>input_sequence_59059
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----------------------------------------------ACTAGCCCAACATCCGAATAG---TCCTATAGCC
CAGAACACAACGATGGGCCGACAGGCTAACGTTTCGTGGCCCTTACGAAACGAGAGCTTTTTAGAGCCCTCGCCGCATCC
CGGAAGAGGCAGACAGCAAAACGAAAGGACGCCGCCGGCCCTAGTTCGTTTCAGT-----GCCTCCGCAGTCTCCACCAC
ACGGACTTGCCACCATGACG---GCGGCTCCTCTTTTATCGTTGACGGATGCGGCGACGGCGACGGCGACGGCGGCGCTG
GCCCCCGGCCGAGCGCCCGCCAGAGCCCGCATTCAGGCCGCCCCCCGCCACCCCGCCACCGTCTCGCTGAGATGCCACCG
CGCTCGGCCCCTAACCGCGGCCGCCGCCACGGGCGACTCGCCGTCGTCCGCCGCGTTCCACGGCGAGTGCTTCGTCGTCG
GGGACAACATCGACACCGACCAGATCATCCCGGCCGAGCACCTGACCCTGGTGCCGTCCAAGCCCGACGAGTACCGCAAG
CTCGGCTCCTTCGCCTTCGTGGGCCTCCCCGCCGCGGCCTACCCGATTCCGTTCGTGGCCCCTGGCGAGGAGTCGTCCCG
CTACGCCGTCATCATCGGCGGCGCCAACTTCGGGTGCGGCTCCTCCCGCGAGCACGCGCCCGTCGCGCTCGGAGCCGCCG
GCGCGCGCGCCGTTGTGGCCGAGGGCTACGCCCGCATCTTCTTCCGCAATTCCGTGGCCACCGGGGAGGTGTACCCCCTG
GAGCTCGCGGACAGTGGTGCCAGCAAGGAGTGCAAGACAGGGGATGTGGTCACAGTGGACCTCGATAACTCGGTCTTGAT
TAACCACACATCCGGAAAGCAGTACAAGCTGAAGCCTATTGGTGATGCAGGCCCGGTTATTGAGGCCGGGGGGATCTTCG
CTTATGCTCGGAAGACTGGGATGATCGCGTCCAAATCTGCTTGAACAAAAAGTGAGTATTCTTCTACTGCATATTAAGTC
ACAGAAGTTT-CAACATTGTTGATTCGAATTGGTGCTGTGCTTTGTGTGTGACTATGACGCGAACTTAAGATTATTACAT
ATTCAGACGAGCATCAGTTTTCTGCCATTCCGATTGGGCTAACCTTTATCTTGAAAAAAGTGTTCCGTTCAGTTGATCAT
GTAAGCAGGCAATAAA----------------------------------------------------------------
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--------------------------------------------------------------------------
>chr6D_1_TraesCS6D01G225800
AATCCAGAGGGAGCGTCCAACATGCGACATGTGACGTCAGCTAGATGCATCACTTGGCGTGCTCTCAGCCTACAAAAAGG
ACCCTTGTGGTTCCTGCTAGGGCTTTTCTTTTGCGGGTAGAAATTTGTATTACTCAAAACCTATAGTCCTTACAATCCAT
CGCAGCCAACTTCAAAGCATCTGGAGGTCCCGAACCAAGCCAAGTCATGGTTCTACCCTCGCTACAAGCAAAATATGCGA
AACTATCACTAACTTTATTTTAGCTACGATTTACATGAGTAATACAAAAATCACGGAGGGACAAAAGATATCTAATCTCC
CTGATGATGGACGAGTAAACCGATCTATCAATATCTGAAGCTTGAATCAATTTTACTGCCATTAGGGAGTCCATCTCAAC
CTGCACTGGCAAGTCGCTTCTCTGGATAGAAAAAGATATACCTTCCATGCATGCACATACCTCAGCTTCGAGCGCGTCCC
GATAGTGAAACAATTGC-TACAGGAAGAGAAAATGATGGCATCCCTCTCATCCCTTAACACCATACCTGCACCAGCCGAG
CCATCCTATGCAAATGAGCTGTCAGTATTTAACTTGACAAAGCCAAAGCTAGAAGCAGCCCACTCGGGGTCTGCACTCTT
GTCCATAAGAGGCCGAATTGCTCCATATGACATCAGGGACTTTCCCTTGGAAGGATCAGCTGCAAGATTAGATTTTATGC
CAATGAGAGAGTCCAGGTAACTCGTCAAAAATCTGCGTGAAACTTCCATGG-TGGTGGGGCTTTGTTGTGAACAATCTCG
TCAAAAATCTGCTAGGGCTAACCTTTAGTGTTTTGTTTTTAATAGTTTAGATTGCTTACCACATGTGTCACATGGTGAGG
CCTAACTC-TAGTTAGTTGCTCTCGCAAGTCTAATT-AAAATTTTGTACTGTATACTTGCTTGTTTTCGTAAGCCGAAAT
GAAGCCTGT--TTAAAAAAAACGAAATGAAGCCTAATCGAAAAAGAACTAGCCCAACATCCGAATAG---TCCTATAGCC
CAGAACACAACGATGGGCCGACAGGCTAACGTTTCGTGGCCCTTACGAAACGAGAGCTTTTTAGAGCCCTCGCCGCATCC
CGGAAGAGGCAGACAGCAAAACGAAAGGACGCCGCCGGCCCTAGTTCGTTTCAGT-----GCCTCCGCAGTCTCCACCAC
ACGGACTTGCCACCATGACG---GCGGCTCCTCTTTTATCGTTGACGGATGCGGCGACGGCGACGGCGACGGCGGCGCTG
GCCCCCGGCCGAGCGCCCGCCAGAGCCCGCATTCAGGCCGCCCCCCGCCACCCCGCCACCGTCTCGCTGAGATGCCACCG
CGCTCGGCCCCTAACCGCGGCCGCCGCCACGGGCGACTCGCCGTCGTCCGCCGCGTTCCACGGCGAGTGCTTCGTCGTCG
GGGACAACATCGACACCGACCAGATCATCCCGGCCGAGCACCTGACCCTGGTGCCGTCCAAGCCCGACGAGTACCGCAAG
CTCGGCTCCTTCGCCTTCGTGGGCCTCCCCGCCGCGGCCTACCCGATTCCGTTCGTGGCCCCTGGCGAGGAGTCGTCCCG
CTACGCCGTCATCATCGGCGGCGCCAACTTCGGGTGCGGCTCCTCCCGCGAGCACGCGCCCGTCGCGCTCGGAGCCGCCG
GCGCGCGCGCCGTTGTGGCCGAGGGCTACGCCCGCATCTTCTTCCGCAATTCCGTGGCCACCGGGGAGGTGTACCCCCTG
GAGCTCGCGGACAGTGGTGCCAGCAAGGAGTGCAAGACAGGGGATGTGGTCACAGTGGACCTCGATAACTCGGTCTTGAT
TAACCACACATCCGGAAAGCAGTACAAGCTGAAGCCTATTGGTGATGCAGGCCCGGTTATTGAGGCCGGGGGGATCTTCG
CTTATGCTCGGAAGACTGGGATGATCGCGTCCAAATCTGCTTGAACAAAAAGTGAGTATTCTTCTACTGCATATTAAGTC
ACAGAAGTTT-CAACATTGTTGATTCGAATTGGTGCTGTGCTTTGTGTGTGACTATGACGCGAACTTAAGATTATTACAT
ATTCAGACGAGCATCAGTTTTCTGCCATTCCGATTGGGCTAACCTTTATCTTGAAAAAAGTGTTCCGTTCAGTTGATCAT
GTAAGCAGGCAATAAACACCTCCCTTTGAGAGGTTTGTCTA--------ACTAGTAGAAACATATGCTTGAGCCATATGG
ATCTTGCTTTTGATTCTTACGGTATAATAGTTGCACGCCTTGTTAAGTACTGCATCTGTATGCAATGTTGCTTCTTTGTA
TCATCTGATACCAGCTATACACAAGAACATATGTCACAGTAGCCAAAACTAGGACTGTAATATGATGCCTATTTTGCACC
AAAGAGGGTCAGTAACCCCAATGGTCCCTGTAGGAAATTATTGAACATATATCTGAGGTAAAGAATATTGCAGTGTTGTC
ACTTGTAAGGTTATTGATGTTTGTCTATTGACTTTAAGTAGTGGATTGAGAATCCTAGGCAGGTGATTGTCAGATCAGCC
AATTCGCACTCC--TTATTTTGATTGCGTTAGGATGGAATAACTTGCCTGAGAAGTAAAACTTAGAAGG-----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------TATTATGTGAATGTGCCA
ACTGTTTACACGCTCCTACAGCCAAAAATCCTGGGATTAGCATCTCATAGTGAATCTGCACCTTCATCCCTAATCCTGGG
GAATTCAACTAGGAATGGACACAAATCTAGAAGCCTACAGTCTCACTGACGCTTTCCGGACGTCCCTCTCATGTCGCCTC
CCACCATTTTCTCGAGTTCT-------CCTCCCAGTCAGACTAACTCAACTCAAATCATTTACCTCAGAAAGAAAAGAAA
AGAAAACTCAACTCACCCCCTTGATTCGCTCATATGTTCATCTTCCTCAATCAACATGGCTGCTGGAATGTTTTTGCTTG
CCCCTTGGTGGCAATTTTGTATTTTTAGAGCATGTTTGGTTACCC-TCCGGACTTTGCCACACTTTTGTCCCACAAGTGT
GGCATTCCACATTTTTTGTGGTGGCCAAATTGGTTGCCACACTTGTGGCAGAAGTTGGCTAGTAACCAAGTCCATGACAA
-------GTGAGGTATCTGACTAAAAGAAGTGTGGCATGCCATAACTGTGGCTACAACTAAACACTTGCCACAC
>chr6B_1
AACCCAAAGAGAGCGTCCAACATGCGATATGTGGTGTCGGCTGGATGCATCACTTGGCGTGCTCTCAGCCCA-AAAAAGG
ACCCTTGTGGTTCCTGCTAGGGCT--------------------------------------------------------
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-------------------AACCTTTAGTGTTTTGTTTTTAATAGTTTAGATTGCTTACCACATGTGTCACATGATGAGG
ACTAACCTTTAGTTAATTGCTCTCGCAAGTCTAATTGAAATTTTTGTACCGTATACTTGCTTGTTTT--TAAGCCGAAAT
GAAGCCTGTCTTTAAAAAAACCGAAACGAAGCCTAATCAAAAAAGATCCAGCCCAACATCCAAATAG---TCCTATAGCC
CAGAACACAATGATGGGCCGACAGGCTAACGTTTCGTGGCCCTTACGAAACGAGAGTTTTTTAGAGCCCTCGCCGCATCT
CTGAAGAGGCAGACCGCAAAACGAAAGGACGCCGCCGGCCCTAGTTCGTTGCAGTGCCTCGCCTCTGCAGTCTCCACCAC
ACGGACTTGCCACCATGACGACGGCGGCCCCTCTTTTATCGTTGACGGATGCGGCGACGGT------GACGGCGGCGCTA
GCCCCCGGCAGAGCGCCCACCAGAGCCCGCATTCAGGCCGCCCCCCGCCACCACGCCACCGTCTCGCTGAGATGCCACCG
CGCTCGGCCCCTAACCGCGGCCGCCGCCACGGGCGACTCGCCGTCGTCCGCCGCGTTCCACGGCGAGTGCTTCGTCGTCG
GGGACAACATCGACACCGACCAGATCATCCCGGCCGAGCACCTGACCCTGGTGCCGTCCAAGCCCGACGAGTACCGCAAG
CTTGGCTCCTTCGCCTTCGTGGGCCTCCCCTCCGCGGCCTACCCGATTCCCTTCGTGGCCCCAGGCGAGGAGTCGTCCCG
CTACGCCGTCATCATCGGCGGCGCCAACTTCGGGTGCGGCTCCTCCCGCGAGCACGCGCCCGTCGCGCTCGGAGCCGCCG
GCGCGCGCGCAGTTGTGGCCGAGGGCTACGCCCGCATCTTCTTCCGCAATTCCGTGGCTACAGGGGAGGTGTACCCCCTG
GAGCTCGCGGACAGCGGTGCCAGCAAGGAGTGCAAGACCGGGGATGTGGTCACAGTGGACCTCGATAACTCGGTCTTGAT
TAACCACACATCCGGCAAGCAGTACAAGCTGAAGCCTATTGGTGATGCAGGCCCGGTTATTGAGGCCGGGGGGATCTTCG
CTTATGCTCGGAAGACTGGAATGATTGCGTCCAAATCTGCGTGAACAAAAAGTGAGTCTTCTTCTACCCCATTTTAAGCC
ACAGG-GTTTTCAACATTGTTGATTCGAATTGGTGCTGTGCTTTGTGTGTTACTATGATGCGAACCTGAGATTATTACAT
ATTTAGACGAACATCAGTTTTCTGCCAG----------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------AACTAGGATTATAAGATGATGCCTATTTTGCACC
AAAGAGGGTCAGTAACCCCAATGGTCCATGTAGGAAATTATTGAACGGTGGATCA-------------------------
------------------------------------------------AGAATCCTAGGCAGGTGATTGTCAGATGAGCC
AATTTAGCACTCATTTATTTTGATTGCGCTAGAATGGAATAACTTACTTGAAAAGTTAAATTCAAAAGGTTATTTATTGA
AGTCAATCTGATGCTATGTTGTTTTGTTGGTCGCGAGATCTTATGGGTTTCACCTCTGCCTACCCCAACTTGTTTGGGAC
TAAAGGCTTAGTTGTTGTCGTATATGAAGTCAATCTGAGTTGTGAAAGGTTCAATTTCTGCATCAGTTTTGAATATTCAT
TTAACCTCATTATCTTTGTTCTTCCCAAAATATACCTAAATAACCCATCCATCGATCAAACATATCATGTGGATGTGATA
ACTGTTTACATGCTCCTACAGCCAAAAATCCTGGGATCAGCATCCCATAGTAAATCTGCACCCTCATCCTTAATCCTGGG
GAATTCAAGTAGCAATGGACATAAACCTAGAAGCCTACAGCCTCACTGGCGCTTTTGGGGTGTGCCTCCTACCTTGCCCC
CCACTGTTTTCTCAAGTTCTGCTTTCTCCTCCCGGCCAGATTAACTCAACTCAAACCATTTCCCTCA------AAAAGGA
AAAAAAATCAATTCA-CCCGCTGATTCGCTCATATCCTCATCTAACTCGATCA---TGTCTCCTGGTTTATTTTTGTTTG
CTCCTCGGTGGCAATTTTGTATTTTTTGTGCATGTTTGGTTACTC-TCTGGACTTTGCCGCACTTTTGTGCCACA-----
-GCATGCCACAGTTTTTGTGGCGGCCAAATTGGTCGCCACACTTGTCGCAGAAGTTGGCTAGCAACTAATTCATTGACAA
TTTACAAGTGAGGTATGTGATTAAAAGAAGTGTGGCATGCCATAACTG----TACAACCAAACAATTGCCACAC
>chr6D_103
CTTTT---------------------------------------------------------------------------
----------------------------TTTTGCGGGTACAAATTTGTATTACTCAAGACCTCAAGTCATTACAGTCCAT
TGCAGCCAACTCCAAAGCATCTGGAGGTCACGAACCAAGCCAAGTCATGGTTCTACCCTCACCACGAGCAAAATATGCTA
AACTATCACTAACTTTATTTTGGCTACGATTTACATGAGTAATACAAAAATCACGGAGGGACAAAAGATATTTAATCTCC
TTGATGATGGACGAGTAAACCGATCTATCAATATCTGAAGCTTGAATCAATTTTACTGCCATTAGGGAGTCCATCTCAAC
CTGCACGGGCAAGTCGCTCCTCTGGATAGAAAAGGATAGACCTTCCATGCATGCACATAGCTCAGCTTCGAGCGCGTCCC
GACAGTGAAACAATTGCCTACAGGAAGAGAAAATGATGGCACCCCTGTCATCCCTTAACACCATACCTGCACCAGCCGAT
CCATCCTCTGCAAAGGAACCGTCAGTATTTAGCTTGACAAAGCCAAAGCTTGGAGCAGCCCACTTGGGGTCTGTACTTTT
GTCCTTAAGAGGTCAAGTTGCTCCATATAACATCAGGGATTTTCCCTTGGAAGGTTAAGCAACAAGATTAGATTTAATGC
CAATGAGAGAGTCCAGGTAACTCGTCAAAAATCTGCGTGAAACTTCCATGGGTGGCGGGGCTTTGTTATGAACAATCTCG
T-------------------------------------------------------------------------------
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>chr5B_103
CTTTT-T-------------------------------------------------------------------------
-----------------------------TTTGCGGTTAGAAATTTGTATTACTCAAAGCAACAAGTCCTTACAATCCAT
CGCAGCCAACTCCAAAGCATCTGGAGGTCCCGAACCAAGCCAAGTCATGGTTCTACCCTCGCTGCGAGCAAAATATGCTA
AACTATTACTAACTTTATTTTGGCTACGATTAACGTGAGTAATACAAAAATCACGAAGGGACAAAAGATATCTAATCTCC
TTGATGATGGACGAGTAGACCGATCTATCAATATCTGAAGCTTGAATCGATTTTACTGCCATTAGGGAGTCCATCTCAAC
CTGCACTGGCAAGTCGCTT-TCTGGATAGAAAATGATAGACCTTCCATGCATGCACATAGCTCAGCTTCGAGCGCGTCCC
GACAGTGAAACAATTGCCTACAGGAAGAGAAGATGATGGCACCCCTCTCATCCCTTAACACCATACCTGCACCAACCGAG
CCATCCTTAGCAAAAGAACCGTCAGTGTTTAACTTGACAAATCCAACGCTAGGAGCAGCCCACTTGGGGTCTGCACTTTT
GTCCATAAGAGGCCGAGTTGCTCCATATAATATCAGGGATTTTCCTTTGGACGGTTCAGCGGCAAGATTAGACTTTATGC
CAATGATAGAGTCTAGATAGCTCGTCAAAAATCTGCGTGAAACTTCCATGGGTGGCGGGGCTTTGTTGTGAACAATCTCG
T-------------------------------------------------------------------------------
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>chr5B_103
CTTTTTT-------------------------------------------------------------------------
-----------------------------TTTGCGGGTAGAAATTTGTATTACTCAAAGCATCAAGTCCTTACAATCCAT
CCCAGCCAAGTCCAAAGCATCTGGAGGTTCCAAACCAAGCCAAGTCATGGTTCTACCCTCACTATGAGCAAAATATGCTA
AACTATCACTAACTTTATTTTGTCTACGATTAACATGAGTAATACAAAAATCACAAAGGGGCAAAAGATATCTAATCTCC
TTGATGATGGACGAGTAGACCGATCTATCAATATCTGAAGCTTGAATCAATTTTACTGCCATTAGGGAGTCCATCTCAAC
CTGCACTGTCAAGTCGCTTCTCTGGATAGAAAATGATAGACCTTCCATGCATGCACATAGCTCAGCTTCGAGCGCGTCCC
GACAGTGAAACAATTGCCTACAGGAAGAGAAGATGATGGCACCCCTCTCATCCGTTAACACCATACCTGCACCAGCCGAG
CCATCCTCAGCAAAAGAACCATCAGTGTTTAACTTGACAAATCCAATGCTAGGAGCAGCCCACTTGGGGTCTGCACTTTT
GTCCATAAGAGGCCGAGTTGCTCCATATAATATCATGGATTTTCCTTTGGACGGTTCAGCGGCAAGATTAGACTTTATGC
CAATGATAGAGTCCAGGTAGCTTGTCAAAAATCTGCGTGAAACTTCCATGGGTGGCGGGGCTTTTTTGTGAACAATCTCG
T-------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr3D_103
CTTTTTT-------------------------------------------------------------------------
-----------------------------TTTGCGGGTAGAAATTTGTATTACTCGAAGCATCAAGTCCTTACAATCCAT
CGCAGCCAACTCCAAAGCAACTGGAGGTCCCGAACCAAGCCAAGTCATGGTTCTACCCTCGCTACGAGCAAAATAAGCTA
AACTATCACTAACTTTATTTTGGCTACGATTAACATGAGTAATACAAAAATCACGAAGGGACAAAAGATATCTAATCTCC
TTGATGACGGACGAGTAGACCGATCTATCAATATCTGAAGCTTGAATCAATTTTACTGCCATTAGGGAGTCCATCTCAAC
CTGCACTAGCAAGTCGCTTCTTTGGATAGAAAAGGATAGACCTTCCATGCATGCACATAGCTCAGCTTCGAGCACGCCCC
GACAATGAAACAATTGCCTACAGGAAGAGAAAATGATAGCACCCCTCTCATCCCTTAACACCATACCTGCATCAGCCGAG
CCATCCTCTGCAAAAGAACCGTCAGTGTTTAACTTGACAAATCCAGCGCTAGGAGCAGCCCACTTGGGGTCTGCACTTTT
GTCCATAAAAGGCCGAGTTGCTCCATATAATATCAGGGATTTTCCTTTGGACGGTTCAGCGGCAATATTAGACTTTATGC
CAATGAGAGACTCCAGGTAGCTCATCAAAAATCTGCGTGAAACTTCCATGGGTGGCGGGGCTTTGTTGTAAACAATCTCG
T-------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr6A_104
-TTTT-T-------------------------------------------------------------------------
-----------------------------TTTGCGGGTAGAAATTTGTATTACTCAAAGCATCAAGTCCTTACAATCCAT
CGCTGCCAACTCCAAAGCATCTGGAGGTCCCGAACCAAGCCAAGTCATGGTTCTACCCTCGCTACAAGCAAAATATGCTA
AACTATCACTAAATTTATTTTGACTACGATTAACATGAGTAATACAAAAATCACGAAGGGACAAAAGATATCTAATCTCC
TTGATGATGGACGAGTAGACCGACCTATCAATATCT--AGCTTGAATCAATTTTACTGCCATTAGGGAGTCCATCTTAAC
CTGCACAGGCAAGTCGCTTCTTTGGATAGAAAATGATAAACCTTCCATGCATGTACATAGCTCAGCTTCGAGTGCGTCCC
GACAGTGAAACAATTGCCTACAGGAAGAGAAGATGATGGCACCCCTCTCATCCCTTAACACTATACCTGCACCAGCCGAG
CCATCCTCAGCAAAGGAACCGTCAGTGTTTAACTTGACAAATCCAACGCTAGGAGCAGCCCACTTGGGGTATGCA-----
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--------------------------------------------------------------------------
>chr3A_104
TTTTCT--------------------------------------------------------------------------
----------------------------TTTTGCGGGTAGAAATTTGTATTACTCAAAACCTCAAGTCCTTACAATCCAT
CGCATCCAACTTCAAAGCATCTGGAGGTCCCGAACTAAGCCAAGTCATGGTTATACCCTCGCTACGAGCAAAATATGCTA
AACTATCACTAACTTTATATTGACTACGATTTACATGAGTAATACAAAAATCATGAAGGGACAAAAGGTATCTAATCTCC
TTGATGATGGACGAGAAAACCGATCTATCAATATCTAAAGCTTGAACCAATTTTACTGCCATTAGGGAGTCCATCTCAAC
CTGCACTGGCAAGTCGCTTCTCTGGATAGAAAAAGATAGATCTTCCATGCATGCACATAACTCAGCTTCAAGCGCGTCCC
GACAGTGAAATAGTTGCCTACAGGAAGAGAAAATGATGGCACCCCTCTCATCTCTTAACACCATACCTGCACCAGCCGAG
CCATCCTCTGCAAATGAGCCGTCAGTATTTAACTTGACAAAGCCAGAGCTAGGAGCAGCCCACTTGGGGTCTGCACTCTT
GTCCATAAGAGGCCGAATTGCTCCATATGACATCAGGGACTTTCCCTTGGAAGGATCAGCAGCAAGATTAGATTTTATGC
CAATGAGAGAGTCCAGGTAACTCGTCAAAAATCTGCGTGAAACTTTCATGGGTGGCGGGGCTTTGTTGTGAACAATCTTG
T-------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr4A_104
--------------------------------------------------------------------------------
-----------------------TTTTTTTTTGCGGGTAGAAATTTGTATTACTCAAAGCATCAAGTCCTTACAATCCAT
CACTGCCAACTCCAAAGCATCTGGAGGTCCCGAACCAAGCCAAGTCATGGTTCTACCCTCGCTACGAGCAAAATATGCTA
AACTATCACTAACTTTATTTTGGCTACGATTAACATGAGTAATACAAAAATCACGAAGGGACAAAAGATATCTAATCTTC
TTGATGACGGACGAGTAGACCGATCTATCAATATCTGAAGCTTGAATCAATTTTACTGCCATTAGGGAGTCCATCTCAAC
CTGCACAGGCAAGTCGCTTCTCTGGATAGAAAATGATAAACCTTTCATGCATGCACATAGCTTAGCTTCGAGTGCGTCCC
GAAAGTGAAACAATTGCCTACAGGAAGAGAAGATGATGGCACCCCTCTCATCCCTTAACACCATACCTGCACCAGCCGAG
CCATCCTCAGCAAAGGAACCGTCAGTGTTTAACTTGACAAATCCAACGCTAGGAGCAGCCCACTTGGGGTCTGCACTTTT
GCCCATAAGAGGCCGAGTTGCTCCATATAATATCAGGGATTTTCCTTTGGACGATTCAGCAGCAAGATTAGATTTTATGC
CAATGATAGAGTCCAGGTAGCTCGTCAAAAATCTGCGTAAAACTTCCATGGGTGGCGGGGCTTTGTTGTGAACAATCTCG
T-------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr4A_104
--------------------------------------------------------------------------------
-----------------------TTTTTTTTTGCGGGTAGAAATTTGTATTACTCAAAGCATCAAGTCCTTACAATCCAT
CGCTGCCAACTCCAAAGCATCTGGAGGTCCCGAATCAAGCCAAGTCATGGTTCTACCCTCGCTACGAGCAAAATATGCTA
AACTATCACTAACTTTATTTTGGCTACGATTAACATGAGTAATACAAAAATCACGAAGGGACAAAAGATATCTAATCTCC
TTGATGATGGATGAGTAGACCGATCTATCAATATCTAAAGCTTGAATCAATTTTACTGCCATTAGGGAGTCCATCTCAAC
CTGCACAGGCAAGTCGCTTCTCTGGATAGAAAATGATAAACCTTCCATGCATGCACATAGCTCAGCTTCGAGTGCGTCCC
GACAGTGAAACAATTGCCTACGGGAAGAGAAGATGATGGCACCCCTCTCATCCCTTAACACCATACCTGCACCAGCCGAG
CCATCCTCAGCAAAGGAACCGTCAGTGTTTAACTTGACAAATCCAACGCTAGGAGCAGCCCACTTAGGGTCTGCACTTTT
GTCCATAAGAGGCCGAGTTGCTCCATATAATATCAGGGATTTTCCTTTGAACGATTCAGCACCAAGATTAGACTTTATGC
CAATGATAGAGTCCAGGTAGCTCGTCAAAAATCTGCGTGAAACTTCCATGGGTGGCGGGGCTTTGTTGTGAACAATCTC-
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>chr5A_109
--------------------------------------------------------------------------------
----------------------------TTTTGTAGGTAGAAATTTGTATTACTCAAAACCTCAAGTCCTTACAATCCAT
CGCAGCCAAATTCAAAGCATCTAGAGGTCTCGAACCAAGCCAAGTCATGGTTCTACCCTCGCTACGAGCAAAATATGCTA
GACTATCACTAACTTTATTTTGGCTATGATTTACATGAGTAATACAAAAATCACAAAGGGACAAAAGATATCTAATCTCC
TTGATGATGGACGAGTAAACCGATCTGTCAACATCTGAAGCTTGAATCAATTTTACTGCCATTAGAGAGTCCATCTCAAC
CTGCACTGGCAAGTTGCTTATCTAGATAGAAAAGGATAGGCCTTCCATGCTTGCACATAGCTCAGCTTCGAGCGCGTCCC
GATAGTAAAAGAGTTGCCTACAGGAAGAGAAAATGATGGCATCCCTCTCATCTCTTAACACCATACCTGCACCAGCCAAG
CCATCCTCTGCAAATGAGCCGTTGGTATTTAATTTGACAAAGCCAGAGCTAGGAGCATCCCACTTGGGGCCTGCACTCTT
GACCACATGTGGTCGAAGTGCACCATATGACATCAGGGACTTTCCCTTGGAAGGATCAGCATCAAGTTTAGTCTTTATGC
CAACTAGAGAGTCCAGGTAACTCATCAAAATTCTGCGTGAAACTTCCATGGGTGG-GGGGCTTTGTTGTGAACAATCTCG
T-------------------------------------------------------------------------------
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>chr6A_880
--------------------------------------------------------------------------------
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-CTAATCTTTAGTTAGTTGCTCCTGCAAGTCTAATTGAAATATCTGTACTGTATACTTGGTTGTTTTTGTAAGCCGAAAT
GAAGCCTGTTTTTTTTTT-AACGAAATGAAGCCTAATAAAAGAAGAACTAGCCCAACATCCAAATAGTCCTCCTATGACC
CAGAACACAGTGATGGGCCGACAGGCTAACGTTTCGTGGCCCTTACGAAACGAGAGCTTTTTAGAGCCCTCGCCGCATCC
CCGAAGAGGCAGACCGCAAAACGAAAGCAAGCCGCCGGCCCTAGTTCGTTTCAGTGCCTCGCCTCTGCAGTCTCCACCAC
ACGGACTTGCCACCATG---ACGGCGGCTCCTCTGTTATCGTTGACGGATGCGGCGACGGCGACGGCGACAGCGGTGCTG
GCCCCGGGCCGAGCGCCCGCCAGAGCCCGCATTCAGGCCGCCCCCCGCCACCCGGCCACCGTCTCGCTGAGATGCCACCG
CGCGCGGCCCCTAACCGCGGCCGCCGCCGCGGGCGACTCGCCGTCGTCCGCCGCGTTCCACGGCGAGTGCTTCGTCGTCG
GGGACAACATCGACACCGACCAGATCATCCCGGCCGAGCACCTGACCCTGGTGCCGTCCAAGCCCGACGAGTACCGCAAG
CTCGGCTCCTTCGCCTTCGTGGGCCTCCCATCCGCGGCCTACCCGATCCCGTTCGTCGCCCCCGGCGAGGAGTCGTCCCG
CTACGCCGTCATCATCGGCGGCGCCAACTTCGGGTGCGGCTCCTCCCGCGAGCACGCGCCCGTCGCGCTCGGAGCCGCCG
GCGCGCGCGCCGTTGTGGCCGAGGGCTACGCCCGCATCTTCTTCCGCAATTCAGTGGCCACCGGGGAGGTGTACCCCCTG
GAGCTCGCGGACAGCGGTGCCAGCAAGGAGTGCAAGACCGGGGATGTGGTCACAGTGGACCTCGATAACTCGGTCTTGAT
TAACCACACATCCGGCAAGCAGTACAAGCTGAAGCCTATTGGTGATGCAGGCCCGGTTATTGAGGCCGGTGGGATCTTCG
CTTATGCTCGGAAGGCTGGAATGATTGCGTCCAAATCTGCGTGAACAAAAAGTGAGTATTCTTCTACCGCATATTAAGCC
ACATGAGTTTAAAACATTGTTAATTCGAATTGGTGATGTGTTCTGTGTGTGACTATGACGCGAACCTAAGGTTATCACAT
GTTCAGAAGAACATTCGTTTTCTGCCAATACGATTAGGTGAACCTTTATCTTGAAATAAGTGTTTCGTTCAGTTGATCAT
GTAAGCAGGCAATAAACACCTCCCTTTGAGAGGTTTGTCTAACTAGTAGACTAGTAGAAACATATGCTTGAGCCATATGG
ATCTTGCTTTTGATTCTTACGGTATAATAGTTGCACGCCTTGTTAAGTACTGCATCTGTATGCAATGTTGCTTCTTTGTA
TCATCTGATACCAGCTATACACAAGAACACATGTCACAGTAGCCAAAACTAGGACTGTAATATGATGTCTATTTTGCACC
AAAGAGGGTCAGTAACCCCAATGGTGCCTGTAGGAAATTATTGAACATATATCTGAGGTAAAGAATATTGCAGTGTTGTC
ACTTGTAAGGTTATTGATGTTTGTCTATTGACTTTAAGTAGTGGATTGAGAAACCTAGGCAGGTGATTGTCCGATCAGCC
AATTCGCACTCC--TTATTTTGATTGTGTTAGAATGGAATAACTTACCTGAAAAGTAAAACTTAGAAGG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------TATTATGTGAATGTGACA
ACTGTTTACACGCTCCTACAGCCAAAAGTCCTGGGATTAGCATCCCATAGTGAATCTGCACCTTCATCCCTAATCCTGGG
GAATTCAACTAGGAATGGACACAAACCTAGAAGCCTACAGTCTCATTGACGCTTTCTGGACGTCCCTCTCATGTCGCCTC
CCACCATTTTCTCAAGTTCT-------CCTCCCAGTCAGACTAACTCAACTCAAATCATTTACCTCAGAAAGAAAAGAAA
AGACAACTCAACTCACCCCCTTGATTCGCTCATATGTTCATCTTCCTCGATCAACATGGCTGCTGGAATATTTTTGCTTG
CCCCTTGGTGGCGATTTTGTATTTTTAGAGCATGTTTGGTTACCCTTCCGGACTTTGCCACACTTTTGTCCCACAAGTGT
GGCATTCCACATTTTTTGTGGTGGCCAAATTGGCCGCCACACTTGTGGCAGAAGTTGGCTAGCAACCAAGTCCATGACAA
-------GTGAGGTATCTGACTAAAAGAAGTGTGGCATGCCATAACTGTGGCTACAACCAAACGCTTGCCACAC
>SNPs
------S--S-----------------S-----SS---S---S---------------------------S-S-------
---------------------------S----------------------------------SS----------------
------------------------------------------------------------------------------S-
---------------------S----------------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------S--------------------S--------------------
--------------------------------------------------------------------------------
-------S-----------S--------------------------------S-----------S---------------
------------------------------------------------------------S-------------------
-------------------------------------------------------S------------------------
-SSSSSSSSSSSSSSSSSS-------------------------------------------------------S-----
S-----SS--------------------------------S--------------------------S------------
--------------------------------------S----------------------S------------------
----------S---------------------------------------------------------------------
-S------------S--------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------S-----------------------------------------
---------------S----------------------------------------------------------------
-------------------S-----S--------------S--------------------------S----------S-
----S------------------------------------------------------------S--------------
----------S----------------S-S-----S--SS----------------S-------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S------------S-----S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------S-----------------------------------
-------------------------S------------------------------S-----------------------
-------------S------------------------------------------------------------------
------------------------------------------------S--------------------S----------
--------------------------------------------------------------------------------
----------------------------------S---------------------------S-----------------
----------------------------------------------------------S---------------
>forward_625
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------AAGCTAGAAGCAGCCCACTC---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>reverse_1946
--------------------------------------------------------------------------------
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-------------------------CGCGTCCAAATCTGCTTGAA-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>forward_887
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GTCACATGGTGAGG
CCTAACT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>reverse_3017
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------CGGACGTCCCTCTCATGTC-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
