>input_sequence_59081
--------------------------------------------------------------------------------
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-----------------------------------------ATGGAG---------------------------------
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---------------------GAGCCACGATGGCTCGGTGGTTCTCTGCTCCAGCGAACGCAGGCGGCAGTCATGCCAAG
CAGGTTCATGCGCTCCCGCCAGCTCTCGAGCGAGGTATTAAATTCTGTGCAATCGGAAAAGCAACTTGCATATGCCTCTT
GTATTAGCCAGAAACAAGAGGAAACTTACTTACTTATCATGGTCGTACTTGTTTAATCTGACCTGAATCTGTACATCTTT
ACATACTGCTGTTTGTAACACATGACTGCCTGCAAATCATATCATTAAGAAACTTATTTTCCTGGTTGATTTGAGCATGT
CGTTTTACTCATCCCTTTAGCAAATCATTAAACGAATAAGATAGATGTTGCTGTGGTTTTGATATCTTGAACGCAATTGA
TGCACTTCGTATACAGGTCAGTTATTTATTTACTAAGCATTATTTACTAATCACGGACACTGTTAGTCGATCAATCTACT
ATCGAAATCGATCCAGCCATATAAACTGATTTCAGATAATCCACTGAACAAGGCCCTTACTTAAA----AACCAAACCAA
ACATACATTATATATTAGCTCCATCTATATAC-AGTAACTATGGGGATGCATTCTGTATATTTTGAACCTCACTTTATTG
ACAGACAGGACATGATCCTTCTTAACTATTTACCAATTACAATCAGTACTTACTTAATGATCGACTATGCAAATTAAGTA
TATTGATCGTTATCTATGTGTACCAATCCAGCATGCTCGTGCACACTCTAGACGCCAGATCCTGCAGAAGGAGGACGAGC
TGCATGATGCGTTGTCTAAGGCTAACGAGCAGCATCTTTCAGCACAAGCCACTCAAAAAAGACCATTTAACCTTATGTAG
GATACAAAATCACTTGATCTCCTTCTTTAATGTCCTGTTTGTTTGTTTGACAGAAGTTGATATATACATATATATGATCT
CATTTGACCTACCCCTCTACTTGCAGCCGCTTGCAGGTGTACTCACAAAGGGCTCGGGGTGTGTTAGATTTGGCTTGCAA
GGTGACACTTTAC--GTTTATGGTGGTGCTTTCCTGCTTGATATCACTGGCGCCGGCAGGATGTTAGGGTTAGGGCCAGA
AATCAATGAAGACAACATTCAAAGACTGAGAACCAAAGATGGCTCAGTTGAATTATGA----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------
>chr1A_1_TraesCS1A01G438200
GATGCTTGAAGAGAGGAGCGAGATGCGCGTCTCGCGTAGTGAAGGTAGGT-GGGAAAGTGAAGCGGCTCCCCTCGCCTCC
CCCGCTCTAGAAGGCTCCACGCCCGGTTCGGTGCTGGGCCCCGCATGGCGGTCAGGCGGCCATGGAGAAGCTCCCACGCG
TCCAC-----------------------------GGGGCCGCCCCAACCCAGTCCGCACCCGCCTGGATCTCCGTACGCC
TCCCGTGCACCGCACCTCGAGACGTGCCATGCGTAGCGCCCGCTGGGGACGCGCACGTCGCCGGAAATCACTCCCGAATC
CTCGCAAAATGGCATGGCAGCGAGATGGTGTCGCCAATGTTTATGTACTCCCCTGCACGAAGAAATCGCGCATCCACCGT
GACTCCACAGTCATCAATCAGGATGAGACGGAGAGCATCTCGCCGGAGAATCAGCTCGCCGTCATAGAATGTGAGCGAGC
GCTTCTGCAGATCGGCGGCGTAGGATACGCGCCATCTCTCGTCGGGCGCGTCGCCCTGTTTGTCGCGTGAGCACGACGCG
TGAGCCATCCTTGCATCTCCTCTTTTCACCACCCAACAGGTCACTAGGTGTCATCTTAGGTGGTAGTTGTACACGGTTTG
GAAATAATCTACAAGTCAATAGAACTGGTACGTCC---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TTAGCTAGCTTAG
GTG---GTATAGCATATGCGTGCGAGTTCGAGTCTGCTACGT-------CTTAGTAGTAAGAGTAGGATTAGGTTGTTTT
GTCGGTTGTTCATGTATATGTACATACACAACCTTGCGTGAGATTAT--------AAAATCTTGAGAGAAAAAA-AAGGA
GAGAAATCTAGTGCGTGTGTTCGTGGTTCTTTGACGTGATTGATCTTGTAGGCGAATCCCAACACACATACACCGTTCTC
GTGAATCAATCTAGCTGCTGGTGAAATCAAGCAAGGCCAGCGAAGATCCATGGCGGCGGCGCTTCGATGAGCGGCGAGAA
GGCTCGGTGGCTCGCTGCTCCAGCGGACACACGCTGCGGTCATGGAG---------------------------------
--------------------------------------------------------------------------------
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---------------------GAGCCACGATGGCTCGGTGGTTCTCTGCTCCAGCGAACGCAGGCGGCAGTCATGCCAAG
CAGGTTCATGCGCTCCCGCCAGCTCTCGAGCGAGGTATTAAATTCTGTGCAATCGGAAAAGCAACTTGCATATGCCTCTT
GTATTAGCCAGAAACAAGAGGAAACTTACTTACTTATCATGGTCGTACTTGTTTAATCTGACCTGAATCTGTACATCTTT
ACATACTGCTGTTTGTAACACATGACTGCCTGCAAATCATATCATTAAGAAACTTATTTTCCTGGTTGATTTGAGCATGT
CGTTTTACTCATCCCTTTAGCAAATCATTAAACGAATAAGATAGATGTTGCTGTGGTTTTGATATCTTGAACGCAATTGA
TGCACTTCGTATACAGGTCAGTTATTTATTTACTAAGCATTATTTACTAATCACGGACACTGTTAGTCGATCAATCTACT
ATCGAAATCGATCCAGCCATATAAACTGATTTCAGATAATCCACTGAACAAGGCCCTTACTTAAA----AACCAAACCAA
ACATACATTATATATTAGCTCCATCTATATAC-AGTAACTATGGGGATGCATTCTGTATATTTTGAACCTCACTTTATTG
ACAGACAGGACATGATCCTTCTTAACTATTTACCAATTACAATCAGTACTTACTTAATGATCGACTATGCAAATTAAGTA
TATTGATCGTTATCTATGTGTACCAATCCAGCATGCTCGTGCACACTCTAGACGCCAGATCCTGCAGAAGGAGGACGAGC
TGCATGATGCGTTGTCTAAGGCTAACGAGCAGCATCTTTCAGCACAAGCCACTCAAAAAAGACCATTTAACCTTATGTAG
GATACAAAATCACTTGATCTCCTTCTTTAATGTCCTGTTTGTTTGTTTGACAGAAGTTGATATATACATATATATGATCT
CATTTGACCTACCCCTCTACTTGCAGCCGCTTGCAGGTGTACTCACAAAGGGCTCGGGGTGTGTTAGATTTGGCTTGCAA
GGTGACACTTTAC--GTTTATGGTGGTGCTTTCCTGCTTGATATCACTGGCGCCGGCAGGATGTTAGGGTTAGGGCCAGA
AATCAATGAAGACAACATTCAAAGACTGAGAACCAAAGATGGCTCAGTTGAATTATGACAACTGCAGAGTTTGGTTAGCT
AGCACCACGCTATCTTTGATGACTTTGTGTGA-AGAGTGAATTACAGAAAACATCGACATTGAAGGTTACGGTTGCAGAA
ACCACACTTCTATATATTTAAGCCAAAAACCACTAATTCTGAGGCTAATGTTTTGAAGAAAAAAAACACTAGTTGGCAGC
TTTGGACGTTTTAAGGATAATTATGACATGTGGAGCCCACTTTTATTGACGTGGCGTAACGGTTTGGACTAGATGGCGTT
AGACGTATTTTTCTTGC-GAAAAACTCCTTTAGGAAACAAACAGCCAACTCCCCTGGATCAAAGAGATAAAAAAGCACAA
ACTCTCCTCCCCTCATGCCGCCGTACGTGCTGAGCGCCTCGCCGCCCCGGCAAGCCCCGCCGTCGGTAGGCCTGCGCATG
CCACAGCCCTTGCCCTCCCCAGGCCGCCGCCACTCCCCTATCATCTGTGCGCCGACGTCGTTCCCTCGCCACATCGACCG
CCA-----------GATCCGGCCACATTTGGCGGGCGCGGTGGCCTCCACTTCTCCCGCCCGACATTGGCGAGGACATGC
CTGCCTGGGAGGCCAGCAAGGCGCAGTTCTAGCTCTGGCCTCCTCTCCCTCTCACTCACCGGATCCGGAAGAATCCAGCC
GGGAAAACGAGCTGTGGCAACCCGTTGCTCTGGCCATCGCCTCGTCCTGCAGCTCGTCCGCGGCGAAAGAAGGCAGGGTG
GAGCGGCGCCGGCTGGGGAAGATGGAGGTGGTCGACGGCTCGGGCTGCTTTCCACCTGCACCAAGCTCCGCCATGGCTAT
GCCGCTAGTGAGCACTGTCTCCGCCGATGGATCAGGCGAGCTCCCTTTTCGGCTGGCGCATACTGTCTCCGCCACCAGCC
ATCTTTCTCGTACTATCTCTGCCACGGCCATGCCGCAAGATGAGTGCCCGTGGGGAGTGCGTGCGGGGCCAGCGGG-AGT
GCGTGCGGGGGCGGCGGGCGTTCGGGTGCCTC
>chr1A_2
-ATGCTTGAAGAGAGGAGCGAGATGCGCGTCTCGCGTGATGGGGGTAGGTGGGGAAAATGGAGCGGCTCTCCGCGCCTCC
CCCGCTCTAGAAGGCTCCACGCCCGGATCGGTGCTGGGTCCTACATGGCAGTCAGGTGGCCATGGAGAGGCTCCCACGCG
TCCAGCCGCCATTAGCGGGTGGTTGGTGTAGCATGGGGCCACCCCAACCCGGTCCGCGCCCGCCTGGATCTCCGTACGCC
TCCCGCGCGCCGCACCTCGAGACGTGCCATGCGCCGTGCCCGCTGGGGGCGTGCACGTTGCTGGAAATCGCTCCCGAATC
CTCACCAAATGGCATGGCAGCGAGATGATATCGCCAATGATTATGGACTCCCCTGCGCGGAGAAATCGCGCATCCACCGT
AACTCCGTGATCATCGATCAGGATGATGCGGAGAGCATCACGCCGGAGAATCAGCTCGCCGTCATAGAACGTGAGCGAGC
GCGTCTGCAGATCGGCGGCGTAGGATACGTGCCATCTCTCGTCTGGCGCGTCGCCCTGCGTGTCGCGTGAGCACGACGTG
TG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------CTCCATC-------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------
>chr1D_641
TCGTGTCAAGCAGGTTCATGCGCTCCCGCCAGCTCTCCGGCGAGGTCTCCAGCGAGGTATCTAAAGTTGTTAACCAAAAT
TGATTTTTTTTCCTCATGATTTTTCTATCTCACGGCATCAAGTGCCGATATAACCAGAGATAATCTGTGCAATCGAAACA
GCAGCATGCATGTGTGTTTAACCTCATATGTACCAGTAGATGGACAGCATGCCAATCATATCATTAAGCAACCTTATTTT
TCCTGGTTAATCCGAGCATGATGGCTTTTGGCTTATCCCTTTAGCAAATAATTAGTGGCAACACATAAGATGGATGTTGC
TGCGGTTTTGATATCTTGAACCATCTTATCTTCTGCCTGATGTACTTCCTAGTATGATTCTGTGACTTCATTTATCCATG
TACAGTAAGTATGATTATGTGACTAGATGCTACACAAGCACGATGCATTCTATACATATGGAGCTTCACTTAGTTGAGAG
ACAAGACAATATCCTTCCTAATTATTTACCATTCGCAATCAGCGCTTACTTAGTGATTGATGATGCAAAGCAAGTACAGA
CCATTATCTATGTGTATGAATCCAGCATGCTGGCAAGTCCCCTGCCTTGGAATTTGAGCTGGACATGAAGATGAAGAAGC
TGGAAGCCTCGATAGCTCGGTTAAAGAACACTCCAGGACCAGATGCCTCTACGTTGTACGTACAATATCAGAGCATGCAA
CTTGATCATTTTCTCCCTTAATTTCCTGTTTATTTGTTTGCTTGACAGGACTTCGCACATATAATCTCATTTGACCTACC
ACTCTTTACCTGCAGGCGCTTGATGTCCAACGGACGTACGGTTCAGGGTGTAATCGATGCAGCTAACAAGTTGATATTTT
TGTGTATGATTTCTACTGCTGTTTATGGTCTCGATTCAGACAAGGTGGTAGAAGGCGAGGCTATTACCAAGGAAACCAGT
GAAGACAAGATCGAAAAATGAGAACCAAAGATGGCCAATCTAGTTTTCAGTTCAATTATGACCTCTACAGTTTGGCTAGC
TAACACTATGCTATCGTACCTTGTGATATTGTGTGACATGGTATCATGTTATTATATATCTATCTATCTATTGACTATTC
GAGTAGATTGTGTTCATGCATCCATCAAAACTGTAGCTTGATAGGAACATTCAGAGTTGGCCCGTCCTTAGCTAGCTTAG
GTGGCAGTATAGCATATGCGTGCGAGTTCGAGTCTGCTACGTGTTAGTACTTAGTAGTAAGAGTAGGATTAAGTTGTTTT
GTCGGTTGTTCTTGTATATATAGAAACACAACCTTGCGTGAGACTTTTTTTAGAAAAAATCGTGAGAGAAAAAATAAGGA
GAGAAATCTAGTGCGTGTGTTCGTCGTTCCTTGCGAG-------------------TCCCAACACACATACACAGTTCTC
GTGAATCAATCTAGCTCCTGGTGAAATCAAGCAAGGCCAGCGAAGATCCATGGCGGCGGCGCTTCGATGTACGGCGAGAA
GGCTCGGTGGCTCGCTGCTCCAGCGGACACAGGCTGCGGTCATGGAGTGTAAGCAATAATCTTGATCACGGCCGGTTGGT
CTTGGCCTAGCCGTCCGCGGGAGCTGGCAACAAACAGTTGCATGCACGCACGCACGGTATGGGTTGTGTGGCCGTTAGTC
AATGCATTCTGTGCGTGGGCGTGGATGTAGTTAGCTTGTTAGTGGCTGGGTCATGTGGTAGTGGCCGGTGTGGTGCGTGC
TGTTAGTGGGCGTTGGGTGTGTGTGCACCGGGTATAAGACCCCCCTCCTGTACTGCTTGTAGTCGCGCCGGTGTTGTAGC
CATGTAGACAGTGTAAAGAGGAAAAAGATTTGGGCGTTCGTGCGCCCGTGGTGGCGTTCGTGCGCCGGCCGGAAAATCTC
TCGTGACCACTGTTCTTTTTCTTCCACCTCCGTTCGAGTGAGAGGAGAGGTAGCTAGAGGGCCGCGGTTCCAACAATTGG
TATCAGAGCCACAAGGTTCGAGGAGCGGCCGTGGCGCGCGGTGGCGTCCACGGCGGACGCGGCCGACATGGAGGCATCGG
CTACGGCGCGTGGCGACGGCGACGCGCGGCGAGTCCGCGGCTGTGCGGTGTGATGTCGTGCGCGCAAAGAGCACGGTGGT
CGCGGAGACGAGGAGGCCGCAGAGGACTTGCGTGGTGGTGCAGAGGTCGCGGCGGCTCGGCGCGACAACCGTGGAGGCGC
GTGGCACGGAGCCGCGGCGGCCGCGGCGGACCTGCGTGGTGGCGCAGAGACTGCGGTGGCGCGGCGTGGCGGCATGGAGG
TGCAAACGCAGCGGTGCAGGGCAATAAGCCGCGGCGGCGAGCCGGGCGCGACCGGTGCGTGTTATGGGTGCGCACTGGAC
GCGTCGGGCGCGTCAGGACCGCGGGCGCACGTACGAGCGTGCGGTTGACGTTGGGAGGAGGCGCATGTCGCCGTTCTGCT
CGAGTCCGTGCTCGAGTTCGGCTACATCATTCCGCCGTTTGTAGCTGGCGGCTGCCATGGCGGACGCGAAGGCGGCGTGC
GGTGAGTCCATGGCGTGTGGTGTGGTCGGGCGCGTCGGGTGCACGCGGGACGTGCGGGACGCACTGGTGCGGTTGGGCTC
GTCGGGCGCGTCGGGTGTGCGCGGGACGTGCAGGGCGCAGAGGAACGCCTGACGTGTGTCGTCGGTGGAGAAGGAGCTCG
GCATGTGTTGCCGGAGTCGTGACGGAGCACGGTGCGACCGGCATCGGTGCGCCAGGTAACGACGACAACTACGCGAGCTA
CATCAACGCCGGCGACGGCGAGCACATGGCATGTCGCAGCGGTGCGTGGAGACGTCGACGCCCAGCCGTGTCAAGATTAG
AAGGGAAATTGTAAGCAATAATCTTGATCATGGCCGGTTGGTCTTGGCCTAGCCGCCCGCGGGAGCTGGCAACAAACAGC
TGCATGCACGTGCGCACGGTATGAGTTGTGTGGCCATTAGTCAATGCATGCTGTGCGTGGGCGTGGATGTAGTTAGCTTG
TTAGTGGCGGGGTCATGTGGTAGTGGCTGGTGTGGTGCGTGCTGTTAGTGGGTGTTGGGTGTGTGGGCACCGGGTATAAG
CCCCCCTTCTGTACTGCTTGTAGTCGCGCCGGTGTTGTTGCGATGTAGACATTGTAAAGAGAAAAAAGATTTGGGCGTTC
GTGCGTCGGCCGGAAAATCTTTCGTGTTCATTGTTCTTCTTCTTCCACCTCCATTCAAGTGAGAGGAAAGGTAGCTAGAG
GGCTGCGGTTCTAACATGGAGGAGTCACGCCGGCTCGGTGGCTCTCAGCTCCAACGAACGCAGGCGGCAGTCATGCCAAG
CAGGTTCATGCACTCCCGACAGTTCTCCAGCGAGGTATCGAATTCTGTGCAATCGGAAAAGCAACTTGCATGTGCCTCTT
GTATTAGCCAGAAACAAGAGGAAAATTACTTACTTATCATGGTCGTACTTGTTTAATCTGACCTGAACCTGTACTTCTTT
ACGTACTGCTGTTTGTAGCACATGACTGCGTGCAAATCATATCATTAAGAAACTTATTTTCCTGGTTGATCTGAGCATGT
CTTTTTACTCATCCCTTTAGCAAATCATTAAACGCATAAGATAAATGTTGCTGTGGTTTTGATATCTTGAACGCAATTGA
TGCACTTCGTATACTGGTCAGTTATTTATTTACTAAGCATTATTTACTAAGCACGGACACTGTTAGTCGATCAATCTACT
ACCGAAATCGATCCAGCCATATAAACTGATTTCAGATAATCCACTGAACAAGGCCCTTACTTAATTAGCAACCAAACCAA
ACATACATTATATATTAGCTCCATCTATATAGAAGTAACTATTGGGATGCATTCTGTATATTTTGAACCTCACTTAATTG
ATAGATAGG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------
>chr1D_1627
--------------------------------------------------------------------------------
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------AGGGCATGATTCTTCTTAACTATTTACCAATTACAATCAGTACTTACTTAATGATCGACTATGCAAATTAAGTA
TATTGATTGTTATCTATGTGTACCAATCCAGCATGCTCGTGCACACTCTAGACGCCAGATCCTGCAGAAGGAGGAGGAGC
TGTATGATGCGTTGTCTAAGGCTAACGAGCAGCATCTTTCAGCACAAGCCACTCAAAAAAGACCATTTGACCTTATGTAG
GATACAAAATCACTTGATCTCCTTCCTTAATGTCCTGTTTGTTTGTTTGACAGAAGTTGATA----CATATATATGATCT
CATTTGACCTACCCCTCTACCTTCAGGCGCTTGCAGGTGTACTCACAAAGGGCTCGGGGTGTGTTAGATTTGGCTTGCAA
GGTGACACTTTACACGTTTATGCTGGTGCTTTCCTGCTTGGTATCATTGGCGCTGGCAGGATGTTAGGGTTAGGGCCAGA
AATCAATGAAGACGACATTCAAAGACTGAGAATCAAAGATGGCTCAGTTGAATTATGACAACTGCAGAGTTTGGTTAGCT
AGCACCGCGCTATCTTTGGTGACTTTGTGTGAGAGAGTGAATTACAGAAAACATCGACATTAAAGGTTAGGGTTGCAAAA
ACCTCACTTCTACAGATTTGTGCCAAAAACCGCTAATTCGGAGGCTAATGTTTTGAAG--AAAAAACACTAGTTGGCAGC
TTTAGCCATTTAATGATG-ATTATGACATGTGGAGCCCGCTTTTATTGACGTGGCGTGACGGTTTGGACTAGATGTCGTT
AGACGTCTTTTTTCTTGTGAAAAACTCCTTTAGGAAACAAACAGCCAACTCCCCTGGGTCAAAGAGATAAAAAAGCACAA
ACTCTCCTCCCCTTGTGCCGTCGTACGTGCTGAGCGCCTCGCCGCCCCGGCAAGCCCCGCCACCGGTAGGCCCGCGCATG
CCACAGCCCCTGCCCTCCCTGGGCCGCCGCCCCTCCCCTATCACCCGTGCGCCGCCGTCGTTCCCTCTCCACATCAACCG
CCACCGTCGCGTTAGATCCGGCCACATCTGGTGGTCACGGTGGCCTCCACTGCTCCCGCCCGACATTGGCGAGGACGTGC
CTGCCTGGGAGGCTAGCAAGGCGCAGTTCTAGCTCTAAGATCCTCTCCCTCCCACTCACCAGATCCGGCAGAATCCGGCC
GGGAAAACGAGCTGCGGCTACACGTTGCTCTGGCCATCGCCTCGTCCCGCAGCTCGTCCGCCGG--AAGAAGGCAGGGTG
GAGCGGTGCCGGCGGGGGAAGATGGAGGTGGTCAATGGCTCGGGCTGCTTCTCACATGCACCAAGCTCCACCATGGCTAT
GCCGCTAGTGAGCACTGTCTCCGCCGCTGGATCAGGCGAGCTCCCTTTCCGGCTGGCGCATACTATGTCTGCCACCAACC
ATCTTTCTCGTACTGTCTCTACCATGGCCATGCCGCAAGATGAGTGCCTGTGGGGAGTGCGTGTGGGGCCAGCGGGTAGC
GCGTGCGGGGCCGGCGGGCGTTCGGGTGCCTC
>SNPs
S------------------------------------S---S---------------S--S--------S--S-------
--------------------------S--------------SS------S------S-----------S-----------
----------------------------------------S---------S-----------------------------
-----S------------------------------------------S--S----------------------------
-----S---------------------S-S---------S-------------------S--------------------
S------SSS-----S----------SS-----------S----------------------------------------
--S-------------------------------------------------------SS------------------S-
---SSSSSSS-SSSSSSSSS--SSSSSSS-SSS---SSSSS-SSSSSSS-SSS-SSSSSSS-SS-SSSSS-SSSS-SSSS
SSS-SSSSSSSSS--SSSSSSS--SSSSS--SS-S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
-----------S-------S--S-S------------------S-S---------------S------------------
------------------------S----S---SSSSSSSSSSSSSSSSSSSSSSS-----------------S------
----------------S----------------------------------------------------SS---------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
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------------------------S----SS----------S----S------S--------------------------
-----------S------S---S----S----------SS-------------------------------S--------
------------------------S------------------------------------------S------S-----
--S--------------S-----------S----------------------------------------S---------
-S--------------------------------S--------S------------------------------------
--------------S-----------------------------------S-----------------------------
-S--------------------------------------------------------------S---------------
-------------------------------S----------S--------------------------------S----
-S---S---S------S---------------------------------------------------------------
-------S-------------------------------------------------------------------S----
--S-----------------------------------------------------------------S-----------
-------------------------S------------------------------------SSSS--------------
--------------------S-S---S-----------------------------------------------------
----------------------S-----------------S-----S------S--------------------------
-------------S------------------S-----------------------------------------------
------S-----------S------------------------------------------S-------S-------S--
---S--------S-S----SS----------S-------S------------------SS--------------------
---S-S-S---S-S-SSSS-------------------S------------------S-----------------S----
------S-----SS-SS----------------------------------------S----------------------
-------------SS-----S----------------------------------------SS---------S-------
---------S---------SS----------S-----------S-S--------S------------S-------S----
---------------------------S---S--S-S--------------S------------------------S---
-------------S----------------------SSSS-----------S--------S-------S-------S---
--------------S---S--S-------------------------S-------------S-SSS--------------
------S------S-------------------S-S--------------SS---S-------------S----------
--------------------------S---------------------S---------------S-S--S-------S--
--------------S-----S---S-----------------------S--------------S---------------S
----------S---------------------
>forward_580
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TGAGCCATCCTTGCATCTCC------------------------------------------------------------
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>reverse_4267
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--------------------------CCGCTTGCAGGTGTACTCA-----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------
>forward_583
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---GCCATCCTTGCATCTCCTCT---------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4374
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-----------------------------------------------------CGGCAGGATGTTAGGGTTAGG------
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--------------------------------
>forward_4267
--------------------------------------------------------------------------------
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-------CCTACCCCTCTACTTGCAGC-----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------
>reverse_5184
--------------------------------------------------------------------------------
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---------------------------------------------------------------CGAAAGAAGGCAGGGTG
GAG-----------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------
