>input_sequence_59193
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ATATGAGGCTCGTGGCAGTAACTCTAGGTGGCACCTCCAA-CCCGATCGATCAGTACGCGCCTGAAGCTAGCTATCTAGG
TACCGTTTGATCGCCCGGCCCGGGAAACCAAGTTAAACGTAGCACGCGAGAGACATGGCGAGCAGGCCAGAATCGTCAGC
AGCGAAAGCCGCGGCGGCCGACTTCGATCCCGTGTACGAGTGGGTCGACGGCGACGGCAGCTATCTCCTCCGCCTCAACC
TCCCAGGTACGTACGATGCGCGTTCGTGATTCCTGCT----GAGATGGATGAAATGGTGTTCCCCTGAACCCGAA-----
--------TTAACCTTTGCAGCTGTACTGTACTGTACCTACTGAATTGTACGTATGACATTATGTTGATGATCAAGGGTT
CAAGAAGGAGGACTTCCGGGTGCACGTGGACCCCGCGGGCCGCCTGACCATCCTCGGCCACAGAACGGCGGACGCCGGAG
ATGGGAACGTGCGGCTGCACAGGGTGTTCCAGCTGCTATCCACATCCGACCTCGACGCAATCACCGGCCGGTACGACGCC
AACGTGCTCACGCTCACCGTGCCCAAGCTGCCTTCCGCCCCGGCCCCGCCCCCGCCCAGTGAGAATGAGGCCTCGGACGC
TGTCGGCGACGAACC------GACGGATAAGAAATCCAAGGTTAGCCAGGAGGCGGAGCGGCTGATCGAGGCGGTGAGGG
CAAGGTTG---CAGGGGAGGCACAAACAGGAGACGGCCAAGGACCAAACTGCAGCGAGTAGCAAGGAACCCCCGGCCATG
AAAGTGGACGACAGGAAACAGGAGCCCAAGGCAG---------CAGAAAAGGTGGTGAAAGGAGATGATGATCAGGACCA
CAAGGAGAAGCTTGAGTATGAGGCGGC------------GACGCAGAGGGAGAAGAAAGGCTGCTGGAAGGAGCGGGCGC
CCGAGGAGGGGTTCAAGTGGGCGGATACCATAG---GTAAGAACAAGGAGGTGATCGCCGCCACCGCGGTCGCCGCCTTC
ACGCTAGGCGTCTTCGTCTCCCATAGGCTCTTCTCCAGAAACTAGAG---------ATCACTGCATGTAAATGCAGCGTC
CGTTGTGCTGCTGCGTGCGTCCACCTAATAACGAT---ACAAGCGGATGTACTACGACCGTAGCTGCCGAGATAAATATA
TATACGTGAGGA--------------------------------------------------------------------
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>chr3A_1_TraesCS3A01G210500
ACTTAGTAAAGTCACATTCTAGCACCGCTGTTGGAGCAGAGCTGTCCCACAACTTCCCAAGGAACGAGAGCACATTGATA
TTTGGATCACAGCACTCATTGGACCCGCACACCAGTGTGAAGGCACGCTTCAACAACTATGGCATGGCTAGTGCCCTTGT
CCAGCATGAATGGCGAGCCAAGTCACTCGTTACCATCTCCGGCGAGGTTGACACCAAGGCAATTGAGAAGAGCACAAAAG
TTGGTCTGTCATTGGTGCTAAAGCCTTGAGATGCACAGCTGGGACCCTATGTTTTGAAAAAAAAG--GTTCAGTTCTGCT
GGATTGGAATAACATGGCCCCAGGTCATCTCTTCGTGCTTTCATTTTGATCTTGAATTCCTCCTTTGTCCACATAATCTG
TTTCCTAGGCAAATGTTAGCCTTGACCTCCTCGTTATTTTGATTTGATCATCAGCGCCTGTCAATAATTTCTGGTGATTA
AGACCTATTGTGAATCTTGTCAAATGTGACAGATTGGCGGTTACAGACAGTGTGTTCAATTCATTCATTGATGCCCTTGT
TCCAGTTGATCCATTTGATGTGTGAGTAATTAATCCTCTTGGATGCATGCTTAGTA------------------------
------------------------------------------------------------GTACTAACATTGTTTGAGGA
GCTGCGTGTTGTGGTATTA-------------------------------------------------------------
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--------CTAGTAACGACTTATAAGAAGCT-------------------------------------------------
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----------------------AAAGAACAAAACCTGGGAAAAGAGT-TGTCATACCTGGGATAAACTGTTTATGTGAGG
TATGAGACGTGGAGAGAAAGTTAAAAAATGTCTTGAGTTCTTTTGTTTCTTCGGTGGGACGGAGCTAGTACAGACGTTAC
CCTGGCGCGCGCCCAAAGTTTAATGAGCCCAAGACACGTTACACGTCTACTAGGAGGAGGAGATGGAGATCCCCAGGCTA
GACCCTCACGATAAATTTTCCTTGTGCCAGACCAGCCCCTCAAGAAAAGCTTGGAATAG-TTTAGCGTTACCAGCGCAAG
GAGGCAAGCGCTGCGTACATACATGATGCTAT------------------------------------------------
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ATATGAGGCTCGTGGCAGTAACTCTAGGTGGCACCTCCAA-CCCGATCGATCAGTACGCGCCTGAAGCTAGCTATCTAGG
TACCGTTTGATCGCCCGGCCCGGGAAACCAAGTTAAACGTAGCACGCGAGAGACATGGCGAGCAGGCCAGAATCGTCAGC
AGCGAAAGCCGCGGCGGCCGACTTCGATCCCGTGTACGAGTGGGTCGACGGCGACGGCAGCTATCTCCTCCGCCTCAACC
TCCCAGGTACGTACGATGCGCGTTCGTGATTCCTGCT----GAGATGGATGAAATGGTGTTCCCCTGAACCCGAA-----
--------TTAACCTTTGCAGCTGTACTGTACTGTACCTACTGAATTGTACGTATGACATTATGTTGATGATCAAGGGTT
CAAGAAGGAGGACTTCCGGGTGCACGTGGACCCCGCGGGCCGCCTGACCATCCTCGGCCACAGAACGGCGGACGCCGGAG
ATGGGAACGTGCGGCTGCACAGGGTGTTCCAGCTGCTATCCACATCCGACCTCGACGCAATCACCGGCCGGTACGACGCC
AACGTGCTCACGCTCACCGTGCCCAAGCTGCCTTCCGCCCCGGCCCCGCCCCCGCCCAGTGAGAATGAGGCCTCGGACGC
TGTCGGCGACGAACC------GACGGATAAGAAATCCAAGGTTAGCCAGGAGGCGGAGCGGCTGATCGAGGCGGTGAGGG
CAAGGTTG---CAGGGGAGGCACAAACAGGAGACGGCCAAGGACCAAACTGCAGCGAGTAGCAAGGAACCCCCGGCCATG
AAAGTGGACGACAGGAAACAGGAGCCCAAGGCAG---------CAGAAAAGGTGGTGAAAGGAGATGATGATCAGGACCA
CAAGGAGAAGCTTGAGTATGAGGCGGC------------GACGCAGAGGGAGAAGAAAGGCTGCTGGAAGGAGCGGGCGC
CCGAGGAGGGGTTCAAGTGGGCGGATACCATAG---GTAAGAACAAGGAGGTGATCGCCGCCACCGCGGTCGCCGCCTTC
ACGCTAGGCGTCTTCGTCTCCCATAGGCTCTTCTCCAGAAACTAGAG---------ATCACTGCATGTAAATGCAGCGTC
CGTTGTGCTGCTGCGTGCGTCCACCTAATAACGAT---ACAAGCGGATGTACTACGACCGTAGCTGCCGAGATAAATATA
TATACGTGAGGAATAAATTCTCGTCAACGAGTTTAATGATACTATCACG--TACGTACATGACTAAAATATA---CATGA
AACTTCAAAATAAAATGGTACTATCACTTGCTCCCGCTGTAAAGAAATTGGTAAACGCTCTTATATTTCTTTACGAAGGG
AGTACATGCGTAAAATATACTCGCATGGCCATCTTATTTTTCATAGTCCTGCATTTTCATGATTTATTTCTTTTTTTATG
TAAGGTACAAAGCCAGGAGGCTTAGGAAAATACACAGTAGTTAACGACGGTGCCCAACAATTTCCATGTCCTTACTAAGC
TGCACAAGTTCCATTTGATAATGCAGTAAGAGA------G----TTTTGCCAACAAACCATTTGATATCTTGGGTGTACA
TTTTACATTGCCAACAAACTGCACAAATAGTGCCACCCACTACGAAAATAAACATCATCATTTATTTAATTTACCGTACA
ACTGCGCCTTTTATTTT-ACTACAAAAACAAATAATGATACACTACTCCAGGTCTAGCTTTTCAGCCGCGTAGAAAGAGG
AACAGGGGTAATAACAAATCATGAGCTTGTAAAGTGTGCAATCGATTGTGCCATCATCAGAGCAGGCCTTTTGTACAACC
ATATGCACAGTAAGA--GGGCGATTAAAAGATCGGCACGACACTGTCGTGGACCCTGTTCTTCTGGTTCTGGGCAACGCA
TTCCGAGATCCACATCAAGTTCCTTATCTCCTGCTCTCGTAGCCTCATGTATGCGAAGAAAACGGCGTAGTGGAACTGCA
CA---AAC---AAGAGAACATCAGAGCTCCCGCCTTCAATTCTAGAGTT-------------------------GAGGTC
CAAAATAGTGGCACACA-----------------GAGACAATAAAACTCACCAACAGGCACTAGCACT-ATGGCATTTTT
TTAAAACTATCGGGCACTCACAAGTT--TCAAATAGAGTAATGACTAACGATGGATCTATAGAATCATGTGCAAAGCCG-
---TGGCTGGTTAGCGCATATTTTACAAGCATGTATGCATGCATC
>chr3D_1
ACTTAGTAAAGTCACATTCAAGCACTGCTGTTGGAGCAGAGCTGTCCCACAACTTCCCAAGGAACGAGAGCACATTGATA
TTTGGATCGCAGCACTCATTGGACCCGCACACCAGTGTGAAGGCACGCTTCAACAACTATGGCATGGCCAGTGCCCTTGT
CCAGCATGAATGGCGACCCAAGTCACTTGTCACCATCTCCGGCGAGGTTGACACAAAGGCAATTGAGAAGAGCACAAAAG
TTGGTCTGTCATTGGTGCTAAAGCCTTGAGATGCACAGCTGGGACCCTATGTTTTGAAAAAAAAAAGTTA-AGTTCTGCT
GGATTGGAATAACATGGCCCCAGGTCATCTCTTTGCGCTTTCATTTTGATCTTGAATTCCTCCTTTGTCCACATAATCTG
TTTCCTAGGCAAATGTTAGCCTTGACGACCTCATTATTTTGATTTGATCATCAGCGCCTGTCAATAATTTCTGGTGGTTA
AGACCTACTGTGAATCTTGTCAAATGTGACAGATTGGCGGTTACAGACAGTGTGTTCAATTCATTCCTTGATGCCCTTGT
TCCAGTTGATCCATTTGATGTGTGAGTAATTAATCCTCTTGGATGCATGCTTAGTA------------------------
---------------------------------------------------------------CTGACATTGTTTGAGGA
GCTGCGTGTTGTGCTAT-AGTGGTAACGATTTAT----------------------------------------------
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----------------------TAAGAAGCT-------------------------------------------------
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----------------------AAATAACAAAACCTGGAACAATAGTCTGTCATACTTGGGAT-----------------
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>chr3B_1
ACTTAGTAAAGTCACATTCAAGCACTGCTGTTGGAGCAGAGCTGTCCCACAACTTCCCAAGGAACGAGAGCACATTGATA
TTTGGATCGCAGCACTCATTGGACCCGCACACCAGTGTGAAGGCACGCTTCAACAACTATGGCATGGCCAGTGCCCTTGT
CCAGCATGAATGGCGACCCAAGTCACTCGTCACCATCTCCGGCGAGGTTGACACCAAGGCAATTGAGAAGAGCACAAAAG
TTGGTCTGTCATTGGTGCTAAAGCCTTGAGATGCACAGCTGGGACCCTATGTTTTGAAAGAAAAAAAGTTCAGTTCTGCT
GGATTGGAATAACATGGCCCCAGGTCATCTCTTCGCGCTTTCATTTTGATCTTGAATTCCTCCTTTGTCCACATAATCTG
TTTCCTAGGCAAATGTTAGCCTTGACGACCTCATTATTTTGATTTGATCATCAGCGCCTGTCAATAATTTCTGGTGATTA
AGACCTGTTGTGAATCTTGTCAAATGTGACAGATTGGCGGTTACAGACAGCGTGTTCAATTCATTCCTTGATGCCCTTG-
TCCAGTTGATCCATTTGATGTGTGAGTAATTAATCCTCTTCGATGCATGCTTAGTACTCCCTCTGTAACTAATATAAGAG
CATTTAGATCATTGAAGTAGTTAAGTTATCTAAACGCTCTTATATTAGTTTACGGAGGGAGTACTAACATTGTTTGAGGA
GCTGCGTGTTGTGGTATTAGTGGTAACGATTTAAGCTAAAAAGCCCCTTACACGGCGCCCAAGAATCTGCTCACGACTGG
GTCTATTTTCGCACGGCGCAGGGTATCGACGACGGCAGTGGCGAGAGCTCCTCCGTGTGTGTGTGTGAGTGAGTGATTGC
TCGGCTTGCTAGTAACGAGGGTAAGCGTATGGCCATGGCTCCCGCGACACCGCGCCCGCGGCCGGCGGCGCCGCGTTGAT
CTCCCTCCTCCGGCCGTCATTTCAACCGCCGAGACCAGATCTGGGCTGCTCTCCGCGTCGTCTCTCAGCTGCACTCCCTC
TCCCCTTCAGGCTCTCGAAGCTCTGCTCATGGCCCTCGTGTCCGCGTCGTCATCTCCGACTCCGTCGGAAGCACTGGCCG
CGGCTGCTCTTGCCTCCCGCATGGCCGCCTCGGCAGCTGGCGGCCGTCTGTCCCGTGCTGGGCTCCCGCCGAGGCCAGAT
GTGGCAGCACCTCCGATGGCGCAGTCGGGCATGCGCTCTCTGCCTCGCCCCCGGCTTCCTCCGACCGGTGTCGCCGCGTT
TTCCGCCCTGGACGCGGCGCGTGCTGCTCCAAATCGTGCTCCTGGCCTGCTGGTTGGAGGGCTTGGATCCCCTGCCTCCG
CTGACTCTGCTCCTGGCATCACCACGCCGTCAGCCCCAAATTTTTTTGTGGGCGCATCGTCCCCAACTCCTGCCAGCATT
GCTACGGTGTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGTTGCTGATGCGCCATCCACAACTCCGGTT
GGCAACACCGCATCATCCACGACTCCGGCTGGCACCATCGCACCGTCCTCGACTCCTGTAGAAGTGGCGCCATCCCCAAC
TCCTGTCAGTGTTGTGCCGGGTCTGAACAAGGCGTGGCATGTTTCGTGGAGCTTCCTTACCGACGATGAAGATGACGAGG
ATGATGATGTGCTGGCCTCGCCGACTCCGCCGCCGGCTTCTAAATCCTCAGTTTCGGCAGCTCGGCCGGGCATGGCATGT
GATGCGGATTCATGCAGTGGTTGGGAAAAGGTGCTGCCGCGATGTAACGTGCAATGCCCGGTGTCACTAGGCCCTGCACT
GGCTCCCCGTCCTATCCCCGCTTGGCTTCATGGTAGATGTTGCAGATGCCTCTATCCTGGACACCGTGCAGCGGAGTGTT
GAGATCCTTTTAGGTGTTCTCGATGCCTTGAGAATGGTCATCAAGCGTGTGGGTGCCGCAATGCCTGGTGTCCCCTCAGC
TTTTTGGGAAGCCCTACTTTGTCGCCATTGCCCCGCCTCCCTGTCGGACACCAACAAGCTTCAGTTCCTCGTAAGGTCCA
GAAAGATGTCGTGCCCCTCTCGAAGACGTTTGGTCATGATTCTTGGGCATCGATCGTTGTTGCTCCTGTTGGCTTTGTGG
CCTCGGCGATATCCCAGTGCGGCCTGCCTTGGAGAGGCAGGCCGAGCTGTTGCGCTCTGAGCTCCTTGATATGGCTTCCT
TCCGACTTGAGGAGACGGTCCAGCCTCTGCGTGATGTCGTTGACTCCATGCAAGGTTGGATGTTGCGGATGGAGAGCTTC
ATGGAGCGAGTTGAGGCTGCACTAGGAGGGCTCTCCTTGGCACCGCCTGTGTTGCAGAGTGCTCATGTGTTGCGCCCTTT
GGTTGTGCCTGATGGCAGCTTCGAGGTTGAGAGGGGAGACGAGCTTCATGGTTGCTTCTCCCCTCGTGCTAGAGCCAGCT
CGCCGTCGTCGGCCTATGAGGGTCTAGGCAATGATGTGGTTGTGACTCCGGTGTTGTAGATCATGCCTGAGCTTCAGGAG
CTGTGTGGGGGCTCGGTTCTGCCTCTGTCCGTCGAACAACCGAAGGTAGACCCTCCTGAGATCTCAATTGTGGCTTTGTC
GCCAGCATCACCCCTGGAGTCTAGCCAGATACTTGATGCTGAGGAGTGTGGTGATTTGGATGCTTCAATCTCTCGATCTC
CTAAGTCCATTGGGTGTCAGGCGTCAACCAGTCTACCCTTTGGTGTCATGGAGCACGGAGTTTTGGATGTTGCTGATGTT
CCCTCGTTTGCAACCATGGAGCAGGTGATGCCTGTGAGTGACATGACCATTGAGCCAAGTGTGTTGGCACCTACTCCAAA
TCTAGATGCTCTCTTTGCGAAGGAACTTTGTGACTTACTCGCCAGTGTGGAGGTTGGTAGACCTGGTTTGGGTAGGTCGA
TTGCTTGCCCCTTGACGGGGACACCAAAAAGGGCCAAACAAAAGAAGGTGGGCAAAGGAAAGAGTGGCGTCATGGGCAAG
GCGTCTCTCTCTCGCTGCTTGATGGATGCCATTCGATCTCTCGGCCTATCCGTTTTGATTGGGTTGTTATTGTGGGTTGG
GAGGTGCCTGATGTCTTGTGTCGAGTTGTTTTTGTCGGGGGTCTCTTGGCGTAGTAGCAATGTCGGGGTTTGTGGATGTT
GTGTATTCAGAAAGCCTGGGAGGGACCGCATGTGCTGTTGTGGGGTTTCTTGCCATGTGAGGAGTTAGTCCGTGCTTCAT
TTGTATTGGTTTTCGCCCGGTTTTCCGTAAAATAACTGGGCAATTCTCTTCTTCTTAATTAATCGACGAGGCAAAACTTT
TGCCTCCGTTTTGAAAAAAAGAAAAGAACGAAACCTGGAACAATAGT-TGTCATACTTGGGATAAACTGTTTATGTGAGG
TATGAGACATGGAGAGAAAGTTAAAAAATGTC--GAGTTCTTTTGTTGCTTCGGTGAGACGGAGCTAGTACAGACGATAC
CCTGGCGCACGCCCAAAGTTTAATGAGCCCAAGACACGTTACACGTCTA---GGAGGAGGAGATGG-------------A
GATCCCCACGATAAATTTTGCTTGTGCCAGCCCAACCCCTCAAGAAAAGCTTGGAATAG-TTTAGCGTTACCAGCGCAAG
GAGGCAAGCGCTGCGTACATGATGCTATACTAGCAAAAGAGCCTGTGCGTTGCAATAGGAAAGAAAACATAACACACATT
TTTAGCCCAACAACCATCACTCAAGACCACAATAGGTCTATCTTCTTTATTTTTGCGAGGCATCATATTTGTGTTGCCGC
TTATCCTCCTTCTCACCCTCGCCGGCGATGGCCTCGGTGTTCACACAAAACAAAAAAAACATGTTTGAATATGTTTAATC
CTAAGGCGTCTCTCCCTCCCTCCCTCCCTCCCTCTCTCTCTCTCGCTTTCTCTCACTCTCTCGATGAGAAATCTGTTGTT
TTCCCTGCGACATTTTTCAGAGGTATGCATGTGTAGTTATTGATGTTTTCTTTTCCCTATATTGTTACAGTGGGGTGTTT
ATTTGCAATCCAGGTCGCCGCCGGTACGAAAGGAAAACGGATCTTACACTATAAATTATAAGTTTGCTCCAAAAATAATA
TTTTAAAAATATTTAAAAGGTAAAATTAACATCATATTTAGTTTCCACATACTTTTCTAATAAAATTTCATATATAATAT
GTTAAAATAGAAGTTACGGTTTAAAAGATACAGATAATTTAGAAAATCATTTGTTTGACTTAAATATATTCTAAAATAAT
ATTTATAAATACTTAATTGGTGAAAATAATCTCATATTCATATTCTACATGTTTTTCTAATCAAAGTTCATATATAACAT
GTTCAAATCGGAGTTACGGTTTAAAAGATATGGATGATTTAAAAAAACATTGTTTGACTTAAATATGATCCGCGGATGAA
TTACCTAAAACATCAGGGGGGTTTTCAGAAAATGTAAAATAACGGTTCGGGTGTGACTTAAATCCGGACTGCGGGTTGAT
TTCAACAAAACGCAGGGACTTTTGTGTAAACTATAAAAAAACGATCCGTTTTAACTTAAAAGAGGGCTGCGGGTTGAATT
CTCTGAAATAGAGGGACTTTTCTAAAAAATGCCATGACGGACGAAAGAAACCTAATTTGCTTTATTATTATTAGGTAAAG
ATATGAGGCGCGTGGCAGTAACTCTAGGTGGTACCTCCAAACCCGATCGATCAGTACGCGGCTGAAGCTGGCTA----GG
TACCGTCTGATCGGCCGGCCCGGGAAGCCAAGTGAAAC-------------GACATGGCGAGCAGGCAAGAATCGTCAGT
CA---------CGGCGGCCGACTTGGACCCCGTGTACGAGTGGGTCGACGGCGACGGCAGCTATCTCCTCCGCCTCAACC
TCCCAGGTACGTACGATACGCGTTCGTGATTCCTGCT----GAGATGGATGAAATGGTGCTCCCCTGAACCCGAA-----
--------TT-----------------------GTGCCTACTGAGTT----GTCTGCCATTATGTTGAT---CAAGGGTT
TAAGAAGGAGGAGTTCCGGGTGCACGTGGACCCCGCGGGCCGGCTCAACATCCTCGGCCACAAAACGGCGGATGGCGGAG
CTGGGAACGTGCGGCTGCACAAGGTGTTTCAGCTCC-ATCCACATCCGACCTGGACGCAATCACCGGCCGGAACGACGCC
AACGTGCTCACGCTCACCGTGCCCAAGCTGCCTTCCGCCCCGGCCGCCA---------------------------ACGA
CGTCGGCGACAAACCTGTTGGAACGGATGAGAAATCCAAGGTTATCCGGGAGGCGGAGCGGCTGATCCAGGCGGCGAGGG
CAAGGTTGCAGCAGGGGAGGCACAAAGAGGA------------------------------------------------G
AAAGTGGACGACAGGAAACAGGAGGCCGAGGCAACGACGCCGGCAGAAAAGGTGGTGAAAGC---------TCAGGACCA
CAACGACAAGCTTGAGTATGAGGCGGC------------GACGCAGAGGGACAAGAAAGGCTGCTGGAAGGAG-------
--------GGGTTCACGTGGGCGGATGCCATAGGTCGTAAGAACAAGGAGGTGATCGCCGCCACCGCCGTCGCCGCCTTC
ACGCTAGGCGTCTTCGTCTCCCATAGGCTCTTCTCCAGAAACTGAAAATCATCATCATCTCTAAA---------------
---TGTGCTGCTGCCTGCGTCCACTTAATAACGATTACACAAGCGGATGTACT---------------------------
----------GAATAAATTCTCGTCAAGGAGTTTAATGATA---------------------------------------
----TACTATCACA------------------------------AAATTGATAAACGCTCCTATATTTC-----------
-------------------------------------------------------------------TTTTTTTTA----
TAAGGTGCAAGGCCACGAGGCTTGGGAAATTACACAATAGTTAACGACGGTGCCCAACAATTTCCATGTCCTTTCTAAGC
TGCACAAGTTCCATTTGATAATGCAGTAAAAAAGAGTTTG----TTTTGCCAACAAACCATTTGATATCTTGGGTGTACA
TTTTACATTGCCAACAAACTGCACAAATAGTGCCACCCACTACGAAAATAAA---CATCATTTATTTAGTTTACCGTACA
ACTGCGCCTTTTATTTT-ACTACAAAAACAAATAATGATACACTAGTCCAGGTCTAGCTTTTCAGCCGCATAGAAAGAGG
AACAGGGGTAATAACAAATCATGAGCTTGTAAAGTGTGCAATCGATTGTGCCATCATCAAAGCAGACCTTTTGCACAACC
ATATGCACAGTAATAGGGGGCGATTAAAAGATCGGCACAACGCTGTCGTGGACCCTGTTCTTCTGGTTCTGGGCAACGCA
TTCCGAGATCCACATCAAGTTCCTTATCTCCTGCTCTCGTAGCCTCATGTATGCGAAGAAAACAGCGTAGTGGAACTGCA
CAAACAAC---AAGAGAACATCAGAGCTCCCACCTTAAATTCTAGAGTTCACCCGAAAAAAAAAAACTAGAGTTGAGGTC
TGAAATAGTGGCACACAGAGCTCACAAGTTTTCTGAGACAATAAAACTCACCAACAGGCACTAGCACTTATGGCATTTTT
TTAGAACTATCAGGCACTCACAAGTTGTTCAAATAGAGTTATGACTTAAGATGGATATATAGAATCATGTGCAAAGCCGT
GGCTGGTTGGTTAGCGCATATTTTACAAGCATGTATGTATGCATC
>chr3D_799
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-----------------------------------------------------------------TAGTACAGACGATAC
CCTGGCGCACGCCCAAAGTATAGTGAGCCCAAGACACGTTACACGTCTA---GGAGGAGGAAATGGAGATCCCCTGGCTA
GACCCCCACGATAAATTTTCCTTGTGCCAGCCCAGCCCCTCAAGAAAAGCTTCGAATAGTTTTAGCGTTACCAGCGCAAG
GAGGCAAGCTGCG------TACATGATGCTAT------------------------------------------------
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ATATGAGGCGCGTGGCAGTAACTCTAGGTGGCACCTCCAG-CCCGATCGATCAGTACGCGGCTGAAGCTAGCTA----GG
TACCGTCTGATCGCCCGGCCCGGGAAACCCAGTGAAAC-------------GACATGGCGGGCGGGCAAGAATCGTCAGC
CGT---------GGCGGCCGACTTGGACCCCGTGTACGAGTGGGTCGACGGCGACGGCAGCTATCTCCTCCGCCTCAACC
TCCCAGGTACGTGCGATGCCCGTTCGTGACTCGTGCTGAGTGAGATGGATGAAATGGTGCTCCCC-GAACCCGAATTAAG
CTTTGCTGTT-----------------------GTACCTACTGAGTT----GTGTGACATTATGTTGAT---CAAGGGTT
CAAGAAGGAGGACTTCCGGGTGCACGTGGACCCCGCGGGCCGGCTCAACATCCTCGGCCACAAAACGGCGGATGGCGGAG
CTGGGAACGTGCGGCTGCACAAGGTGTTTCAGCTGCCATCTACATCCGACCTCGACGCAATCACCGGCCGGTACGACGCC
AACTTGCTCACGCTCACCGTGCCCAAGCTGCCTTCCGCCCCGGC---CA---------------------------AGGA
CGTCGGCGACAAACC------AACGGATGAGAAATCCAAGGTTATCCGGGAGGCGGAGCGGCTGATCGAGGCGGCGAGGG
CAAGGTTGCAGCTGGGGAGGCACAGAGAGGAGACGGC------------------------CAAGGAACCCCCGGCCACG
AAAGTGGACGACAGGAAACAGGAGCCCAAGGCAA---------CAGAAAAGGTGGTGAAAGGAGATGATGGTCAGGACCA
CAAGGAGAAGCTTGAGTATGAGACGGCGACAGAGACGGAGACGCAGAGGGAGAAGAAAGGCTGCTGGAAGGAGCGGGCGG
CGGAGGAGGGGTTCAAGTGGGCAGATACCATAG---GTAAGAACAAGGAGGTGATCGCCGCCACCGCCGTCGCCGCCTTC
ACGCTAGGCGTCTTCGTCTCCCATAGGCTCTTCTCCAGAAACTGAAAATCATCATCATCACTGAATGTAAATGCAGCGTC
CGTTGTGCTGATGTGTGCGTGCACC---TAACAAT---ACGAGCGGATGTACGACC----TAGCTGCCGAG------ATA
TATACGTGAGGAATAAATTCT-------------AATGATACTATCACGCGTACGTACATCACTAAATTATAGTACATGA
AACTTACTATCACATAC---------------------------------------------------------------
----------------------------------------TCGTAGACCTGCATTTTCATGATCTATTTTTTTTTA----
TAAGGTGCAAGGCTAGGAGGCTTGGGAAAATACACAATAGTAAACAAA---GCCCAACAATTTCCATGTCTTTTCTAAGC
TGCACAAGTTCCATTTGATAATGCAGTAAAAGA------GTCTGTTTTGCCAACAAACCATTTGATATCTTGGGTGTACA
TTTTACATTGCCAACAAACTGCACAAATAGTGCCACCCACTACGAAAATAAA---CATCATTTATTTAGTTTACCGTACA
ACTGCGCCTTTTATTTTTACTACAAAAACAAATAATGATACACTACTCCAGGTCTAGCTTTTCAGCCGCGTAGAAAGAGG
AACAGGGGTAATAACAAACCATGAGCTTGTAAAGTGTGCAATCGATTGTGCCATCATCAAAGCAGGCCTTTTGTACAACC
ATATGCACAGTAATAGGGGGCGATTAAAAGATCGGCACGACGCTGTCGTGGACCCTGTTCTTCTGGTTCTGAGCAACGCA
TTCAGAGATCCACATCAAGTTCCTTATCTCCTGCTCTCGTAGCCTCATGTATGCGAAGAAAACGGCATAGTGGAACTGCA
CA---AACAAGAAGAGAATATCAGAGCTCCCACCTTAAATTCTAGAGTT-------------------------GAGGTC
CGAAATAGTGGCACACAAAGCTCACAAGTTTTCTGAGACAATAAAACTCACCAACAGGCACTAGCACTTATGGCATTTTT
TTAGAACTATCGGGCACTCACAAGTTGTTCAAATAGAGTTATGACTTAAGATGGATCTATAGAATCATGTGCAAAGTCG-
---TGGCTGGTTAGCGCATATTTTACAAGCATGTATGTATGCA--
>SNPs
-------------------S-----S------------------------------------------------------
--------S-----------------------------------------------------------S-----------
----------------S-------------S-------------------------------------------------
----------------------------------------------------------------S---------------
-----------------------------------S--------------------------------------------
--------------------------SS----S-----------------------------------------------
------------------------------------------------------------------S-------------
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------------------SSSS----------------------------------------------------------
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--------------------------------------S-S--S------------S-----------------------
--------S-----------------------SS-------------S--------S-------------------S---
--------S----------------------------------------SSS----------------------S-----
-----S------------------------S-------------------------------------------------
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---------S--------------------------------------------------S-------------SSSS--
------S--------------------------S----SSSSSSSSSSSSS----------------S------------
S-SSSSSSSSS-------------S--S----------------------------------------------------
-----------------------------------------------------------S--------------------
----------SSSSSSSSSSSSSSSSSSSSSSS-----------S--SSSS--S---------------SSS--------
------------------------------------------S--S-S--------------S---------S-S-----
S--------------------S------S-------S-------------------------------------------
---------------------------------------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S
S---------S----------S------S---------------S--S--------------------------S-----
--------------------------S----------SSSSSSSSSSSSSSSSSSSSSSSS-----------------S-
---------------------------------S------------------------------------S---------
-------------------------------------------------------------------------------S
-S-----------------------------------------------------------------S------------
-------------------------------------------SS-S----------------S----------------
-------------------------------------------------------SSSSS-----------SSSSSS---
---------------------------S--------------------------------S------S------------
-----SSS-SS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S---------S--------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S---S----------------S-----S-----SSSSS
------S---S------------S------------S------------------------------------S------
-----------------------------S--------------------------------------------------
----------------------------------------------------SSS-------------S-----------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
-------------S---------------------------S--------------------------------------
--------------------------------------------------------------------------------
-------------------------------S----S-------------------------------------------
-S------------------------------------------------------------------------------
---S-----------------------------------S------S-S-------------------------------
-------------------------------------S-------
>forward_3915
--------------------------------------------------------------------------------
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-------------------------------------------------------GGAGGAGATGGAGATCCCCA-----
--------------------------------------------------------------------------------
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>reverse_5801
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----------------------------------------GGACCAAACTGCAGCGAGTA--------------------
--------------------------------------------------------------------------------
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---------------------------------------------
>forward_5675
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-------------------------------------------------------CCAGTGAGAATGAGGCCTCG-----
--------------------------------------------------------------------------------
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>reverse_6922
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-----------------------------------------ACTGTCGTGGACCCTGTTCT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
