>input_sequence_59328
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----ATGATCCACCACCTCCGAACGCGCGTCCTTCCTCTCCTCCTCCGCTACCCACCATCCCATCTCCCCGCCTCCCACC
TCGTTCCCCTCCACTGCCTCCTCTCCACCACCGCATCCATCTCCCCCAAACCTTTCTCCGCCAAGGACTTCCTCGTCGCC
GACTGCGGCCTCACCCGAGCACAAGCCCTCAAGGCCTCCAGAAGGCTCTCCAACCTCACCTCCCTCTCCAAGCCCGAGGC
CACGGTGGCCTTTCTCTTGGGCCGCGGCGTCCCCCGCTCCGACATCGCCGCCGCCGTGGTCGCCGACCCGTCCCTCCTGT
ACGCCAGCGTGGGGATGGTCCTCGCCCCCCGCTTCGCCGAGCTTAGCGAACTCGGCTTCTCGCCTTCGCAGATCGTGGCC
ATCCTCTCGATCCGCCGCACGGGCGCTCTCCGCGGCAACCTCCTGTTCTGGGTCCGGATCTTCGACTCCTACCCCAAGCT
GCTCTTTCTCGCAAAGTCAAACCGCGAGCTCCTCAGTGCCAGCCTCGAGAAGGTGATCAAGCCGAGCCTGACCATCCTCC
AAGAATGTGGGATAAGTGCTCGTGATATTGCAGGTTTAAGCTTGTACTCCTGTCGGTTGTTCACCGTGAAACCCAAGTTT
CTCGTGGACGCCGTGGCGCGGGTCGAGGAGTTAGGCGTGCAGCGATGCTCATGGATGTTCCGCCGTGCACTCGCTGCACT
CGCCTTCAAGAGCAAGGACGTTCTCGCCAGGAAAATACAATTTTTACATGCGCTGTGGTTTTCACAGGATGATTTGGTGA
AGATCGCCAAGAAGGCGGCACTTGTCCTGGCTTTATCTGATAAAAAGATCCAGCGATCTGTGGGGTTCTTAATGAAGGAT
GTCGGTCTGCAGGCTTCGTACATTGCTCGAAGGCCAGCGCTGATCATGTATAGCGTTGAGAGGCGATTGTTGCCCCGGTA
CTCCCTGCTTAAGCTTCTCAGGCAGAAGGGATTACTGGACGTGGAATTGGACTATTATAGCATGGCATCGCTGGCTGAGA
AGAACTTTGTGCAGAATTTTGTGGATCCTTATAAGGATAGTGTTCCAGGCCTAGTTGATGAGTATGCCTCTGCATGTCGT
GGGAAAGCACCAAAAGGAAGTGCTTGGCTATAA-----------------------------------------------
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>chr7D_1_TraesCS7D01G184200
CCCGCCGCCACCAGCCGCCATGGCGAGGCCGGGCAGGGGTCCAGCAGGGACGCCCGCGTCAAGGAGGAGAAGGCCGACGA
TGACGACGGCGGTGAGGATGGCGGCGACGACGGCGACTACTCGGCGTTCAGCCAGTTTCTTTTTTAGATTGTATATATAT
TTGCTATGTAATGAAAATCCACGAACATGTCTAATATATGGCCAAGTTTGCCGAAATTTAGTCGTGTTTAGCCGAACTGC
GCCGAACTTTGCCGGAATTTGCTATATATTTTTCTTTTTTGAACGCGCCTGGGGGCGGCCCTGGGGCCGGCGGCTGGGGA
CCAACTCGCCCCCAGGCCGATATTTTGCGCCGGCTCACCCCTAGGCCGATTTTTTGCGCCGGCTCACCCCAGGCGGCGAT
TTTAGGCGCCCCCCTGGGGGCCAACGGCTGGAGATGCTCTTAGGACATGCAGCCCAGAGATCAGGCCTGTATACATAGAT
CCAGTATAGATGGGAGAATATCAGGTGCTCCCATCTCTTTGGTGCTCCCATGCTACCAGTTTTCAAAATGCACATTTATA
CGTTTCAAAA----AATTCTG-AAAACAATTGTGGATGTGCACATCACATGAGTGTACA------ATTCCTAAAAGTTTC
AAATCAAAATTCGAAATACACTAGTTGTATGTACAATCCCCAAAAATTTCAAATCAAAAATCAAAATGTGATGTCAACAT
CCACAAATGTTTTCGGAGTTTCTGAACACTCGTTACATGTTTTTAGGGGAATTTTTTTGAAGGTTTTTTAGGGGAATTTT
GAAACACTTACATGTGATTTTTGAAAATTTGGAGCATGCCAGAGCACTGGATAAGTGGATATCTACCCCAGTACAGATAT
GGGCCGGCCTTTGATCCATAGCATGTGTACAATTGTACCCTTCCCTCAAAAAAAAAAATTTTGTACCCACGTTCCGCTGC
CCTGCCGCCGCGTACGTTTC---------------------------------CGCTGACCGCCGCCGGCGCCGCCGCCA
CGCCATGATCCACCACCTCCGAACGCGCGTCCTTCCTCTCCTCCTCCGCTACCCACCATCCCATCTCCCCGCCTCCCACC
TCGTTCCCCTCCACTGCCTCCTCTCCACCACCGCATCCATCTCCCCCAAACCTTTCTCCGCCAAGGACTTCCTCGTCGCC
GACTGCGGCCTCACCCGAGCACAAGCCCTCAAGGCCTCCAGAAGGCTCTCCAACCTCACCTCCCTCTCCAAGCCCGAGGC
CACGGTGGCCTTTCTCTTGGGCCGCGGCGTCCCCCGCTCCGACATCGCCGCCGCCGTGGTCGCCGACCCGTCCCTCCTGT
ACGCCAGCGTGGGGATGGTCCTCGCCCCCCGCTTCGCCGAGCTTAGCGAACTCGGCTTCTCGCCTTCGCAGATCGTGGCC
ATCCTCTCGATCCGCCGCACGGGCGCTCTCCGCGGCAACCTCCTGTTCTGGGTCCGGATCTTCGACTCCTACCCCAAGCT
GCTCTTTCTCGCAAAGTCAAACCGCGAGCTCCTCAGTGCCAGCCTCGAGAAGGTGATCAAGCCGAGCCTGACCATCCTCC
AAGAATGTGGGATAAGTGCTCGTGATATTGCAGGTTTAAGCTTGTACTCCTGTCGGTTGTTCACCGTGAAACCCAAGTTT
CTCGTGGACGCCGTGGCGCGGGTCGAGGAGTTAGGCGTGCAGCGATGCTCATGGATGTTCCGCCGTGCACTCGCTGCACT
CGCCTTCAAGAGCAAGGACGTTCTCGCCAGGAAAATACAATTTTTACATGCGCTGTGGTTTTCACAGGATGATTTGGTGA
AGATCGCCAAGAAGGCGGCACTTGTCCTGGCTTTATCTGATAAAAAGATCCAGCGATCTGTGGGGTTCTTAATGAAGGAT
GTCGGTCTGCAGGCTTCGTACATTGCTCGAAGGCCAGCGCTGATCATGTATAGCGTTGAGAGGCGATTGTTGCCCCGGTA
CTCCCTGCTTAAGCTTCTCAGGCAGAAGGGATTACTGGACGTGGAATTGGACTATTATAGCATGGCATCGCTGGCTGAGA
AGAACTTTGTGCAGAATTTTGTGGATCCTTATAAGGATAGTGTTCCAGGCCTAGTTGATGAGTATGCCTCTGCATGTCGT
GGGAAAGCACCAAAAGGAAGTGCTTGGCTATAACACTGAAACTGTGGTGTGCGAGAATCCGTTCATTTTGAGATTATCCG
AGGAGTTTTGTCACCCCAAGACTGATTTTTTGATCGGTGAGATCGGTTCGGAGTCAGAGTGCACTGTGAATTGATAAAAA
GTCTGTACAGTCCATGTACTGCATGAAGAAGTGTCTGGTTCCCGGTATCATGAAAGGTCCTGCCAATAGATGGATTGTTG
CAACTTCAG---TTTTACTCATTAATTGCTCGTTCTGAGGAGACTAAGAAATCAAAGTTCATTGATTTTCAGAAGGACAG
TGTCTCTGAGCTCGCTGATATGTATGAAGCAGCTTGTGCCGGGGAGGTTGCCTCCCAAGTCCAACTTTGGCATTTTAAGA
TATTGAAGACTTGTTGTATCCTTCAGTGTAGTACATGTTCAGATGGTAACAATGCAGATCCTACCCATTAGTTACT---G
TCCATTGTGCAAACACTCTTAGTTCTTAGTCTCAGCAATTTAACAACTAGTTATCTGATTGCTACAAAA-CAATTCA---
TGTTTTTTTTAGGAATCAATTACAATCCATGTTCAAATTTTGGATATGTGGTACGAAGGAACTAGATTGTCTTATTGCCT
TATTGCTCATGCCTGCTCGCCAGTACTTATCCCTGCCACACGACTCAAGGTTATGCTTTAGTTGGAAT-TTCTTTTACAG
ATTGGTCACCGGAGTATTGAAAGATTAGCTGCCTCTTTTCTCTCACGTATCTGCTCATAGTGTTTTTGTTTGGACTGAAG
TTTACATCACCAACTAGTCACTGCTGCTTCTTTGAGGTGTTGTCATTTGTTTTCAGCTAATGGATCACTCCAATTCCAAC
TGTTGCTTTATCTGTCCATTACACCATTAAGGCTTGACTAATGGGCTTTTAGATAGTGGCAAGAGTCACTACAGAGAAGG
TTTT-CTTATGAAGCACTTTTAGAATAACATTGGTGTTCTAAGGAGCAACAAAATTTTCCTGGCTGTTTACAAACTGATT
TGGTG
>chr7A_438
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-------------------------------------TCTTAGGACATGCAGCCCAGAGATCAGGCCTGTATAGATAGAT
CCAGTATAGATGGGAGAATATCAGGTGCTCCCATCTCTTTGGTGCTCCCATGCTACCAGTTTTCAAAATGCACATTTATA
GATTTCAAAA----GATTCCATAAAACAATTGTGGATGTTCACATCACATGAGTGTACATGTACAATTCCTAAAAGTTTC
AAATCAAAATTTGAAATACACTAGTTGTATGTACAATCCCCAAAAAATTCAAATCAAAATTCGAAATGTGATGTCAACAT
CCACAAATGTTTTCGGAGTTTTTGAACACTTATTACATGTTTTAAGGGGAATTTTTTGAAGGATTTTTTAGGGGAATTTT
GAAACACTT-CATGTGATTTTTGAAAATTTGGAGCATGACAGAGCACTGGATAAGTGGATATCTACCCCAGTACAGATAT
GGGCCGGCCTTTGATCCACCGCATGTGTACAATTGTACCCTTCCCTAAAAAAAA------TTGTACCCACGTTCCGCTGC
CCTGCCGCCGCGTACGTTTC---------------------------------CGCTGACCGCTGCCGGCGCCGCCGCCA
CGCCATGATCCACCACCTCCGAACGCGCGTCCTTTCTCTCCTCCTCCGCTACCCACCATCCCATCTCCCCGCCTCCCACC
TCGTTCCCCTCCACTGCCTCCTCTCCACCACCGCATCCATCTCCCCCAAACCTTTCTCCGCCAAGGACTTCCTCGTCGCC
GACTGCGGCCTCACCCGAGCACAAGCACTCAAGGCCTCCAGAAGGCTCTCCAACCTCACCTCCCTCTCCAAGCCCGAGGC
CACGGTGGCTTTTCTCTTGGGCCGCGGCGTCCCCCGCTCCGACATTGCCGCCGCCGTGGTCGCCGATCCGTCCCTCCTGT
ACGCCAGCGTGGGGGTGGTCCTCGCCCCCCGCTTCGCCGAGCTTACCGAACTCGGCTTCTCGCCTTCGCAGATCGTGGCC
ATCCTCTCGATCCGCCGCACGGGCGCTCTCCGCGGCAACCTCCTGTTCTGGTTCGGGATCTTCGACTCCTACCCCAAGCT
GCTCTTTCTCGCAAAGTCAAACCGCGAGCTCCTCAGCGCCAGCCTCGAGAAGGTGATCAAGCCGAACCTGACCACCCTCC
AAGAATGTGGGATAAGTGCTCGTGATATTGCAGGTTTAAGCTTGTACTCCTGTCGGCTGTTCACCGTGAAACCCAAGTTT
CTGGTGGACGCCGTGGCGCGGGTCGAGGAGTTAGGTGTGCAGCGAAGCTCATGGATGTTCCGTCGTGCACTCGCTGCACT
CGCCTTCATGCACAAGGACGTTCTTGCCAGGAAAATACAATTTTTACATTCGCTGGGGTTTTCACAGGATGATTTGGTGA
ATATCGCCAAGAAGGCGGCACTTGTCCTGGCTTTATCTGATAAAAAGATCCAGCGATCTGTGGAGTTCTTGATGAAGGAG
GTCGGTCTGCAGGCTTCGTACATTGCTCGAAGGCCAGCGCTGATCATGTATAGCGTTGAGAGGCGGTTGTTGCCCCGGTA
CTCCCTGCTTAAGCTTCTCAGGCAGAAGGGATTACTGGACGTGGAATTGGACTATTATAGCATGGCATCGCTGGCTGAGA
AGAAGTTTGTGCAGAATTTTGTGGATCCTTATAAGGATAGTGTTCCAGGCCTAGTTGATGAGTATGCCTCTGCATGTCAT
GGGAAAGCACCAAAAGGAAGTGCTCGGCTATAACACTGAAACTGTGGTGTGCGAGAATCCGTTCATTTTGAGATTATCCG
AGGAGTTTTTTGGCCACAAGACTGAGTTTTTGATCGGTGAGATCGGTTCGGAGTCAGAGTGCACTGTGAATTGATAAAAA
GTCTGTACAGTTCATGTACTGCATGAAGAAGTGTCTGGTTCCCGGTATCATGAAAGGTCCTGCCAACAGATAGATTGTTG
TGCAACTTTAGTTTTTACTCATTAATTGCTCGTTCTGTGGAGACTAAGAAATCAAAGTTCATTGATTTTCAGAAGGACAG
TGTCTCTGAGCTCGCTGATATGTAT-ACGCAGCTTGTGCTGGGGAGGTTGCCTCCTGAGTCCAACTTTGGCATTTTAAGA
TATTGAAGACTTGTTGTATCCTTCAGTGTAGTACATGTTCAGATGGTAACACTGCAGATCCTACCCATTAGTTACT---G
TCCATTGTGCAAACACTCTTAGTTCTTAGTCTCAGCAATTTAACAACTAGTTATCCGATTGCTACAAAAACAATTCGTGT
TTTTTTTTTGAGGAATCGATTACAGTCCATGTTCAAATTTTGGATATGTGGTACGAAGGAACTAGATTGTCTTATTGCCT
TATTGCTCATGCCTGCTAGCCAGTACTTATCCCTGCCACACGGCTCAAGGTTATGCTTTAGTTGGAATCTTCTTTTACAA
AATGGTCACCGGAGTATTGACAGATTAGCTGCCTCTTTTCTCTC----ATCTGCTCATACTGTTTTTGTTTCGACTGAAG
TTTACATCACTGGCTAGTCACTGCTGCTTCTTTGAGGCGTTGTCATTTGTTTTTAGCTAATGGATCACTCCCATTCCAAC
TGTTGTTTTATCTGTCCATTACACCATTAAGGCTTGACTAATGGGCTTGTAGATAGTGGCAAGAGTCACTACAGAGAAGG
GTTTTCTTATCAAGCACTTTTAGAATAATATTGGTGTTCTAAGGAGCAACCAAAATTTCCTGCCTGTTTATGAACTAATT
TGGTG
>chr7B_440
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---------------------------------------TTAGGACAGGCAGGCCAGAGACCAGGCCTGTATAGATAGAT
ATAGTACAGATGGGAGAATATCATGTGCTCCCATCCATTTGGTGCTCCCATGCTACCAGTTTTCAAAATGCACATTTATA
GTACGTATCAAAATAATTCCG-AAAACAATTGTGGATGTTCACATCACATGAGTGTACA------ATTCCTTAAAAATTC
AAATTAAAATTCGAAATACACAAGTTGTATGTACAATCCCCAAAAATTTCAAATCAAAATTCAAAATGTGATGTCAGCGT
CGACAAATATTTTCGGAATT--------------------------------------------------------TTTT
GAAACACTTACATGTGATTTTTGAAAATTTGGAGCA----------CTGGATAAGTGGATATCTACCCCAGTACAGATAT
GGGCCGGCC--------------------------------------------------TTTGTACCCACGTTCCGCCGC
CCTGCCGCTGCATACGTTTCCGCTTTCCCTCAAAGAAAAAAAACATACGTTTCCGCTGACCGCCGCCGGCGCCGCCGCCA
CGCCATGTTCCACCACCTCCGAACGCGCGTCCTTCCTCTCCTCCTCCGCTACCCACCATCCCATCCCCCCGCCTCCCACC
TCGTTCCCCTCCACCGCCTCCTCTCCACCACCGCATCCATCTCCCCCAAACCTTTCTCCGCCAAGGACTTCCTCGTCACC
GACTGCGGCCTCACCCGAGCGCAGGCCCTCAAGGCCTCCAGAAGGCTCTCCAACCTCACTTCCCTCTCGAAGCCCCAGGC
CACGGTGGCCTTTCTCTTGGGTCGCGGCGTCCCCCGCTCCGACATCGCCGTCGCCGTGGTCGCCGATCCGTCCCTCCTGT
ACGCCAGCGTGGGGATGGTCCTCGCCCCCCGCTTCGCCGAGCTTAGCGAACTCGGCTTCTCGCCTTCGCAGATCGTGGCC
ATCCTCTCGATCCGCCGCACGGGCGCTCTCCGCGGCAACCTCCTGTTCTGGTTCGGGATCTTCGACTCCTACCCCAAGCT
GCTCTTTCTGGCAAAGTCAAACCGCGAGCTCCTCAGCGCCAGCATCGAGAAGGTGATCAAGCCGAACCTGGCCACCCTCC
AAGAATGTGGGATAAGTGCTCCTGATATTGCAGTTTTAAGCTTGTACTCCTGTCGGTTGTTCACCGTGAAACCCAAGTTT
CTGGTGGACGCCGTGGCGCGGATCGAGGAGTTAGGCGTGCAGCGAAGCTCGTGGATGTTCCGCCGTGCACTCGCTGCACT
CGCCTTCAAGAGCAAGGACGTTCTCGCCAGGAAAATACAATTTTTACATACGCTTGGGTTTTCACAGGATGATTTGGTGA
ATATCGCCAAGAAGGCGGCACTTGTCCTGGCTTTATCTGATAAAAAGATTCAGCGATCTGTGGGGTTCTTAATGAAGGAT
GTCGGTCTGCAGGCTTCGTACATTGCTCGAAGGCCAGCGCTGATCATGTATAGCGTTGAGAGGTGGTTGTTGCCCCGGTA
CTCCCTGCTTAAGCTTCTCAGGCAGAAGGGATTACTGGACGTGGAATTGGACTATTATACCATGGCATCGCTGGCTGAGA
AGAAGTTTGTGCAGAATTTTGTGGATCCTTATAAGGATAGTGTTCCAGGCCTAGTTGATGAGTATGCCTCTGCATGTCGT
GGGAAAGCACCAAAAGGAAGTGCTCGGCTACAACGCTGAAACTGTGGTGTGCGAGAATACGTTCATTTTGAGATTATCCG
AGGAGTTTTGTCGCCACAAGACTGAGTTTTTGATCGGTGAGATCGGTTCAGAGTCAGAGTGGACTGTGAATTGATAAAAA
GTCCGTACAGTTCATGTACTGCATGAAGAAGTGTCTGGTTCCCGGTATCATGAAAGGTCCTGCCAACAGATGAATTGTTG
TACAACTTTAGTTTTTACTCATTAATTGCTCGTTCTGAGGAGACTAAGAAATCAAAGTTCATTGATTTTCAGAAGGACAG
TGTCTCTGAGCTCGCTGATATGTATGACGCAGCTTGTGCTGGGGAGGTTGCCTCCCGAGTCCAACTTTGGCATTTTAAGA
TATTGAAGACTTGTTGTATCCTTCAGTGTAGTACATGTTCAGATGGTAACACTGCAGATCCTACCCATTAGTTACTACCG
TCCATTGTGCAAACACTCTTAGTTCTTAGTCTCAGCAATTTAACAACTAGTTATCCGATTGCTACAAAAACAATTCA---
TTTTCTTTTGAGGAATCGATTACAATCCATGTTCAAATTTTGGATATGTGGTATGAAGGAACTAGATTGTCTTATTGCCT
TATTGCTCATGCCTGCTAGCCAGTACTTATCCCTGCCACATGGCTCAAGGTTATGCTTTAGTTGGAATGTTCTTTTATAG
ATTGGTCACCGGAGTATTGACAGATTAGCTGCCTCTTTTGTCTCATGTATCTGCTCATAGTGTTTTTGTTTCGACTGAAG
TTTACATCACTGACTAGTCACTGCTGCTTCTTTGAGGCGTTGTCATTTGCTTTTAGCTAATGGACCACTCCCATTCCAAC
TGTTGTTTTATCTGTCCATCACACCATTAAGGCTT-ACTAATGGGCTTTTAGATAGTGGCAAGAGTCACTAGAGAAGGT-
TTTT-CTTATCAAGCACTTCTAGAATAACATTGGTGTTCTAAGGAGCAACAAAAGTTTCCTGCCTGTTTACGAACTAATT
TGGTG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------S------
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SS-----------------S-------------------S----------------------------------------
-----------------------------------------------------------S--------------------
---------------------S--------SS-----------S-------------SS-S-S-----------------
--------------------------------------S-----------------------------------------
------------------SS--------------------------S-------SSSSS---------------------
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------------------------------------------------------------------S-------------
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---------------------------------------------------S--S-------------------------
------------------------------------S----------------------------S--------S-----
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--S------------------------------------------S----------------------------------
-------------------------------------------------S-----S------------------------
-S------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
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----S---------------------------------------------------------------------------
------------------------S-------------------------------------------------------
------------S--S---------S------------------------------------------------------
-----------S------------------------------------------------------S-------------
S-SSSSSSS-----------------------------------------------------------------------
---------------------------S-----------S----------------S-----------------------
---------------------------------------------------S----------------------------
-------------------------------------------------------S------------------------
-S-------S-------S--------------------------------------------------------------
-----------------S------------------------S-------------------------------------
--------------------S------------------------S-------------------------S--------
----------SS-------------------------S---------------S-----------------S--------
-----S--------------------------------------------------------------------------
----------S-------------------------------------------S-------S--------S----S---
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>forward_240
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------------------------------------------------------------GTCGTGTTTAGCCGAACTGC
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>reverse_1586
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-----------------------------------------------------------------GCCTGACCATCCTCC
AAGAA---------------------------------------------------------------------------
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>forward_1495
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-----------------------------------CAACCTCCTGTTCTGGGTCC-------------------------
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>reverse_2818
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-----------------CGCCAGTACTTATCCCTGCC-------------------------------------------
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