>input_sequence_59115
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------------------------------AT------------------------------------------------
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---------------------------GGGTCATGGCAGCA-------------------GCGGCGACGGTGGCGGCGGA
GGAGACGGAGCTCTGGCCGTGGTG----------------------------CCCGAGGAAGCCAAGCCGCAGCCGCAGA
TGCAGCGACAGACCGCCCTCGACGTGCCGCCCTTCCTCATCTTTGAAAAGTGCAGGGCGCCGGAGCTCTTGGAGTGCCAT
GCCTGCCACCTCCCCCTCAAACCGCCTATCTTCTCGGTAC-----TGTATATTACTTCTTGAATCT----TCG---AGTA
GGTTGTTTGCAGATTGATTAGAGTCATCCTGATTATTACTCCTTGCCATGGAAACGACTGCTGGTCTTGATCCTTATAT-
----TATAATAATTCGCAGTGCGACGACGGGCATCTGATGTGCTCGTCCTGCCGCGGCGCGCACGGCGAGGACTGCGGCC
GCGTCGCCGCCCACTGCCGCCTGGCAGACGCCTACGCCGGCGCCGTCAAGCTGCCGTGCGACTACGTCAAGTTCGGCTGC
GAGGCGGGACTCATCGTCTACCACGACGCCGCGGACCACCGCCGCGCTTGCCAGTACGCGCCCTGCTACTGCCCAGAGCG
CGCCGGGCCAGGA-------GGTGCCGAAGGCGGTTGCAACTTCTCCGGCTCCCGGC-----AGATGCTCCTCGACCACA
TCTCCACGGAACACTCCAGCCCCATCATCGTCGTCCGCTATGGCCAGCCGGGGAAGCTCAGCCTGCCCCTGACCCGGCGC
TGGCACGTCCTCGTCGGCGAGGAGGATATGGCCGACCGGCAGCGGAACGTGTTCGTGCTGGTCCTCGCCGAGCGCGACAA
GGGCGCCGCGGTGTCGATGGTGTGCGTCAGGGCGGACGAAGGCGCACCGGCGGTGCCGCAGTTCTCGTACAAGCTCACCG
TGGAGCACGCCGGCAGTGGTGCGAGGGTGACGTTCGAGTTGCCCGTGATGACATGCAGCTCCCTGCCCGGTGGCACGCCA
TGGCCGGACGAGGTCACGTCTCTGTACGTGCCGAAAGCGTATTTATCTGGCGACGCTGTCCCCCTCGGCATCCACATTGA
CAAACTCGTTCCTCCTCCTCTTCCTCCTCCTTCTGACACTACTACTCCTGCGCCGGCAACCGCCGCCGTCTTCAAGTTCA
CAGCGACAGATCAAGGCAACAAGAAACGAAAATCTAGCAATCCGAGGAAACTCTAG------------------------
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>chr3A_1_TraesCS3A01G505500
AACATATATGAGGTAACATGCAACACTTCATTTATTAAGCCATAGACTCATTTTGCATTGATATGTGTGATGTTACTCAT
ACTACTAGTAACTAGCTATGTTACTACTGTGCTCTCTTTCTTCATTTATTGCTCGCCACATCATCCATTCTATCTAAATA
TGCGTGATGTTACTACCTACGTTACTCCCATTGTGGGTAGTCTAAGGCTGGTCATAGTGGGGAGTAACTTAGACTAGTAA
CATACATATGTTACTAGTCTATGTTACTACCTCTATAATGCATAGTATCATACATCAGTATCATAAGAGGTCTTATTTAT
TGCCATGCATGACACATAGTAGCATCACATTTATAGTGGGTAGTGTCATAGGTGTGGTAACATAGTTGTCTTCATTTATT
ACTTTGTAGACTCATTATGCATTGGAAACCGCTATGTGATGATAACATATTATGTTACTCTATTTGCCTCTCTCCTCATT
AACTACTTGCCACATCATCATTTTTGCTTATGTGGCATCTATGTTACTACCTATGTTACTCCCACTATGACCAGCCTAAG
GAAACTTCCCT---------------------------------------------------------------------
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-------------------------------------------------------------------------------T
TTTCTGAAAACTC-------------------------------------------------------------------
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----------------------------------------------AACTA-TACTATTGTATTCTTATTCTTGCATATT
ATAAAAATGTGCAATTTCTGTGTAAAATCTGGGAACACATGCATGCACCTTTCCCCAAGAAGATATGGATGCCGATACAC
-GTTCTCATG---GTAGAAAAATAAGTCTCATGCATTGGTGCATGCATGCAT----T--------------CCCGATCTG
ACTTTCTCTCATCTCACCCTCTCTCCAGCTCTCCATCCATCAATTAATTCGTAGACACACCTCACGGGCCAGTAGGAAAG
CACACCGGGAATCGAAACGCGCCGTCGGAGTTTGCATGCCACCGGAG---TAAT--------------GTGGAGCGGACG
TACGGCTGTTGGGTTCTTCACTCGGCCTGGCCTCC----ATATAATCTCAAGCATCTTTTATGCGTGCGATCTTTGACCC
T----GAAGCAAGTTAAGTCAGAGGAGAA-AT------------------------------------------------
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---------------------------GGGTCATGGCAGCA-------------------GCGGCGACGGTGGCGGCGGA
GGAGACGGAGCTCTGGCCGTGGTG----------------------------CCCGAGGAAGCCAAGCCGCAGCCGCAGA
TGCAGCGACAGACCGCCCTCGACGTGCCGCCCTTCCTCATCTTTGAAAAGTGCAGGGCGCCGGAGCTCTTGGAGTGCCAT
GCCTGCCACCTCCCCCTCAAACCGCCTATCTTCTCGGTAC-----TGTATATTACTTCTTGAATCT----TCG---AGTA
GGTTGTTTGCAGATTGATTAGAGTCATCCTGATTATTACTCCTTGCCATGGAAACGACTGCTGGTCTTGATCCTTATAT-
----TATAATAATTCGCAGTGCGACGACGGGCATCTGATGTGCTCGTCCTGCCGCGGCGCGCACGGCGAGGACTGCGGCC
GCGTCGCCGCCCACTGCCGCCTGGCAGACGCCTACGCCGGCGCCGTCAAGCTGCCGTGCGACTACGTCAAGTTCGGCTGC
GAGGCGGGACTCATCGTCTACCACGACGCCGCGGACCACCGCCGCGCTTGCCAGTACGCGCCCTGCTACTGCCCAGAGCG
CGCCGGGCCAGGA-------GGTGCCGAAGGCGGTTGCAACTTCTCCGGCTCCCGGC-----AGATGCTCCTCGACCACA
TCTCCACGGAACACTCCAGCCCCATCATCGTCGTCCGCTATGGCCAGCCGGGGAAGCTCAGCCTGCCCCTGACCCGGCGC
TGGCACGTCCTCGTCGGCGAGGAGGATATGGCCGACCGGCAGCGGAACGTGTTCGTGCTGGTCCTCGCCGAGCGCGACAA
GGGCGCCGCGGTGTCGATGGTGTGCGTCAGGGCGGACGAAGGCGCACCGGCGGTGCCGCAGTTCTCGTACAAGCTCACCG
TGGAGCACGCCGGCAGTGGTGCGAGGGTGACGTTCGAGTTGCCCGTGATGACATGCAGCTCCCTGCCCGGTGGCACGCCA
TGGCCGGACGAGGTCACGTCTCTGTACGTGCCGAAAGCGTATTTATCTGGCGACGCTGTCCCCCTCGGCATCCACATTGA
CAAACTCGTTCCTCCTCCTCTTCCTCCTCCTTCTGACACTACTACTCCTGCGCCGGCAACCGCCGCCGTCTTCAAGTTCA
CAGCGACAGATCAAGGCAACAAGAAACGAAAATCTAGCAATCCGAGGAAACTCTAGTCAAACAAGACCAGCTAGCTAGTA
TGTCATAGCAACTAGCTATATTGCCATGTGCAATGCATCGTTTATATATCTCATGAGTTTGGTTTTTGTTAAGGGGCCTG
CTAAAAATCAGTCAACTGAAATTTAACCAAGTCTCGGTCAACCATGCAACATTTTATGACATCGTTTGCAATATTTTTTC
CTACCGGTTGCAACATCCATCTTGCTGGTTGTAAAATATTGTCCCTCATCGGTTGTAGCACGTCATCTCGCCGGTTACAA
CATCCTTTATTGACGTCTGTAGCATTTCAGTTAGAACGGTGGTAGCATTTATTGTTGTTGCTTGCAATACCGGTGCAACA
TTTTTTGTCACCGTTTGTAGCATCCAGCCGTGCTGCTTGTAGC--A---AAAAAATGCTAACGTCACTCGGCT--GTTCT
ATACACACCCTTTTGTTAATCTGAAATA-CGCTTTTTGTGCTCCCTTTTCTATTGCTTCGTGCACACCCTGGTGTTACGG
ATTCTGTTATGCATTTGAATGCACAAGATGCATGAATTAAAACAACTTTTTGTTGGGTCACTAATTATTGGCACTTGAGG
AAGATATCCTTTAAAAAGTACCGTCCTAGAAAATGCTACTCTGGTCGGAGCCGTTCCATCTCTATCTTTTTTCATGAAAA
ATACAAAAAGTTTGTGTATCATTCATTGATAAGTAGGAGAAAAATAACCACACAAGGTGTGGAAAAAGTAAAGAGGGATA
CAACATAGCACAAAACTCTCCTAGCTCGAACTCCAGCCGGCAAGACAAAGAGGCGAGATACAAGGTACCTAGGCCACGTC
ACGACCAATGCCCGACACCATCATCGCACCAACACGACTCTAGGCCAGACCAGATCAACGTACCTCCCCCCTATGCGCCG
AGAGAATCGGCAAGTGGGATGCAAGACCTGCTCGTAGTGGAAGGAGAAGCCTTGGAGAGAGTGTCGTTGAGGTCGTACAT
TGTGCCCCGTATACCACACCACGA
>chr2B_347
ACCTTC--------------------------------------------------------------------------
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--------------------------------ATAGTGGGTAGTGTCATAGGTGTGGTAACATAGTTGCCTTCATTTATT
ACTTTGTAGACTCATTATGCATTGGAAACCGCTATGTGATGGTAACATATTATGTTACTCTATTTGCCTCTCTCCTCATT
AACTACTTGCCACATCATCATTTTTGCTTATGTGGCATCTATGTTACTACCTATGTTACTCCCACTATGACCAGCCTAAG
GGAGCTTAGTGGCATGGCTCTGACCGCCACTAGCGAGGCCCAACGCTTCCCTGCTGCCGCTATACACTTCTCTATACTCA
AAACTGGACATAATTTTGTTGGACATGAATGGTGTAGTCTAATATTTTCCTGAACTCCTTGCTGGAGATAGTGAGTTGCA
TCTCTCCTTAATTTCCTTCGAACAAAGAACGGGGTCCTCTGGTTTGTATGAAAAAATAGAAATGAGAAAGATTTTGAGGA
CCATGGGGAATAAAAAAAAAGTTATGGCATATGCTTTCAGTTTCATTTTGGATTTGTGTGTAACAGACATGGAAACTCAT
GAACAAGTAGTTCCAGAACCTATACCACATTTATCAACAATTAAGAAAGCTCAGCAAAGTTATTTTACCTCGGGTTAAAA
CCCAAATAAATAATCTAGGAATGCAGATAAATTGCATGCATGTACATGATCAATATTCAGGGAAAAGGCAAGTTAACATC
CAGGTGAGACCTTATCTGCAACATTTTTTCATAATTTAGAAGTTTGTACCGAACCAAAACAGTAATAAGACATTATTGGG
CGCTCCAATCTTTCCATGGAATCACAAACCTATATTTTCATAGAATCGCAAAGTTGTGTCATACACAGGGATGACGGGTT
GTATCTGCAACAACATGGAGATTTACAGCCAACTATATATGTGGATTAAGTTCCAGTCTAACTGAATCTATCCACTATCC
ACTGAACTCTTGCATGCCATGTTACTTTTGCAATGGCATGGACTCCTGAAGCTACCTTCATAACATGAACAAGTTTTAGG
AGTAAGGTTGTACAATCAACAAAGCCACGAAACAAAATCAAAAAGGAAAAAAAGGTTTGGTAATCAAAGAGCCTACTTTG
GCAGCCAAATCTGAACGCTAAATTAAGCACACTGTTCCCAGAAATGCCATCATAGATGCTTTGTTTAGGCGTCGCTGCAA
TGTGGACAAACTCTCCGTAATACCATCATAGATGCTCTGTTTAGGCATGGATTGACGTAGAGGGAAAATTTATACTCAAC
CATAGTCCAGACTGACTTTTCCTTTATCAAGCCTTCCCTGACTGACATATATATCCAGTCCAGTATACATTCTATAATCT
GTAAAACTATTTCCCCTCTTCTATAATGCATCGGCAGAACACTTGTTGTTTCCTCAAAAAAAAAATGCAGTTAGCACACC
AAGGGTTCTCAACATCTACACTGGAATTTCATAGGAATAGCTTGGAGAAAGCATCATTTATAATAACTGATGCAGCTGTA
CTTTGGTGTATTTGAAAATATAGGAACTCTATGATTTTCAATAACACCATGTGGACATCCATTAAGCAGGTGATGAGGCT
GATTCTAAAAACCATCAAGAACTGGGTGATCCTGTCTTCGGATGGGGCGGCAGAAAGGCTGGAGGCCTTCTCGACACACC
TGGCGACCGATCTGAGACAACCATTGATGATTAGTGGCTGATCACGAAGCTCACTGGAGCCCCGTTGGTGACTCCATGGG
ACAAGCTGAAGATCTCGGACGACGCAGTGGGCTTCTTGTCCCCCTCCAAGAAGCGTTCAGAAGCTGCATCGTTGTCGAGT
CCGACCTCGACATTGGTGGCTGCCTGGTCCCCTCAGGCGGTGTCTGCACCGCCGCTGAAAGCACGCAAGGCATCCCAGGA
GCTTATCTGCATCTGATACTGGCGGTGCCGTGACCCGGTTGCTTTACCTTTGTACTGGCTTAAAGCCATCGTTTTCTTCT
TTTCTGAACTGCTCCTCTTAGTGAGCTTATGTAATAACTGAATCTGATCTGAATTTGGTTTCATTAATATAATGGAACCG
GGGAAAGGCTCCCTGTTCTTCTAAAAAAAAAGCATCATTTATCGCATATAACAAAGAAATTATGAATATCCATGACCCAA
TGAAACACTAATCTGAAACCTAAAGAACCCAGCTACACAGGCCATTTCTTTGAAGAATAGTTATAATCGAAGGCCTTCAT
TTTAAGTACATCTAGATTCCAAGGCCCTTTATTTGGAAGAACAATTAAAATGTAGTGCTTGGTTTGGTGCCTGATGCCTG
GATCTTCTTGATGCGTGCGTTCAGATGCATAAGACGGTCCAGCTATAGCTATTACTATTACTTGGGCCAGGCCTAATGAC
AATTCT--------------------------------------------------------------------------
---------------------------------CATTGGTGCAGCCATACA-----------------------------
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-------------------------------CAGAAT--ATATTACCTGAACCACCACCAACGCGTGAACATCAAACCAT
GGTACTGGCACAACAGAGGGATGGTGGTTTTGCTGATGCTAGCCATTCCGTGATTCCGTCGAACACCTCCTGTGCCGCAA
GAGAAGGTCGGCATCCTACGCATTGGTCAGCGAGCTTGGGAGGTTAGGTGCTTACCGCAATAAACAACATATATATCTCA
TTTCTCAGCTTTTCGTCGACATGCGCTAGGCCAGGCAATAATGGACGCTAGGAGTACCATTGTGCCATGTCGCTTCCCGT
CACTGTGGCGCAGCTGCCCTCTCGCTCTAGGCCATGCTGCCACCAGCACCACCGCTGCGTTCGCCTCCGCGTCGACCACC
TCCACGTCACCCATCTCTGCCATAGCTTGGTTCGCGTGCTCGGCAAGGATCATCGACGGCGCCGCGAATGCCTCGGAGGA
GCCCTTGTCCGGTGGCGGCGAGAGTGAGGCTCGTGGCGGCCTCCTGCGCCCCAATCGACTGCGGCGACGGTGATGCTCTT
GGCGGCCTCCTGTGAGCCCAGAGGTGCCGGCGAGTGTACGTCTCGTGGCGGCCTCCTGTACGCCAAGCGACCGCAGCGAG
GGCGAG----------------------------------------------------------GCTCTTGGCGGTCTCC
CCTATGCCAAGCGA------------------------------------------------------------------
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---------------------CGACGGCGAGGATGCGTTCTTGGCGGCCTCCTGCGGCGTTGTGAGTAGCAGCCTCATG-
------------------------------------------------------------------------------GT
GAGGAGCAGCGCGTCGTGGATGTCCCAT----------------------------------------------------
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----------------------------------------------------GAGGGTCAGCTTGCCGGCGAAGAGTTTC
CAATGGCGTGAGGAGCAGCGTTGTACATGCTTCCGTCAGTT---------------------------------------
-----------------------------------------------------------------------------CCG
TGTAGCACGCAGCCGATGCCTATGAGGTTGCGGCGCCACCGTCTCGTGCTGGCTAAATCAAATCAAAGGGGAGGAAGAGG
GATGAATACCAGAAGACGGGAAAGCATCAATAGAAGGAGGCAGCAAAAGCACCTGTCCCATCGGAGAGGTCCAGACCCAT
GAATGCCTAGCCGCGAGGCGCTCAGGCTACCTC----------------GCGCCGCCGACCGCCCCCATAGCTCCTCTTC
ACAAAGAAAAATTGCACAAGAACGCCACCAGTTTTTCCCCTCGCCCTGCAGTCTTTTCGCCTTCCCACCTCGCCCACAGT
GAGCTCAATGGGACGCGTGTTCCCAAAGTGTAGCGGCCCAATATAC----------------------------------
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--------------------CTTGCTGGTTCAAGGCGGTTCATAATTAGTCAACATAGGCTGACAAGGTGGTCCCACGCA
CCCTTCAACACCTCGATTCACCCCAGAGCTGCATTTTAAGGCTGGTCATAGTGGGGAGTAACTTAGACTAGTAACATACA
TATGTTACTAGTCTATGTTACTACCTTCATAGTGGGTAGTGTCATAGGTGTGGTAACATAGTTGCCTTCATTTATTACTT
TGTAGACTCA----------------------------------------------------------------------
------TTATGCATTGGAAACCGCTATGTGATGGTAACATATTATGTTACTCTATTTGCCTCTCTCCTCATTAACTACTT
GCCACATCATCATTTTTGCTTATGTGGCATCTATGTTACTACCTATGTTACTCCCACTATGACCAACCTAAGG-------
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>chr3A_557
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----------------------------------------------------------------------------TAAG
AAAACTT-CCT---------------------------------------------------------------------
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-------------------------------------------------------------------------------T
TTTGTGAAAACTC-------------------------------------------------------------------
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----------------------------------------------AGCTACTACTATTGTATTCTTATTCTTTCATATT
ATAACAATGTGCAATTTCTGTGTAAAATCTGGGAACACATGCATGCACCTTCCCCCAAGAAGATGTGGATGCCGATACAC
-GTTCTCATG---TTAGAAAAACAAGTCTCATGCATTGGTGCATGCATGCATGCATTCCCTATCTGAAT-----------
---------------GCCGTCTGTCCAGCTCTCCATCCATCAATTAATTCGTAGACACGCCTCACGAGCCAGTGGGAAAG
CACACCGGAAATCGAAACGCGCCGTCGGAGTTTGCATGCCACCGGAGGAGTAAT--------------GTGGA-------
-----CTGTTGGGTTCTTCACTCGGCCTGGCCTCC----ATATAATCTCAAGCATCTTTTATGCGTGCGATCTTTGACCC
T----GAAGCAAGTTAAGTCAGAGGAGAAAAT------------------------------------------------
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---------------------------GGGTCATGGCAGCA-------------------GCGGCGACGGTGGCGGCGGA
GGAGACGGAGCTCTGGCCGTGGTG----------------------------CCCGTGGAAGCCAAGCCGCAGCCGCAGA
TGCAGCGACAGACCGCCCTCGACGTGCCGCCCTTCCTCATCTTCGAAAAGTGCAGGGCGCCGGAGCTCTTGGAGTGCCAT
GCCTGCCACCTCCCCCTCAAACCGCTTATCTTCTCGGTAC-----TGTATATTACTTCTTGAATCT----TCG---AGTA
GGTTGTTTGCAGATTGATTATAGTCATGGTGATTATTGCTCCTTGCCATGGAAACGACTACTGGTCTTGATCCTTATAT-
----TATAATAATTCGCAGTGCGACGACGGGCATCTGATGTGCTCGTCCTGCCGCGGCGCGCACGGCGAGGACTGCGGCC
GCGTCGCCGCCCCCTGCCGCCTGGCAGACGCCTACGCCGGCGCCGTCAAGCTGCCGTGCGACTACGTCAAGTTCGGCTGC
GAGGCGGGGCTCGTCGTCTACCACGACTCCGTGGACCACCGCCGCGCGTGCCAGCACGCGCCCTGCTGCTGCCCTGAGCG
CGACGGGCCC-------TGGGGCGGCGGT---GGCTGCGACTTCACCGGCTCCCGGG-----AAATGCTCCTCGAGCACA
TCTCCACGAACCACTCCCGCCAGGTCATCCTCATGCGCCACGGCCAGACGGGGAGGCTCAGCCTGCCACTGGCACGGCGC
TGGCAGGTCCTCGTCGACCAGGACGACATGGCCAACCGGCATCGGAGCGTGTTCCTCGTGATCTTGGCCGAGCGCGACAA
GGACGCCGCGGTGTCGCTGGTGTGCGTCAGGGCGGACGGCGACGCACCGGGCGCGCCGCAGTTCTCGTACAAGCTCGCTG
TGGAGCACACCGGCAGTGGCGCGAGAGTGACGTTCGAGTTGCCGGTCATGAAAAGCAGCTCCCTGCCCGCTGGCACGCCA
TGGCCGGACGAGTTTACCTCCCTGTCGGTGCCGAAAGCGTATCTGTCTGACGACATTGTCCCCCTCAACATCCACATTGA
CAAACACGTCGCTCCTCCTCCCCCTCCTGCTGACGCCCCTACT-------------------------------------
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>chr3B_613
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--------------------------------------------------------------------------CATATT
ATAAAAATGTGCCATTTCTGTGTAAAATCTGGGAACACATGCATGCACCTTTCCCCAAGAAGATGTGGATGCCGATACAC
TGTTCTCATGGGAGTAGAAAAACAAGTCTCATGCATTGGTGCATGCATGCAT----T--------------C--------
------TCTCATCTCGCCGTCTGTCCAGCTCTCCATGCATCAATTAATTCGTACACACACCTCACGGGCCAGTGGGAAAG
CAGACCGGAAATCGAAACGCGCCGTCGGAGTTTGCATGCCACCGGAG---TAAT--------------GTGGAGCGGACG
TACGGCTGTTGGGTTCTTCACTCGTCCTGGCCTCC----ATATAATCTCAAGCATCTTTTATGCGTGCGATCTTTGACCC
T----GAAGCAAGTTAAGTTAGAGGAGAAA-T------------------------------------------------
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---------------------------GGGTCATGGCAGCA-------------------GCGGCGACGGCGGCTGCGCA
GGAGACGGAGATCTGGCCGTGGTG----------------------------CCCGTGGAAGCCAAGCCGCAGCCGCAGC
CGCAGCGACAGCCCGCCCTCGACGGGCCGCCCTTCCTCATCTTCGAAAAGTGCAGGGAGCCGGAGCTCTTGGACTGCCAT
GCCTGCCACCTCCCCCTCAAACCACCTATTTTCGCGGTAG-----------------CTTGAATCT----TCGTGTAGTA
GCTTGTTTGCAAATCGGTTAGAGTAATGGTAATTCTTACCTCATACCA----------TGCTCGTCTTAATCCTT-----
------------TTTGCAGTGCGACGAAGGGCACCTGATGTGCTCGTCCTGCCGCGGTGCGCACGGCGAGGACTGCGGCC
GCGTCGCCGCCCACTGCCGCCTGGCAGACGCCTACGCCGGCGCCGTCAAGCTGCCGTGCGACTACGTCAAGTTCGGCTGC
GAGGCGGGCCTCGTCGTCTACCACGACGCCGCGGACCACCGCCGCGCTTGCCAGTACGCGCCCTGCTACTGCCCGGAGCG
CGCCGGGCCAGGGCCCAGGGGGCGGGGATGGCGGCTGCGACTTCTCCGGCTCCCGGC-----AGATGCTCCTCGACCACA
TCTCCACGGAACACTCCCGCCCCGTCATCGTCGTCCGCTATGGCCAGCCGGGGAAGCTCAGCCTGCCCCTGACCCGGCGC
TGGCACGTCCTCCTCGGCGAGGAGGATATGGCCGACCGGCAGCGGAACGTGTTCCTGCTGGTCCTCGCCGAGCGCGACAA
GGGCGCCGCGGTGTCGATGGTGTGCGTCAGGGCGGACGAAGGCGCACCGGCGGTGCCGCAGTTCTCGTACAAGCTCACCG
TGGAGCACGCCGGCAGTGGTGCGAGGGTGACGTTCGAGTTGCCCGTGATGACATTCAGCTCCCTGCCCGGTGGCACGCCA
TGGCCGGATGAGGTCACGTCTCTGTACGTGCCGAAAGCGTATTTGTCGGGCGACGCTGTCCCCCTCGGCCTCCACATTGA
CAAACTCGTTCCTCCTCTTCTTCCTCCTCCTTCTGACACTACTCCTCCTGCGCCGGCAACCGCCGCGGTCTTCAAGTTCA
CAGGGACAGATCAAGGCAACAAGAAACGAAAATCTAGCAATCCAAGGAAACTCTAGTCAAACAAGACCAGCTAGCTAGTA
TGGCATAGTAACTAGCTATATTGCCATGTGAAATGCATCGTTTATATTTCTCATGAGTTTGGTTTTTGTTAAGGGGCCTG
CTAAAAATCAGTCGACCGAAATTTAACCAATTCTCAGTCAACCATGCAACATTTTATGACATCGTTTGCAATATTTTTTC
CTACCGGTTGCAACATCTGTCTTGCTGGTTGTAAAGTGTCGTCCCTCATCGGTTGTAGCACGTCATCTCGCCGGTTACAA
CATCCTTTATTGATCCTTGTAGCATTTCAGTTAGAACGGTTGTCGTATTTATTGTTGTTGCTTGCAATACCGGTGCAACA
TTTTTTGTCACCGTTTGTAGCATCCAGCCATGCTGCTTGTAGCGAAAAAAAAAGATGCTAACGTCACTCGACTGAGTTCT
AGACACACCCTTTTGTTAATCTGAAATAACGCTTTCTGTGCTCCCTTTTCTATTGCCTCGTGCACAACCTGGCGTTATGG
ATCCTGTTATGCATTTGAATGCACAAGATGCATGAATTAAAACAACTTTTTGTTGGGTCACTAATTATTGGCACTTGAGG
AAAATATCCTTTAAAAAGTACCGTCCTGGAAAATGCTACTCGGGTCGGAGCCGTTCCATCTCTATCTTTTTTCATGAAAA
ATACGAAAAGCTTTGGTATTATTCATTGATAAGTAGGAGAAAAATAACCACACAAGGTGTGGAAAAAGTAAAGAGGGATA
CAACATAGCACAAAACTCTCCAAGCTCGAACTCCAGTCGGCAAGGCAAAGAGGCGAGATACAAGGTATGTAGGCCGCGTC
ACGACCAATGCCCGGCACCATCATCGCACCAACACGACTCTAGGCCAGACCAGATCAACGTACCTCCCCCCTATGCACCT
AGAGAATCGGCAAGTGGGATGCAAGACCTGCCCGTAGTGCAAGGAGAAGCCTTGGAGAGAGCGTCGTTGAGGTCGTACAT
TGTGCCCCGTATGCCACACCA---
>chr2A_617
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------------------------------------------------------------------------------TT
ATAAAAATGTGCAATTTCTGTGTAAAATCTGGGAACACATGCATGCACCTTTCCCCAAGAAGATGTGGATGCCGATACAC
-GTTCTCATG---GTAGAAAAATAAGTCTCATGCATTGGTGCATGCATGCAT----TCCCGATCTGACTTTC--------
------TCTCATCTCGCCGTCTCTCCAGCTCTCCATCCATCAATTAATTCGTAGACACACCTCACGGGC----------G
CACACCGGGAACCGAAACGCGCCGTCGGAGTTTGCATGCCACCGGAG---TAA--------------TGTGGAGCGGACG
TACGGCTGTTGGGTTCTTCACTCGGCCTGGCCTCC----ATATAATCTCAAGCATCTTTTATGCGTGCGATCTTTGACCC
T----GAAGCAAGTTAAGTCAGAGGAGAAA-T------------------------------------------------
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---------------------------GGCTCATGGCAGCA-------------------GCGGCGACGGCGGG---GGA
GGAGACGGAGATCTGGCCGTGGTG----------------------------TCCGTGGAAGCGAAGCCGCAGCCGTG--
----GCGAGCGCCCGCCCTCGACGTGCCGCCCTTCCTCATCTTTGAGAAGTGCAGGGCGCCGGAGCTCTTGGACTGCCAT
GCCTGCCACCTCCCCCTCAAACCGCCTATCTTCTCGGTA-----------------------------------------
GGTTGTTTGCAGATTGATTAGAGTCATGGTGATTATAACTTCTTGCCATGGAAACGACTGCTCGTCTTGATCCTTATATA
TTACTATAATAATTCGCAGTGCGACGACGGGCATCTGATGTGCTCGTGCTGCCGCGGTGCGCACGGCGAGGACTGCGGCC
GCGTCGCCGCCCACTGCCGCCTGGCAGACGCCTACGCCGGTGCCGTCAAGCTGCCGTGCGACTACGTCGAGTTCGGCTGC
GAGGCGGGCCTCGTCGTGTACCACGACGCCGCGGATCACCGCCGCGCTTGCCAGTACGCGCCCTGCTACTGCCCCGAGCG
GGCCGGGCCC-------GGGGGCGGCGAAGGCGGCTGCGACTTCTCCGGCTCCCGGC-----AGATGCTCCTCGACCACA
TCTCCACGGAACACTCCCGCCCCGTCATCGTCGTCCGCTATGGCCAGCCGGGGAAGCTCAGCCTGCCCCTGACCCGGCGC
TGGCACGTCCTCGTCGGCGAGGAGGATATGGCGGACCGGCAGCGGAACGTGTTCCTGCTGGTCCTCGCCGAGCAAGACAA
GGGCGCCGCGGTGTCGATGGTGTGCGTCAGGGCGGACGAAGGCGCACCGGCGGTGCCGCAGTTCTCGTACAAGCTCACCG
TGGAGCACGCCGGCAGTGGTGCGAGGGTGACGTTCGAGTTGCCCGTGATGACATGCAGCTCCCTGCCCGGTGGCACGCCA
TGGCCGGACGAGGTCACGTCTCTGTACGTGCCGAAAGCGTATTTGTCTGGCGACGCTGTCCCCCTCGGCATCCACATTGA
CAAACTCGTTCCTCCTCCTCTTCCTCCTCCTTCTGACACTACTCCTCCTGCGCCGGCAACCGCCGCCGTCTTCAAGTTCA
CAGCGACAGATCAAGGCAACAAGAAACGAAAATCTAGCAATCCGAGGAAACTCTAGTCAAACAAGACCAGCTAGCTAGTA
TGTCATAGCAACTAGCTATATTGCCATGTGAAATGCATCGTTTATATATCTAATGAGTTTGGTTTTTGTTAAGGGGCCTG
CTAAAAATCAGTCAACTGAAATTTAACCAAGTCTCAGTCAACCATGCAACATTTTATGACATCGTTTGCTATATCTTTTC
CTACCGGTTGCAACATCCGTCTTGCTGGTTGTAAAATGTCGTCCCTCATCGGTTGTAGCACGTCATCTCACCGGTTACAA
CATCCTTTATTGACGATTGTAGCATTTTAGTTAGAACGGTCGCCGCATTTATTGTTGTTGCTTGCAATACCGGCGCAACA
TTTTTTGTCACCGTTTGGAGTATCCAGCCGTGCTGCTTGTTGC--AAAAAAATTATGCTAACGTCACTCGGCTGAGTTCT
AGACACACCCTTTTGTTAATCTGAA-TAACGCTTTCTGTGCTCTCTTTTCTATTGCCTCGTGCACACCCTGGCGTTACGG
ATTATGTTATACATTTGAATGCACAAGATGCATGAATTAAAACAACCTTTTGTTGGGTCACTAATTATTGGCACTTGAGG
AAAATATCCTTAAAAAAGTACTGTCCTGGAAAATGCTACTCCGGTCGGAGCCATTCCATCTCTACCTTTTTTCATGAAAA
ATACAAAAAGCTTGTGTATCATTCATTGATAAGTAGGAGAAAAATAACTACACAAGGTGTGGAAAAAGTAAAGAGGGATA
CAACATAGCACAAAACTCTCCTAGCTGGAACTCCAGCCGACAAGGCAAAGAGGCGAGATACAAGGTATCTAGGCCACGTC
ACGACCAATGCCCGGCAACATCATCGCACCAACACGACTCTAGGCTAGACCAGATCAACGTACCTCCCCCCTATGCGCCT
AGAGAATCGGCAAGTGGGATGCAAGACCTGCCCGTAGTGGAAGGAGAAGCCTTGGAGAGAGCGTCGTTGAGGTCGTACAT
TGTGCCCCATATGCCACAC-----
>chr3D_638
GTC-----------------------------------------------------------------------------
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----------------------TAAAATCTGGGAACACATGCATGCACCTTTCCCCAAGAAGATGTGGACGCGGATACAC
-GTTCTCATG---GTAGAAAAACAAGTCTCATGCATTGGTGCATGCATGCATGCATTCCCGATCTGACTTTC--------
------TCTCATCGCGCCGTCTGTCCAGCTCTCCATTCATCAATTAATTCGTAGACACACCTCACGGGCCCGTGGGAAAG
CACACCGGAAATCGAAACGCGCT-TCGGAGTTTGCATGCCACCGGAG---TCCGGAGTAATGTGGACTGTGGAGCGGACG
TACGGCTGTTGAGTTCTCCACTCGGCCTCGCCACTATATATATAGTCTCAAGAATCATTTATGGGTGCGATCTTTGACCC
TGGCAGAAGCAAGTTAAGTCAGAGGAGAAA-T------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GGGTCATGGCAGCA-------------------GCGGCGACGACGGCGGTGGA
GGCGACGGAGCTCTGGCCGCGGTG----------------------------CCCGTGGAAGCCAAGCCGCAGCCGCAGC
CGCAGAGACAGCCCGCCCTCGACGTGCCGCCCTTCCTCATCTTCGAAAAGTGCAGGGCACCGGAGCTCTTGGACTGCCAT
GCCTGCCACCTCCCCCTCAAACCGCCTATCTTCTCGGTAC-----TGATTATTAA--CTTGAATCT----TTG---AGTA
GCTTGCTTGCAAATCGATTAGAATCATGTTAATTATTACTTCTTTCCATCGAAACAACTACTCGTTTTGATCCTTAGAT-
----TATAAT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------
>chr3B_883
GTAAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------TGTGGAGCGGACG
TACGGCTGTTGGGTTCTCCACTCGGCCTGCCCACTAT--ATATAGTCTCAAGAATCATTTATGCGTGCGATCTTTGACCC
TGCC--AAGCAAGTTAAGTCAGAGGAGAAA-T------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GGGTCATGCCAGCA-------------------GCGGCGATGGTGGCGGCGGA
GGAGATGGAGCTCTGCCCGTGGTG----------------------------CCCGTGGAAGTCAAGCCGCAGCCGCAGC
CGCAGCGACAACCCGCCCTCGACGTGCCACCCTTCCTCATCTTCGAAAAGTGCAGGGCACCGGAGCTCTTGGACTGACAT
GCCTGCCACCTCCCCCTCAAACCGCCTATCTTCGCGGTACACTACTGATTATCAA--CTTGAATCTTAGATCG---AGTA
GCTTATTTACAGATCGATTAGAGCCATGGTGATTATTACTCCTTGCCATGGAAACGACTGCTGGTCTTGATCCTGAGTAC
-----ATTATAATTCGCAGTGCGACGACGGGCATCTGATGTGCTCACTCTGCCACGGCGCGCACGGCGAGGACTGCGGCC
ACGTCGCCGCACACTGCCGCCTGGCAGACGCCTACGCCGGCGCCGTCAAGCTGCCGTGCGACTACGTCAAGTTCGGCTGC
GAGGCGGGTCTCGTCGTCTACCACGACTCCGTGGACCACCGCCGCGCGTGCCAGCACGCGCCCTGCTGCTGCCCTGAGCG
CGACGGGCCC-------TTGGGCGGC---GGCGGCTGTGACTTCACCGGCTCCCGGCCCGGGAGATGCTCCTCGACCACA
TCACCACGAACCACTCCCGCCAGGTCATCCTCATGCGCTACGGCCAGACAGGGAGGCTCAGCCTGCCACTGGCCCGGCGG
TTGCAGGTCCTCGTCGACCAGGACGACATGGCCAACAGGCATCGGAGCGTGTTCCTCGTGGTCTTGGCCGAGCGCGACAA
GGACGCCGCGGTGTCGCTGGTGTGCGTCAGGGCGGACGGTGACGCACCGGGCGCGCCGCAGTTCTCTTACAAGCTCGCCG
TGGAGCACACCGGCAGTGGCGCGAGGGTGACGTTCGAGTTGCCGGTCATGAAAAGCAGCTCCCTGCCCGCTGGCACGCCA
TGGCCGGACGAGTTTACCTTCCTGTCGGTGCCTAGAGCGTATCTGTCAGGCGACATTGTCCCCCTCACCATCCACATTGA
CAAACTCGTTCCTCCTCCTCCCCCTCCT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------
>chr2A_885
--------------------------------------------------------------------------------
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---------------------------------------------------AAT--------------GTGGAGCGGACG
TACGGCTGTTGGGTTCTCCACTCGGCCTCGCCACTATATC---AGTCTCAAGAATCATTTATGCGTGCGATCTTTGACCC
TGTC--AAGCAAGCTAAGTCAGAGGAGAAA-T------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GGCTCATGGCAGCA-------------------GCGGCGACGGTGGCGGTGGA
GGAGACAGAGCTCTGGCCGTGGTT----------------------------CCCGTGGAAGTCAAGCCGCAGC------
------GACAGCCTGCCCTCGACGTGCCGCCCTTCCTCATCTTCGAAAAGTGCAGGGCACCGGAGCTCTTGGACTGCCAT
GCCTGCCACCTCCC-CTCAAACCGCCTATCTTCGCGGTACACTACTGATTATCAA--CTTGAATCTTAGATCG---AGTA
GCTTATTTACAGATCGATTAGAGTCATGGTGATTATTACCCCTTGCCATCGGAACGGCTGTTGGTCTTGATCGTTACATA
TTAGTATAATAAATTGCAGTGCGACGACGGGCATCTGATGTGCTCGTCCTGCCACGGCGCGCACGGCGAGGACTGCGGCC
GCGTTGCCGCCCACTGCCGCCTGGCAGACGCCTACGCTGGCGCCGTCAAGCTGATGTGCGACTACGTCAAGTTCGGCTGC
GAGGCGGGGCTCGTCGTCTACCACGACTCCGTGGACCACCGCTGCGCGTGCCAGCACGCGCCCTGCTAC--CCCTGAGCG
CGACGGGCCT-------TCGGGCGGC---GGCGGCTGCGACTTCTCAGGCTCCCGG-----GAGATGCTCCTCGACCACA
TCTCCACGAACCACTCCCGCCAAGTCATCCTCATGCGCTACGGCCAGACGGGGAGGCTCAGCCT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>SNPs
-S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------S-----------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------S-------------------------S------
----------------------------------------------------------------S---------------
------------------------------------------------------------------------SSSSSSSS
SSSSSS---------S--S------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------SS---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S---S-------------------------------------------------------------S-----
------------S---------S-S---------S---S-----------------------------------------
-----------------S-----S--------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
-----------------------------------S--------------------------------------------
------------------S------------------S------------------------------------------
---------------SS--------------------------S------------------------------------
-----------------------------------------------------S--------------------------
-S---------------------------------S--------------------S---------------S-------
--------------------------------------------------------------------------------
--S------------------------S-------------S--------------------------------------
----------S---------------------------------------------------------------------
--------------------------------------------S----------------------S------------
--------------S----------------------------------------------------------------S
-------------------------------S-----------------------------S------------------
------------S--------SSS
>forward_147
--------------------------------------------------------------------------------
-----------------------------------------------ATTGCTCGCCACATCATCCA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------
>reverse_4195
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TTGCAACTTCTCCGGCTCC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>forward_2881
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TGCATGCATTCCCGATCTG
A-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_5174
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------AATGCTAACGTCACTCGGCT-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
