>input_sequence_59219
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------GTATATATTCATGTCCTCTGCATATCCTATTCCTT
CACAACGCAAAGCATACAAACCCCAAAGTGTCTTCCTTTTCTTATATATGATATATCCCGATGGCAAAATCTTCACAGAT
GTTTGTCACCCTCATGTGCCTTCTGCTTCTGTACACCAGCCTTCATGTCCATGGTATGTTTATTATATTGAGGTCAATCT
TACCATTCCATATGAATCTTGTGATAGATAAACTAACATGTTTGCATAAATAATCAAATTGGGTCTTGTTGTATTCATCC
ATCAGTTTAGGAGTTTTTGTCTATACAATTAAG-----------------------------------------------
----------------------------------------------------------------------TCGACTTCTC
CTGTTATACACAA--AAAGAGATGCTAGCAAGATGATGTAGTTTGCACAGATAGTTTGTGAGGTCAATTTTCACCCAGAA
GTGATATACTC-CTCCGTCCCATAATGTAGGTAGTGTCAAAAAACGTCTTACATTATGAGACGAAGGGAGAACTAATTAT
GTATGCTA--TACATGACAAACAGGAGAAGTGGACACCAGTATCAGAACAAGCAGCATCCTAGTACAGCCAGCAAGGAGG
GTTTTGCAAGCTACGTATGTACCTCAGACAACTATAACAAGACAGTGCAACATATGCCACTGCAGCGATGATGGTGATAA
AACTTGGTATGTAACAACATGCTGCTCTGAGGCAATTTGCAATGATCCAGCCGAGCCATCTGGCACTTGTACTTCTCGCA
GAATCTCATGCGGCGGTTGTGATGAAAAAACCTACAAGTAGTATAGGCTGCTAATGAAAGATGGATGGCA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GTTTTTCTATATCGAGTTAAATTACAAAGGTTGCCTTGTGTCATCTGGATATTGTAAAGAGAAAT
GAATAAGAATAAGCAAG-------------------------------------------------------AATTGAGT
ATGACAAGCTATTGTTAATTGCTGC-------------------------------------------------------
------------------------------CTCTATTATTACTTTAAAAATATAATTTGTATTACTTCCACATTGTTCCC
GATGTCTTCGTAACCCTACTAGTGGTG-----------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------ATTTTTT-GTATACT
TTATTTATGT-----------------------------------------------------------TCTTTTTGCCC
CTTCTTTCCAT---------------------------------------------------------------------
---------------------------------------------------------------------------AAAAA
CAATAACAAAGCCTTTTGTCCCAACAAGTTTTGCTCGAAACGGAGGCATGAGCTTTGCCTCATCTTAAGGAGGGAAGTTT
TTGTTACAAAGACAAACTTATA----ACCGGAAGTGCTACTCTCCCAAGA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>chr3B_1_TraesCS3B01G100900
CCTTCTACCATGGTGTTGAATTGTAGCGGTCATGCCACAGATGCCCAATAGGATGCCTTGTCATTGTCAACACACTCAAT
TTATTTGTTGTCGTCAAGGAATTCTTGCGATAGACAAGCTGATTAACATGTTGGGTCCAGGTCTTCATTTCGTCTTGTTT
CTTTATGTTCTTTCCACAGTGCTAATGAGCAATGTGAGGTACTATCTTTAGCCGCTCGAAGGATGATAAATATCAACAAT
ATTAAAATTAATGTTACTATATTCTTATAAAAATATGGCCGCATGCATCTTGCAAATGCAGAGGCCGGGGGTCATCCTCC
TTTTCTAATAAAAATATTCTTATAAAAAATTGAGATATATAATTATTTTAATTTAAAACATAAGATTTTGAAATAAAATT
ATGGCAAAAACATTGATTTCGAGAATATCGTAAAGTACTTAGTCCAATGAACATGAAGTATAGAACGGGAGGACACAATT
GGATGAACACAACCTCCGAGCACTATTTGTATTTCCCTATCTTTATGTAGAACAATGAAGATAGAGATTTCCTAAAGGAG
TTGTCGATTGTCCAGCTGTTTTTGGCGAGTGACTCAATATGCACTGGAAACAATAAATTCTAGCAGAACATTTTAGAAGA
CAACAATTTGATGTTTAAGCAGTATTGGAAAGAATTACTTAATTCAATATTTGCATAAAAATGATATTTAAGTGTAGTAA
TACTTGCACAAAAACAACAAATCTGTAATTTAGGCAGTTCTTAAAAAAAAGGTATATGCAATA-TGTGTATTCCTGGCAT
TCTAATTAGATGAGGGTAAATTTGTGATTTTTT-TATTCTTTGTTTACTTATTTGTTATAAATGCATTAAAATTACATTC
AAGACAAATATATTCGAGAGTGTATTAATGACACACAATGTA--AATTAATCTACAGAATAAATGTGTTCCTTTCTTTTT
CTTAAACAATAGA-TGGGTGCCTTTTTGTACTATATCATTTATGTGTATATATTCATGTCCTCTGCATATCCTATTCCTT
CACAACGCAAAGCATACAAACCCCAAAGTGTCTTCCTTTTCTTATATATGATATATCCCGATGGCAAAATCTTCACAGAT
GTTTGTCACCCTCATGTGCCTTCTGCTTCTGTACACCAGCCTTCATGTCCATGGTATGTTTATTATATTGAGGTCAATCT
TACCATTCCATATGAATCTTGTGATAGATAAACTAACATGTTTGCATAAATAATCAAATTGGGTCTTGTTGTATTCATCC
ATCAGTTTAGGAGTTTTTGTCTATACAATTAAG-----------------------------------------------
----------------------------------------------------------------------TCGACTTCTC
CTGTTATACACAA--AAAGAGATGCTAGCAAGATGATGTAGTTTGCACAGATAGTTTGTGAGGTCAATTTTCACCCAGAA
GTGATATACTC-CTCCGTCCCATAATGTAGGTAGTGTCAAAAAACGTCTTACATTATGAGACGAAGGGAGAACTAATTAT
GTATGCTA--TACATGACAAACAGGAGAAGTGGACACCAGTATCAGAACAAGCAGCATCCTAGTACAGCCAGCAAGGAGG
GTTTTGCAAGCTACGTATGTACCTCAGACAACTATAACAAGACAGTGCAACATATGCCACTGCAGCGATGATGGTGATAA
AACTTGGTATGTAACAACATGCTGCTCTGAGGCAATTTGCAATGATCCAGCCGAGCCATCTGGCACTTGTACTTCTCGCA
GAATCTCATGCGGCGGTTGTGATGAAAAAACCTACAAGTAGTATAGGCTGCTAATGAAAGATGGATGGCA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GTTTTTCTATATCGAGTTAAATTACAAAGGTTGCCTTGTGTCATCTGGATATTGTAAAGAGAAAT
GAATAAGAATAAGCAAG-------------------------------------------------------AATTGAGT
ATGACAAGCTATTGTTAATTGCTGC-------------------------------------------------------
------------------------------CTCTATTATTACTTTAAAAATATAATTTGTATTACTTCCACATTGTTCCC
GATGTCTTCGTAACCCTACTAGTGGTG-----------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------ATTTTTT-GTATACT
TTATTTATGT-----------------------------------------------------------TCTTTTTGCCC
CTTCTTTCCAT---------------------------------------------------------------------
---------------------------------------------------------------------------AAAAA
CAATAACAAAGCCTTTTGTCCCAACAAGTTTTGCTCGAAACGGAGGCATGAGCTTTGCCTCATCTTAAGGAGGGAAGTTT
TTGTTACAAAGACAAACTTATA----ACCGGAAGTGCTACTCTCCCAAGATTAAACTTTAACTTTTTGGCAC--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------CCATTGTGGCACAAAGCATG
GCCTCATCATTAATTAAGCTTAAAAGGTTTGGTGGCAGAGCGCTCCTGTGATGGAGGATGCATACAATTTTCAAACCATA
AT------------------------------------------------------------------------------
-------------------------------------TACTTATATTTATTAATGAGTGAATTGGCACAAGCTCCTACAA
ATTTTGCAACCCCCCTCGGGTCCTTTTTACTCGACATATATGATTTGTCTGAAGTCAAACTCCGTAAAGTTTGACATTAT
TTGT----------------------------------------------------------------------------
------------------------------------------------------------------------------AT
GAAAAAAATATCAACGTCTATAATACTAAAATTATGCA---------TTATGAAAATTAAATTCATGATGAATCAAATTA
TATTGGTT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TCGTATTATGAATGTTGTTATTTTTTTCAATAAAGTTGGTCAAACTTTACTAAATTTGACTTTAGA
CAAAATTTATATGTGGAGTAAAATGGACCAGAGGGAGTATATATACTCCAATAAATTTCCTTTAATTAACAAA----ATT
AATTACTTATTTGGTGGATTTAACCTATTACT--------ACTCATAGTTCCTAGCACTAAATAACAAGGATTCGAGGAA
AGCATTAAAATTTCATTCAAGACACGAATATTTTAGGCAATATTAGTGACATGGAATAAACTAAATTAATAATGGATTAA
ATTTGTGCC----TTTTTTGCATAAACAATAAATGGAAACATTATCGCACTACTAATTTATCATGTATGTGTACATATTC
ACATTCTCTATACTCGCTCAGTCCCTAAATTTAAATCTTTTTAGAGACTTCAATATAGACTACATACAGATGTACATAGA
TGTAGTTTAGAGAGTAGATTCACTTACTTTGCTCCGTATGTAGTCCATATTAGAATCCCTACAAAGACTTATATTTGTGA
ACAGAGGGAGTACTATATCCTAGCCATTCACCGCGCAAAACATACAAGCTT-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TAATTAAGCTTAGAAGGTTTGGTGGAGGAGCACTCATGTGATGGAAGATGCAGAAAATTTTCAAAATG
ATAAGTACTTACATTAACT
>chr3A_1
CCTTCTACCAAGGTGTTGAATTGTAGCGGTCATGCCACGGATGCCCAAAAGGATGCCTTGTCATTGTCAACGCACTCAAT
TTATTTGTTGATGTCAAGGAATCCTTGCGATAGGCAAGCTGATTAGCATGTTGGGTCTAGGTCTCCATTTCGTCTTGTTT
CTTTATGTTCATTTCACAGCGCTAATGAGGAACGTGAGGTACTATCTTTAGCCGCTTGAAGGATGATCAATATCAACAAT
ATTAAAATTAATATTACTATATTCTTATAAAAATATGGCCGCATACATTTTCCAGATGCAGAGGCCGGGGGTCATCCTCC
TTTTCTAA-AAAAATATTCTTATAAAAAATTGACATGTATAATTATTTTAATTTAAAACATAACATTTTGAAATAAAATT
ATGGCCAAAATGTTGATTTGGAGGATATCCTAAAGTACTTAATCCAATGAACGGGAAGTATAGAACAGGAGGACACAATT
GGATGAACACAACCTCCGAGGACTATTGGTATTTCCCCATCTTTATGTAGAACAATGAAGATAGAGATTTCCTAAATGAG
TTGTCAATCGTCCAGCTGTTTTTGGCGAGTGAATCAACATGCACTAGAAACAATAAATTCTAGCAAAACATTTTAGAAGA
CAACAATTTGATGTTTAAGCAGTATTGGAAAGAATTACTTAATTCAATATTTGCATAAAAATGATATTTAAGTGTAGTAA
TACTTGCACAAAAACAACAAATCTATAATTTAAGTAGTTCTGAAAAAGAAGGTATATGCAATAGTGTGTATTCCTATCAT
TCTAATTAGATGAGGGTAAATTTTTAATTTTGTATATTCTTTGTTTACTTATTTGTTATAAAAGCATTAAAATTACATTC
AAGACAAATATATCCGAGAGACTATTAATGACACATAATGTA--AATTAATCTACAGAATAAATGTGTTCCTTTTTGG--
CTTAAACAATAGA-TGGGTGCCTTCTTGTACTATATCATGTATGTGTATATATTCATGTCCTCTACATATCCTATCCATT
CACAACACAAAACATACAAACCCCAAAGTGCCTTCCTTTTCTTATATATGATATATCCCGATGGCAAAATCTTCACAGAT
GTTTGTCACCCTCATGTGCCTTCTGCTGCTGTACACCAGCCTTCATGTCCATGGTATGTTTATTATATTGAGGTCAATCT
TACCATTCCATATGAATCTTGTGATAGATAAACTAACATGTTTGCATAAATAATCAAATTGGGTCTTGTTGTATTCATCC
ATCAGTTTAGGAGTTTTTGTCTAGACAATTAAG-----------------------------------------------
----------------------------------------------------------------------TCAACTTCTC
CTGTTGTACACAA--AAAGAGAAGCCAGCAAGATGATGTAGTTTGCACAGATAGTTTGTGAGGTCAATTTTCACCCAGAA
GTGATATACTCGCTCCATCGCATAATGTAGGTAGTGTCAGAAAATGTTTTACATTATGAGACAAAGGGAGAACTAGTTAT
GTATGCTA--TACATGACAAACAAGAGAAGTGGAAACCAACAGCAGAACAAGCAGCATCCCAGTACAACCAGCAAGGAGG
GTTTTGCAAGCTACTTATGTACCCCAGACAACCGTAACAAGACAGTGCAACATATGCCACTGCAGCCATGATGGTGATAA
AACTTGGTATGTAACAACATGCTGCTCTGAGGCAATTTGCAACGATCCAGCTGTGCCATCTGGCACTTGTACTTCTCGCA
GAATCTCATGCGGCGGTTGTGATGAAAATACCTGCAAGTAGTATTGGCTGCTAATGAAAGATGGGTGGCA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GTTTTTCTATATCGAGTTAAGTTACAAAGGCCGCCTTGTGTCGTTTGGATATTGGAATGAAAAAC
GAATAAGAATAAGCAAC-------------------------------------------------------AATTGAAT
ATGCCGAGCTATCGTTAATTGTTGC-------------------------------------------------------
------------------------------CTCTGTTATTACTTTAAAAATATAACTTGTATTACTTCCACATTGTGCCC
GATGTCTTCGTAACCCTACTAGTGGTG-----------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------ATTTTTTTGTATACT
TTATTTCTGT-----------------------------------------------------------TCTTTTTGCCT
CTTCTTTACATC--------------------------------------------------------------------
----------------------------------------------------------------------------AAAA
CAATAATAAAGTCTTTTGTCCCAACAAGTTTTGTTCAAAACGGAGGCATGGGCTTTGCCTCATCATAAGGAGGGCAGTTT
TTGTTACCAAGACAAACTTATATATAACCGGAAGTGTTAATCTACCAAGATTAAACTTTAACATTTTGGCAC--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------CCATTTTGGCC--------G
GCCTCATCTTTAATTAATCTTAAAAGGTTTGGTGGCCGAGCGCTCCTGTGATGGAGGATGCAGACAATGTTCAAAACATA
AG------------------------------------------------------------------------------
--------------------------------------ACTTATATTAATTAACGGGTGAATTGGCACAAGCTCCTACCA
ATTTTGCAACCCCCCTCGGGTCATTTTTACTCGACATATATAATTTGTCTAAAGACAAACTCCATAAAGTTTGACCATAT
TTGTA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
TGAAAAAATATCAACATCTATAATACTAAAATTATACA---------TTATGGAAATTAAATTCATGATGCATCTAATTA
TATTGGTT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TCGTATTATGAATTTTGTTATTTTTT-CAATAAAGTTGGTCAAACTTTACTAAATTTGACTTTAGA
CAAAACTAATATGCGGAGTAGAATGGACAGGAGGGAGTATATATACTCCAATAAATTTCCCTTAA-----AAA----AAT
AATTACTTATTTGGTGGACTTAACCTATTACT--------ACTCGTAGATCCTAGCACTAAATAGCAAGGATTCGAGGAA
AGCATTAAAATTACATTCAAGACACAAATATTTTAGGAAATATTAATGACATGCAATAAACTAAATTAATAATAGATTAA
ATTTGTGCC----TTTT--GCGTAAACAATAAATGGAAACATTATTGCACTACTAATTTATCATGTATGTGTACATATTC
CCATTCTTTATACTCCCTCGGTCCCTAAATATAAGTCTTTTTAGAGACTTCAATATAGACTACATGCAGATGTACATAGA
CATAGTTTAAAGAGTAGATTCACTTATTTTGCTCCGTATGTAGTCCATATTAGAATCCCTTCAAAGACTTATATTTAGGA
ATGAAGGGAGTAGTATATCCTAGCCATTCGCCGCACAAAACATATAAGCTT-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TAATTAAGCTTAGAAGGTTTGGTGGAGGAGC--TCATGTGATGGAAGATGCAGACAAGTTTCAAAATG
ATAAGTACTTACATTAA--
>chr3D_861
TGTATTAAAC----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TTACATGC
AAGACACAGATACCTGAGGGAGTATTAATGGCAGGCAATAACATAAATTTTCCATTCAATAAATGCATATCTTTTTCG--
GTGCAAACAACAACTGGCTGCCATCTTGCGCCATATCATGTATGTGTATATATTCCCATTCTCTATACCT--TAGCCATT
CACAACACAAAACACACAAACCCCAAAGTGAATTCTTCTTCTTTCTTATAACATATACTGATGGCAAAATCTTCGCAGAT
GTTTGTCACCCTCATGTGCCTTCTGCTTCTGTGCACCAGTGATCAAGTGCATGGTATGTTTATCCTATTCATACCAATCT
TACCATTCCATATAAATCTTGTG---GATAAACTGATTTGTTTGCATAAATAATCAAATTGGGTGCTGTCGTATTGATCA
ATCAGTTTAGGTGTTTTTGACTTAATAGTACATATTTCTTAGTTTGTTTGATGAGTTCTTAGTTTGTTCCTCAGGGTTGT
GTTTTGTGGTGTGTTTGGGTCAGAGTAATACGCAGCTCTCCTGCGTGTTTGAGAAAAAAAATAATGAAGTTCGCGTTCTC
CTGCTATATACGTTCAAAGAGATGTCAGCGAGATGATATAGTGTGCACACTTAGTTTATCAGGTTAATTTTCACCCAGAA
GAAATATA-------------------------------------------------------------------ATTAT
GTATGTATGCTATATGATGAACAGGAGGAGCGGGCGCCAACATCAGTACACGCAACATCCCAGTACAGCCAGCAAGAAGG
GTTCTACCAGCAACATATTTTCCTTAGACAACCGTATCAAGACAGTGCGACCTATGCCACTGCAGCCATGATAATGATAC
AACTTATTATGCAACAATATGCTGCAATAAGATAACTTGCAATGATCCAGCGGAGCCCAAAGGCACTTGTCTTGTTGACA
AAGTCTCAT---GCGGCTGTGACGTGAGTACATGCAAGTAGTACATGCTGCTGAAAGTTTTTTGTGTGTGTTTTTCTTCA
ATAAATGGGGCATTGGTGCCAAAACATGCTTGACTCATCTATGGCATTGCTCATTGTGTCTGTGTGCAATCTGAATCTTC
TGTTTTGCTTTTGGGTGAAATTTGGCGAAACTGAAAACGGTTACCAGCTGACCAAGTCATCAGTTTCGGAAACTACAGAA
GTGACTTTGGTTGTGATTCCTGGAATTGTCAAGGAATCCCTGCGCCAGCAAGCTGATTTATATGTTGGGTGAACCACTCC
ATCCAATATACTCCTGTTTTTCTATGTGCTTGCTTTAACGGTGTTAATGTGCAACCTGGTATATATCTTTTGCCGCTTGA
AGGAAGAGCAATATTGACAGTATTAAATTGTACAACTATATTCTTATGGAATATATTTTCATATGTATAATTATTTTAAT
TTGAAAAGGAATTTTTAATACAAATCATAAGTATAGAACAGGAAGACTGAATTGAATCAACACAATATCGGAGGTCTAGT
GGGGAAATGCATTGGGGCACCAAGAAATATCTGAAATATTTAAAAAAAAACTTAATTTTTGGGATATGAAACCTGAGTGC
CTATTGTACGCCCATGTTCATTTTCGCGTGGATGGGTGCCTGTGGTATCCGTGGCGCTGGAACTACGATACGACATAAGA
TACATCTATTTTTTTCTATACATACGATTTTTCCTTTTTTACTGACATTACCACAGGTAGCCCTTCCCCACGAAACTGAA
CGGGTGTACAACAGGCACCCATGTTTAATATCCCAAAATTTCATTTTTTTTTGAAAACTCCTAATATTTTTT-AAATACT
GTATTCATATAGGTCTGTGTGTCATCCAAGAGCTACAAATCCTCTTCCAGGTCTATTGGTCTTTTCTTTTCTTTTTCTTT
CTTTTTTAATAAAGGGAGCACTGGTGACAAAACATGGTTGACTCTTATATGGCCTTGGTCATTGTGTCCATGTGCAATCT
GAATCTTCTGTTTGTTTTTTGGGTAAAATTTGGGGAAACTGAAAACAATGAACGGCTGACCAAGTCATCAGCTTCAGAAA
TTACAGCAATGACTTTGGTTGCAATTTCTGGAAAACTGTACGTATCTGCAAAAAAGAAAGAAAGAAGGAAAATAAAATCT
CGGACGGATCCCTTTTCCTTGGCTGAAGAGCATCATGGCGGAAACTAGTCAAAACATGGTTGAAACCAATTCAGAGTTAA
TTCTTGTCCGGTTTTGCAAGTTCGAGGTTGTAAAATAGTCAGTTTTGGGTTGTATCTTAGACTTTGGTGGCAATTCGGGC
CCTCTTCGGGTTCACTCCGCTCCGTAGCTCTGCCCTTCGAGCGGGCGGAGTGACGCTGAACGCTGCAGCTCCTCGGAGTA
GGATGAGTGGAGCGGAGCTGGATTTAGGGCCTGTTCGGAGTCTCACCGCTCCAGAACTCCACTCCCGTTGCGGGGTAGCT
TCAACTGAAAATAGATGAGCGGGAAAACACCAGCTCCGCAGATCCTCGTATTTCTTGAAGCCGGCGGACTACCGAACAGG
GCCTTAGTTTAATCCGGCGGAGTGGCTAATTCCTAGCTCCGCGGGGGACTCCCTGTGACCTCCCGCCCGATCCAAATCAA
TCTCTCTCTCTCTCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCT
CTCTCTCTCACTCCCGCAGTGACTCCCTGGCCATTGAACCCACTAGCGACGCTCCCTGCACCCTTTTGGCC--------G
GAACCACCCACTAGCGATGTTCCCCGCACCCTTCTGGAGTGGAGTCAGTTGCCAAACGTGTTATCAACTCCCCATTTGGC
GGAAGGAGCCATCAGTCCAGGAGTGGGGAGTGGAGTCAAGGATCTGAAGGAGTGGAGGGGATCCGAACACACTCTCTTGG
TTGTAATATGTACTCCTCTCTTACTTTTCTTTGCATGTATTCTTATGTCTTGATGAGTGCTACCCAATTTGAGTCCCACA
ACCTCTTGGAATCTGTGACCTCACCGTAGCCTGGGATTGTGGTGAACGGCCCTAGTCATGCTATGGATGACCAATGGGAT
GCATTGTCAATGCACTCAATCTACTTGTTGTCACTGTCAAGGAATCCCTGCGCTAGCAAGCTGATTTATATGTTGGGTGA
ACACTCCATCCCGTCCTGTTTTTCTATGTGCGTGATTAAATGGTGTTAATGTACAACCTGATATACTATCTTTTGCCGAT
TGAAGGATGACCAATATTGACAATATTAAACTTGTACTACTATATTCTTATGGAAAATCATTTTTAGTACAAATCACAAG
TATAGAACAGGAGGACGGAATTGGATGAATACAACATCGGAGGTCTAGTGGCCTTTTCTTATCTATATGTAGAACAATAG
AAGATATGGTTTCCTAAATGAATTGTCCAACGCCCAGCTGTTTTCCGTGAATGATTCAACATGCAATGGTAACAAAAGAA
ATTGGAAAGTTTTCGATCATCAACGAATAGAAGGCAATACTGTTAGCATGGTCAATCAGTACATCCAGAAAATTATACAA
ATCTGTAATTTAAGTAGTTTTGGAATTCTTCATTTTTATCTAAATATAGTTATATGATTTCTAGGCACCGCTACACCTTA
TTTTTT-------------------------------------------------TTTACTTTCCTTAATTGC----ATT
AATCTGT-------------------------------------------------------------------------
---ATTAAACTTACATTAAAGACACAGATACCTGAGGGAGTATTAATGGCAGGGAATAAAATAAATTAATCCATTCAATA
AATGCATATCTTTTTTG--GCGCAAACAATAATTGGCTGCCATCTTGCAC------CTTGTCATGTATGTGTATATATTC
CCATTCTCTATA--------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------TCTTGGCCATTCACAATACAAACACACAAACCGGAAAGTGAATTCTTTTCTTATAAGATATAC
TGATGGCAAAATCTTCGCAGATGTTTGTCACCGTCATGTGCCTTCTGCTTCTGTGCACCAGCGATCAAGTCCATGGTATG
TTTATCATATTCATACCAATCTTACCATTCCATATAAATCTTATGGATAAACTGATTTGCATAAATAATCAAATTGGGTC
TTGTTGTATTGGTCAATCAGTTTAGGTGTTTTTG----------------------------------------------
-------------------
>chr4D_2356
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TATAAGATTTGTCTTAAGTCAAACTCCGTAAAGTTTGACCATGT
TTGTA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
TGAAAAAATGTTGACATCTATAATACTAAAGTTATACA---------TTATGAAAATTAAATTCATGACGCATCTAATTA
TATTGGTT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TCGTACTATGAATGTTGTTATTTTTG-CAATAAAGTTGGTCAAACTTTACTAACATTGACTTTAGA
CAAAACTTATATGCAGAGTAAAATGGACCGGAGGGAGTATATATACTCCAATAAATTTCCCTCAGTTAACCAAAATTAAA
AATTACTATTTTGGCCGATTTAACTTATTACACCAAATCAACTCGTAGATCCTAGCACTAAAAAACAAGGATTTGATGAA
AGCATTAAAATTACATTCAAGACACGAATATTTGAGGCAGTATTAAAGCCATGCAATAAACTAAAT--------------
----------------------------------GGAAATTTTGTTGCATTACTAACTTATCATGTATGTGTACATATTC
CCATTCTCTAT---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------AGTAGTATATCCTAGCCATTCACCGCACAAAACATACAAGCTT-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------TAATTAAGCTTAGGAGGTTTGGTGGGGGAGCACTCCTGTGATGGAAGATGCAGACAATTTTCAAAACG
ATAAGTACTTA--------
>SNPs
----------S---------------------------S---------S----------------------S--------
----------SS----------S----------S-----------S-----------S------S---------------
----------S--S-----S---------S--S-----------------------S----------S------------
------------S-------------------------------S---S--S--S-------------------------
--------S------------------------S--S--------------------------S----------------
-----S----SS-------S---S-----S-----------S----------SS------------S-------------
--------------------S------S---------S--------------------------------------S---
-----S--S-----------------------S----S-------S-------------------S--------------
--------------------------------------------------------------------------------
------------------------S-------S-S------S-----S---------------------------SS---
-----------------------S-S-----S------------------------------S-----------------
-------------S------S-----------------------------------------------------S-SSSS
------------------------S--------------S------------------------S----------S-S--
------S----S------------------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
----------------S--S-------------------S----S--S--------------S-----------------
---------------------------------------SS-------------------S-------------------
--------------S-----------------SS--------------------------------S-------------
---------------------------------------------------S----------------------------
----------------------------S----S------------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S---------SS----------S-S------------S--S---S
----------------S-------------------------------------------------------------S-
---------------------S----------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S---------------------S--S---------------------------S---------------
------------------------------------S--S---S------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S----SSSSSSSSS-
--------S--------S------------------S-------------------------S------------S----
-S------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
----------------------S---------------------------S------------------------SS---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
SS-------------S-------------------S--------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S---------------S--------------------------------------------------
--------------------------------------------S---S-------------------------------
------------S--------------------------------S---------------------------S------
-----------------SS--S-----------------------S----------------------------------
S--------------S---S----------S---S------------------------------S--------------
SS-------S----------------S---------------------------------S---------------SS--
-SSS--------S---------------------S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
-----------------SS
>forward_49
-----------------------------TCATGCCACAGATGCCCAAT-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>reverse_1661
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------TAGTACAGCCAGCAAGGAGG
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>forward_593
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------AGCTGTTTTTGGCGAGTGAC-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>reverse_3103
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TTTTTGGCACCCATTGTG
GC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
