>input_sequence_59312
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------ATGTCCACTCTTCAAGGTTGGCCAGACCTCCC
GGATGACCTGCTTCATTCCATTGTTCCTCGATTGGGATCCTTCCTTGACCTTCTTGCTTTTGCTGCCGCCTGCTCCTCTT
GGCGTGCTGCCTTCTCCTCCTATCCATCCAAACACACACT---------CTTGCAAATGTTGCCACCTCTCCTCCTCCAA
CCTGATGTTCATGAGTGCCC------TCCTCGTCCTCGCCCATTTAGCAACAGCCTCGTGCCTACACATTCATGCCATGT
CACTGATTTAGCCAACCAAGGTACC-----TACATGCGTTGTCAGATTCCCCGGTTTTCTCCTTTT-GGTGAGAGCAAAT
CCCCACAAAGTCCTCTAGATAGTTCTTATTTTGGGGGTGTTTCCTATGGTCATCTCATCTTGTTTAACCAAAATCAATCA
TGTCTTGTTATTGATGTCTTTACTGGTGTTAGTTTCTCAACTCCGAAACTACCGGTCGATGAAAACACTTTCCTGGACCA
TGCTTCCCTCACGGCTCCTCTGACGTCACCCAACTCATATCTCATGGTCACCAAAGGACGCCACTATTTCTTTTGGCGTG
TTGGTAGTAAATCTTGGTTGAGACGTTCTCTTCACAATGGAACGATCGAGAAGGTCATGGTTTTCAAAGGACAAATATTT
GGCATGGATAATGACTGCAGGCTCATTATCATGAACTTGGTACCACGGATCCGAATACAGAAAATAACAGTTGA--TCCT
GGTGAAAGCATGCACAACAAATGGCATCTTCCCCACCCATGGCTTGTTGCGTGCGGCGATATGCTTCTCCTGGTTGGTTG
TCATCGATCTTTTCCATCAACAGGGGATACGTTTGAAGCTTTCCGCCTCGACCTAACGAGTGAACCTGCAAAGTGGATGA
AGGTGGAAAAGCTAGAAAATTGGGCAATCTTCATCAGCACAGACGACAGAAGCCAGCCATTGTGTTGCATGAACCCAGAG
AGATGGGGAGGGAGGAGCAATTCTATATACTTCTATTTCCATGATTCTAATAATTGGATCAATTTTGAGCTGGACAAGCC
ACTGCAGGGAAATGCCTCTACTCCAACAATCTTTATCTGCAGAGGCCGTGCCAGTATGATGCAACCTACATGGGTTGTGC
CT--AGTATGTTCTATTCGTGA----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr6A_1_TraesCS6A01G062900
AAAAAAAGTGAAAGTGAAAAATGCAATTTCTAATATTTTAGGAAAAAAAAACAGAAAGCAAAGTCCAAGAATATTAGTAT
ATGCTTGGCCCGCTTGTATGCCGAGGCTTCAGCCCAGTCCAACCAACAGCGCCAACCCCCCACCACACCCGTTCCGCCGT
CGCTCCGCCTCGTTTTCAAGCTGCCGCCGGAGAAGGACGCATGCGAAGCACCGCCGCCGACCGCATCGCCGTCGCCGTCG
TCTCCAACGCACGCCTTCTCTACAAGGCATGCTAGCTTTCCCCTTGTTTGTTTCTTGATCCCCACTTGATTTTTTTTCCA
TTAGAATTTGTTGCTTGCGTCAACGTTTCATCGTCCTGATCGATTGATACGCTGGCTGAACTTTGTTATTATTAGAGATA
GAGCCGCAGCTGTTCTCTACTTTGTAGTACAGTCCATACGTCTTGCCACCATTAATTGCTGCGAGAAAGAGTTCCAGATC
GCGTTGCCACTTTGATAGGGCCGGGCTAGATTAGATATTTAGACTCCCACTTGATTTATTTTCTGTATGTAAGAAAGAAT
TTTGAACATACTGCTATGGGCCCTAGATATTGGATCGATGGTAAATTGGGAATCATGGGATCCATTGATCCTCTATGACT
AAGACTACCTCTATCAGATACAGATAGAACTGTATAGCTGTTCTCTTTGGTCTATATATA--------------------
-------------------------CAGATGGATGTGTTTTCCATTGCCTTCAAGTAATCAATGGTAGCTTAGGGACATG
ACAGACTGAGGCAATGTTATAAATATTTACCCCATTTGATTTTCGATGTAATTGTCAGCAGCA-----------------
------------------TATTGTTTTTCATGTCAGAGCGCATATATGTTATCGCTTCTCTACCTGTTGCCTTTTCA---
-----AATGTTCACGTCATTCTTCTAATGTTTTTTCTTTTGATTCAAAATTTCTTTCAGAGAAGCTGCAGTCGCGGGTAA
CTCCAAGGTCTGCTGTGTTTGGGTCTGTCCCGTCTGAGGCTCTCAGCTATGTCCACTCTTCAAGGTTGGCCAGACCTCCC
GGATGACCTGCTTCATTCCATTGTTCCTCGATTGGGATCCTTCCTTGACCTTCTTGCTTTTGCTGCCGCCTGCTCCTCTT
GGCGTGCTGCCTTCTCCTCCTATCCATCCAAACACACACT---------CTTGCAAATGTTGCCACCTCTCCTCCTCCAA
CCTGATGTTCATGAGTGCCC------TCCTCGTCCTCGCCCATTTAGCAACAGCCTCGTGCCTACACATTCATGCCATGT
CACTGATTTAGCCAACCAAGGTACC-----TACATGCGTTGTCAGATTCCCCGGTTTTCTCCTTTT-GGTGAGAGCAAAT
CCCCACAAAGTCCTCTAGATAGTTCTTATTTTGGGGGTGTTTCCTATGGTCATCTCATCTTGTTTAACCAAAATCAATCA
TGTCTTGTTATTGATGTCTTTACTGGTGTTAGTTTCTCAACTCCGAAACTACCGGTCGATGAAAACACTTTCCTGGACCA
TGCTTCCCTCACGGCTCCTCTGACGTCACCCAACTCATATCTCATGGTCACCAAAGGACGCCACTATTTCTTTTGGCGTG
TTGGTAGTAAATCTTGGTTGAGACGTTCTCTTCACAATGGAACGATCGAGAAGGTCATGGTTTTCAAAGGACAAATATTT
GGCATGGATAATGACTGCAGGCTCATTATCATGAACTTGGTACCACGGATCCGAATACAGAAAATAACAGTTGA--TCCT
GGTGAAAGCATGCACAACAAATGGCATCTTCCCCACCCATGGCTTGTTGCGTGCGGCGATATGCTTCTCCTGGTTGGTTG
TCATCGATCTTTTCCATCAACAGGGGATACGTTTGAAGCTTTCCGCCTCGACCTAACGAGTGAACCTGCAAAGTGGATGA
AGGTGGAAAAGCTAGAAAATTGGGCAATCTTCATCAGCACAGACGACAGAAGCCAGCCATTGTGTTGCATGAACCCAGAG
AGATGGGGAGGGAGGAGCAATTCTATATACTTCTATTTCCATGATTCTAATAATTGGATCAATTTTGAGCTGGACAAGCC
ACTGCAGGGAAATGCCTCTACTCCAACAATCTTTATCTGCAGAGGCCGTGCCAGTATGATGCAACCTACATGGGTTGTGC
CT--AGTATGTTCTATTCGTGACCTG--------------------CTTGATGCATGGTCTATTCATGACCTGCTTGATG
CATGGTTATTACTGCTCGCCGTGGTAGCTTCCCCTATAAGATGCCTTGACTTTTATATAGGTCTAGCCCAAAGAAATTTT
GAACCTTTGATATAGTTGTAGTATAACCATGTCAGATGTAATTGGAATATGGAGTTGTCGGAGCCAATTTTTAGCCTCTT
AGCTCAGCATGCATGAAAATGTTGTTTCAATTTATTTTAAGCAAGCTCTCAGCTTGTTCCGAAAATTTGCTCTTCGAGTA
GAGAACAGAACAGTGGCTCATTTGCAGTTATGTAGGAGATGGTCACGGTAGCCGGAGCACTGAGGATTTTGCAGTTAGTT
CATCCTTGAGGGCTTACTCAAGCTTATGCGCATATAAGACATGTGTTTAGACCTTATAAAAGATGTGTTTATGCTAGCAT
AAGGGCTTAGGGGATTTCTAACCGATCCTCAATAACCAGTTAGAGGAGTAAAAACCCGGTTTTACTTCTCTAACCGGCAC
CTAGCCGATCCCCAATCAACGCTAGTGGAGGATAAATTATCCTCAGCCGCGCCACGCCTCCCTATATTTACTCCATTATA
CGGTGGTCGAGTAAAAAAAATCTCACTTCGTCTCCTCTTCCTCTCCGCTTCCTCCGCTTCTTCTTCTCCCTATATTTACT
CCATCATACGGTGGTCAAGTAAAAAATGTCCTTACTCAAGCTTATGCGCTTTCTCACCTCTCAGTTAGCCTTGCTGTTCA
CTACTCTATTTTTTTTGCGGGTGCACTACTCATTCTTTTGCTGTAACG--------------------------------
----------GGCAGGTTTGAACTGCAGTTTTGAGGCATGTTGGGAGTGGGGCTTTGTGAATTTTGTGCGCGAGCAAGGG
GTTCTTCTTCAGGTGCATGGTTTCGTTTCAGGTTCGCGTGTCAAACTGATGACGGAACCATGCATATCGTGTTTTATGCA
ATATATAAACTTGAATAATATCATGCGAAAAGTCTGCCCCAGCA
>chr6D_147
--------------------------------------------------------------------------------
------------------------------------------------------------------ACCTGTTCCGCCGT
CGCACAGCCTCGTTTTGAAGCGGCCGCTGGAGAAGGACGCATACGAAGCGCCGCCGCCGACCGCATCGCTGTCGTCGTCG
TCTCCAACGCACGACTTCTCTACAAGGCATGCTAGCTTTCCCCTTGTTTCTTGATT----CCCACTTGATTTTTTTTCCA
TTACAATTTTTTGCTTGCGTAAT-GTTTCATCGTCCTGATCGATTCATACACTGGCTGAACTTTG---TTATTAGAGATA
GAGCCGCAGCTGTTCTCCACTTTGTAGTACAGTC----CGTCTTGCCACCATTAATTGCTGCGAGAA-GAGTTCCAGATC
GCGTCGCCACTTTGACAG-----GGCTAGATTAGATATTTAGACTCCCACTTGATTTATTTTC----TGTAAGAAAGAAT
TTTGAACATACTGCTATGGGCCTAGAC---TGGATCGACGGTAATTTGGGAATCATGGGATCCATTGATCTCCTATGACT
AAGAATACCTCTATCAGATACAGATAGAACTG--TAGCTGTTCTCTTTGGTCTATATATATATTAAGAAAAAAAAAAGTA
GAATCGGTATCATGCTCCGAAGATACAGATGGATGTGTTTTCCATTGCCTTCAAGTAATCAATGGTAGCTTAGGGACATG
ACAGACTGAGGCAATGTTATAAATATTTACCCCATTTGATTTTCGATGTTACTGTCAGCAGCATGCGTACCCAATCTCTT
GCTGTGTTATTGTGTCACTATTGTTTTTCATGTCAGAGCGCATATATATATATATATATATATATATATATATATATATA
TATATAATGTTCACGTCATTCATCTAATGTTTTTTCTTTTGATTCGAAATTTCTTTCAGAGAAGCTGCAGTCGCGGGTAA
CTCCAAGGTCTGCTGTGTTTGGGTCT--CCCGTCTCAGGCTCTCAGCGATGTCCACTCTTCAAGGTTGGCCAGACCTCCC
GGATGACCTGCTTCACTCCATTATTCCTCGACTGGGATCCTTCCTTGACCTTCTTGCTTTCGTTGCCGCCTGCTCCTCTT
GGCGTGCTGCCTTCTCCTCCTATCCATCCAAACATACCCT---------CTTGCAAATGTTGCCACCTCTCCTCCTCCAA
CCCGATGTTCATGAGTGCTC------TCCTCATCCTCGCCCATTTAACAACAACCTCGTACCTAAACATTCATGCCATGT
CACTGATTTAACCAACCAAGGTACT-----TACATGCGTTGTCAGATTCCCCAGTTTTCTCATTTT-GGTGAGAGCAAAT
CCCCACAAAGTCCTCTAGATAGTTCTATTTTCGGGGGTGTTTCCTATGGTCATCTCATCTTGTTTAACCAAAATCAATCA
TGTCTTGTTATTGATGTCTTTACTGGTGTTAGTTTCTCAACTCCGAAACTACCGGTCGACGAAAACACTTTCCTCGACCA
TGCTTCCCTCACGGCTCCTCTGGCGTCACCCAACTCATATCTCATGGTCACCAAAGGACGCCACTATTTCTTTTGGCGTG
TTGGTAGTAAATCTTGGTTGAGACGTTCTCTTCGCAATGGAACGATCGAGAAGGTCATGGTCTTCAAAGGACAAGTATTT
GGCATGGATAATGACCGCAGGCTCATTATCATGAACTTGGTACCACGGATCCGAATACAGAAAATAACAATTGA--TCCT
GGTGAAAGCATGCGCAACAATTGGCATCTTCCCCGCCCGTGGCTTGTTGCGTGCGGAGATATGCTTCTCCTGGTTGGTTG
TCATCGATCTTTTCCATCAACAGGGGATACGTTTGAAGCTTTCCGCCTCGACCTAACAAGTGAACCTGCAAAGTGGGTGA
AGGTGGAAAAGCTAGAAAATTGGGCAATCTTCATCAGCACAGACGACAGAAGCCAGCCATTGTGTTGCATGAACCCAGAG
AGATGGGGAGGGAGGAGCAATTTTATATACTTCTATTTCCATGATTCTAATAATTGGATCAATTTTGAGCTGGACAAGCC
ACTGCAGGGAAATGCCTCTACTCCAACAATCTTTATCTCCATAGGCCGTGGCAGTATGATGCAACCTACGTGGGTTGTGC
CT--AGTATGTTCTATTCGTGACCTG--------------------CTTGAT---------------------------G
CATGGTTATTACTGCTCGCCGTGGTAGCTTCCCCTATAAGATGCCTTGACTTTTATGTAGGTCTAGCCCAAAGAAATTTT
GAACCTTTGATATAGTTGTAGTATAACCATGTCAGATGTACTTGGAATATGGCGTTGTCAGAGCCAATTTTTAGCCTCTT
AGCTCAGCATGCATGAAAATGTTGTTTTTATTTATTTTAAGCAAGCTCTCAGCTTGTTCCGAAAATTTGCTCTTCGAGTA
GAGAACAGAACAGTGTCTCATTTGCAGTTATGTAGGAGATGTTCACGGTAGCCCGAGCACTGAGGATTTTGCAGTTAATT
CATTCTTGAGGGCTTATTCAAGCTTATGCGCATATAAG----------------------AGATGTGTTTATGCTGGTAT
AAGGGCTTAGTGGATTTCTAACCGAACCCCAATAACCGGCTAGAGGAGTAAAAAACCGGTTTTACTTGTCTAACCGGTGC
CTAGCCAATCCCCAATCGGTGGTAATGGGG--------ATCCTCAACCGCGCCACGCCTCCCTATAGTTACTCCACCGCT
CGGTGGCCAAGTAAAAAAAACTCAT-TTCGTCTCCTCTTCCTCTCCGCCTCCTCCGCTTCTTCTCCTCCCCATCCCCGCC
GCCGGCGACTCGCCTCCCGCCTCCCAATGGTCGGACCCCATCGCTGTCGCTCCCCGCTGCCGATCCGCGCCGCAATGCCA
CCACTCCCACGGTTCGCCTTCAAGCTTCGCATCCTCGGGCCGCAGCAGCACGGCCGATGCACCGGCCCCCGCCTGCTTCG
CCGACTACCAGGCAGGGTTGAACTGCAATTTTGAGGCATGTTGGGAGTGGGACCTTGTGAATTTTGTGCGTGAGCAAGGG
GTTCTTCTTCAGGTGCATGGTTTCGTTTCAGGTTCGCATGTGAAACT---------------------------------
--------------------------------------------
>chr7A_888
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TCATTTTTCTAATTTTTTTACTTTTAATTCAAAATTTCTTGTAGACAAGGTGTGGTCTCTTGTAA
CTCCGTGATCTGCTGTTTTTGGGTCGCTACCG--------TCTCAAGTATGTCCATTTTTCAAGGCTGGCCAGACCTCCC
GGACGACCTGATTCACTCCATTGTTCCTCGATTGGGATCCTTCCCTAACCTTCTTGTGTTTGCTGCCACCTGCTCCTCTT
GGTGTGTGGACTTCTCCTCCTATCCGTGTAAACAGATAGT---------CTTGC---------CATCTCTCTTCCTCCTA
CCCGACTTCCTGGCATGCTC------CCCCCGTCCTTGCCAATTTAGCAACAGCCTCGTACCTAAACATTCATGCTATGT
CACTACTTTAGCCAACCAAGACACGTACTGTACATGTGTTGTTAGATTCCCTAGTTTCCTCG-TTT-GGTGAGAGTAAAT
CCTGACAAAGTCCTTTGGAG-GTTCTTATTCCAGGAGTGTTTCCTAT-GCCATCTCATCCTGTCCAACCAAAATCAATCA
TGTCTTGTTATTGATGTCTTCACGGGTGTTAGTGTCTCAACTCCACAATTATGGGTCGACGCAAACACTTTCCTCTACCG
TGCATCCCTCACGGCTCCTCTGGCGTCACCCAACACATATTTGTTGGTTACCACTGGAGGCCACAATTTCTTTTGGCGTG
TTGGTGGTAACTCTTGGTTGAGATGTTCTCTTCGCAATGGAACGATCGAGAAGGTTGTGGTCTTCAAAGGACATGTATTT
GGCATGAACAATGACCGCATGCTATTTATCATGAACTTGGTACCATGGATCTGAATACAGAAAATTGCAGTTGA--TTTT
GGTGGAAACTTGCCCAACAAATGGCATCTTTCTCACCCGCGGCTTGTTGCGTGCAGCGATATGCTTCTCCTGGTCAATGA
TCATCGATCTTTTCCATCAATAGCAGATACGTTCGAAGCCTTCTTCCTCAACCTAGCGAGTGAACATGCAAAGTGGGTGA
AGGTGGAAAAGCTAGAAAATTGGGCAATCTTCATCAACACCGATGAGAGAAGCCACCCATTGTGTTGCATGAACCCAGAG
AGATGGGAAGGGATGAGCAACTGAA-AAACATCTATTTGCATGATTCTGATAATTGGATATCTTTTGAGTTGGA-AAGCC
GTTGCTGGGAGATGCCTCTTTATCTGCAT-----------ATAAACCGTGGCAGTATGATGCAACCAACGTGGGTTGTGC
CTCTAGTATGTTCTA-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr7D_888
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TCATTCTTCTAATATTTGTCCTCTG-ATTCATAACTTATTTCAGAGAAGCTGCAATCACCTGTAA
CACCAAGGC--GCTGAGTTTGCATCTAGGTTG--------TCTCAGCTATGTCTACGCTTCAAGGTTGGGCAGACCTCCC
AAATGACTTGCTGTACTCTGTTGTTGCTCGGTTGGGATCCTTCCCCGATCTTCTTGCTTTCGCTGCAACCTGCCCGTCTT
GGCGTGCTTCCATTTCCTCATATCCCTCCAAATCGACATT---------GTTGC---------CACCTCTTCTCCTCCAA
CCTGGCGTCCCTGCATGCTCTTCTCGCCCTCGCCCTCGCCCATTGAGCAACAACCTTGTACTTAGACGCTCATGCCATGT
TACTGATCTTGCCAACAAAGACACC-----TACATGTGCTGTCAGATTCCCCAATTTGCTTG-TTTTTGTGACAGCAAAT
CCCCATCGGGTCCGCTGGATGAATTTTTTTTGGGGAGTGTGTCCTATGGCCATCTCGTCTTGGCCAACCGACAACAATCA
TGTCTTCTGGTTGATGTCTTCACAGGTGTTAGTGTCTCAGCTCCGCAGCTACCCGTCAACGGACGCATCCTCCTCAACTA
TGCTGCCCTCACGGCTCCTCTTTCGTCACCCAACTCATATCTCCTTGTCAATGTTGGGCGCCACAATTTCTTTTCGCGTG
ATGGTAGCGATTCTTGGTTGAGACGTTCTCCTCGCAATGGGACATTTAAGAAGCTCGTGGTCTTCAAAGACCAGGTCTTT
GGCATGGATCATGATCGCATGCTCTATATCGTGCACTTGGAACCCCGGATACGCATACAGAAAATAGCAGTTCA--TCTG
GATGGAAGCATGGCCAACAAATGGCATCTTAAGCAACCGTGGCTTGCCGCATGTGGTGACATGCTTCTCATGGTCGGTTG
TCAGAAACATTCTCCATCAACAGGGGACACTTTTGAAGCTTTCCGACTGGACGTATCGACTGAACCTGCAAGGTGGGTAA
AGGTGGAGAAGCTAGAAAACTGGGCGATCTTCATCAGTATCGACAAGAGAATCCAGCCCTTGTGTTGCATGAACCCAGAG
ACATGGGGAGGGAGATGCAACTGTATATACTGCTGTAATAGGAAAGAG------TGGGTCGCATTTGAGTTGGGCCAGCC
GCCGCAGGGAGATGCCTCCAATCCAAAAGTTTATATTCACATAAACTGTGGCAGTATGATGCAACCTACATGGGTTGTGC
CC--AGTATGTTCTATTCGTGTCCGTGAACCGTGATGACTGATGATCTTGAT---------------------------G
CATGGTTATTATTAGTCCCCGTAGTAGCTCCCTCTGTAAGATATCTCGACTTTATA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr4A_993
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TCTCAACTATGCCCAGTTTTCAAGGTTGGCCAGACCTCCC
GAACGACCTGATTCACTCCATTGTTCCTTGGTTGGGATCCTTCCCTAACGTTCTTGTATTCGCTGCCACCTGCTCCTCTT
GGTGTGTGGCCTTCTCCTCCTATCTGTCTAAACAGATGCT---------CTTGC---------CATCTCTCTTCCTCCTA
CCTGACTTCCTGGCGTGCTC------TCCTCGTCCTTGCCAATTTAGCAACAAACTCGTACCTGAACATTCATGCTATGT
CACTACTTTAGCCAACCAAGACACC-----TACATGTGTTGTTAGATTCCCTAGTTTCCTCG-TTTTGGTGAGAGTAAAT
CCCGACAAAGTCCTTTGGGG-GTTCTTATTTCAGGGGTGTTTCCTAT-GCCATCTCATCCTGCCCAACGAAAATCAATCA
TGTCTTCTTATTGATGTCTTAACGGGTGTTAGTGTCTCAACTCCACAACTACGGGTCGACGCAAACACTTTCCTCTACCA
TGCTTCCCTCACGGCTCCTCTGGCATCACCCAACACATATTTGTTGGTTACCACTGGACGCCACAATTTCTTT-CGGGTG
TTGGTGGTAACTCTTGGTTGAGATGTTCTCTTTGCAGTGGAACGATCGAGAAGGTTGTGGTCTTCAAAGGACAT-TATTT
GGCATGAACAATTACCACATGCTATTTATCATGAACTTGGTACCATGGATTTGAATACAGAAAATTGCAGTTGAGATTTT
GGTGGAAGCATGCCCAACAAATGGCATCTTTCTCACCCGTGGCTTGTTGCGTGTGGCAATATGCTTCTCCTAGTCGATGA
TCATCGATCTTTTCCATCAACAGAAGATACGTTTGAAGCTT-CTGCCTCAACCTAGCGAGTGAACCTGCAAAGTGGGTGA
AGGTGGAAAAGCTAGAAAATTGGGCAATCCTCATCAACACCGATGAGAGAAGCCACCCATTGTGTTGCATGAACCCAGAG
AGATGGGAAAGGATGAGCAACTGAA-AAACTTCTATTTGCATGATTCTAATAATTGGATCTC-TTTGAGTTGGA-AAGCC
GTTGCAGGGAGATGCCTCTTTATTTGCAT-----------ATAAACCGTGGCAGTATGATTCGACCAACGTGGGTTGTGC
CTCTAGTATGTTCTATTCGTGTCCAT--------------------GTTGAT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr7D_1001
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------ATGTCCAATCTCCAAGGCTGGGCTGAACTCCC
GGATGCCCTGCTTCATTCCATTGTTGATCTGTTGGGATCCTTCCCTGACTTTCTTGCCTTCGCTTCCACCTGCCACTCTA
GGCGTGCTGGCTTCTCCTCACATCTGTCCAAATCTACATTCTCAACACGCTTCC---------CGCCTCTCCTCCTTCAA
CATGAGGTCCCTTTGTGCTC------TCCTCGT--CCTCCCTTTTAGCAAGAGCCTCATACTTGAACGTCCTTGTTATGT
TACTGATCTAGCCAACAAAGACACC-----TACATGTGCTGTCAGATTCCCCTATTTGCTCA-TTATGCTGATAGTGATG
CCCCATCGAGTCCTCTGGATAGTTTTTATTTCAGGGGTGCTTCCTAAGGCCATCTCATCTTGTCCAACAG---ACAATCT
TGTCTTGCCGTTGTTGTTTTCACAGGTATTAGTGTCTCACCTCCACAATTGCCGGTCGACGAATACGCTTAGTCCTATTA
TGCCGCCCTCACTGCTCCTGTATCACCACCCAACTCGCACCTCCTGGTCACCACTGGATGCCAGAATTTCTTTTGGCGTG
TTGGTAGCCACACTTGGTTGGAATGTTCTCCTCAAATTGCAATGCTCAAGCAGATAGTGGTCTTCAAAGGCCAGGTCTTC
GGCATGGATTACGAGCACATGCTCTTTATCATACACTTGGTACCCCAGATTCGCATACAGAATCTAGCAGTTGA--TTGG
GAAGGAAGCATGACCAGCAAATGGCATCTTTCCCAGAAGTTGCTTGTGCGGTGCGGGGATATGATTCTCCTGGTCAGTTT
TCATCGATCTGTTCCATGAACAGGGAATACGTTTGAAACCTCCCGCCTCGACTTATCGAGTGAACCTACAAATTGGGTGA
AGCTGGAAATGATAGAAA-CTGGGCAGTATGTATCAGCACTGACGAGAAAAGCTAGCCATTGTGTTGCATGAACCCAGAG
AGGTGGGGAGGGAGGAGCAACTGCGCATACTGCTATTTCCATGATTCTACAAGTTGTATCACATTTGAGTTGGGTGAGCC
GTAGAAGGGACATGCCCCCAATCCAAGCGACTTTATTCTCATAAGCTGTGGCAGTACGATGCAACCTATGTGGGTTGTGC
CC--AGTAT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>chr4A_1014
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AAGGTTGGGCTAACCTCCC
AAATGGCCTGCTTCACTCTATTGTTGCTCTTTTGGGATCATTTCTTGACCTCCTTGCCTTTGCTGCCACCTGCCCCTCTT
GGCGTGCTGCCTTCTCCTCCTATCCATGCAAATCGACGCT---------CTTGC---------CACGTCTCTTCATCCAA
CCTGATATCCCCGTGTGCTC------TCCTCGCCCCCTCCCATTTAGCACCACCCTGGTACCTAAACGCCCATGCTACAT
CACCGACTTAGCCAACCAAGACAGG-----CACATGTGTTGTGAGATTCCCCTACTTGCTAA-TTCTATTTTCAGGATTG
GCCAATGGACTCCTCTGGAGAACTTCTACTTGAGGGGTGCTTTATATGGCAATCTCATCT-------------ACAATCA
TGTGTTGTTGTTGATGTCTTCACAGGTATTAGTGTCTCACCTCCACAACTGCCGGTCTATGAATACCCTCAGCTCTGCTA
TGGTGCCCTCACTTCTCCTCTAGTGTCACGCAACTCACATCTCATGCTCACCACTAGATCCCACCATTTCTTTTGGCGTG
TTGGTAGTCAGTCTTGGTTGAGACATGTTGCTCACAACAGAACAATCAAGCAGCTATTGACCTTCAAAGATCAGGTATTT
GGCATGGCTGAAGATCATAAGCTCTTTATCATGCACTTGGCACCCCGGATACGCATACAGGAAATAAGAGTTGA--TTGG
GAGGGAACTAGGACCAATGAATGCTTCAAGCA-------------GTAGCTCATGGCGATATGCTTCTCATGGCCGAGTT
CACGGTAGCTTTTCCATCATCAGGGAAAGACGTAAAAGCCTTTCGCCTTGACTTGTCGAGTGAGCCTGCAAAGTGGGTGA
AGTTGGAAAAGCTAGAAAATTGTGCAATCTTCGTCAGCTTCGAGGAGAAAAGCCAGCCATTGTGTTGCATTAACCCAGAG
AGATGGGGAGGGAGGAGCAACTGCATATACTGCTGTTACAATGGTTCTAATGGTTGTATCACATT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S----------
---S-S----------S----S-----S--------------S------S-------------------S----S-----
-------------S-----------------------------------S--SS--SSSS--------------------
---S-----S----------S-SS---------------------S----S--------------SSS------------
-----------------S----------------SSSS-----------------------------S------------
----S----------S--SSSSS----------------------------------------SSSS-------------
----------------------SSSSSSSS--------S-----S-------------------------SS--------
----S---------------------------SS----------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S-S----------------------------
-----------------------------------------------S-SSSSSSS-S-S--SS-S-SSSSS-S-SS---
--------------------------------------------------------------------------------
--------------------------S--------S--------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
------------------S----------------------------------------S----S---------------
----------------------------------------------------S--------S------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------S-----
----------------------S---------------------------------------------------------
-------------------------------------------------------------S------------S-----
---------------S----------------------------------------------------------------
-------------S------------------------S-----------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------S--S--------S-----------------------------
----------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS-
--------------------------------------------------------S-----------------------
----------------------------------------S-----------S------S--------------------
---------------------------SS---------------------------------------------------
---------------S-------------------------S-----------S-----------------------S--
---S------------S---------------------SSSSSSSSSSSSSSSSSSSSSS---------------S-S--
----------S--------------S--S--------S-S--------------S------------S---------SS-
------S----------SSS-S--S---S-SSSSSSSS-------S--------------------S--------SSSSS
------S-S-----------SSSSSS----------------------S---------------S-----S--SSSSS-S
S-SSSSS--SSSSS--SS-SSSSSS-SSSSSSSSSS-SSSSSSS--SSSS-S-S-S-SS-SS-SSSSSS-SSSSSSSS--
-S----SSSSSS--SSS-SSSSSSSS-SSSSSSSSSSSSS-SSSSSS---------------------------------
----------------S----------S-----------------------S-S----------------S---------
-------------------------------------S---S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_499
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
GCGTTGCCACTTTGATAGG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_1472
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------TGGGGGTGTTTCCTATGGTC-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_951
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TCGCTTCTCTACCTGTTGCC---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
>reverse_2798
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------CAC
CTAGCCGATCCCCAATC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------
