>input_sequence_59213
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----------------ATGGGTTGTGTCATGTCCAGCTCCTCCACCCCAACTCCCTCCGCCACCGCCGCTGCCGCCGTCA
AGCCTCAGACCGTCTCACCCAGGTCAGGCTCGCATGTTCTACTTCTATACATCAACGTGTACCCGACATACCAAGGGCTC
GGC-AACGGCAAGTGCGTCAAATCGGAGACCTTCCTCGCCGGAGGCCGCCGCTGGTACGTCGAGTTCTACCCCGACGGCC
AGGGCCCGCAGGACGCCGGCTGGATATCCGTCTTCCTCTTCCTCGTCCCGGCCGGCGCCTTCGAGGTCGTCACGACGCAG
GTCAAGATCAGCCTACTCGACGCGCACGGGAAGCCGGTGCCGTCCTACGGCCGCAGAGGTGGGTGGAGGTGCTGCACCTT
CTCCAGCAATGAAGGGCCGTGGGGTTACTCTCGGTTCATCACCAGGGCTGATCTGGAGAGATTAGGTCACGTGTCATGGG
AGAACGGTGGTTTCAGTGTCCAATTCGACATCATTGTGTCCAAGGAGATTTCCACTGAGTACGTTCCTGGACGGAACCAT
GATCGCATGCTAGTGCCGCCGTCGGATATCCTCCATGATCTCGGTCAGCTCCTCTCCTCCGGTGAAGGGGCGGATGTCAT
GTTCGAGGTCGGCGGTGAGATGTTCGCCGCACACAGGTGTGTCCTTGGTGCTCGTTCCTCTGTCTTCAGGGCGCAGCTTC
TGGGTCCAATGAAGGAGAGCACATCAATGTGCGTGCAGATAGAGGACATGGAGCCAAAAGTATTCCAGGCATTGCTTCAT
TTTATCTACACCGATTCGGTGCCCGATGTCGACGATGCCGATGCACTAGGGATGATCCAGCATTTGCTTGTTGCCGCGGA
CAGGTACGGCCTCAAGAGACTGAAGTTGACCTGCGAAGAGAAACTATGCGGTTACATCAACACTAGCACAGTTGCCACTA
CACTGGCACTCGCCGAGCAACATGCTTGTCCTGCACTCAAGGAGGAATGCTTCAGATTCCTCGAGTCCTGTAACAATAGC
ATGCTGGATCTGATCACACGGAGTTCTGACTTTGAGCATCTAGCAAGAAGTTGCCCGTCTATTATGAAGGAGCTTATTCC
CAAACTTGCTCGCAAACCCCCTTGTGTAATAAAATATAGCAACATGTAA-------------------------------
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>chr3A_1_TraesCS3A01G020100
GGCGGCAAATATCCATCGGGGAAATTACGTCGGCCAAGGCACCGACTTAATGTCGTATGGTCGGGCCGCTCCCTGCGCTG
AGTAGAAGGAGCTTAACTAGTGGGTCTTCCCGGTGTCACGGTTGTATATTTCTGCGACCCAAGTGCCCCACTGGAGTTGC
CGCACGCTGTGGTATCTCGGCACCTACGGCAGGGGCAGTGCGATCTCAGGGGATGCCGCTGGAGGAGGAGCTGCCACTGA
TGCAAGAGGAGGAGGCAGAGCTGCAGCGTTGATCTGCGGGCAACGCGTTGTGGATCATAGGTGGGGAGCGGCGGCGGCCT
CCGGTTCCACCCATGTCGCCCGCGGGGTGAATGGATGGGCGGCGGGTTGCGGCCGAGGCGTGGATTCGGTGGCGGCGGCG
GAGAATTGAGTGGCGCCTAGAAGGGAGAGAGAAGGGAGAAGTTTTATTCCTCGGCCGAGCGAGCGAGTATATTTGATCCT
CGTTTGTCGCTCGGAGTAGAATTTATAGTCCTCTATGGGTTTTAGGAGATCGGCTAAGTCCAATTTAAAAGAGTAAACTA
GAATTTTTATTTCTCTAATCGGATCTAGGTGATCGGCTAGAGATGCCCTTAGCTTACGGAGGGGTTTGTCAGGAGCAAAG
TTTCCACTTTCGAAACCAAGAAAATTTCACTCACCCTTGAATTTTTTTCAAAATTTCAGGAAAAAATTGAGCAAATTAAT
GATTTTTTAGTTTGGATAAGTCCGATTTTGAAGAATTGAATAAGCTAGTATATTTGCTGGCCACACACCAACCACGGAAG
CCCATAGACTATGACCGA----GATCCATACAGCGAGAGTAGCCATCCATGAGACCATGACCGAGATCCAGCCGTAATGG
TAACAAACTCTAACCTCTATCCTTGCGTCTCGGCTGAAATCCCAACTGCCTACCTTCCTTCTAAACTC------------
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----------------------------------------ATCAATGGAGGCCAGGCACGCATGATCTTGTGCACTCAAC
AAAATCGTTAGCCGCCATGGGTTGTGTCATGTCCAGCTCCTCCACCCCAACTCCCTCCGCCACCGCCGCTGCCGCCGTCA
AGCCTCAGACCGTCTCACCCAGGTCAGGCTCGCATGTTCTACTTCTATACATCAACGTGTACCCGACATACCAAGGGCTC
GGC-AACGGCAAGTGCGTCAAATCGGAGACCTTCCTCGCCGGAGGCCGCCGCTGGTACGTCGAGTTCTACCCCGACGGCC
AGGGCCCGCAGGACGCCGGCTGGATATCCGTCTTCCTCTTCCTCGTCCCGGCCGGCGCCTTCGAGGTCGTCACGACGCAG
GTCAAGATCAGCCTACTCGACGCGCACGGGAAGCCGGTGCCGTCCTACGGCCGCAGAGGTGGGTGGAGGTGCTGCACCTT
CTCCAGCAATGAAGGGCCGTGGGGTTACTCTCGGTTCATCACCAGGGCTGATCTGGAGAGATTAGGTCACGTGTCATGGG
AGAACGGTGGTTTCAGTGTCCAATTCGACATCATTGTGTCCAAGGAGATTTCCACTGAGTACGTTCCTGGACGGAACCAT
GATCGCATGCTAGTGCCGCCGTCGGATATCCTCCATGATCTCGGTCAGCTCCTCTCCTCCGGTGAAGGGGCGGATGTCAT
GTTCGAGGTCGGCGGTGAGATGTTCGCCGCACACAGGTGTGTCCTTGGTGCTCGTTCCTCTGTCTTCAGGGCGCAGCTTC
TGGGTCCAATGAAGGAGAGCACATCAATGTGCGTGCAGATAGAGGACATGGAGCCAAAAGTATTCCAGGCATTGCTTCAT
TTTATCTACACCGATTCGGTGCCCGATGTCGACGATGCCGATGCACTAGGGATGATCCAGCATTTGCTTGTTGCCGCGGA
CAGGTACGGCCTCAAGAGACTGAAGTTGACCTGCGAAGAGAAACTATGCGGTTACATCAACACTAGCACAGTTGCCACTA
CACTGGCACTCGCCGAGCAACATGCTTGTCCTGCACTCAAGGAGGAATGCTTCAGATTCCTCGAGTCCTGTAACAATAGC
ATGCTGGATCTGATCACACGGAGTTCTGACTTTGAGCATCTAGCAAGAAGTTGCCCGTCTATTATGAAGGAGCTTATTCC
CAAACTTGCTCGCAAACCCCCTTGTGTAATAAAATATAGCAACATGTAACTAGCTA-------------TA-TATTGAGG
AAGTTTCCAAAGTCCACATTTAGTGATCAACTGCTGTCGACGAGGATGGGCGCATGATGGCCAAAGAATGTACTGGACTG
GTAGTACTGCTATCTTTTTGCTTGGTCACGGTGCACAG-CACACCTTTTTATTTAACGTTTGAGTATTACTATGGAGTCA
TTGATTATTTGAATTATTGAATTTTACGGTGTGCTGCCAATGAACTAGGTATCATCGAGTTTGCAGCTCATACATTATTA
TTGAATTAGATGACTCAATTGGATCCCAAGGTGGTTAG-TTACTTCTGTTGCTTAAGGGTGTGTTTGGTTGGAGAACGAA
GTGGAATGGAATGTCATGGTTCCGTGACATTCCATTCCACTAGAATGGGTTGGTTCCGTTCTTACGTTTGGTTGGGCAAG
TAGGTGTAATGGAACGGTTCCATTTCAGTGTTTGGTTGGAAATAACGTAATGGAAGGCATTTGAT---------------
----------GTCACATATATGCATAATTGTCACTAGTCTTTGTATTTTTAACACATAATAAGAAAA-TGCCAGAAGC-A
TACTAGTTATTCACTCATATA---CATGTCAACAATCTGTCAAAACGCTAGCCTAAAAACTGTCAAAATACAAGTCATGC
ATTCATATTCATGCCAAAATACGAGGCATCCATCCATATAGATGTT------------AAAATACTAGCCATTTACGCAA
AATCATGCTGCTGTGATTAGGAAAATCTACCAAGTTTCAGAACACAATAGTACGTATTCCCGAATCGATTCAGCAGCTGA
TTGTCGCTGCTTGCCCAGGTGTGGCACATAGATAAGGGATTAGCACTGCAGCCGGA----------GCTGGCAGTCAATG
GCCGGCACCACAAAGTCGCCACTGAGGGACGGCAACGAGTTCACCAGCACATAGCTTGCTTGCGAGATGTAGCCGCCTCA
TCACGATCCAGTTTAAGCTCACGGAGATCCGCAGCAACCCGACATGGAGCATCACCGAAGATCCGCAGCAGCCCGAC
>chr3B_653
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------------AAACCAAGAAAATTTCATTCAGCCTTTTAA--TTTTCAAGATTTCAGAAAAAAAATCAGGAAAATTAA
TGTTTGTTATTTTGGATAAATCCGAATTTGAAGAATTGAATAAGCTAGTATATTTGCAGGCCACACACCAACCACGAAAG
CCCATAGAGTCACCCGATTGACGATCCATTTAGC---AGTATCCATCCATGAGACCATGACCGAGATCCAGCCGTAATGG
TAACAGACTCTAACCTCTATCCTTGCGTCTCGGC----------------------------------------------
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------------------------------------ATCAATCAATGGAGGCCAGGCACGCATGATCTTGTGCAAGG---
AAAATCGCTAGCCGCCATGGGCTGTGTCATCTCCAGCTCCTCCGCCCTTACTCCCTCCGCCGCCACC---GCCGCCGTCA
AGCCTGAGACCGTCTCACCCAGGTCAGGCTCGCATGTTCTACTTCTGTACATTAACATGTACCCGACATACCAAGGGCTC
GGC-AACGGCAGGTGCGTCAAATCGGAGACCTTCCTCGCCGGAGGCCGTCGCTGGTACGTTGAGTTCTACCCCGACGGCC
ATGGCCCGCAGGACACCGGCTGGATATCCGTCTTCCTCTTCCTCGTCCCGGCAGGCGCCTTCGAGGTCGTCACGACGCAG
CTCAAGATCAGCCTGCTCGACGCCCACGGGAAGCCGGTGCCGTCCTACGGCAGCGGAGGTGCGTGGAGGTGCTGCACCTT
CTCCACCAATGAAGGGTCGTGGGGTTACTCTCGGTTCATCACCAGGGCTGATCTCGGGAGATTAGGTCACGTGTCGTGGG
AGAACGGTGGTTTCAGTGTCCAATTCGACATCATTGTGTCCAAGGAGATTTCCACTGAGTACGTTCCTGGACGGAACCAT
GATCGCATGCTGGTGCCGCCGCCGGATATCCTCCATGATCTCGGCCAGCTCCTCTCCTCAGGAGAAGGGGCGGACGTCAC
GTTCGAGGTCGGCGGTGAGATGTTCGCCGCACACAGGTGTGTCCTTGGCGCTCGTTCCTCTGTCTTCAGGGCGCAGCTTC
TGGGTCCAATGAAGGAGAGCACATCAATGTGCGTGCAGATAGAGGACATGGAGCCAAAAGTATTCCAGGCATTGCTTCAT
TTTATCTACACCGATTCGGTGCCTGAGATCGACGATGCTGACGCAGTGGGGATGATCCAGCATTTGCTTGTCGCCGCGGA
CAGGTACAGCCTCAAGAGACTGAAGTTGACCTGCGAAGACAAACTATGCAGTTACATCAACACTAGCACAGTGGCCACTA
CAGTGGCACTCGCCGAGCAACATGCTTGTCCTGCACTCAAGGAGGAATGCTTCAGATTCCTCGAGTCCTGTAACAATAGC
ATGCTGGATCTGATCACACGGAGTTCTGACTTTGAGCATCTAGCAAGAAGTTGCCCGTCTATTATGAAGGAGCTTATTCC
CAAACTTGCTCGCAAACCCCCGTGTGTAACAAACTATAGCAACATGTAACTAGCTA-------------TA-TATTGAGG
AAGTCGCCAAAGTCCGCATTTAGTGATCAACTGATGTCGATGAGCAT--GCACATGATGGCCAAAGAATGTATTGG----
-----ACTGCTATCTTTTTGCTTGGTCACGGTGCAGAAACACACCTTTTTATTTTATGTTTGAGTATTACTACGGAGTCA
TTGATTATTTGAATCATCGAATTTTATGCTGTGCTGCCAATGATCTAGGTATCACCGAGTTTGTAGCTGATACGTTATTA
TCAAATTACACGACTCAGTTGGATCCCAAGGGGGTTAGTTTACTTCTGTTGCTTAA------------------------
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>chr3D_653
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------------AAACCAAGAAAATTTCATTCAGCCTTTTAA--TTTCCAAGATTTCAGAAAAAAAATCAGGAAAATTAA
TGTTTGTTATTTTGGATAAATCCGAATTTGAAGAATTGAATAAGCTAGTATATTTGCAGGCCACAGACCAACCACGAAAG
CCCATAGAGTCACCCGATCGACGATCCATTCAGC---AGTATCCATCCATGAGACCATGACCGAGATCCAGCCGTAATGG
TAATAGACTCTAACCTCTATCCTTGCGTCTCGGCTAAAATCCCAACTG----CCTTCCTTCTAAGGGCATGTACAACGGG
TGCGCTTACAATCGGCGTCAGGGTTCGTCCGATTTGGTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGGGCTGGCATCGATGCCGAGCCAGTCGCCGAGCGCTTAGCCTATTTTTTTTCAC
GCGACCCTTTTTCTCCGTTCGGATCTGGCAGCGGGCGCTACCTACAGCGCTACAAATCGGCAACCGCTCAACTAACTCAG
CTGGTCGTTGTACTAAAAACCAGCTCTACTCAACTAACTTAGATGATTTCGTTTTGCAGCTGGACAAATAATTCTTTTCT
TTCCTCTTCACGCACAACAATAATCTAGAATAAACTATAGAGCTTGTCAATCTATTATAAATCTACATGAAACCTGAATA
CTTACAATAAAAATTGAATTGATACAAAATAAATGTGTAAAAATGAAATGCTTATGGTTGCCAAGCTGGCCCAACAGGGA
CAAAGATCCCAATCTTAAAACCTGAAAGCACGGTGAGATAAAGTTAGAAAAATATATGCCAAGTTACTTCAACCGTTCTT
TCAGTCATACACGGTTAAATCGGCCTAACTAAATCATGCATGCAGTGCTGACTAAATCATGCATGCAGTAAAGCTATCTC
GTTATATATAGTCCTAGTTGCAGGTTCCAGTTCCACGCCCATCCCAAAAATTTCTGCTCATACACAAGCACAATCCTACT
CAAATCTGGTACAAGCTTTTGTTCATACACATCACATCTTTCAATGGATATCGGCCATGCCAACATCGGAGACATACACT
TACAATGGACCGAAGAGGATAATCTATGCCTGGTAAGTCATTTGTTTAATTATTAGTAGTTACTATATCATGAAAAGCTT
GGCCTAACAACATTTTCTGAATTGAGTAGGTAAATGCTTGGTTAAATGTTCCCACTGATTTTGTTATTGGCAATGAAAAC
ACTGCACGGGATTTTTGGAATCAAGTCGCTGAAGAATATAACGCAAATACCGCTGATAATCGAAGAAGACAACCTATCCA
AATCAAACGCCGTTGGAGTAAGATGAGCTCAGAAATTCTGCTATTCGATGGCATGTGGCGCAGGGTTGACGATGCATTCA
CAGCTACTGGAATATAACCAGGACTTGGTTTCCAAATCTCTAGAGATGTATAGGTTAGAACAAAATCAATCATTCAAATT
TCTCCACATGTGGATGTTCATACGGAACTATCCCCAGTGGAATGCAATGTACTGTCGAGTCAAAAAGCCATGATTTAGAT
AATAAATTGTTGTTCTTATTCCAAGTTGTACTCCCCAAATTTGTTTTTTTTTTGCGAGTTTTTTTTTGGCGATTCCCCAA
ATTTCTTTTTAGGACTATGTAAATCAAAGATCAGTCAGTTTGGAATATGCCAAAAGTTTAGATCACCAAATATTGTTCTC
ATATGATAATTAAAATTTCCTTCATGCAAGTATTGTTCTATCCAGAAAGAACATGGCGCCTACAGATCCCCATATATAGT
TTCATGTGTGCATCTCAGCACCAACCAAATCAATAATTCAGGGATTAGTACAGCGAGGGGTACGGAGATTACCTCGACGC
CGTACGTGATGGCGCTGCCGGGTGAGCTTGGTCGTCCTGTACGCCTCGTGCTCGAGTGCCGCTCCCTCCTCCCACCTTCC
AGTCCGCCAGCCTCACCGCGAGCTCCCCCGGCCTCGTCTGAGTCCTCTCCATGCCGGAAGGCGCGGCTGCTGCCTGCTCT
GCTCTACTGCTTCCTCCCCCCTCCTGACCATCAGCCTCGACGCGAGCTCGTCCGGCCTCGTCCCCATGCCCATGCGGCGC
GGCTGCTTCCTCCTCCGTGAACACGGCGCCCTCTTCCTATCCGTCAGCCTCGCCACCATCCCATCCGGCCTCGTCTCCAT
GGAGGAAGAGGCGGGCTGCTGCATCCTCCGGCCGCGCGCCGCCATTCGCCGTGGCTGCCATCTAAGGGTGGGGGAGGTCG
GCCTGCAGGTCTTGTCCCACTCGCTGGATCTGACGAGAGATGGTCTTGTGCAGAAGGGTGTGGAGAGTTCGAGAGGATAG
AGCTAGCTGAATGAGGACTGAGCTGAGTGGGTAGCAGGCTGGCAGAGCTGGTTCGTTGTTCGGTCAGACGGTGGCGTCGA
CGCTTCGGTTTGTGCGTTGGAGGGACGGGCGCTTCACACGTTCGTCCAGAAGAAAAGAAAATCAGATAAGCCCTCAAATA
GCGCTCGTGCGTTGCAAGCCCAATCGCTTACACCGGTGCTTCCCCCTAAATTAATTTTCTTTTTAACGCAAGCGCCCAAA
TAAGCGCCCGTGCATTGGAGATGCCCTAATAAACTCATCAATCAATGGAAGCCAGGCACGCAAGATCTTGTGCAAGG---
AAAATCGCTAGCCGCCATGAGCTGTGTCATGTCCAGCTCCTCCACCCTGACTCCCTCCGCCGCCGCC---GCCG---TCA
AGCCTCAGACCGTCTCACCCAGGTCAGCCTCGCATGTTCTACTTCTGTACATTAACATGTACCCGACATACCAAGGGCTC
GGCAAACGGCAGGTGCGTCAAATCGGAGACCTTCCTCGCCGGAGGCCGTCGCTGGTACGTCGAGTTCTACCCCGACGGCC
ACGGCCCGCGGGACGCTGGCTGGATATCCGTCTTCCTCTTCCTCGTCCCGGCCGGCGCCTACGAGGTCGTGACGACGCAG
CTCAAGATCAGCCTGCTCGACGCCCACGGGAAGCCGGTGCCGTCCTACGGCAGCGGAGGTGCGTGGAGGTGCTGCGCCTT
CTCCACCAATCAAGGGTCGTGGGGTTACTCTCGGTTCATCACCAGGGCTGATCTCGGGAGATTAGGTCACGTGTCGTGGG
AGAACGGTGGTTTCAGCGTCCAATTCGATATCATCGTGTCCAAGGAGACTTCCACTGAGTACGTTCCTGT----------
--TCGCATGCTAGTGCCGCCGCCGGATATCCTCCATGATCTCGGTCAGCTCCTCTCCACCGGTGAAGGGGCCGATGTCAC
GTTCGAGGTCGGCGGTGAGATCTTCGTCGCACACAGGTGTGTCCTTGCCGCTCGTTCCTCCGTCTTCAGGGCAGAGCTTC
TGGGTCCAATGAAGGAGAGCACATCAATGTGCGTGCACATAAAGGACATGGAGCCAAATGTATTCAAGGCATTGCTTCAT
TTTATCTACACCGATTCCGTGCCTGAGATCGACGATGCTGATGCACTAAGCATGATCCAGCATTTGCTTGTTGCCGCGGA
CAGGTACGGCCTCAAGAGACTGAAGTTGACCTGCGAAGAGAAACTATGCACTTACATCAACACTAGCACAGTGGCCACTA
CAGTGGCACTCGCCGAGCAACATGCTTGTACTACACTCAAGGAGGAATGCTTCAGATTCCTCGAGTCATGTAACAATAGC
ATGCTGGATCTGATCACACGGAGTTCTGACTTTGAGCATCTCGCAAGAAGTTGCCCGTCTATTATCAAGGAGCTTATTCC
CAAACTTCCTCGCAAACCCCCTTGTGTAACAAACTATGGCAACATGTAACTAGCTACTCCCCTTGAGTATA-TATTGAGG
AAATTGCCAAAGTCCGCATTTAGTGATCAACTGATGTCGATGAGGAT--GCACATGATGGCCAAAGAAAGTACTGG----
-----ACTGCTATCTTTTTGCTTGGTCACGGTGCACAAACACACCTTTTTATTTTATGTTTGAGTATTACTATGGAGTCA
TTGATTATTTGAATCATCGAATTTTGTGCTGTGCTGCCAATGATCTAGGTATCACCGAGTTTGCAGCTGATACATTATTA
TTAAATTACATGACTCAATTGGATCCCAAGGGGGTTAGTTTACTTCTGTTGCTTAA------------------------
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>chr3B_1415
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-------------------------------CGATTCATCACCAGGGCTGATCTGGAGAGATTAGGTCACGTGTCGTGGG
AGAACGGTGGTTTCAGCGTCCAATTCGATATCATCGTGTCCAAGGAGAGTTCCACTGAGTACGTCCCTGGCCGGAACCGT
GATCGCATGCCGGTGCCGCCGCCGGATATCCTCCATGATCTCGGCCAGCTCCTCTCCTCGGGAGAAGGGGCGGACGTGAC
GTTCGAGGTCGGCGGTGAGATCTTCGCCGCACACAGGTGTGTCCTTGCCGCTCGTTCCTCCGTCTTCAGGGCGGAGCTTC
TGGGTCCAATGAAGGAGAGCACATCAATGTGCATGCAGATAGAGGACATGGAGCCAAAAATATTTCAGGCATTGCTTCAT
TTTATCTACACCGATTCGGTGCCTGAGATCGACGATGCTGACGCAGTGGGGATGGTCCAGCATTTGCTTGTCGCCGCGGA
CAGGTACAGCCTCAAGAGACTGAAGTTGACCTGCGAAGACAAACTATGCAGTTACATCAACACTAGCACAGTGGCCACTA
CAGTGGCACTCGCCGAGCAACATGCTTGTCCTGCACTCAAGGAGGAATGCTTCAGATTCCTCGAGTCCTGTAACAATAGC
ATGCTGGATCTGATCACACGGAGTTCTGACTTTGAGCATCTAGCAAGAAGTTGCCCGTCTATTATGAAGGAGCTTATTCC
CAAACTTGCTCGCAAACCCCCTTGTGTAAAAAAATATAGCAACATGTAACTAGCTA-------------TATTATTGAGG
AAATTGCCAAAGTCCACATTTAGTGATCAACTGCTGTCGACGAGGAT--GCGCATGATGGCCAAAGAATGTACTGGACTG
GTAGTACTGCTATCTTTTTGCTTGGTCATGGTGCACAG-CGCACCTTTTTATTTAATGCTTGAGTATTACTATGGAGTCA
TTGATTATTTGAATTATCAAATTTTACGGTGTGCTGCCAACGAACTAGGTATCATCGAGTTTGCAGCTCATACATTATTA
TTGAACTACATGACACAATTGGATCCCAAGGTGGTTAG-TTACTTCTGTTGCTTAA------------------------
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>chr3A_2459
CTTAG---------------------------------------------------------------------------
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---------------------------------------------------------GGTGTGTTTGGTTGTGGAACGAA
GTGGAATGGAATGTCATGGTTCCGTGACATTCCGTTCCACTAGAATGGGTTGATTCCGTTCCTACGTTTGGTTGGGCAAA
TAGGTATAATGGAACGGTTCCATTTCAGTGTTTGGTTAGAAATAACATAATGGAAGGCATTTGAT---------------
----------GTCACATATATGCATAATTGTCATTAGTCTTTGTATTTTTAACACATAATAAAAAATT--CCAAACAAAA
TACTAGTTATTCACTCATATA---CATGTCAAAAATCTGTT-AAAAACTAGCCTAAAAACTGTCAAAATACAAGTTATGC
ATTCATATTCATGTCAAAATACAAGGCATCCATCCATATATATGTCAAAAGATATGTCAAAATACTAGCCATTTACACAA
AATCATGCTGCTGTGATTAGGAAAATCTACCAAGTTTCAGAACACAATAATACGTATTCCTGAATCGATTCAGTAGCTGA
TTGTCGCTGCTTGCCCAGGTGTGGCACATAGATAAGGGATTAGCACTGAAGCCGGA----------GCTGG---------
-CTGGCACCACAAAGTCGCCACTGAGGGACAACAACGAGTTCACCAGCACATAGCTTGCTTGCGAGGTGCAGCCG-CTCA
CCACGATCCAGTTTAAGCTCACGGAGATCCGTAGCGACCCGACATGGAGCATCGCCGGAGATCCACAGCAGCTCGAC
>chr3B_2459
CTTT----------------------------------------------------------------------------
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-------------------------------------------------------AGGGTGTGTTTGGTTGGGGAACGAA
GTGGAATAGAATGGCATGGTTCCATGGCATTCCGTTCCACTAGAATGGGTCTGTTCCGTTCCTATATTTGATTGGGCAAA
TAGGTGTAATGGAACGGTTTCATTTTAATGTTTGGTTGGAAATAACGTAACGAAAGGCATTTGATTCATCTCACTATTCT
TAAAAATAATGTCACGTGTATGCATAATTGTCACTAGTCTTTGTATTTTTAACACATAATAAGAAAAATGCCAAACAAAA
TACTAGTTATTCAATCATATA---CATGTCAAAAATCTGTCAAAACACTAGCCTAAAAATTGTCAAAGTACAAGTCGTGC
ATCTATATTCATGTCAAAATACAAGTCATCCATCCATATAGATGCATAAAGATCTGTCAAAATACAAGTCATTTACACAA
AATCGTACTGCTGTGATTAGGAAAAGCTACCAAGCTTCTGAACATAATAATG----TTCCCAAATCGATTCAGCAGCTCC
TTGTTCCTGCTTGCCTAGGTGTGGCACATAGATGAGGGATTAGCACTCCAGCCGGAGCTGGCAGTCGCTGG---------
-CCGGCACTACAAAGTCGCCACTGAGGGACAGCAAGGAGCTCATCAGGACAAAGCTTGCCTGCGACGTGCAGCCAT-TCG
TCGTGATCCAGTTTCAGCTCGCGGAGATCCTCAGGGACCTGACGTGGAGCATCGTCGGAGATCCGCAGCAGCC----
>chr1D_2459
CTTAG---------------------------------------------------------------------------
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---------------------------------------------------------GGTGTGTTTGCTTGGGGAACGAA
GTGGAATGGAATGTCATGGTTCCGTGACATTCCCTTCCACTAGAATGGGTTGATTCCGTTCCTACGTTTGGTTGGGCAAG
TAGGTATAATGGAACGGTTCCATTTCAGTGTTTGGTTAGAAATAAAGTAATGGAAGGCATTTGAT---------------
----------GTCACATATATGCATGATTGTCATTAGTCTTTGTATTTTTAACACATAATAAAAA-A-TGCCAAACAAAA
TACTAGTTATTCACTCATATA---CATGTCAAAAATCTGTCAAAAAACTAGCCTAAAAACTGTCAAAATACAAGTTATGC
AATCATATTCATGTCAAAATACAAGGCATCCATCCATATATATGTCAAAAGATATGTCAAAATACTAGCCATTTACACAA
AATCATGCTGCTGTGATTAGGAAAATCTACCAAGTTTTAGAACACAATAATACGTATTCCCGAATCAATTCAGTAGCTGA
TTGTCGCTGCTTGCCCAGGTGTGGCACATAGATAAGGGATTAGCACTGTAGCCGGAGCTGGCAGTCACTGG---------
-CCGGCACCACATAGTCGCCACTGAGGGACAGCAACGAGTTCACCAGCACATAGCTTGCTTGCGAGGTGCAGCCG-CTCA
CCGTGATCCAGTTTCAGCTCACAGAGATCCGCAGCGACCCGACATGGAGCATCGCCGGAGATCCACAACAGCTCGAC
>chr7B_2462
AAA-----------------------------------------------------------------------------
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---------------------------------------------------------GGTGTGTTTGGTTGGGGAACGAA
GTGGAATGGAATGTCATGGTTCCGTCACATTCCGTTCCACTAGAATGGGTTGGTTCCGTTCATACGTTTGGTTGTGCAAG
TAGGTATAATGGAATGGTTCCATTTTAGTGTTTGGTTAGTTATAACGTAATGGAAGGCATTTGAT---------------
----------GTCACATATATGCATAATTGTCACTAGTCTTTGTATTTTTAACACATAATAAAAAAA-TGCCAAACAAAA
TACTAGTTATTCACTCATATA---CATGTCAAAAATCTGTC-AAAAACTAGCCTAAAAACTGTCAAAATACAAGTTATGC
ATTCATATTCATGTCAAAATACAAGCCATCCATCCATATATA------------TGTCAAAATACTAGCCATTTAAACAA
AATCATGTTGTTGTGATTAGAAAAATCTACCAAGTTTCAGAACACAATAATACGTATTCCCGAATCGATTCAGCAGCTGA
TTGTCACTGCTTGCCTAGGTGAGGAACATAGATAAGGGACAGCAACC------------GGCAGTCACCGG---------
-CCGACACCACAAAGTCGCCACTGAGGGAAAAAATTAGTT--ACCAGCACATAGCTTGCTTGCGAGGTGCAGCCG-CTCA
CCGCGATCCAGTTTCAGCTCACGGAGATCCACACCGACCCGACATGGAGCATCGCCGGAGATCCACAATAGCCC---
>chr2A_2463
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-------------------------------------------------------AGGGTGTGTTTGGTTCGGGAACGAA
GTGGAATGGAATGTCATGGTTTCGTGACATTCCATTCCACTAGAATGGGTTGATTCCGTTCCTACGTTTGGTTGGGCAAG
TAGGTATAATGGAACGGTTCCATTTCAGTGTTTAGTTAGAAATAAAGTAATGGAAGGCATTTGAT---------------
----------GTCACATATATGCATGATTGTCATTAGTCTTTGTATTTATAACACATAATAAAAA-G-TGCCAAACAAAA
TACTAGTTATTCACTCATATAGTACATGTCAAAAATCTGTCAAAAAACTAGCCTAAAAACTGTCAAAATACAAGTTATGC
ATTCATATTCATGTCAAAATGCAAAGCCTCCATCCATATATATGTCAAAAGATATGTCAAAATACTAGCCATTTACACAA
AATCATGCTGCTGTGATTAGGAAAATCTACCAAGTTTCAGAACACAATAATACGTATTCCCGAATCGATTCAGTAGTTGA
TTGTCGCTGCTTGCCCAACTGTGGCACATAGATAAGGGATTAGCACTGCAGCCGGAGCTGGCAGTCACTGG---------
-CCGACACCACAAAGTCGCTACTGAGGGACAGCAACGAGTTCACCAGCACATAGCTTGCTTGCGAGGTGCAGCCG-CTTA
CCGCGATCCAGTTTCAGCTCACGGAGATCCGCAGCGACCCGACATGGAGCATCGCCAGAGATCCACAGCAGCTCGAC
>chr7B_2464
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--------------------------------------------------------GGGTGTGTTTGGTTCGGGAACGAA
GTGGAATGGAATGTCATGGTTTCGTGACATTCCATTCCACTAGAATGGGTTGATTCCGTTCCTACGTTTGGTTGGGCAAG
TAGGTATAATGGAACGGTTCCATTTCAGTGTTTAGTTAGAAATAAAGTAATGGAAGGCATTTGAT---------------
----------GTCACATATATGCATGATTGTCATTAGTCTTTGTATTTATAACACATAATAAAAA-G-TGCCAAACAAAA
TACTAGTTATTCACTCATATAGTACATGTCAAAAATCTGTCAAAAAACTAGCCTAAAAACTGTCAAAATACAAGTTATGC
ATTCATATTCATGTCAAAATGCAAAGCCTCCATCCATATATATGTCAAAAGATATGTCAAAATACTAGCCATTTACACAA
AATCATGCTGCTGTGATTAGGAAAATCTACCAAGTTTCAGAACACAATAATACGTATTCCCGAATCGATTCAGTAGTTGA
TTGTCGCTGCTTGCCCAACTGTGGCACATAGATAAGGGATTAGCACTGCAGCCGGAGCTGGCAGTCACTGG---------
-CCGACACCACAAAGTCGCTACTGAGGGACAGCAACGAGTTCACCAGCACATAGCTTGCTTGCGAGGTGCAGCCG-CTTA
CCGCGATCCAGTTTCAGCTCACGAAGATCCGCAGCGACCCGACATGGAGCATCGCCAGAGATCCACAGCAGCTCGAC
>SNPs
SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS-----------------S---S----SS-SSS-------S-------S------S-S--S---S-S-S
SS---S---S---------S-----S-------------------------------S------------------S---
--------S-SSSS-SSS-----------S----SSS----S--------------------------------------
-----S-----------------------------S------------SSSS------------SSS-------------
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--------------------------------------------------------------------------SSSSSS
-------S-------------S-------------------------SS------------S-----SSS----------
----------------------------------------------S-----S---S-----------------------
-----------S------------------------------------S-------------------------------
-S------------------------------------------------------------------------------
S-------------S--------S---------------------------S--S------S------------------
-----S----------S----------------------------------------------------------S----
--------------------------------------------------------------------------------
---------------------S---------------------------------------------------------S
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
-----------------------S--SS----------S-----------------------------------------
-------------------------------------------------S----------------------S-------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
-----S-----------------------------------------SS-------------------------------
--------------------------------------------------------S-----------------------
-----------------S--------------------------------------------------------------
--------S---------------------------------------------------------------S-------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S-SSS--
--------------------------------S-------------S---------------------------------
-------------S--------S----------------------S------------------------------S---
-------------------------------------------------S------------------------------
-----------------------------------------------------------------------SSSSSSSSS
S-----------------------------S-----------------------------------S--S-----S----
-----------------------------------S-----------------S---S-------------------
>forward_188
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--------GTGGTATCTCGGCACCTACG----------------------------------------------------
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>reverse_3852
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-----------AGTGCGTCAAATCGGAGACC-------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>forward_250
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----------------------------------------------------------------------CTGCCACTGA
TGCAAGAGGA----------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4156
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---------------------------------------------------------------------------ATGGG
AGAACGGTGGTTTCA-----------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>forward_251
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------TGCCACTGA
TGCAAGAGGAG---------------------------------------------------------------------
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>reverse_4369
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------------------------------------------------TGCTCGTTCCTCTGTCTTCAG-----------
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-----------------------------------------------------------------------------
>forward_631
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--------------------------------------------------------------------------------
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---------------------------------------------------GCTTACGGAGGGGTTTGTCA---------
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>reverse_5058
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-----------------TGAATTTTACGGTGTGCTGCC------------------------------------------
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-----------------------------------------------------------------------------
