>input_sequence_59283
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------------------------------------------------------------ATGGAGCTAATGATGATCAA
GAAGCAACACATGGTCCTCCTAGCTCTCGTCATGTCCATTCAACATGGTAATTACAGTGAGCATCCCTGCTCTAAAAGAC
TTTCACTTCACGTGCACATACATTATTTTCTTTACCATCTTTTAGTTGTACTAGAACTCTTGTGATCTTGTCCTCCTGGT
TGTTTTTGCATTGGTACATGTATATAACTATATAGTACTCCGTATATCCATTGTCTGCCATTTGATTTTTTGTCTGCATG
CATCATGCACATGCATGTGAAGCAGATTGGGCGAATGGCGCCTCGAGAACAAGAGAATGGCGCAAGCTTGTCAACTCCCC
GGCATTGCCACCATACCAAGACGTGGTAGGAGGAGCCCGGCCACCAACTCCGGCACACGACGTTCAGCCGTCCCCTCCGT
ACTGTGCGTACCCTCCCCCCGCCAATCCCACCTCACCGGCGGCGCCGTCGATCCCCCCTCCAGCCGGTGCGCTGCCACCG
TCCACGGCACCGGTCGGCAACCCCAGCCCGCCAGCCAACGCACCAGCGAGCCCCCGCGCGGGCCCTCCGGCTGGTGCTCC
ACGGGCGGGAGGCCCGACAGCCATCGGCGCGCCGCAGGGGCTGTGGTGCGTGGCGAACCCGACGGTGGAGAGCGTGGACG
TGCAGGCGGCGATGGACTACGCGTGCGGGTCGGGCGCCGACTGCGGCATGGCAGCGCCCGGCGGGCCGTGCTACCTACCG
GACACGCTGATGGCGCATGCCTCCTTCGCCTTCAACAGCTACTGGCAGCGCAACAAGGCCGCCGGCGGCACCTGCGACTT
CGCCGGCTCCGCCATGCTCATCACCAAAGACCCCAGTAAGCCACTATCTCAAGTTTGCTCGGCCT-----AAGGCCTGCG
AGTCTATATGGGCCCAATTAATAATTTTACTAGTAGAACAGAAGCACCTAAATGGACTTGCCTAAAAAAACAAATCAACT
AAATGGACGAGGGCTCCGCCCGGCCCATTCAAATATGAAGAGAGAATTATCTGTCCCACTTTCGAATTTGGGTTGTGCTT
TCAAAATTTTGACATATTTTTAATGGATTTTTTATTAAATTTGGTTTTTAATATTCTGTGCAGGTTACGATGAGTGCCGG
TACGTGTACATGTGA-----------------------------------------------------------------
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>chr7D_1_TraesCS7D01G468800
GAGCACTATATATCGCACACAGAAACTAATTAATCCAGTCAAGCTCTTTTGCAAAAATAATGTTCTACTATTACTCCTGC
TGATTTTGGTACCGTAAAAGATCTCCACAAAGTACTTACATGATGCAAACATGACACATACATACAC-------------
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-------------------------------------------------------AATAATGTCTGAGCTAAATTTCCCA
TGTCGTGGTGTTGTCAGCTCGCTGTGATTGAC--AAGACACGGCTTTTCTCTAGCCCTAGCTACTTAC---TAGTACTAG
TATAATATGGATGCATTCATACATGACAAATCAAACAAAATGGAGTAGCAGGTTTGAGGCCTTGAGTGGAACCAAAGCAA
CGGAAGAAAAACACTAAT--AAATACACCTGCTGTTCTGCCCTTTATTTTCTTTCGATTTTGTTCCCTGCATTTCTCTCT
GGCCAAGCAAGCACATG-TGCCAAAACTGCAGCTAGAGAAAAGAAGCAAACATGCATGGCCCTTGAGTTGAAATGTTTTC
ATAGAATATTTGTAGCATTTTAATCCATAATATTTTTGTTTGGGTGCCCGGGGTCAAAGAAAATGAACCAAAATGCCTTC
ATGGGTGGCATTGCATAAAAACATCTTACCCTTCGAATTTTCAGCAAATTTCCGTGAAATATGCAAAGAATCCATAATGA
GTCATG------------------------ACTACAAATTGCTATATTCTCATGACTAAAAATCAATTGCTTTAGTTTCT
GTATTCAGGAAGCCAGGACATCTCCAATGTTTCATTTTATTGATACGTTTTCTGCAACTTAATTGGGAAGGCTCTTAGGT
TTAATCAACATATCAGTCCATGCAACTTTATGGAAAGAGACTTGCTGGCTGGCTAGCTAGCTAGCATCCATCTGGTGAAT
TCTTGCTGCTGCCTCCCCTTTATGTGCCCACTTGAGACTTGGGTACTACGTACTCCCCATATTCCTTTCTAGCCCTACAA
CAATCTCATTCCCACGCATCATATATAAATGCAATTTGCCTCATGTCTTGATCACAAACCATGGAGCTAATGATGATCAA
GAAGCAACACATGGTCCTCCTAGCTCTCGTCATGTCCATTCAACATGGTAATTACAGTGAGCATCCCTGCTCTAAAAGAC
TTTCACTTCACGTGCACATACATTATTTTCTTTACCATCTTTTAGTTGTACTAGAACTCTTGTGATCTTGTCCTCCTGGT
TGTTTTTGCATTGGTACATGTATATAACTATATAGTACTCCGTATATCCATTGTCTGCCATTTGATTTTTTGTCTGCATG
CATCATGCACATGCATGTGAAGCAGATTGGGCGAATGGCGCCTCGAGAACAAGAGAATGGCGCAAGCTTGTCAACTCCCC
GGCATTGCCACCATACCAAGACGTGGTAGGAGGAGCCCGGCCACCAACTCCGGCACACGACGTTCAGCCGTCCCCTCCGT
ACTGTGCGTACCCTCCCCCCGCCAATCCCACCTCACCGGCGGCGCCGTCGATCCCCCCTCCAGCCGGTGCGCTGCCACCG
TCCACGGCACCGGTCGGCAACCCCAGCCCGCCAGCCAACGCACCAGCGAGCCCCCGCGCGGGCCCTCCGGCTGGTGCTCC
ACGGGCGGGAGGCCCGACAGCCATCGGCGCGCCGCAGGGGCTGTGGTGCGTGGCGAACCCGACGGTGGAGAGCGTGGACG
TGCAGGCGGCGATGGACTACGCGTGCGGGTCGGGCGCCGACTGCGGCATGGCAGCGCCCGGCGGGCCGTGCTACCTACCG
GACACGCTGATGGCGCATGCCTCCTTCGCCTTCAACAGCTACTGGCAGCGCAACAAGGCCGCCGGCGGCACCTGCGACTT
CGCCGGCTCCGCCATGCTCATCACCAAAGACCCCAGTAAGCCACTATCTCAAGTTTGCTCGGCCT-----AAGGCCTGCG
AGTCTATATGGGCCCAATTAATAATTTTACTAGTAGAACAGAAGCACCTAAATGGACTTGCCTAAAAAAACAAATCAACT
AAATGGACGAGGGCTCCGCCCGGCCCATTCAAATATGAAGAGAGAATTATCTGTCCCACTTTCGAATTTGGGTTGTGCTT
TCAAAATTTTGACATATTTTTAATGGATTTTTTATTAAATTTGGTTTTTAATATTCTGTGCAGGTTACGATGAGTGCCGG
TACGTGTACATGTGATTGCAACGGAGCTCCTCATAGAAATGGAGCA-ATTTCCAAGACTATCGATAAGCACACGGTTCAC
ACGACTTCTGTATGATGTAAATGCATCGTTTTTTTAATGGTTGGACCCATGGAATGTCACGGGTACATGAACATTTGCTC
TGGACTATTCAACTATTTTTTCCCCGTAAATAATAGTACTGAATTTTGTTAAACAATGCATGTATTTTTACAACATTTTA
GTAAAAATTTAACCCTTAATTTGGTTAATAAATGATAGTTCTAACTATTGCACAAATGATAAATCATTATACTCACGTTT
AAGATAAGTTTTCAATGGTATACTTTTTTGTGACATGTAACTCATATTTTGTTGACCAAAATGGTCATAAGAAAATTGAA
ATGCGGCTGATACTTATAAACATGACAGGAGCGAACAATGTGTCTTTACCATTTGATCCATCTCAAACGACATAAATTTA
GTCCCGACTTGTTTCTCAAAACGATAACATGATTTAATTTTGTTTTAAAATAGGATGTTGCAATTGTAAGTACATGTACT
TTTTACGGAAACATTTTGACTTAATATGAAAATTCTGCATAACTATCACAATTAAAAAATATCGATACAAATATCATTTG
AACTGTATCTGCAACAAACTCAGATTTATTTCAATTGGCAAGGGTGTTGCCATGGTCGGGTGAGGTCATGTGAGAACAAA
ACATGATCTCGATTTAGAGAAATTAATGATATGTTCATGTGTTAGTATAAGCATACTAACGGAGGATAATGGTTGCAACA
AGTTTTGACTCTGTGATATCACGTCCACAAAATATATTTATTCGATGACATATCATTAAATAAAATGTTTTTTGGTGTGT
ATTAACTAGTATTTTCCCATTAATTAGGACGTATACCTTATAAGCTTTTACATGCTCTAATTTTGTCCTTCTATTCCTTG
TCTTTTGATTTTTTTAATATATTAATTTCTTGTACAAATAAATCAGTATGCTAGCA
>chr7B_1
GAGCAGTATACATCGCGCACAGTAACTAATTAATCCAGTCAAGCTCTTTTGCAAAAATAATGT---ACTATTACTCCTGC
TGATTTTGGTACTGTAAAAGATCTCCACAAAGTA-TTACATGATGCAAACATGACACATACATACAC-------------
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-------------------------------------------------------AA---------------ATTTCCCA
TCTCGTGGTGTTGTCAGCTCGTTGTGATTGACAAAAGACACGGCTTTTCTCTAGCCCTAGCTACTTAC---TAGTA----
--TAATATGGATGCATTCATACATGACAAATCAAACAAAATGGAGTAGCAGGCTTGAGGCCTTGAGTGGAACCAAAGCAA
CGGAAGAAAAACACTAAT--AAATACACCTGCTGTTCTGCCCTTTATTTTCTTTCGATTTTGTTCCCTGCATTTCTCTCT
GGCCAAGCAAGCACATG-TGCCAAAACTGCAGCTAGAGAAAAGAAGCAAACATGCATGGCCATTGAGTTGAAATGTTTTC
ATAGAATATTTGTAGCATTTTAATCCATAATATCTTTTAATGGATGTCCGGGGTCAAAGAAAATGAATCAATACTCCTTC
ATGCATGGCATTGCATAAAACTTCCGTCTCTTCGAA--TTTCAGCAAATTTCCGTCAAATATCCAAAGAATCCATAATGA
GTCATG------------------------ACTACAAATT-----------------------CAAATGCTTTAGTTTCT
GGATTCAGGAAGTCAAGACAACTCTAATCTTTTATTTTATTTATTCGTTTTCTGAAACTTAATTGGGAAGGCTCTTAGGT
TTAAGTAACATATCAGTCCATGCAACTTTATGAAAAGAGACTTGCT----GGCTGGCTAGCTAGCATCCATCTGGTGAAT
TCTTGCCGCTGCCTCCCCTTTATCTGCCCACTTGAGACTTGGGTACTACGTACTCCCCATATTCCTTTCTACCGCTACAA
CAATCTCATTCCCACGCATCATATATAAATGCAATTTGCCTCATGTCTTGATCACAAACCATGGAGCTAATGATGATCAA
GAAGCACCACATGGTCCTCCTAGCTCTCGTCATGTCCATTCAACATGGTAATTACAGTGAGCATCCCTGCGCTAAAAGAC
ATCCACTACACGTGCACGTACATTATTTACTTTACCATCTTGTAGAAG-T-----ACTCTTGTGATCTTGTCCTCCTGGT
TGTTTTTGCATTGGTGCATGTA--------------------TATATCCATCGTTTGCCATTTGATTTTT-GTTTGCATG
CAT------CATGAATGTGAAGCAGATTGGGCGGATGGCGCCTCAAGAACAAGAGAATGGCGCAACCTTGTCAACTCGCC
GGCATTGCCACCATACCAAGACGTGGTAGGAGGAGGCGGGCCTCCAACTCCGGCACACGACGTTCAGCCGTCGCCGCCGT
ACTGCACGTACCCTCCCCCCGCCAATCCCACCTCACCGGCGGCGCCGTCGATGCCCCCTCCAGCGGGTGCGCCGCCACCG
TCCACGTCACCGGTCGGCAGCCCCAGCCCGCCAGCCAACTCGCCGGCGAGCCCCCGCGCGGCCCCTCCGGCTGGTGCTCC
ACGGGCGGGAGGCCCGGCAGCCATCGGTGCGCCGCAGGGGCTGTGGTGCGTGGCGAACCCGACGGTGGAGAGCGTGGACG
TGCAGGCGGCGATGGACTACGCGTGCGGGTCGGGCGCGGACTGCGGCATGGCGGCGCCCGGCGAGCCGTGCTACCTTCCG
AACACTCTGATGGCGCACGCGTCCTTCGCCTTTAACAGCTACTGGCAGCGTAACAAGGCCGCCGGCGGCACCTGCGACTT
CGCCGGCTCCGCCATGCTCATCACCAAAGACCCCAGTAAGTCACGATCTGCGACGTTGCTTCAGGCCACCAAGGCCTGCG
AGCATATCAGCCCATAATACTTACTGGCCCAGGACTACTTATGAATCTTAAATGTAAGGGTTCACAATCT----------
---------------------GGCCCATTTAAATAGGAGGAGGGAATTATCGGTCTTGCCTTCAAATTTAGGTCGTGCTT
TCGAAATTTTGACATGCTTTTATTGCATATTTTATTAATTTTGGATTTTTATTTTTCTTGCAGGTTATGATGAGTGCCGG
TACGTGTACATGTGATTGGACCGGAGCTCCTCCGAGAAGTGCAAATGATTTCCAAGA-----------------------
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>chr7A_1
GAGCAGTATATATCGCACACGGTAACTAATTAATCCAGTCAAGCTCTTTTGCAAAAGTAATGT-----------------
----------ACTGTAAAAGATCTCCACAAAGTA-TTACATGATGCAAACATGACACATACATACAGTGCGCTCGCGCTT
CCCGGGGTCGAACTTTGACCATAAATTTAACGAACGAGACCGACTGCGGCGGGAGAAAAAGTTACATAATTAAAAACTTC
TTTCGAATATGAATTCACCAATATAACTTTTGCTCCCGCCGCAATCGGTCTTGATAGTTAAATTTACGATTAAAGTTGAA
GCACGGGGATAGAGGAAGCACTACATTGTGGAATGGAGGGAGTAATGTCTGAGCTAA---------------ATTTCCCA
TCTCGTGGTGTTGTCAGCTCGCTATGATTGAC--AAGACACGGCTTTTCTCTAGCCCTAGCTACCTACTAGTAGTA----
--TAATATGGATGCATTCATACATGACAAATCAAACAAAATGGAGTAGCAGGCTTGAGGCCTTGAGTGGAACCAAAGCAA
CGGAAGAAAAACACTAAAAAAAATACACCTGCTGTTCTGCCCTTTATTTTCTTTCCATTTTGTTCCCTGCATTTCTCTCT
GGCCAAGCAAGCACATGATGCCCAAACTGCAGCTAGAGAAAAGAAGCAAACATGCATGACCCTTGAGTTGAAATGTTTTC
ATAGAATATTTGTAGCATTTTAATCCATTATATCATTTTATGGATACCTGGGGTCAAAGAAAATGAATCAAAACTCCTTC
ATGCATGGCATTGCATGAAACTTCCGTCTCTTCGAA--TTTCAGCAAATTTCCGTCAAATATCCAAAGAATCCATAATTA
GTCATGGCTACAAATTGCTATGTTCCCATGACTACAAATT-----------------------CAAATGCTTTAGTTTCT
GGATTCAGGAAGTCAAGACATCTCTAAACTTCTATTTTATTTTTATGTTTACTGAAACTTAACTGGGAAGGCTCTTAGGT
TTAATTAACATATCAGTCCATGCAACTTTATGAAAAGAGACT----------------AGCTAGCATCCATCTGGTGAAT
TCTTGCTGCTGCCTCCCCTTTATCTGCCCACTTGAGACTTGGGCACTACGTACTCCCCATATTCCTTTCTAGCACTACAA
CAATCTCATTCCCACGCATCATGTATAAATGCAATTTGCCTCATGTCTTGATCACAAACCGTGGAGCTAATGATGATCAA
GAAGGACCACCTGGTCCTCGTAGCTCTCCTCGTGTCCATTCAACATGGTAATTGCTGGGAGCATCCCTACG-TAAAAGAC
TTTCACTACACGTGCACATACATTATTTACTTTGTCATCTTGAAGTTCCT-----ACCCTTGTGATCTTGTAT-------
-------------------------------------------------ATTGTCTGCCGTTTGACTTTT-GTTTGCATG
GACGCGAAA-------------CAGATTGGGCGAATGGCGCCTCAAGAACAAGAGAATGGCGCAACCTTGTCAACTCGCC
GGCATTGCCACCATACCAAGACTTGGTAGGAGGAGCCGGGCCTCCAACCCCCGCACACGACATCCAGCCATCGCCGCCGT
ATTGCGCGTACCCTCCCCCTGCCAACCCCACCTCGCCGGCGGCGCCGTCGATGCCCCCTCCAGCCGGTGTGCTGCCACCG
TCCACGGCACCGGTCGGCAACCCCACCCCACCAGCCAACGCACCGGCGAGCCCCCGCGTGGCCCCACCGGCTGGTGCTCC
CCGGGCGGGAGGCCCGGCAGCCATCGGTGCGCCGCAGGGGCTGTGGTGTGTGGCGAACCCGACGGTGGAGAGCGTGGACG
TGCAGGCGGCGATGGACTACGCGTGCGGGTCGGGCACCGACTGCGGCATGGCGGCGCCCGGCGGGCCGTGCTACCTGCCA
GACACGCTGATGGCGCTTGCTTCCTTCGCCTTCAACAGCTACTGGCAGCGCAACAAGGCCGCCGGCGGCACCTGCGACTT
CGCCGGCTCCGCCATGCTCATCACCAAAGACCCCAGTAAGTCACGATCTGCAA---------------------------
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>SNPs
-----S----------------S----------------------------------------SSS--------------
------------S---------------------S---------------------------------------------
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---------------------------------------------------------SSSSSSSSSSSSSSS--------
-S--------------------------------------------------------------------------SSSS
SS--------------------------------------------------S---------------------------
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---------------------------------S---S-S---S-----------------------S-----SS-----
---SS---------------SSSS-S-SS-S-SSS-SS-----------------S------S-----------------
----------------------------------------SSSSSSSSSSSSSSSSSSSSSSS---S-------------
-S----------S--S--------S---S---S--------S------------S-------------------------
-----S--------------------------S-------------SSSS----S-------------------------
-----------------------S-------------------------------------------------S------
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------S---------------------------------------------------------------S---------
-------S--------------------S------------S------SSSSSSS-------------------------
---------------S------SSSSSSSSSSSSSSSSSSSS----------------------------S--S------
---SSSSS-----S------------------------------S--------------------S-----------S--
-------------------------------------S----S-----------------------------S--S----
----S-----------------------------------------------S---------------------------
--------------------------------------------S----------------S------------------
----------------S----------S----------------------------------------------------
----------------------------------------------------S-----------------------S---
--------------------S-----------------------------------------------------------
----------------------------------------S---S----SS-SSS-SSSSSSSSS---------------
--SS---SS-SS-SS---SSS--S-SSSS-SS-SSS-SSSSSSSSS-S------S-SSS-SSS-S--SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS--------S-----S--S---S--------S---SSS-S---S-----S---S------
--S------------SS-----S--S--S---------S-----S----S--S--SSS---------S------------
------------------S-S-----------SS----S--S-SSS-----------SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_985
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-----CAGGAAGCCAGGACATCTCC-------------------------------------------------------
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>reverse_2522
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-----------------------------------------TGGACCCATGGAATGTCACG-------------------
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