>input_sequence_59060
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------------------------------------------------ATGTTCCTCTCTTATGT-----TCCACACTAT
CCCTT---GGAATTAATCATGGTTGTGGACAGGATGGAGTCAGCATCCAAGGAGATGGCACTGAGGTGCACCACGGAGAA
GGTGACAGCGTCGAGGTGCTCCACACACAAGGAGGAGGGAGCACACATCTTTGAGATCGCCGGGTACAGCCTCAAGAAGG
ATATGGGTGTCGAGAAGTTTGTCCGGTCGGTCACCTTCACTGTCGGTGGGTACGACTGGTCCATCAGATTTTATCCCGAA
GGTACCACCGAGTCGCCCGAAGGGTGTATGGGGATCTGTCTTGAGCTCATGAGCAGCAATGCCGAGGTGCGGACGTTCTT
TCGGCTTGGATTGGTAAAGCATGAGACAGGGTTGATTGGCTCAATGTTTACGCCAAACAATAAGGTGTTCAGCTCCAAGA
CCAGGAACAGTCGTGAGTATCATCTGTTCATACTAAGAAGCAGTCTTGAGGCGAAACCACTAAAGTACCTTCAGGATGAT
TTTCTCATAATCAAATGTAATATTACGGTAATCAAAGAATCTGAGGTTTATGAAACCATGGGGCACTCTGAAATTGAGGT
GCCACCGTCAGACATCATGGAGCATCTCGCAAAGCTGTTGGACACTAAAGAGGAAGCAGATGTCACTTTCAGTGTTGGAG
GCGAGACCTTTCAGGCGCACAAGATTTTGCTTGCCATGCGATCACCTGTCTTCAAAGCAGAACTCTTTGGGCCGATGAAG
GAGAAGAGGATGCGGTGTTTGACCATCAAAGACATGCAGCCCGCTGTTTTCAAGGCTCTGCTGCATTTCATTTATACAGA
TTCATTGCCTGACTTGGATGATCTTGAAGGCGATGATAAGTGTGAAATGATCCGGCATTTGCTGGTAGCTGCAGATAAGT
ATGCCATGGACAGGCTGAAGATTATGTGTCAAAACATCCTTGGCAAGAGTCTTGATGTGGAGAACGTGGCAACTACATTG
GCTTTAGCTGATCAGTATAGCTGTGACAAGCTTAAAGATGTTTGCATTGAATTTATTGCCTCTTCAGATAAGATGGATGA
TGTGGTGGCAACCAAAGGTTATGCAAATCTCAAAAGATCTTGCCCGTCTGTCTTGATAGATGCTTTAGAGAAGAGAAGCA
GGCCTCGCATA---TAG---------------------------------------------------------------
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>chr6D_1_TraesCS6D01G256000
CCGAAACAACCGATTTAAGGCCCAGCCCACTTACAGCCCAGCCGACCAGGCACTCCGCGTCC-----------ACACTCC
ACACCCCATTCTCC-A-----------AAAAAAAAAACTCCACGCCGACGGAGTCGCGCAGACGCGCACAGGCACAGCCA
CCGCAGCGCAGGCGAGCGAGACGCGCATGCCCAACCCTAGCGAAGCGAGTTGCGAGCA--------CATCCCTGCATCGC
CACGCCTCCGGGCTCTGGCCCCGCTCCGCCGCCAGACGCCTGACCTACTCGCCTAGTCGTCGTCTGATCTCCGCCGCATC
CGGCACCGCCCGCCGCCCACCGGCCCTCGCGTCCAGGGCTCCAGGCGTTCTCCATCCCCGGCTCCCCGCACAGCCTAAAA
AAACTGCAGGTAAAATCCTCGATTGATGTTGGCTATTATGTGCTGTGTTGCTAGTCTGCGAGTGCTCGATTAACACAATT
GGAGGAACTTGCGGCTCTAAATCTAGCACTATATCTTTCATGTTCC-TTTTTTGTGTTCTTCTTCAGAAGTTCAGGTCAT
CAGATGGCTGAGACTGTAAGCTGCTTGGGTTGTGCTAAACTTGTAATGCACCTTCCCCAATTAGTACTAAACTGTAATCT
TGTAAACTATTGTGGTAAACTGGTAATGCTCCTGCC-------CCATGGCCATGGGGGATTGTGAGGTTGTGTTCTTCTG
CTCTGTTCTTATTAACT---------------------------------------------------------------
--------------------------------------------------------------TATTACTTTTAGCCAAGC
TACCACTAGCTTAGCTAATAGTTATACTTGGCGTTTTGCTAGCTTCGTTTTTGTGTTGTTGTGTATAACAGCCCTGCCCC
GTGCACTGTTGTATAGCATGTTCACTTCTCAGCTTTTCACACATCATATGGTCTGCTTGCTCCCAGCCCCTCATTAGTTT
GTGAAGTTTTCACAAAATGTTGTTCTCTTGTTTTT-CCTAAATTCGCGTCAACTTTGGTTAATTTGTGTAAACCGAAACC
ATGCCCAAGCCCAATGCATAGAGTTAC---TCCTTGAAAAAGCTGTCTATGTTCCTCTCTTATGT-----TCCACACTAT
CCCTT---GGAATTAATCATGGTTGTGGACAGGATGGAGTCAGCATCCAAGGAGATGGCACTGAGGTGCACCACGGAGAA
GGTGACAGCGTCGAGGTGCTCCACACACAAGGAGGAGGGAGCACACATCTTTGAGATCGCCGGGTACAGCCTCAAGAAGG
ATATGGGTGTCGAGAAGTTTGTCCGGTCGGTCACCTTCACTGTCGGTGGGTACGACTGGTCCATCAGATTTTATCCCGAA
GGTACCACCGAGTCGCCCGAAGGGTGTATGGGGATCTGTCTTGAGCTCATGAGCAGCAATGCCGAGGTGCGGACGTTCTT
TCGGCTTGGATTGGTAAAGCATGAGACAGGGTTGATTGGCTCAATGTTTACGCCAAACAATAAGGTGTTCAGCTCCAAGA
CCAGGAACAGTCGTGAGTATCATCTGTTCATACTAAGAAGCAGTCTTGAGGCGAAACCACTAAAGTACCTTCAGGATGAT
TTTCTCATAATCAAATGTAATATTACGGTAATCAAAGAATCTGAGGTTTATGAAACCATGGGGCACTCTGAAATTGAGGT
GCCACCGTCAGACATCATGGAGCATCTCGCAAAGCTGTTGGACACTAAAGAGGAAGCAGATGTCACTTTCAGTGTTGGAG
GCGAGACCTTTCAGGCGCACAAGATTTTGCTTGCCATGCGATCACCTGTCTTCAAAGCAGAACTCTTTGGGCCGATGAAG
GAGAAGAGGATGCGGTGTTTGACCATCAAAGACATGCAGCCCGCTGTTTTCAAGGCTCTGCTGCATTTCATTTATACAGA
TTCATTGCCTGACTTGGATGATCTTGAAGGCGATGATAAGTGTGAAATGATCCGGCATTTGCTGGTAGCTGCAGATAAGT
ATGCCATGGACAGGCTGAAGATTATGTGTCAAAACATCCTTGGCAAGAGTCTTGATGTGGAGAACGTGGCAACTACATTG
GCTTTAGCTGATCAGTATAGCTGTGACAAGCTTAAAGATGTTTGCATTGAATTTATTGCCTCTTCAGATAAGATGGATGA
TGTGGTGGCAACCAAAGGTTATGCAAATCTCAAAAGATCTTGCCCGTCTGTCTTGATAGATGCTTTAGAGAAGAGAAGCA
GGCCTCGCATA---TAGAGCAGCTCATGCGTACTAAAATCAGTTACATGCGGTTGTTGAGGTTTCTTATGTTATCTGCAC
CTTTCCTGAAACTTTTCGACGCTCAAATAGTGTAATAGCATGTGTGGAACTTTTATCATCTCAAAATGAATGAATGTTAG
TATGTTACATAACAGTATCTTGTTGCTTTGGGAATATAACCACATTACATCATAAATAACAACTACATTATACAACCGTG
CTGTTGACTGTGTTCCTTTGGGAACTGGAAGATGTCACATCATATACAATCTGGTGCATTGGAAAAG-------------
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-----------------AAAAAAACTCGGCGCATAATTATTCGAGGCCCGGAAGC-------------------------
----------------------------------------TGTGAGGAATGAATGTTCCTGAATTTTTATTGATCCATTG
CAACCCTTAGATGTACTTATATTTGTCTGGGATACTACTGAACTGAGCCTGGAAGGTAAGGTTTACTCAATTTATTCGGT
CACTTGATAAACTGTTTAATTTCAATTAATAATCTTACTCCAAAGGCCAAACCAGGTGTCGGAGTAAATGGCCACGGTTA
GCCTAACCGACTCACCCTGGCTCTTCGAAAAATTATCAGGCCATTCAAGCCTTCAAGCGTACAAAGCATAGGACCGCCTT
CCCTAGGCCGACTATCCCCAGGGCCGACTCCCAGAAGGCGACCCAGTCTCAGAAAACCTCCCCCAAGAAAGATACGAGAT
AGCCGACTCCAGGAAGCCGGCCTCAAGAGGACCGACTCCCAGAAGCCGGCCATGAAGAAGGCCGACTCCCAGAAACCGGT
CATGAAGAAGGCCGACTCCCAGAAGCCGGCCAAGACTGCACCCCCCAAGACTATGCCCACATAACGGTGATAGGATGGGG
CGTGGCCGCAGTACAGCCCACTACCCCCGAATCCCGGAGCAGGCATGGCCACAGGGCGCCGTACGGGCCAGCCATCCCCC
GTCCGGCGCGGCACTGTAGCCATGTTGGCCCCGACGTCACCCACGACAGATGCCAGAACGGCCCGCGGGCGG
>chr6A_1
CCGAAACAACCGATTTAAGGCCCGGCCCACTTACAGCCCAGCCGACCAGGCACTCCGCGTCCGCGTCTCTTCCACACTCC
ACACCCCATTCTCAAAAAACAAAAAACAAAAAAAAAACTCCACGCCCACGGAGTCGCGCAGGCGCGCACAGGCACAGCCA
CCGCAGCGCAGGCGAGCGAGACGCGCATGCCCAACCCTAGCGAAGCGAGTTGGGAGCAGCCGAGCACATCCCTGCGTCGC
CACGCCTCCGGCCTCCGGCCCCGCTCCGCCATCAGATGCCTGACCTACTCGCCTAGTCCTCGTCTGATCTCCGCCGCCCC
CG--------------CCACCGGCCCTCGCGTCCAGGGCTCCAGGCGTTCTCCATCCCCGGTTCCCCGCACAGCCTAAAA
AAACTGCAGGTAAAATCCTCGATTGATGTTGGCTATTATGTGCTGTGTTGCTAGTCTGCTAGTGCTTGATTAATACAATT
GGAGGAACTTGCGGCTCTAAATCTAGCTCTACATCTTTCATGTTCC-TTTTTGTG----TTCTTCAGAAGTTCAGACCAT
CAGATGGCTGAGACTGTAAGCTGCTTGGGTTGTGCTAAACTTGTAATGCACCTTCCCCAATTAGTACTAAACTGTAATCT
TGTAAACTATTGTGGTAAACTGGTAATGCTCCTGCC-------CCATGGCCATGGGGGATTGTGAGGTTGTGTTCTTCTG
CTCTGTTATTATTAACT---------------------------------------------------------------
--------------------------------------------------------------TATTACTTTTAGCCAAGC
TACCACTAGCTTAGCTAATAGTTATACTTGGCGTTTTGCTAGCTTCGTTTTTGTGTTGTTGTGTATAACAGCCCTGCCCC
GTGCACTGTTGTATAGCATGTTCAGTTCTTAGCTTTTCACACATCATATGGTCTGCTTGCTCCCAACCCCTCATTAGTTT
GTGAAGTTTTCACAAAATGCTGTTCTCTTG-TTTT-CGTGAATTCGCGTCAACTTTGGTTAATTTGTGTAAATCGAAACC
ATGCCCAAGCCCAATGCATAGAGTTAC---TCCTTGAAAAAGCTGTCTATGTTCCTCTCTTATGCTCAGGTCCACACTAT
CCCTTCTTGGAATTAATCATGGTTGTGGACAGGATGGAGTCAGCATCCAAGGAGATGGCACTGAGGTGCACCACGGAGAA
GGTGACAGCATCGAGGTGCTCCACACACAAGGAGGAGGGAACACACATCTTTGAGATCGCCGGGTACAGCCTCAAGAAGG
ATATGGGTGTCGGGAAGTTCGTCCGGTCTGTCACCTTCACTGTCGGTGGGTACGACTGGTCCATCAGATTTTATCCCGAA
GGTACCACCGAGTCGCCCGAAGGGTGTATGGGGATCTGTCTTGAGCTCATGAGCAGCAATGCCGAGGTGCGGACGTTCTT
TCGGCTTGGATTGGTAAAGCATGAGACAGGGTTGATTGGCTCAATGTTTACGCCAAACAATAAGGTGTTCAGCTCCAAGA
CCAGGAACAGTCGTGAGTATCATCTGTTCATACTAAGAAGCAGTCTTGAGGCGAAACCACTAAAGTACCTTCGGGATGAT
TTTCTCGTAATCAAATGTAATATTACGGTAATCAAAGAATCTGAGGTTTATGAAACCATGGGGCACTCTGAAATTGAGGT
GCCACCGTCAGACATCATGGAGCATCTCGCAAAGCTGTTGGACACTAAGGAAGAAGCAGATGTCACTTTCAGTGTTGGAG
GCGAGACCTTTCAGGCGCACAAGATTTTGCTTGCCATGCGATCACCTGTCTTCAAAGCAGAACTCTTTGGGCCGATGAAG
GAGAAGAGGATGCGGTGTTTGACCATCAAAGACATGCAGCCCGCTGTTTTCAAGGCTCTGCTGCATTTCATTTATACAGA
TTCATTGCCTGACTTGGATGATCTTGAAGGCGATGATAAGTGTGAAATGATCCGGCATTTGCTGGTAGCTGCAGATAAGT
ATGCCATGGACAGGCTGAAGATTATGTGTCAAAACATCCTTGGCAAGAGTCTTGATGTGGAGAACGTGGCAACTACATTG
GCTTTAGCTGATCAGCATAACTGTGACAAGCTTAAAGATATTTGCATTGAATTTATTGCCTCTTCAGATAAGATGGATGA
TGTGGTGGCAACCAAAGGTTATGCAAATCTCAAAAGATCTTGCCCGTCTGTCTTGATAGATGCTTTAGAGAAGAGAAGCA
GGCCTCGTATAGCATAGAGCAGCTCATGCGTACTAAAATCAGCTACATGCGGTTGTTGGGGTTTCTTGTGTTGTCTGCAC
CTTTCCTGAAATTTTTCGA---------AGTGTAATATCATGTGTGGAACTGTTATGATCTCAAAATGAATGAATGTTAG
TATGTTACATAACAGTATCTTGTTGCTTTGGGAACATAACCACATTACATCATAAATAACAACTACTTTATGCAACCGTG
TTGTTAACCGTGTTCCTTTGGGAACTGGAAGATGTCACATCGTATACAATCTTTTTTTTTTTTTGAGGAAAGAAGGCAGG
CTTTATTCATAGGATTACAAATAAATCATGAGGAATACACAACCATGTGTGTCTACCCTGGGTAGGGTAACACCTAGCCT
AGCCATCTTATGAGCTTCAAAATTATAAGCTTGAGCTTCATGAGCAAAAACACATGAACTAAACATATATTCTAACTTTA
TTATTTATTTGATAACTCCTCCATCCGCGCCTCCAACTCCATCTCGAATATGGTTAATGACCTCTTTACAATCTGAAGCA
ATATAAAGGTGTTGCATACCAAGATCATGAGCAAGTGCTAGTGCCTCTCTGCAGCCATAGCTTCCAACACTGTTGGAGAA
ATAAGACCTTGAAAAGAAAAAAAACTCGGCGCATAATTATTCGAGGCCCAGAAGCTGTGAATACATTCACGTGCTATTCA
TATTTTCGGAAACTTATATGATCGGTTGCACATATAACATTGTGAGGAATGAATGTTCCTGAATTTTTATTGATCCACTG
CAACCCTTAGATGTACTTATATTTCTCTGGGATACTACTGAACTGAGCCTGGAAGGTAAAGTTTACTCAATTTATTTGGT
CACTTGATAAACTGTTTAATTTCAATTAATCATCTTACTCCAAAGGCCAAACCAGGT-----------------------
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>chr6B_1
CCGAAACAACCGATTTAAGGCCCAGCCCACTTACAGCCCAGCCGACCAGGCACTCCGCGTCC-----------ACACTCC
ACACCCCATTCTCCAA-----------AAAAAAAAAACTCCACGCCCACGGAGTCGCGCAGGCGCGCACAGGCACAGCCA
CCGCAGCGCTGGCGAGCGAGACGCGCATGCCCAACCCTAGCGAAGCGAGTTGCGAGCA--------CATCCCTGTATCGC
CACGCCTCCGGGCTCCGGACCCGCTCCGCCGTCAGACGCCTGACCTACTCGCCTAGTCCTCGTCTGATCTCCGCCGCCTC
CGGCACCGCCTGCCGCCCACCGGCCCTCGCGTCCAGGGCTCCCGGCGTTCTCCATCCCCGGCTCCCCCCACAGCCTAAAA
AA-CTGCAGGTAAAATCCTCGATTGATGTTGGCTGTTATGTGCGGTGTTGCTAGTCTGCTAGTGCTGGATTAACACAATT
GGAGGAACTTGCGGCTCTAAATCTAGCTCTGTATCTTTCATGTTCCTTTTTTGTG----TTCTTCAGAAGTTCAGGTCAT
CAGATGGCTGAGACTGTAAGCTGCTTGGGTTGTGCTAAACTTGTAATGCACCTTCCCCAATTAGTACTAAACTGTAATCT
TGTAAACTATTGTCGTAAACTGGTAATGCTCCTGCCCCATGGGCCATGGCCATGGGGGATTGTGAGGTTGTGTTCTTCTG
CTCTGTTATTATTAACTTACTCCCTCCGTCCCAAAATTCTTGTCTTAGATTTGTCTAAATACGGATGTATCAAGTCACGT
TTTAGTATTAGGTACATCCGTATCTAGACAAATTTAAGACAATAATTTTGGGACGGAGGGAGTATTATTTTTAGCCAAGC
TACCACTAGCTTAGCTAATAGTTATACTTGGCGTTTTGCTAGCTTCGTTTTTGTGTTGT---GTATAACAGCCCTGCCCC
GTGCACTGTTGTATAGCATGTTCACTTCTCAGCTTTTCACACATCATGTGGTCTGCTTGCTCCCAACCCCTCACTAGTTT
GTGAAGTTTTCACAAAATGTTGTTCTCTTG-TTTTTCCTAAATTCGTGTCAACTTTGGTTAATTTGTGTAAACCGAAACC
ATGCCCAAGCCCAATGCATAGAGTTACTCCTCCTTGAAAAAGCTGTCTATGTTCCTCTCTTATGCTCAGATCCACACTAT
CCCTTCTTGAAATTAATCATGGTTGTGGACAGGATGGAGTCAGCATCCAA------------------------GGAGAA
GGTGACAGCGTCGAGGTGCTCCACACACAAGGAGGAGGGAACACACATCTTTGAGATCGCCGGGTACAGCCTCAAGAAGG
ATATGGGTGTCGAGAAGTTCGTCCGGTCGGTCACCTTCACTGTCGGTGGGTACGACTGGTCCATCAGATTTTATCCCGAA
GGTACCACCGAGTCGCCCGAAGGGTGTATGGGGATCTGTCTTGAGCTCATGAGCAGCAATGCCGAAGTGCGGACATTCTT
TCGGCTTGGATTGGTAAAGCATGAGACAGGGTTGATTGGCTCAATGTTTACGCCAAACAATAAGGTGTTCAGCTCCAAGA
CCAGGAACAGTCGTGAGTATCATCTGTTCATACTAAGAAGCAGTCTTGAGGCGAAACCAGTAAAGTACCTTCAGGATGAT
TTTCTCATAATCAAATGTAATATTACGGTAATCAAAGAATCTGAGGTTTATGAAACCTTGGGGCACTCTGAAATTGAGGT
GCCACCGTCAGACATCATGGAGCATCTCGCAAACCTGTTGGACACTAAGGAGGAAGCAGATGTCACTTTCAGTGTTGGAG
GCGAGACCTTTCAGGCGCACAAGATTTTGCTTGCCATGCGATCACCTGTCTTCAAAGCAGAACTCTTTGGGCCGATGAAG
GAGAAGAGGATGCAGTGTTTGACCATCAAAGACATGCAGCCCGCTGTTTTCAAGGCTCTGCTGCATTTCATTTATACAGA
TTCATTGCCTGACTTGGATGATCTTGAAGGCGATGATAAGTGTGAAATGATCCGGCATTTGCTGGTAGCTGCAGATAAGT
ATGCCATGGACAGGCTGAAGGTTATGTGTGAAAACATCCTTGGCAAGAGTCTTGATGTGGAGAACGTGGCAACTACATTG
GCTTTAGCTGATCAGTATAGCTGTGACAAGCTTAAAGATGTTTGCATTGAATTTATTGCCTCTTCAGATAAGATGGATGA
TGTCGTGGCAACCAAAGGTTATGCAAATCTCAAAAGATCTTGCCCGTCTGTCTTGATAGATGCTTTAGAGAAGAGAAGCA
GGCCTCGCATA---TAAAGCAGCTCATGCGTACTAAAATCAGTTACATGCGGTTGTTGAGGTTTCTTATGTTATCTGCAC
CTTTCCTGAAACTTTTCGACGCTCAAATAGTGTAATAGCATGTGTG-AACTGTTATCATCTCAAAATGAATGAATGTTAG
TATGTTACATAACAGTATCTTGTTGCTTTGGGAACATAACCACATTACATCATAAATAACAACTACATTATACAACCGTG
CTGTTAACTGTCTTCCTTTGGGAACTGGAAGATGTCACATCATATACAATCTGGTGCATATGAAAAG-------------
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-----------------AAAAAAACTCGGCGTATAATTATTCAAGGCCCAGAAGCTGTGAATACATTCACGTGGTATTCA
TATTTTCGGAAACTTATATGATTGGTTGTATATATAACATTGTGAGGAATGAATGTTCCTGATTTTTTATTGATCCACTG
CAACCCTTAGATGTACTTATATTTGTCTGGGATACTACTGAACTGAGCCTGGAGGGTAAAGTTTACTCAATTTATTCGGT
CACTTGATAAACTGTTTAATTTCAATTAACCATCTTACTCCAAAGGCCAAACCAGGT-----------------------
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>chr3D_2654
CAAACAT-------------------------------------------------------------------------
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-----------------------------------------------------AGTTGTCGGAGTAAATGGCCACGGGTA
GCCTAACCGACTCCCCCTGGCTCTTCGAAAAATTATCAGGCTATTCGAGCCTTCATGCATACAAAGCATTGGGCCGCCTT
CCCC-GGCCGGCTATCCCCAGGGCCGACTCCCAGAAGGTGACCCAGTCTCAGAAAACCTCCCCCAAGAAAGATACGAGAT
AGCCGACTCCAGGAAGCCGGCCCCAAGAGGACCGACTCCCAGAAGCCGGCCATGAAGAAGGCCGACTCCCAGAAGCCGGC
CATGAAGAAGGCCGACTCCCAGAAGCCGGCCAATACTGCACCCACTAAGACTGTGCCCACATAACGGTGATAGGATGGGG
CGTGGCCGCAGTACAGCCCACTACCCCCGAATCCCGGAACAGGCATGGCCACAGGGCGCCGTACGCGCCAGCCTTCCCCC
GTCCGGCGCGGCACTGTAGCCATGTTGGCCCCGACGTCACCCACGACAGATGCCAGAACGGCCCGCGGGTGG
>SNPs
--------------------------------------------------------------------------------
----------------------------------------------S--------------S------------------
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---------------S---------------S--------------------------S------------------S--
----------S---------------------------------------------------------------------
-----------------------------------------------------------S------S-------------
---------------------------S------------------------SSSSSSS---------------------
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-------S------------------------------------------------------------------------
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-----------------------------------------------------------------S--------------
------------------------------S-------------------------------------------------
----------------------------------------------------------------S---------------
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----------------------------------------S---------------------------------------
-------------------S------------------------------------------------------------
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------------------------------------------------S-------------------------------
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---------------------------------------------------S----------------------------
----------------------------------S---------------------------------------------
-----S------------------------------------------------------S-------------------
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-------------------------------------------------S------------------------------
-----------------------------------------------------------------------------S--
-----------------------------------------------------------S--------------------
------------------------------S----------------------------------------------S--
-------------S---------------------------S----S--------S--S----------S--S-------
---SS-----S---------------------------S-----------------------------------------
----------------------S---------------------------------------------------S----S
---------------------------------S---------S-S------S---------------------------
--------------------------------------S--------------------------S-------S------
---------------------------------------------------------------------S--
>forward_467
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-----------------------------------------------TTGCTAGTCTGCGAGTGCTC-------------
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>reverse_1809
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------------------------------------------------AGAGGAAGCAGATGTCACTTTCA---------
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>forward_1321
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---------------------CACACACAAGGAGGAGGGAG---------------------------------------
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>reverse_3520
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-------------------------------------------------------------------------------T
CATGAAGAAGGCCGACTCC-------------------------------------------------------------
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------------------------------------------------------------------------
