGAAGAAAA
ACGAA-AAA-A-AA---AACACGAAACAGCGAGGGAAAGCAGCAGGGAAGGGATAAACAGGCGAATCCCGCACGTGGGCC
GGCCCAACCAGACGCTAG-CCTCAGCGAAGGCAGGACGTTTGGACGCTAACGAGCGTCATATAGGATCCACCTCCCTCTT
GCGCCGCCTCTATATCAGAACCTCACGCACCTTC-----CTCCTTCATCCCCTTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTGGCCGACTCCAACATCCCGGTTTGTCCGCTGCCTGCTGAAGGATCCCTGCCTGCTC
CCTCCCTTGGCCAGGTATGACCCTGATTTCCGATCCTATTTCTCTACATATGTGGATTCTTCACTCGATCTCACTTGGAG
AAGACGCCGATATCAACAATTAACTAGTCCATGCTCTTCTTTT-TTATTTGTCAGTTCATTCAAATAGAAGAAAGGAAAA
ATAAGCCAGATTTCTGTCTATTAGATC-----------------------------------------------------
-------------------------------------------------------GAGGCAGAGAGAGATTTGAAGCGGA
ACCATGAATCGCCGTTTCGTCAATCTGCTGGTCAATAGGTTGTGCGCCCCTCGACCCGCTTACAGGCTGCACTGCATCGA
CCCCGCAACCTTGTTTTACCCTACCGGATCGCCACAGCCAGCAGATCCAGCTGCCATAAACGACAGC------------G
CTCCAGCTCCTGGGAGGTTGCCTGCGCCCACCATATCCTTCGACTGGCCCTGCAAGCCGCACCAATCCGGCTGGATGGAT
TTCATGGCCTTCAAGAACAACATCATTGCCGTCGACCACGAGGGCCGCACGCTCCTCTACGACACCGCCTCCAGGGCAGT
CCGGGCCTTGAACCCGATGCAACCCCCTCTGCGGTCATACAACATATTCGTCACAGTAGGCGACAGCCTGTATGTCATGG
CGAGCGAGGCTGGCTTGGGATCCCGGCTTATATGGTTCCATGCTCTCATCTACGGCCAGCCGCCCGATTTCATAGGTCAG
CAGGACTGGTACTGGCGTCCTCTCGACCTGCCTTGCTTTGATTATGAGGGTGCTAATTACAAGTCGGATCTGCCTCACTC
TGATTACGACTCGGATGCTGATGAGGACTGGAATGCTGATTACACGGATTCTGCAGATGATACAAACACCAATGAGTCAC
CACACCCCTGTGCGATCTGTGCCTACACGGTGGTTGGTAATTCACAGATCTGGGTATCCACACTGGGCGCTGGCACGTAC
TCCTTTGACATCGTGAGTGGCACGTGGAGCAAGGTCGGCATGTGGGTGCTGCCGTTCAGAGGCCGTGCTGTTTACGTCCC
CGAGCACAACCTCTGGTTTGGCTTCTCAGATAAAGACGATCAGCTCTGTGCGGTTGACCTTGCTCTGACGCAGCCGGTGC
TCCAGAAGGTGTTAGAAGACCCACCTCTGCCCGAGGCGTGTTCCCGGATGGCTTCCCATCTTCTTCATTTGGGCTCTGG-
-------CAAGTTGTGCGTGCAAAGGCTGTTCCAGAAGACACAGCAGGGGAGCCTTCTTCAGTCAGTTCCCAGTGATGAG
AAAGATGAAGGTTTTGCCGTGCTCGCTGGTGTGGAAGTTCGGCGCGATGATGGCATTGGAGACCTTCAGATGATCAAGCA
CAAGTCCATGCATTATGGTTTTGATGAAAATGGCGTCAAGCTGCTGTGATATTGCAAGCGAGTTTAGAGCAAGGACTTCT
TTTGAAAAAACT-TTAGGCCAGTTTTTGTTTGTATATTCTGCTATCTGTGGAAATTTAAATTGGCTGATTTGTTGAATTA
CTGTGGGACTAGAATCGGACTAGAATCAAGTTATGTCTGTTGTACGTTAGAGATTTCCTGCAATCCTCTTATGCAGAGTC
TTAAGTAACTAGAAGGATAT-----ATGTGCGCTTTGCTGCGCCGGTAAAGAGTAATGAAGAGACAAACATGTCTTATTG
ATGCAAGTTATCTTCATTTCTTAGATGAGTGGCAAAGTACAAGTTTTC--ATTCCATTCAAATCTAGTTTCGGATACATC
AAAATATGAAGC-AAAAAATGTGCATTGTTAATTCCCAAAGACACTGAACATTTTACAACATTGAGTATCATCAAGAGAG
CTCTTAACATTCATGCATCTTCACTCGTGTGACTTTTT--TTCTGCAAAGCTTAATCACAAACAATAAAGTTAATCAATA
GTGGGCAACATGCAATATCTTTGCAATCTTGACAGATAGTGATAAAAGGTTGTTCAATATTCTCTGGCTTTTCGAGAGTA
TAGTATAGCTCTAGGCATAAAGTTCGCTTCCTGTCACACAAGCATACAGAAGGAAAATTTAATTAATTTTATTTTTTAAT
ATCCTATAGTTAAGCATATCAAGCTAATTGCAGGACACAATTTGTAAGGAAGAGA-------------------------
-----------------------------TCCTGCCAAAAGTGTATCTTGACCAATCATATAACACATGATAACTCATGT
AAGCATACAATTCAATTCTAACTGGATACGTAGATTGAAATTCAATTCATTAATTGTGGCAATTTTGAACAATATAATAA
AACTGATTGGAG-------ATGCTTACTCTACTATTGGACTTGGGGACTTCTATTGATGCGGTGCTGTTTAAGGCCAGCT
AACAAATAGAGACATAGATTCTGAAAAATGAACATTACAGAGTAAAATTGTAGACATTAGCACCAAAGCATGTTAGGCTT
A
>chr2A_1
TCTCACTGTTTAATGTATACACGCCGCGCGAATTTCTAAGAACTAAGAGCAGCGGAAGAAAAAAAA--TCAAAA-GTTTT
GACCATTAAACATTTTTTTGATATATGCTGAACAATTCTTAAAAACACACTGAACATTTTTTTGATATACACTGAACATT
TTGTAAGTACACAATGAACATTGTTATAAA-TACGT----------------------TGAACATTTT------------
----------GTTAAATGTGTGATTA---TT-TTTTTGTAACACACAATGAACA-TTTTTATAAACGCAAGGTGAAT-TT
TTTTGCAATATATGTTGAACATTTCCTTAATATACGATGAACATTTTT-TGTCATACACAGCGAACTTTTTATATAATAC
CAAAAAATGAGAAG---------AAAAAGGAAAATAAGAAAATAAATGAAAAGGTAAAAGGGAAC---------------
-AAAAAAACCATAACAAAACCACTGAAAACCGGACAAAACAGTGAAAAGA-CCGGAAGC-AAAAACAGCACAGAAGAAAA
ACGAA-AAA-A-AA---AACACGAAACAGCGAGGGAAAGCAGCAGGGAAGGGATAAACAGGCGAATCCCGCACGTGGGCC
GGCCCAACCAGACGCTAG-CCTCAGCGAAGGCAGGACGTTTGGACGCTAACGAGCGTCATATAGGATCCACCTCCCTCTT
GCGCCGCCTCTATATCAGAACCTCACGCACCTTC-----CTCCTTCATCCCCTTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTGGCCGACTCCAACATCCCGGTTTGTCCGCTGCCTGCTGAAGGATCCCTGCCTGCTC
CCTCCCTTGGCCAGGTATGACCCTGATTTCCGATCCTATTTCTCTACATATGTGGATTCTTCACTCGATCTCACTTGGAG
AAGACGCCGATATCAACAATTAACTAGTCCATGCTCTTCTTTT-TTATTTGTCAGTTCATTCAAATAGAAGAAAGGAAAA
ATAAGCCAGATTTCTGTCTATTAGATC-----------------------------------------------------
-------------------------------------------------------GAGGCAGAGAGAGATTTGAAGCGGA
ACCATGAATCGCCGTTTCGTCAATCTGCTGGTCAATAGGTTGTGCGCCCCTCGACCCGCTTACAGGCTGCACTGCATCGA
CCCCGCAACCTTGTTTTACCCTACCGGATCGCCACAGCCAGCAGATCCAGCTGCCATAAACGACAGC------------G
CTCCAGCTCCTGGGAGGTTGCCTGCGCCCACCATATCCTTCGACTGGCCCTGCAAGCCGCACCAATCCGGCTGGATGGAT
TTCATGGCCTTCAAGAACAACATCATTGCCGTCGACCACGAGGGCCGCACGCTCCTCTACGACACCGCCTCCAGGGCAGT
CCGGGCCATG----------------------------------------------------------------------
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>chr2A_2
-CTCCCTGTTTAATGTATACACGCCACGCGAATTTCTAAGAACTAAGAGCAGCGGAAGAAAAAAA---TCAAAA-CTTTT
GACCATTAAACATTTTTTTGATATATGCTGAACAATTCTTAAAAACATACTGAACATTTTTGTGATATACACTGAACATT
TTGTAAGTACACAATGAACATTGTTATAAA-TACGT----------------------TGAACATTTT------------
----------GTTAAATGTGTGATTA---TT-TTTTTGTAATACACAATGAACA-TTTTTATAAACGCAAGGTGAAC-TT
TTTTGCAATATA-GTTGAACATTTTCTTAATATACGGTGAACATTTTT-TGTAATACACAGTGAACTTTTTATATAATAC
CAAAAAATGAGAAG---------AAAAAGGAAAATAAGAAAATAAATGAAAAGGTAAAAGGGAAC---------------
-AAAAAAGCCATAACAAAACCACTGAAAACCGGACAGAACAGTGAAAAGA-CCGGAAGC-AAAAACAGCACAGAAGAAAA
ACG---AAA-A-AA---AACACGAAACAGCGAGGGAAAGCAGCAGGGAAGGGATAAACAGGCGAATCCCGCACGTGGGCC
GGCCCAACCAGACGCTAG-CCTCAGCGAAGGCACGACGTTTGGACGCTAACGAGCGTCATATAGGATCCACC--------
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>chr4D_2
-CTCACTGTTTGCTGTGTATACGCCGCGCGAATTTATAAGAACTAAGAGCAGCGGAAGAAAAAAAA--TCAAAT-GTTTT
GATCATTAAACATTTTCGTGATATATGCTCAACAATTCTTAAAAACACATTGAACATTTTTGTGATATATGCTGAACATT
TTGTAAGTACACAATGAACATTGTTATAAA-TACGT----------------------TGAACATTTTCCTAGTATATGG
TGAACATTTTGTTAAATGTGTGATTAAT-TT-TTTTTGTAATACACAATGAACA-TTTTTATAAACGCAAGGTGAAC-TT
TTTTGCAATATATGTTGAACATTTCCTTAATATACGATGAACATTTTTTTGTAATACACAGTGAACTTTTTATATAATAC
CAAAAAATGAGAAG---------AAAAAAGAAAATAAGAAAATAAATGAAAAGGTAAAAGGGAAC---------------
-AAAAAAAACATAAGAAAT-CACTGAAAACCGGACAAAACAGTG-AAAAA-CCGGAAGC-AAAAACAGCACAGAAGAAAA
ACG---AAATA-AA---AACACGAAACAGCGAGGGAAAGCAGCAGGGAACGGATAAACAGGTGAATCCCGCACGTGGGCC
GGCCCAACCAGACGCTAG-CCTCAGCGAAGGCACGACGTTTGGACGCTAACGAGCGTCATATAGGATCCACC--------
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>chr5B_2
-CTCACTGTTATCTCTATGTACGCCGCGTGAGTTTATAAGAACTAAAAGCAGCGGAAGAAAAAAAAA-TCCAAA-CTTTT
GACCATTAAACATTTTTATGATATATGCTGAACAATTCTTAAAAACACATTGAACATTTTTGTGATATACACTGAACATT
TTATAAGTACACAATGAACATTGTTATAAA-TACGT----------------------TGAACATTTTCCTAGTATATGG
TGAACATTTTGTTAAATGTGTGATTAATATT-TTTGT--AATACATGATGAACA-TTTTTATAAATGCAAGGTGAAC-TT
TTTTGCAATATACGTCGAACATTTCCTTAATATACGATGAACATTTTTTTGTAATAAACAGTGAACTTTTTATATAATAC
CAAAAAATGAGAAT---------AACAAAGAAAATAAGAAAATAAACGAAAAGGTAAAAAGGAAC---------------
-AAAAAAA-CATAACAAAACCACTGAAAACTGGACAAAACAGTGAAAAAA-CCGGAAGC-AAAAACAGCACAGAAGAAAA
ACG---AAA-A-AA---CACACGAAACAGCGAGGGAAAGCAGCAGGGAACGGATAAACAGGCGAATCCCGCACATGGGCC
GGCCCAACCATACGCTAG-CCTCAGCGAAGGCACGACGTTTGGACGCTAACGAGCGTCATATAGGATCCACC--------
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>chr5D_2
-CTCACTGTTAGCTGTATATAAGCCGCGCGAGTTTATAAGAACTAAAAGCAGCGGAAGAAAAAAAAA-TCCAAA-CTTTT
GACCATTAAACATTTTTGTGATATATGCTGAACAATTCTTAAAAACACATTGAACATTTTTGTGATATACACTGAACATT
TTGTAAGTACACAATGAACATTGTTATAAA-TACGT----------------------TGAACATTTTCCTAGTATATGG
TGAACATTTTGTTAAATGTGTGATTAATATT-TTTGT--AATACATGATGAACA-TTTTTATAAATGCAAGGCGAAC-TT
TTTTGCAATATACGTTGAACATTTCCTTAATATACGATGAACATTTTTTTGTAATAAACAGTGAACTTTTTATATAATAA
CAAAAAATGAGAAT---------AACAAAGAAAATAAGAAAATAAACGAAAAGGTAAAAAGGAAT---------------
-AAAAAAT-CATAACAAAACCACTGAAAACCGGACAAAACAGTGAAAA-A-CCGGAAAC-AAAAACAGCACAGAAGAAAA
ACA---GAA-A-AAA--AACAAGAAACAGCGAGGGAAAGCACCAGAGAACGG-TAAACAGGCGAATCCTGCACGTGGGCC
GGCCCAACCATACGCTAG-CCTCAGCGAAGGCACGACGTTTGGACGCTAACGAGCGTCATATAGGATCCACC--------
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>chr3D_2
-CTCACTGTTAGCTGTATATACGCCGCGCG-ATCTATAAGAACTAAAAGCAGCGGAAGAAAAAAAAAATCCAAA-CTTTT
GACCATTAAACATTTTTGTGATATATGCTGAACAATTCTTAAAAACACATTGAACATTTTTGTGATATACACTGAACATT
TTCTAAGTACACAATGAACATTGTTATAAA-TACGT----------------------TGAACATTTTCCTAGTATATGG
TGAACATTTTGTTAAATGTGTGATTAATATT-TTTGT--AATACATGATGAACA-TTTTTATAAATGCAAGGTCAAA-TT
TTTTGCAATATACGTTGAACATTTCCTTAATATACGATGAACATTTTTTTGTAATAAACAGTGAACTTTTTATATAATAC
CAAAAAATGAGAAT---------AACAAAGAAAATAAGAAAATAAACGAAAAGGTAAAAAGGAAC---------------
-AAAA--ACCATAACAAAACCACTGAAAACCGGACAAAACAGTGAAAACA-CCGTAAGC-AAAAACAGCACAGAAGAAAA
ACG---AAA-ACAAA--AACACTAAAGAGCGAGGGAAAGCAGCAGGGAACGGATAAACAGGCGAATCCTGCACGTGGGCC
GGCCCAACCATACGCTTCACCTCAGTGAAGGCACGACGTTCGGACGCTAACGAGCGTCATATAGGATCCACCT-------
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>chr1B_2
-CTCACTGCTTGCTGTATATATGCCGCGCGAATTTATAAGAACTAAGAGCAGCGGAAGAAAAAAAA--TCAAAA-GTTTT
GACCATTAAACATTTTTGTGATATATGCTGAACAATTCTTCAGAACACATTGAACATTTTTGTGATATACACTGAACATT
TTGTAAGTACACAATGAACATTGTTATAAA-TACGT----------------------TGAACATTTTCCTAGTATATAG
TGAACATTTTGTTAAATGTGTGATTAAT-TT-TTTTT--AATACACAATGAACA-TTTTTATAAACGCAAGGTGAAC-TT
TTTTGCAATATACGTTGAACATTTCCTTAATATACGATGAACATTTTTT-GTAATACACAGTGAACTTTTTATATAATAC
CAAAAAATGAGAAG---------AAAAAAGAAAATAAGAAAATAAATGAAAATGTAAAAGGGAAC---------------
-AAAAAAA-CATAACAAAACCACTGAAAACCAGACAAAACAGTGAAAAAA-CCGGAAGC-AAAAAAAGCACAAAAGAAAA
ACG---AAA-A-AA---CACG---------------AAGCAGCAGGGAATGGATAAACAGGCCAATCCCGCACGTGGGCC
GGCCCAACCAGACGCTAG-CCTCAGCGAAGGCACGACGTTTGGACGCTAACGAGCGTCATAGGAT-----CCACCCTCTT
GCG-----------------------------------------------------------------------------
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>chr6B_2
-CTCAATGTTTATTGTATAGAGGCCGCGTGAGCATATAAGAACTAAACGCAGTGGAAGAAAAAAAT--TGAAAA-CTTTC
GACCATTAAACATTTTTGTGATATATGCTGAACAATTCTTAAATACACACTGAACATT-TTGTTATATACACTGAACATT
TTGTAAGTACACAATGAACACTGTTATAAG-TACGT----------------------TGAACATT--------------
--------TTGTTAAATGTGTGATTAATATT-TTTGT--AATACACGATGAATATTTTTTATCAATGCTTGGTGAACTTT
TTT-CTAATATACGGTGAAAATTTTCTTAATATACGATGAATAGTTTTT--TAATACACAGTGAACATTTTATATAACAC
CAAAAAATGAGAAGAAGA------------AAAATAA--------ACGAAAAGGAAAAAAACGAAATGTAAAAGGAACAA
AAAAATAACC---------CCACTGAAAACCGAACAAAACATTGAA-AAA-CCAGAAGC-AAAAACAGCACAGAAGAAAA
ACG---AAA-A-AAAGAAACACGAAACAGAGAAGGAAAGCAGCAGCGAACAAATAAACAGCA-AATTCTGCACGTGGCCC
GGCCCAACCAGACGTTCT-CCTCAGCGAAGGTACGACGTTTGGATGCTGACGAGCGTCATATAGGAT-------------
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>chr1A_14
-------------TGTATATAAGCTGCGCGAGTGTATAAGAACTAGAAGCAGTGGAAGAAAAAAAA--TCAAAAACTTTT
AACCATTAAACATTTTTGTGATATATGCTGAACAATTCTTAAATACACACTGAACATTTTTGTGATATACACTGAACATT
T-GTAAGTACACAATAAACATTTTTATAAAATACGCTGAACATTTTCGTAGTATATGGTGAACATT--------------
--------TTGTTAAATGTTTGATTAATATT-TTTGT--AATACAGGATGAACA-TTTTTATAAATGCAAGGTGAAC-TT
TTT-GTAATATACTTTGAACATTTCCTTAATATATGATGAACATTT-TT-GTGATACACAGTGAACTTTTTATATAACAC
CAAAAAATAAGAAGAAGAAACCAAAAAAAGAAAATAA--------ACGAAAAGGTAAAAAGGAAAGGTAAAAAGGAACAA
AAAAA--CCCATAACAAAACCACTGAAAACCGGA----------------------AGC-AAAAAAAGCACAGAAGAAAA
AAACGAAAA-C-AAA--AACATGAAACAACGAGGGAAAGCAGCAGGGGACGAATAAACAGGCGAATCCCGCACATGGGCC
GGCCCAATCAGGCGCTAG-CCTCAGCGAAAGCACGACGTTTGGACGCTAACGAGCGTCATATAGGATCCACCGTCCC---
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>chr4A_21
--------------------ACGCTGCACGAATTTATAAGAACTAAGAGCAGCGGAAGAAAAAAAA--TCAAAA-GTTTT
GATCATTAAACATTTTTGTGATATATGCTGAACAATTCTTAAAAACACATTGAACATTTTTTTGATATACACTGAACATT
TTGTAAGTACACAATGAACATTGTTATAAA-TACATTGAACATTTTCC-AGTATATGGTGAACATT--------------
--------TTGTCAAATGTGTGATTAATGTTTTTTTT--AATACACAATGAACA-TTTTTATAAATGCAAGGTGAACATT
TTT-GCAATATACGTTGAACATTTCCTTAATATACTATGAACATTTTTT-GTAATACACAGTGAACTTTTTATATAATAC
CAAAAAATGAGAAG---------AAAAAAGAAAATAA--------ATGAAAAGGTAAAAGGGAAC--------------A
AAAAA--ACCATAACAAAACCACTGAAAACCGGACAAAATAGTGAAAA-AACCGGAAGCAAAAAACAGCACAGAAGAAAA
ACG---AAA-A-AAA--AACACGAAACAGCGAGGGAAAGCAGCAGGGAACGGATAAACAGGCGAATCCCGCACGTGGGCC
GGCCCAACCAGACGCTAG-ACTCAGCGAAGGCACGACGTTTGGACGCTAACGAGCGTCATATAGGATCCACC--------
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>chr2D_640
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--------TCTATATCAGAACCTCACGCACCTTCTTCCCCTCCTTCATCCCCTTCTCCCTCTCCCAAACTCCAGTACATT
-------------TCTCTCTCTCTCGCCGACTCCGACATCCCGGTTTGTCCGCTGCCTGCTGAAGGATCCCTGCCTGCTC
CCTCCCTTGGCCAGTTATGACCCTGATTTCCGATTCTATTTCTCTACATATGTGGATTCTTCATTCGATCTCACCTGGAG
AAGACGCCGATATCAACAATTAACTAGTCCATGCTCTTCTTTTATTATTTTTCAGTTCATTCAAATAGAAGAAAGGAAAA
AGAAGCCAGATTTCTGTCTATTACTTCCTCAATTTCGAATTACTTGTCGCATGTATGGATGTATTTAGATGTATTGTAGT
TCTAGGTACATCCATTTCTGCGAGAGTAATTTGAAACGGAGGGAGTAGATCGGGGGAGGCAGAGAGAGATTTGAAGCGGA
ACCATGAATCGCCGTTTCGTCAATCTGCTGGTCAATAGGTTGTGCGCCCCTCGACCCGCTTACAGGCTGCACTGCATCGA
CCCCGCAACCTTGTTTTACCCTACCGGATCGCCACAGCCAGCAGATCCAGCTGCCATAAACCACAGCGCTCCAGCTCCAG
CTCCAGCTCCTGGGAGGTTGCCTGCGCCCACCATATCCTTCGACTGGCCCTGCAAGCCGCACCAATC-------------
------------------AACATCATTGCCGTCGACCACGAGGGCCGCACGCTCCTCTACGACACCGCCTCCAGGGCTGT
CCGGGCCTTGAACCCGATGCAACCCCCTCTGCGGTCATACAACATATTCGTCACAGTAGGCGACAGCCTGTATGTCATGG
CGACCGAGGCTGGCTTGCGATCCCGGCTTATATGGTTCCATGCTCTCATCTACGGCCAGCCGCCGGATTTCATAGGTCAG
CAGGACTGGTACTGGCGTCCTCTCGACCTGCCTTGCTTTGATTATGAGGGTGGTCATTACAAGTCGGATCTGCCTCACTC
TGAGTACGACTCGGATGCTGATGACGACTGGAATGCTGATTACACGGATTCTGCAGATGTTACAAACACCAATGAGTCGC
CACACCCCTGTGCGATCTGTGCCTACACGGTGGTTGGTAATTCACAGATCTGGGTATCCACACTGGGCGCTGGCACGTAC
TCCTTTGACATCATGAGTGGCACGTGGAGCAAGGTCGGCACGTGGGTGCTGCCGTTCAGAGGCCGTGCTGTTTACGTCCC
CGAGCACAACCTCTGGTTTGGCTTCTCAGATAAAGACGATCAGCTCTGTGCGGTTGACCTTGCTCTGACGCAGCCGGTGC
TGCAGAAGGTGTTAGAAGACCCACCTCTGCCCGAGGCGTGTTCCCCGATGGCTTCCCATCTTCTTCATTTGGGTTCTGGG
CTTCTGGCAAGTTGTGCGTGCAAAGGCTGTTCCAGAAGACACAGCAGGGGAGCCTTCTTCAGTCAGTTCCCAGTGATGAG
AAAGATGAAGGTTTTGCCGTGCTTGCTGGTGTGGAAGTTCGGCGCGATGATGGCATTGGAGACCTTCAGATGATGAAGCA
CAAGTCCATGCGTTATGGTTTTGATGAAAATGGCGTCAAGCTGCTGTGATATTGCAAGCGGGTTTAAAGCAAGGACTTCT
TTTAAAAAATCTTTTAGGCCAGTTTTTGTTTGTATATTCTGCTATCTGTGGAAATTTAACTTGGCTGATTTGTTGAATTA
CTGTGGGACTAGAATCGGACTAGAATCAAGTTATGTCTGTTGTACGTTAGAGATTTCCTGCAATCCTCTTATGCAGAGTC
TTAAGTAACTAGAAGGATATATGATATGCGCGCTTTGCTGCGCCCGTAAAGACTAATGAATAGACAAACATGTCTTATTG
ATGCAAGTTATCTTCATTTCTTAGATGAGTAGCAAAGTACATAATTTTTTATTCCATTCAAATCTATTTACGGATACATC
AAAATATGAAGCAAAAAAATGTGCATTGTTAATTACCAAAGACACTGAACATTTTACAACATTGAGTATCATCAAGGCAG
CTCTCAACATTCATGCATCTTCACTCGTGTGACTTTTTTTTTCTGCAAAGCTTACTCACAAACAATGAAGTTAATCAGTA
GTGGGCAACATGCAATATCTTTGCAATCTTGACAGATAGTGATAAAAGGTTGTTCAAGATTCTCTGGCTTTTCGAGAGTA
TAGTATAGCTCTAGGCATAAAGTTCGCTTCCTGTCACACAAACATACAAAAGGAAAATTTAATCCCAAC-----------
-------------------------AATTGCAGGACACAATTTGTAAGGAAGAGAAGAAATTGTTAGTACATAATGTGAG
AACAATTTGGTGAGGAACAATGAAGGAGATCCTGCCAAAAGTGTATCTTGACCAATCATATAACACATGATAACTCATGT
AAGCATGAAATTCAATTCTAACTGGATACATAGATTCAAATTCAATTCATTAATTGTGGCAATTTTGAACAATATAATAA
AACTGATTGACCAAGGGAAATGCTTACTGTACTATTGGACTTGGGGACTTCTATTGATGCAGCGCTGTTTAAGGCCAGCT
AATAAATAGA--CATAGATCCTGAAAAATG--------------------------------------------------
-
>SNPs
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---S-------------S----------------------------------------------S---------------
----------------------------------------------------S-S-------------------------
---S--------------------S----------------------------------S------------------S-
--------------------------------------------------------------------------------
------------S---------------------------S---------------------------------------
--------------------------------------------------------------------------------
-S-------------------------------------------S---------------------------S------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------S-----
-----------S------------------------------------------------S-----S-------------
---S-----S-------------------------------------------------S--------------------
--------------------------------------------------------------------------------
----------------------------S---------------S-------S-------S-------------------
------------------------------S----------SSS---S------------------S--S----------
----------------------------------S-----------------------------------------SS--
----S-------------------------------------------------S-----------S----------S--
---------------------------------------------------------S----------------------
-----------------------------------------S------S--------------SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------------------
--------------------------------------------------------------------------------
------SS---------------------S------S-------------------------------------------
---------SSS----------------S-------------------------------S-S-----------------
--S-------SS-------S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S
>forward_1604
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----------------------------------------------------------------AGCCTGTATGTCATGG
CGAG----------------------------------------------------------------------------
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>reverse_3419
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----------------------------------------------------------AGCACCAAAGCATGTTAGGC--
-
