>input_sequence_59198
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------------AT
GTCTGATAACAGTATTCAACGAGCATTGCTACCTGATAACCCTGATGCCAATGTGCTCCAAACAAAGCCTTCGCAGGGAG
CCAAGCGGTTCCGGAGATGCAGGTCGGCTCCCAGATCAGAGACCGATGAAAAACCACAAGAAAATGGCTCGTCGCTTCCA
GCCAAGGAGTTGTTCAGCGTGGTGCGGCCGAGCTTCAGACTAGTAGGGTTCCTCCTATTTCTCTACCTACTAGCAGGCGT
CATCGTCTTTTACCTTGTCATGGATCAGTTATCTGGCAAGAGAACCAACAGAGTGCTTGACGCACTGTACTTCTGCATTG
TCACGATGACATCGGTTGGCTATGGAGACCTTGTCCCTAACACAGACACGACGAAGCTGCTCGCCTGTGTTTTCGTCTTC
ACGGGCATGGCGATCATTGCTCTCTTCGTGAGCAAGTCAGCAGACTATCTCGTCGAGAAGCAGGAGGTGTTGTTCTTCAA
GGCACTGCACATGAACATGAAGTGTGGCGAGGCCAAAATGCTCAGACAAATTGAGACAAACAAGACAAAGTACAAATTCT
ACACGGCCGCTCTGCTTCTTGTGACGGCCATTGTTGTGGGGACTGTTTTTCTCTGGAAGGTTGAGAAGCTGAGCCTTGTT
GACTCCTTTTATTGTGTCTGTGCCACAATCACTACCCTGGGTTATGGGGATAAAAGCTTCTCGTCCCAATTGGGGCGCAC
TTTCGCGGTGTTTTGGATAATTACAAGCACCATAATTCTGGCGCTGTTCTTCATGTACCTCGCTGAGATCTACACCGAGC
GACGGCAGAAGATGCTGGCCAAATGGGTTCTCACACGGAGAGTAACAACCATGGATCTTGAAGCAGCTGATCTGGATAGT
GATCGGAAAGTGGGGTAAGCACATAGTGCGTTTTCAGTATTCTTCCCTCCATCGTATCCCTTGAGATTTTGCAGGTAATG
AACAC-TGATGTTGA-TTTGTGAACTTTGATAAGTGCAGTGCTGCTGAATTTGTCGTGTACAAGCTCAAAGAACTGGGGA
AGATCAGCCAAGAGGACATATCTTCTTTTCTAGAGGAGTTTGACAAACTCGACATTGACCAGTCCGGCACGCTCTCCACA
TATGACCTTACTCAGGCACAATCCGGTCAGTGA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>chr5D_1_TraesCS5D01G401200
TGCGACCTCCACGGCTCAACCCCACGCGGCGCCAACACGTAGAGATCCGGCGCGGCCGGCGTGGGGCGTGCGTGCGTCTC
TCCATCTCCGCCCCTCGGCTCGGGCCGACAAAAAGGGAGGCAACGCGGAGAGGGAGGAGATCAACTGAGCAGAGCAGGAG
AGCTCGAGGGAAGGAGAAA---------AGGAAGAAGGCGCCCTCAAACCC--A--AAAAAGCTTCGCCCAGCTTCCGTC
GGCCGGAGCCGGAGGGAGGTAAGGGATGATTATC--TCTGTGTCTTCTCAACCGTGCTCTGTTCTCTGCTTGCTTCCTGC
GAATGGCCGGAGCTGCCAGAATTGCCTTTCGAATTCTGTAGCTGCATCACAAGTAGAAGTAGATGCCCCTGCTGTATGCT
AGTAGCAGAGTGGAATGCTTCCCCTGCTCGTCTTACTTTCCTCTTTTACAATCCATCTCAACTCAAGGTTGGTTTCCAGC
ATCTGGCTCTCAGTTTCATCCCTTGGGTTGCAGATTAAGCTAGCAGTAGAGATCCGATCTGAACCAGTAGCAGTGCGACT
TTGTCCAGAAAGAAAGCGACAGAATAGGTAACTTA-------------TTTTCTATACTGTACTCC----TAGATAAGA-
-----GAAGAATTCTGTGCCTAAATGCCTAGAAAGTCAAAAAGATCAGGAATTCAAGATAACAGCCAAGGAACTGGCCCT
TATTTTTGACCAAATTTATTTTGCCTGCCTCTCTTTGACCTGCAGTCCAATAATTTAATGCTTAAACTGATGGTGATAGG
AAATTCTTGTGTCAGCTAGGACACGTATAATTCACACAAGCTGGGAGGAATAGAGTTTCTCGGTGGTTCATGCAATTCAG
TGCATATCCACCATCTTGCCTTATTTTTTACCTGATATTTAGTGAGCTTCTAAACTTCTTCCTCGCATATCTGTAAAACC
ATACTGTAACGTGTGCCATTCTCTGAATCATAGGGTTTCAATTGCGACGGCAATTCACAACAAATCCAGCATAAGCCAAT
GTCTGATAACAGTATTCAACGAGCATTGCTACCTGATAACCCTGATGCCAATGTGCTCCAAACAAAGCCTTCGCAGGGAG
CCAAGCGGTTCCGGAGATGCAGGTCGGCTCCCAGATCAGAGACCGATGAAAAACCACAAGAAAATGGCTCGTCGCTTCCA
GCCAAGGAGTTGTTCAGCGTGGTGCGGCCGAGCTTCAGACTAGTAGGGTTCCTCCTATTTCTCTACCTACTAGCAGGCGT
CATCGTCTTTTACCTTGTCATGGATCAGTTATCTGGCAAGAGAACCAACAGAGTGCTTGACGCACTGTACTTCTGCATTG
TCACGATGACATCGGTTGGCTATGGAGACCTTGTCCCTAACACAGACACGACGAAGCTGCTCGCCTGTGTTTTCGTCTTC
ACGGGCATGGCGATCATTGCTCTCTTCGTGAGCAAGTCAGCAGACTATCTCGTCGAGAAGCAGGAGGTGTTGTTCTTCAA
GGCACTGCACATGAACATGAAGTGTGGCGAGGCCAAAATGCTCAGACAAATTGAGACAAACAAGACAAAGTACAAATTCT
ACACGGCCGCTCTGCTTCTTGTGACGGCCATTGTTGTGGGGACTGTTTTTCTCTGGAAGGTTGAGAAGCTGAGCCTTGTT
GACTCCTTTTATTGTGTCTGTGCCACAATCACTACCCTGGGTTATGGGGATAAAAGCTTCTCGTCCCAATTGGGGCGCAC
TTTCGCGGTGTTTTGGATAATTACAAGCACCATAATTCTGGCGCTGTTCTTCATGTACCTCGCTGAGATCTACACCGAGC
GACGGCAGAAGATGCTGGCCAAATGGGTTCTCACACGGAGAGTAACAACCATGGATCTTGAAGCAGCTGATCTGGATAGT
GATCGGAAAGTGGGGTAAGCACATAGTGCGTTTTCAGTATTCTTCCCTCCATCGTATCCCTTGAGATTTTGCAGGTAATG
AACAC-TGATGTTGA-TTTGTGAACTTTGATAAGTGCAGTGCTGCTGAATTTGTCGTGTACAAGCTCAAAGAACTGGGGA
AGATCAGCCAAGAGGACATATCTTCTTTTCTAGAGGAGTTTGACAAACTCGACATTGACCAGTCCGGCACGCTCTCCACA
TATGACCTTACTCAGGCACAATCCGGTCAGTGACGAACATATGGGCTTGTACTTAATGTTACAGCTTAAATG-----GTT
GAATGGTTAGTTAATGCTGTTAATTAATTCTGTAATCTAGTAAAAGTGTCAAAAGATACGACCTT-GTTGAG--------
-----TTAACACAATGGATCTGCTCATATGCACCTGGACACGTGTAAGAAAGAAGTATTTGGTGATGCTTCGCTAAGCTT
ATGTGCCTGTGTACATGAAGTTTGTTAAGCCATTTTCCAGTCATGAAATATTTCCAGCTTCCAATATGGTAGCCTGTATA
GATGTA--TTTTTTTCTTGGATTTGTGCTTCTGGCTCCAGAATTGCAAGGCAAGCAACAATATATCTAATGATGCTCGGC
AAGTGGAGGCTGAGATCTCAGGTAAATAGGAATTTGCTTCCATGAGATGGTGACCTGGTAGAACTAAGAGGACATCCAGA
GTTCCCTATTCAGGCATTCACTTCTAA--CAGGTTGCCCTTTGCAC----ATTAACATAATAAACCCAAATTAATCTATG
CAC--AACAAGAAGCATTATGAGTAGCAATGCAGTAACTGACGGTATACACCAATTGCAGTCAAACTCTTGTTGTGAATA
CCAAGGTGATTGTT-------TGATCAGACAAGCAACTACAAGTGGTGTAACCAAAACAAAAGGAGACTCTTAGCCTAGC
ACAATTCTGCATAGATACAGGTCTATGCAATCCTATATGTACCTCCCTAGTCTGATCTGTTGGGGGATGTACTCTTGCGA
CAGAAACGAAATGGAACTTGCTGACAATGCTTCAATCTCAAATTTGACACCCATTTCCAGCATGGCTTCCAACTTCAACC
TGCCAAGGATTATATAGTCATGAATATTTCAGGAAGAAAAATCTTCAGGAAAAAGAACCGGCTATTAACTACACAAATGA
TTCTAATTTTAAACACAAACCCGTTGACATTAGAACTGACCAGGTGAAAGCAGCCATAAACCTTTTGGAACAATGGAGTA
CCTACTGCCGTTAAGAGTCGACTAGGTGA
>chr5B_2
-GCGACCTCCACAGCTCAA-CCCACGCGGCACCAACACGTAGAGATAGAT-----CCGGCGTGGCGCGTGCGTGCGTCTC
--CATCTCCGCCCCTCAGCTCGGGCCGACAAAAAGGGAGGCAACGCGGAGAGGGAGGAGATCAGCTGAGCAGAGCAGGAG
AGCTCGAGGGAAGGAGAAA---------AGGAAGAAGGCGCCCTCAAACCC--AGAAAA--GCTCCGCCCAGCTTCCGTC
GGCCGGAGCCGGAGGGAGGTAAGGG---ATGATC--TCTGCGTCTTCTCAACCGTGCTCCGTTCTCTGCTTGCTTCGTGC
GATTGGCCGGAGCTGCCAGAATTGCCTTCCGAATTCTGTAGCTGCATCACAAGTAGAAGCAGATGGCCCTGCTGTATGCT
AGTAGCAGAGTGGAATGCTTCCCCTGCTCGTCCTACTCTCCTCTTTTACAATCCATCTCAACCCAAGGTTGGTTTCCAGC
ATTTGGCTCTCAGTTTCATCCCTTGGGTTGCAGATTAAGCTAGCAGTAGAGATCCGATCTGAACCAGTAGCAGTGCGACT
TTGTCCAGAAAGAAAGCGACAGAGTAGGTAACTTG-------------TTTTCTATACTGTACTCC----TAGATAAGAT
AAGAGGAAAATTCCTGTGCCTAGAGGCCCAGAAAGTCAAAAAGATCAGGAATTCAAGATAACAGCCA-GGAATTGGCCCT
TATTTTTGACCAAACTTATTTTGCCTGCCTCTCTTTGACCTGCAGTCCAATAATTTAATGCTTAAACTGATGGTGATAGG
AAATTCTTGTGTCAGCTAGGACACGTATAATTCACACAAGCTGAGAGGAATAGAGTTTCTCGGTGGTTCATGCAATTCAG
TGCATATCCACGGTCTTGCCTTATTTTTTACCTGATATTTAATGAGCTTCTAAACTTCTTCCTCGCATATCTGTAAAACC
ATACTCTAACGTGTGCCATTCTCTGAATCATAGGGCTTCAATTGCGACGGCAATTCACAACAAATCCAGCATAAGCCAAT
GTCTGACAACAGCATTCAGCGAGCATTGCTACCTGAGAACCCCGATGCCAATGTGCTCCAAAGAAAGCCGTCGCAAGGAG
CCAAGCGGTTCCGAAGATGCAGGTCGGCTCCCAGATCAGAGACCGATGAAAAACCACAAGAAAATGGCTCGTCGCTTCCA
GCCAAGGAGTTGTTCAGCGTGGTACGGCCCAGCTTCAGACTAGTAGGGTTCCTCCTATTTCTCTACCTGCTAGTTGGCGT
CGTAGTCTTTTACCTTGTCATGGATCAGTTATCTGGCAAGAGAACCAACAGAGTGCTCGACGCACTGTACTTCTGCATTG
TCACGATGACATCGGTGGGCTATGGAGACCTTGTTCCTAACAGCGACACGACAAAGCTGCTCGCTTGTGTTTTCGTCTTC
ACCGGCATGGCGATTATTGCTCTCTTCGTGAGCAAGTCGGCAGACTATCTCGTCGAGAAGCAGGAGGTGTTGTTCTTCAA
GGCACTGCACATGAATATGAAGTGTGGCGAGGCCAGAATGCTCAGACAAATTGAGACAAACAAGACAAAGTACAAGTTCT
ACACGGCCGCTCTGCTTCTTGTGACGGCCATTGTTGTGGGGACTGTTTTTCTCTGGAAGGTTGAGAAGCTGAGCCTTGTT
GACTCCTTTTATTGTGTCTGTGCCACAATCACTACCTTGGGTTATGGGGATAAAAGCTTCTCGTCCCAACTGGGGCGCAC
TTTCGCGGTGTTTTGGATAATTACAAGCACCATAATTCTGGCGCTCTTCTTCATGTACCTCGCCGAGATCTACACCGAGC
GACGGCAAAAGATGCTGGCCAAATGGGTTCTCACACGGAGAGTAACAACCATGGATCTTGAAGCAGCTGATCTGGATAAT
GATCGGAAAGTGGGGTAAGCACATAATGCGTTTTCAGTATTCTTCCCTCCATCATATCCTA--AGATTTTGTAGGTAATG
AG-------TGTTGA-TTTGTGAACTTTGATATGTGCAGTGCTGCTGAATTTGTCGTGTACAAGCTCAAAGAACTGGGGA
AGATCAGCCAAGAGGACATATCTTCTTTTCTAGAGGAGTTTGACAAACTCGACGTTGACCAGTCCGGCACACTCTCCACA
TATGACCTTACTCAGGCACAATCCGGTCAGTGACGAACATATGGGCCTGTACTTAATCTTACAGCTTAAATACTTTAGTT
GAATGGTCGATTAACACTGTTAATTAATTCTGTAATCTAGTAAA-GTGTCAAAAGATACGACCTT-GTTGAGCTCCTACA
TGTATTTAACACAATGGATATGCTCATATGCGCCTGGACATGTGTAAGAAAGAAGTATTTGGTGATGCTTCGCTAAGCTT
ACGTACCTGTGTACATGAAGTTTGTTAAACTATTTTCCAGCCATGAAATATTTCCAGCTTCCACTATGGTAGCCTGTGTA
GATGCATTTTTTTTTCTTGGATTGTTGTTTCTGGCTCCAGAATTGCAAGGCAAGCAACAATCTATCTAATGATGCTCGGC
AAGTGGAGGCTAAGATCTCAGGTAAATAGGAACTTGCTTCCATGGGATGGTGACCTAGTAGAACTAAGAGGACATCCAGA
GTTCCCTATTCAGGCATTCATTTCTAA--CAGGTTGCC--TTGCAC----ATTAACATAATAAACCCAAACTAATCTATG
CAC--AACAAGAAGCATTATGAGTAGCAATGCAGTAACTGACGGTATACACCAATTGCAGTCAAATTCTTGTTGTGAATA
CCAAGGTGATTGTT-------TGATCAGACAAGCAACTACAAGTGGTGTGACCAAAACAAAAGGAGACACTTAGCCTAGC
ACAATTCTGCATAGATACAGGTCTATGCAATCCTATATGTACCTCCCTAGTCTGATCTGTTGGGGGATGTACTCCTGCGA
CAGAAACGAAATGGAACTTGCTGACAATGCTTCAATCTCAAACTTGACACCCATTTCCAGCATGGCTTCCAACTTCAACC
TGCCAAGGATTATATAGTCATGAATATTTCAGGAAGAAAAATCTTCAGGAAAAAGAACCGGCTATTAACTACACAAATGA
TTCTAATTTTAAACACAAACCCGTTGACTTTAGAACTGACCAGGTGAAAGCAGTCATAAACCTTTTGGAACAGTGGAGCA
CCTACTGCCATTA-GAGTCGGCAAGGTGA
>chr5A_16
---------------TCAGCCCCACGCGGCGCCAACACGTAG----AGAT-----CCGGCGTGGCGCGTGCGTGCGTCTC
--CATCTCTGCCCCTCAGCTCGGGCCGACAAAAAGG----CAACGCGGAGTGGGAG---------------GAGCAGGAG
AGCTCGAGGGAAGAAGAAGAAGAGGAGGAGGAAGAAGGCCCCCTCAAACCC--A--AAA--GCGTCGCCCAGCTTCCGTC
G------GCCGGAGGGAGGTAAGGG---ATGAATAATCTCTGTCTTCTGAGCTGTGCTCTGCTCTTTGCTTGCTTCGTGC
GAATGCCCGGAGCTGCCACAGTTGCCTTTCGAATTCTGTAGCTGCATCACGAGTAGGAGTAGATGGTCCTGCTGTATGCT
AATAGCAGAGGGGAATGCTTCCCCTGCTCGTCTCACTTTGCTCTTC-ACGACCCATCTCATCTCCACCAC----------
-TTTGCTTCTCGGTTTCATCCC-TGGGTTGCAGATTAACCTAGCTGTAGAGATCCGATCTGAACCAGTAGCAGTGCGACT
TTGTCCACAAAGAAAGCGACAGAATAGGTAACAGGAATTGGCCCTTATTTTTTTATAGGAGTAGGAGTGTTAGATAAGA-
-----GAAGAATTCTGTGCCTAAATGCCTAGAAAGTCAAAAAGATCAGGAATTCAATACAACAGCCAAGGAATTGGTCCT
TAAATTTGACCAAATTTATTTTGCCTGCCTCTCGTTGACATGCAGTCGAATAATTTGATGCTTTGAGTGATGGTGGTGGG
AAATTCCCGTGTCAGCTAGGACACGTATAATTCACACAAGCTGAGAGGAATAAAGTTTCCCGGTGGTTCATGCAATTCAG
TGCATATCCACCGTCTTGCCTTATTCTTTACCTGATATTTAATGAGCTTCTAAACTTCTTCCTCGCATATCTGTAAAACC
ATACTGTAACGTGTGCCATTCTCTGAATCATAAGGTTTCAATTGCGACGTCAATTCACAACAAATCCAGCATAAGCCAAT
GTCTGACAACAGTATTCAGCGAGCATTGCTATCTGATAACCCCGATGCCAATGTGCTCCAAAGAAAGCCGTCGCAAGGAG
CCAAGCGGTTCCGGAGATGCAGGTCGGCTCCCAGATCAGAGACCGATGAAAAACCACAAGAAAATGGCTTGTCGCTTCCA
GCCAAGGAGTTGTTCAGCGTGGTGCGGCCGAGCTTCAGACTAGTAGGGTTCCTCCTATTTCTCTACCTGCTAGCGGGCGT
CGTCATCTTTTACCTTGTCATGGATCAGTTATCTGGCAAGAGAACCAACAGAGTGCTTGACGCACTGTACTTCTGCATTG
TCACGATGACATCGGTTGGCTATGGAGACCTTGTTCCTAACACAGACACGACGAAGCTGCTCGCCTGTGTTTTCGTCTTC
ACGGGCATGGCGATCATTGCTCTCTTCGTGAGCAAGTCAGCAGATTACCTCGTCGAGAAGCAGGAGGTGTTGTTCTTCAA
GGCACTGCACATGAATATGAAGTGTGGCGAGGCCAAAATGCTCAGGCAAATTGAGACAAACAAGACAAAGTACAAATTCT
ACACAGCCGCTCTGCTTCTTGTGACGGCCATTGTTGTGGGGACTGTTTTTCTCTGGAAGGTTGAGAAGTTGAGCCTTGTT
GACTCCTTTTATTGTGTCTGTGCCACAATCACTACCCTGGGTTATGGGGATAAAAGCTTCTCGTCCCAATTGGGGCGCAC
TTTCGCGGTATTTTGGATAATTACGAGCACCATAATTCTGGCGCTGTTCTTCATGTACCTTGCTGAGATCTACACCGAGC
GGCGGCAGAAAATGCTGGCCAAATGGGTTCTCACACGGAGAGTAACAACCATGGATCTTGAAGCGGCTGATCTGGATAGT
GATCGAAAAGTGGGGTAAGCACATAATGCGTTTTCAGTATTCTTCCCTCCATCATATCCCTTGAGATTTTGCAGGTAATG
AGCAATTGATGTTGATTTTGTGAACTTTGATATGTGCAGTGCTGCTGAATTTGTCGTGTACAAGCTCAAAGAACTGGGGA
AGATCAGCCAAGAGGACATATCTTCTTTTCTAGAGGAGTTTGACAAACTCGACGTTGACCAGTCCGGCACGCTCTCCACA
TATGACCTTACTCAGGCACAATCCGGTCAGTGACGAACATATGGGCTTGTACCTAATTCTACAGCTTAAATACTTTGGTT
GAATAGTCGGTTAATGCTGTTAATTAATTCTGTAATCTAGTAAA-GTGTTAAAAGATACGACCTC-GTTGAGCTCCTACA
TGTATTTAACACAATGGATCTGCTCATATGCACCTGGACATGTGTAAGAAAGAAGTATTTGGTGATGCTTCGCTAAGCTT
AAGTACCTGTGTACATGAAGTCTGTTAAACTATTTTCCAGCCATGAAATATTTCCAGCTTCCAATATGGTAGCCTGTGTA
GATGTATTTCTTGGAT-----TTGTTTCTCCTGGCTCCAGAATTGCAAGGCAAGCAACAACCTATCTAATGATGCTCGGC
AAGTGGAGGCTGAGATCTCAGGTAAATATGATTTTGCTTCCATGAGATGGTGACCTGGTAGAACTAAGAGGACATCCAGA
GTTT-CTATTCAGGCATTCACTTCTAA--CAGGTTGCC--TTTACACATTAATAACACAATAAACCCAAACTAATCTACG
CAC--CACAAGAAGCATTATGAGTAGCAATGCAGTAATGGAAGGTATACAGCAATTGCAGTCAAACTCTTGTTGTGAATA
CCAAGGTGATTGTTTGACGTATGATCAGACAAGCAACTACAAGTGGTGTAACCAAAACAAAAGGAGACTCTTAGCCTAGC
ACAATTCTGCATAGATACAGGTCTATGCAATCCTATATATACCTCCCTAGCCTGATCTGTTGGGGGATGTACTCTTGCGA
CAGAAACGAAATGGAACTTGCTGACAATGCTTCAATCTCAAACTTGACACCCATTTCCAGCATGGCTTCCAACTTCAACC
TGCCAAGGATTATATAGTCGTGAATATTTCAGGAGGAAAAATCTTCAGGAAAAAGAACCGGCTATTAACTACATAAATGA
TTCTAATTTTAAACACAAACCCGTTGACATTAGAACTGACCAGGTGAAAGCAGTCATAGACCTTTTGGAACAATGGAGCA
CCTACTGCTGTTA-GAGTCGACAAGGTG-
>chr1B_183
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------AAAAAGGCACCCTCAAACCCAGA--AAA--GCTTCGCCCAGCTTCCGTC
GGCCCGAGCCGGAGGGAGGTAAGGG---ATGATC--TCTGTGTCTTCTCAACTGTGCTCTGTTCTCTGCTTGCTTCGTGC
GATTGGCCGGAGCTGCCAGAATTGCCTTTCGAATTCTGTAGCTGCATCACAAGTAGAAGTAGATGCCCCTGCTGTATGCT
AGTAGCAGAGTGGAATGCGTCCCCTGCTCGTCTTACTTTCCTCTTTTACAATCCATCTCAACTCAAGGTTGGTTTCCAGC
ATTTGGCTCTCAGTTTGATCCCTTCGGTTGCAGATTAAGCTAGCAGTAGAGATCCGATCTGAACCAGTAGCAGTGTGACT
TTGTCCAGAAAGAAAGCGACAGAATAGGTAACTTG-------------TTTTTTATACTGTACTCC----TAGATAAGA-
-----GAAGAATTCTGTGCCTAAATGCCTAGAAAGTCAAAAAGATCAGGAATTCAAGATAACTGCCAAGGAATTAGCCCT
TATTT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------
>chr6A_2201
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----GTTGGTTAATTCTGTTAATTAATTTTGCAATCTAGTAAA-GTGTCAAAAGATACGACCTTTGTTGAGCTCCTACA
GATATTTAACACAATGGATCTGCTCATATGCACCTAGACATGTGTAAGAAAGAAATATTTGGTGATGCTTCACTAGGCTT
ATATGCCTGTGTACATGAAGTTTGTTAAGCTATTTTCCAGTCATGAAATGTTTCCAGCTTCCAGTATGGTAGATGCATTT
------TTTCGTGCAT-----TTGTTGCTCCTGGCTCCAGATTTGCAAGGCAAGCAATGACCTATCTAATGACGCTCGGC
AAGTGGAGGCTGAGATCTCAGATAAATAAGAATTTGCTTCCATGAGATGGTGACCTAGGAGAACTAAGAGAACATCCAAA
GTTTCTTATTCAGGCATTCACTTCTACTCCAGGTTGCCC----------TATTAACACAATAAACCCAAACCAACCTACG
CACCACACAAGAAGCATTGTGAGTAGCAATGCAGTAACTGACGGTATTCACCAATTGCAGTCAAACTC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>chr5A_2205
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GTTAATGTTGTTAATTAATTCTGTAATCTAGTAGA-GTGTCAAAAGATACGACCTTTGTTGAGCTCCTACA
TGTATTTAACACAATGGATCTGCTCATATGCACCTGGACATGTGTAAGAAAGAAATATTTGGTGATGCTTCGCTAAGCTT
ATATGCCTGTGTACATGAAGTTTGTTAAGCTATTTTCCAGTCATGAAATGTTTCCAGCTTCCAGTATGGTAGATGCATTT
------TTTCGTGGAT-----TTGTTGCTCCTGGCTCCAGAATTGCAAGGCAAGCAACGACCTATCTCATGACGCTCGGC
AAGTGGAGGCTGAGATCTTAGGTAAATAAGAATTTGCTTCCATGAGATGGTGACCTGGGAGAACTAAGAGAACATCCAAA
GTTTCTTATTCAGGCATTCACTTCTACTCCAGGTTGCCC----------TATTAACACAATAAACCCAAATGAACCTACG
CACCACACAAGAAGCATTATGAGTAGCAATGCAGTAACTGACGGTATTCACCAATTGCAGTCAAACTCT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>chr3A_2205
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GTTAATGCTGTTAATTAATTTTGTAATCTAGTAAA-GTGTCAAAAGATATGACCTTTGTTGAGCTCCTACA
TGTATTTAACACAATGGATCTGCTCATATGCACCTGCATATGTGTAAGAAAGAAATATTTGGTGATGCTTCGCTAAGCTT
ATATGCCTGTGTACATGAAGTTTGTTAAGCTATTTTCCAGTCATGAAATGTTTCCAGCTTCCAGTATGGTAGATGCATT-
------TTTCGTGGAT-----TCGTTGCTCCTGGCTCCAAAATTGCAAGGCAAGCAACGACCTATCTGATGACGCTCGGC
AAGTGGAGCC-GAGATCTCCGGTAAATAAGAATTTGCTTCCATGAGATGGTGACCTGGGAGAACTAAGAGAACATCCAAA
GTTTCTTATTCAGGCATTCACTTCTACTCCAGGTTGCCC----------TATTAACACAATAAACCAAAACTAACCTACG
CACCACACAAGAAGCATAATGAGTAGCAATGCAGTAACTGACGGTATTCACCAATTGCAGCCAAACTCT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>SNPs
S-----------S---------------------------------SSSSSSSSS---------S---------------
SS--------------S----------------------------------------------S----------------
-----------------------------------------------------------SS-------------------
-------------------------SSS--S---------------------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
----------------------------------S---------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
------------S----------------------------S--------------------------------------
--------------------------------------------------------------------------------
------S-----------S-----------------------S-------------------S------S-----S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----S-----
-S------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S---------------------------S--------------------------
-S--S---------------------------S-----------------------------------------------
-----------------------------------------------------S--------------------------
---------------------------------------------------------S-------------S--------
--------S-----------------------------------S-----------------------------------
----------------------------------------S---------------------------------------
------------------------------S----------------------------------------------S--
-----------------------SS------------------------------------S------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S------------------------S-
-------------S--------S------
>forward_50
------------------------------GCCAACACGTAGAGATCCGG------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------
>reverse_1395
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------CCCTAACACAGACACGACGA--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>forward_51
-------------------------------CCAACACGTAGAGATCCGGC-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_1536
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------CATGAAGTGTGGCGAGGC-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>forward_1116
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TCCAAACAAAGCCTTCGCAG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------
>reverse_2134
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------ATTGACCAGTCCGGCACG---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>forward_1536
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TCAA
GGCACTGCACATGAAC----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
>reverse_3003
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------TTTGACACCCATTTCCAGCA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------
